View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11819_low_4 (Length: 721)

Name: NF11819_low_4
Description: NF11819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11819_low_4
NF11819_low_4
[»] chr8 (16 HSPs)
chr8 (12-505)||(7956226-7956717)
chr8 (15-302)||(44223215-44223503)
chr8 (44-302)||(17722330-17722596)
chr8 (40-303)||(35948826-35949097)
chr8 (542-667)||(7956758-7956883)
chr8 (95-302)||(3767625-3767832)
chr8 (12-303)||(9040426-9040718)
chr8 (58-302)||(25456064-25456308)
chr8 (152-298)||(34760832-34760979)
chr8 (58-209)||(25808217-25808368)
chr8 (84-251)||(9505077-9505244)
chr8 (58-251)||(16570794-16570987)
chr8 (225-298)||(20860427-20860500)
chr8 (76-258)||(32321853-32322035)
chr8 (662-703)||(7956934-7956975)
chr8 (466-506)||(7956644-7956684)
[»] chr1 (14 HSPs)
chr1 (12-303)||(16584750-16585051)
chr1 (20-259)||(1161327-1161565)
chr1 (12-298)||(8083990-8084290)
chr1 (12-303)||(11619933-11620216)
chr1 (101-300)||(25785763-25785962)
chr1 (59-300)||(18461120-18461362)
chr1 (22-259)||(42009880-42010102)
chr1 (58-251)||(11911646-11911839)
chr1 (30-109)||(25787286-25787365)
chr1 (428-470)||(34148499-34148541)
chr1 (250-298)||(32678554-32678602)
chr1 (227-302)||(4919491-4919566)
chr1 (269-302)||(33857601-33857634)
chr1 (269-302)||(33923289-33923322)
[»] chr2 (12 HSPs)
chr2 (12-259)||(31111466-31111713)
chr2 (20-300)||(13852163-13852453)
chr2 (58-298)||(4638168-4638417)
chr2 (17-302)||(36009179-36009462)
chr2 (12-299)||(38606980-38607275)
chr2 (12-302)||(37630343-37630634)
chr2 (12-259)||(29109042-29109295)
chr2 (213-302)||(27866622-27866710)
chr2 (15-259)||(5526270-5526519)
chr2 (154-258)||(3919883-3919987)
chr2 (222-273)||(10721926-10721977)
chr2 (254-303)||(12894051-12894100)
[»] chr7 (12 HSPs)
chr7 (14-302)||(7352258-7352555)
chr7 (14-302)||(46993258-46993552)
chr7 (20-302)||(39695087-39695370)
chr7 (25-302)||(7994955-7995234)
chr7 (124-257)||(11727326-11727449)
chr7 (59-259)||(46265238-46265436)
chr7 (12-302)||(3996825-3997128)
chr7 (79-231)||(2197623-2197775)
chr7 (14-257)||(48070669-48070918)
chr7 (249-302)||(27227036-27227089)
chr7 (95-302)||(31136158-31136357)
chr7 (58-171)||(35738067-35738178)
[»] chr4 (11 HSPs)
chr4 (12-259)||(28319176-28319423)
chr4 (14-303)||(23107789-23108098)
chr4 (19-259)||(24466202-24466448)
chr4 (85-251)||(4413515-4413681)
chr4 (12-302)||(42141257-42141545)
chr4 (100-259)||(8606106-8606265)
chr4 (58-298)||(53393087-53393337)
chr4 (222-297)||(13207472-13207547)
chr4 (84-208)||(8056816-8056939)
chr4 (58-148)||(19682001-19682091)
chr4 (253-302)||(39839104-39839153)
[»] scaffold0879 (1 HSPs)
scaffold0879 (19-259)||(467-713)
[»] chr5 (6 HSPs)
chr5 (40-259)||(19947761-19947980)
chr5 (62-253)||(16746357-16746548)
chr5 (20-302)||(31895896-31896181)
chr5 (136-302)||(16746550-16746726)
chr5 (61-258)||(1498129-1498326)
chr5 (234-292)||(41092105-41092163)
[»] chr3 (10 HSPs)
chr3 (59-251)||(46655576-46655768)
chr3 (12-299)||(44471020-44471323)
chr3 (84-259)||(11503284-11503459)
chr3 (175-257)||(30554588-30554670)
chr3 (15-257)||(44681881-44682129)
chr3 (213-259)||(46892657-46892703)
chr3 (161-257)||(779533-779629)
chr3 (12-302)||(26757593-26757901)
chr3 (20-143)||(46892755-46892884)
chr3 (95-303)||(22240516-22240724)
[»] scaffold0565 (1 HSPs)
scaffold0565 (14-295)||(1729-2013)
[»] scaffold0070 (2 HSPs)
scaffold0070 (58-302)||(13756-14000)
scaffold0070 (255-302)||(33729-33776)
[»] chr6 (8 HSPs)
chr6 (58-245)||(11846307-11846494)
chr6 (12-232)||(9826817-9827043)
chr6 (12-131)||(1208739-1208864)
chr6 (12-59)||(5416284-5416331)
chr6 (153-259)||(23301464-23301570)
chr6 (175-303)||(23585862-23585990)
chr6 (16-59)||(2453993-2454036)
chr6 (14-60)||(26186588-26186634)
[»] scaffold0002 (1 HSPs)
scaffold0002 (237-303)||(344452-344518)
[»] scaffold0564 (1 HSPs)
scaffold0564 (155-257)||(6366-6472)


Alignment Details
Target: chr8 (Bit Score: 403; Significance: 0; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 12 - 505
Target Start/End: Original strand, 7956226 - 7956717
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaa 111  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7956226 tgagatgaatatgagagaaagagaatgtattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaa 7956325  T
Q  112 taaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcga 211  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7956326 taaggagtatggttatcatcggattggttcatcggtttcacatatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattggttcga 7956425  T
Q  212 atcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacacccctacgtgtactt 311  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  7956426 atcggtttcaaaccaaacaaagcaaggtcgaatattttttcggtttggactttcggtttcgttggttttgtccgaaccacttacacccctacgtgtactt 7956525  T
Q  312 gttgtagatcaaaagtgtcaaaataatacgaataaaattaatcattcaagttataaaactttctttcatgtttgtactaagtacgtactaactttcaatt 411  Q
    || ||||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7956526 gtcgtagatcaaaagtgtcaaaataagacacataaaattaatcattcaagtgataaaactttctttcatgtttgtactaagtacgtactaactttcaatt 7956625  T
Q  412 tggagtacgtagttaaatatattattagagtagttaaacatgaaaatatacccaattattagagtagttaaatgtgaaaatatacccaattatt 505  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7956626 tggagtatgtagttaa--atattattagagtagttaaacatgaaaatatacccaattattagagtagttaaatgtgaaaatatacccaattatt 7956717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 44223215 - 44223503
Alignment:
Q  15 gatgaagatgagagaaagtgaatgaattaaaaaa-tattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaata 113  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  44223215 gatgaagatgagagaaagtgaatggattaaaaaagtattttatgtttaattttgggcctaaccataagtttgtgtgaggtaggataatatttgtaaaata 44223314  T
Q  114 aggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaat 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||  ||    
T  44223315 aggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaatcatgaaccaaaccaaactagattggtttcgattggttcagat 44223414  T
Q  214 cggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||| |||| ||||||| |||| ||  |||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  44223415 cggttttaaactgaaccaaacaagatcatatattttttcggtttggactttcggtttcgttggttttgtccgaaccacttacaccccta 44223503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 44 - 302
Target Start/End: Original strand, 17722330 - 17722596
Alignment:
Q  44 aaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtagga--------taatattagtaaaataaggagtgtggttatcatcggat 135  Q
    |||| |||||||||||||||||||||| ||||||| ||| ||||||||||||||        ||||||||||||| ||| ||||||||||||||||||||    
T  17722330 aaaattattttatgtttaattttgggcctaaccatgagtatgtgtgaggtaggaatttatgataatattagtaaagtaatgagtgtggttatcatcggat 17722429  T
Q  136 tggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagca 235  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||||||||| ||    
T  17722430 tggttcatcggtttcacagatctcgaaatgaaaaatcatgaaccaaaccaaactagatcggtttcgattagttcggattggtttcaaaccgaaccaaaca 17722529  T
Q  236 aggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||| | ||||||| |||||||||||    
T  17722530 aggttggatatttttccggtttggactttcggtttcattggttttatccgaaccatttacaccccta 17722596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 40 - 303
Target Start/End: Complemental strand, 35949097 - 35948826
Alignment:
Q  40 attaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggt 139  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  35949097 attaaaaagtattttatgtttaattttgggcctaaccataagtttgtg--aggtaggataatattagtaaaataaggaatgttgttatcatcggattggt 35949000  T
Q  140 tcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggt 239  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| ||| || || |||| ||||||||||||||||||||| ||| ||    
T  35948999 tcatcggtttcatggatctcgaaatgaaaaaccatgaatcaaaccaaactagatcgattttgaatgattcggatcggtttcaaaccgaaccaaacaaagt 35948900  T
Q  240 cggatatttt----------ttcggtttggactttcgatttcattggttttgtacgaaccacttacacccctac 303  Q
    ||||||||||          |||  |||||||||||| |||| |||||||||| |||| |||||||||||||||    
T  35948899 cggatatttttttgttttggttcaatttggactttcgttttcgttggttttgtccgaaacacttacacccctac 35948826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 542 - 667
Target Start/End: Original strand, 7956758 - 7956883
Alignment:
Q  542 ctttctttgtggtgaaaagtttagatgagttgaatttaaatgaagttcatcaaggtcatgacaggttttaaggtttaaagaaagttggtagaggtaatta 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7956758 ctttctttgtggtgaaaagtttagatgagttgaatttaaatgaagttcatcaaggtcatgacaggttttaaggtttaaagaaagttggtagaggtaatta 7956857  T
Q  642 catattattcatcagtaatgtcctta 667  Q
    |||||||| |||||||||||| ||||    
T  7956858 catattatccatcagtaatgttctta 7956883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 95 - 302
Target Start/End: Original strand, 3767625 - 3767832
Alignment:
Q  95 ggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatc 194  Q
    ||||||||||| ||||||  |||||| ||||| |||||| | ||||||||||||    ||||||| |||| |||||||  ||||||||||||| ||||||    
T  3767625 ggataatattactaaaatggggagtgaggttagcatcggttcggttcatcggttcattggatctcaaaataaaaaaccgagaaccaaaccaaactagatc 3767724  T
Q  195 ggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccactta 294  Q
    ||||| ||||||||||  |||||||  |||||||| || |||||||||||| |||||||||||||| ||||| |||||| |||||||| |||||||||||    
T  3767725 ggtttagattggttcggttcggttttgaaccgaactaaacaaggtcggatactttttcggtttggattttcggtttcatcggttttgtccgaaccactta 3767824  T
Q  295 caccccta 302  Q
    ||| ||||    
T  3767825 cactccta 3767832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 9040718 - 9040426
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    ||||||||  ||| |||||||||||||||||||  | |||||||| ||      |||||||| || ||| ||||||| |||||||||  |||||||| ||    
T  9040718 tgagatgataatgggagaaagtgaatgaattaagtagtattttatcttgagctttaattttgagcctaatcataagtgtgtgtgaggagggataataata 9040619  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
    |||||||  | |||| ||||| ||||   | ||||||||||||||   |||||| ||||||||||||  |||||||||||||  |||||||||| |||||    
T  9040618 gtaaaatgggaagtggggttagcatcaactcggttcatcggtttcttagatctcaaaatgaaaaaccgagaaccaaaccaaacaagatcggtttagattg 9040519  T
Q  206 gttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacacccctac 303  Q
    ||     |||||||  |||| | | | |||||||||||||  |||||||||||||||||||||||||| |||||| | |||||| |||| ||||||||    
T  9040518 gt-----tcggttttgaacctatcaaggcaaggtcggatacattttcggtttggactttcgatttcatcggttttatccgaaccgcttatacccctac 9040426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 58 - 302
Target Start/End: Original strand, 25456064 - 25456308
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    ||||||||||||||||  ||||||| ||||||| |  |||||||| |||||||||  |||||| ||||| |||| | | | |||||||||||   |||||    
T  25456064 tttaattttgggcatactcataagtgtgtgtgaagagggataataatagtaaaatggggagtgaggttagcatcagttcgattcatcggtttattggatc 25456163  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggttt 257  Q
    || ||||||||||||   ||||||||||||  |||| ||||| ||||| ||||  |||||||  ||| ||||||  ||||||||||||  ||| ||||||    
T  25456164 tcaaaatgaaaaaccgataaccaaaccaaacaagattggtttagattgattcggttcggttttgaactgaaccagacaaggtcggatacatttccggttt 25456263  T
Q  258 ggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||| |||   |||||||| |||||| |||||  ||||||||||||    
T  25456264 ggaattttagtttcattgattttgtccgaacttcttacaccccta 25456308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 152 - 298
Target Start/End: Original strand, 34760832 - 34760979
Alignment:
Q  152 cggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggata-ttttt 250  Q
    |||||||| |||| |||||||| ||||||||||||| ||||||||||| | ||||||||  ||| |||  ||||||||||| |||| || |||| |||||    
T  34760832 cggatctcaaaatcaaaaaccaagaaccaaaccaaactagatcggtttaggttggttcggttcgattttgaaccgaaccaaacaagatcagatacttttt 34760931  T
Q  251 tcggtttggactttcgatttcattggttttgtacgaaccacttacacc 298  Q
    |||||||||| ||||| |||||| |||||||| |||||| ||||||||    
T  34760932 tcggtttggattttcggtttcatcggttttgttcgaaccgcttacacc 34760979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 25808217 - 25808368
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    ||||||||| ||||||  ||||||| ||||||| |  |||||||| || |||||| ||||||| ||||| |||||| | | ||||||| ||||  |||||    
T  25808217 tttaattttaggcatactcataagtgtgtgtgaagagggataataatattaaaatgaggagtgaggttagcatcggttcgattcatcgatttcttggatc 25808316  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttc 209  Q
    || ||||||||||||  ||| |||||||||| |||||||||| |||||||||    
T  25808317 tcaaaatgaaaaaccgagaatcaaaccaaaaaagatcggtttagattggttc 25808368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 251
Target Start/End: Complemental strand, 9505244 - 9505077
Alignment:
Q  84 tgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaac 183  Q
    ||||||||| |||||||||||| ||||||  |||||| ||||  |||||| | |||| ||||||||   |||| || |||| |||| ||  ||||| |||    
T  9505244 tgtgtgaggaaggataatattactaaaatggggagtgaggttggcatcggttcggtttatcggtttgttggatttcaaaattaaaatcctagaaccgaac 9505145  T
Q  184 caaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttttt 251  Q
    |||| || |||||||| | ||||||||  ||| |||  || |||||||| |||||| |||||||||||    
T  9505144 caaactatatcggttttggttggttcggttcgattttgaatcgaaccaaacaaggttggatatttttt 9505077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 16570794 - 16570987
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    |||||||||| |  ||| ||||| | |||||||||  |||||||| || ||||||  ||||||  |||| |||||| |  |||||||||||    |||||    
T  16570794 tttaattttgagtttaatcataaatgtgtgtgaggagggataataatactaaaatggggagtgaagttagcatcggttcagttcatcggttctttggatc 16570893  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttttt 251  Q
    || |||| ||||| |  ||||| ||||||| ||||||||||| | |||||| |  |||||||  |||| |||||| |||||| |||||||||||    
T  16570894 tcaaaattaaaaatcgagaacctaaccaaattagatcggtttaggttggtttggttcggttttgaaccaaaccaaacaaggttggatatttttt 16570987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 20860427 - 20860500
Alignment:
Q  225 cgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacacc 298  Q
    |||||||| ||||||| |||| |||||| ||||| | ||||| |||||| |||||||| |||||||||||||||    
T  20860427 cgaaccaaacaaggtcagataatttttcagtttgaattttcggtttcatcggttttgttcgaaccacttacacc 20860500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 258
Target Start/End: Complemental strand, 32322035 - 32321853
Alignment:
Q  76 cataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatg 175  Q
    ||||||| |||||||||   |||||||||| ||||||   ||||| ||||| ||| || |||||| |||||||    | ||||  |||| |||||||  |    
T  32322035 cataagtgtgtgtgaggagagataatattactaaaatggagagtgaggttagcattggtttggtttatcggttcattgaatcttaaaattaaaaaccgag 32321936  T
Q  176 aaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttg 258  Q
    |||| ||||||| |||||||||||   ||| ||||  | | ||| |||||||||||| |||||||| ||| ||||||||||||    
T  32321935 aaccgaaccaaattagatcggtttatgttgattcggtttgtttttaaaccgaaccaaacaaggtcgaatactttttcggtttg 32321853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 662 - 703
Target Start/End: Original strand, 7956934 - 7956975
Alignment:
Q  662 tccttatcaactgggtcagtttcattaacactgtaagttttg 703  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  7956934 tccttatcaactgggtcagtttcgttatcactgtaagttttg 7956975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 506
Target Start/End: Original strand, 7956644 - 7956684
Alignment:
Q  466 attattagagtagttaaatgtgaaaatatacccaattatta 506  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  7956644 attattagagtagttaaacatgaaaatatacccaattatta 7956684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 12 - 303
Target Start/End: Original strand, 16584750 - 16585051
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaa 111  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  16584750 tgagatgaagattagagaaagtgaatggattaaaaagtattttatgtttaattttgggtctaaccataagtttgtgtgaggtatgataatattagtaaaa 16584849  T
Q  112 taaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcga 211  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||     
T  16584850 taaggagtttggttatcatcagattggttcatcggtttcacggatctcgaaataaaaaaccatgaaccaaaccaaactagatcggtatcgattggttcgg 16584949  T
Q  212 atcggtttcaaaccgaaccaagcaaggtcggatatttt----------ttcggtttggactttcgatttcattggttttgtacgaaccacttacacccct 301  Q
    ||||||||||||||||||||| |||||| |||||||||          ||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  16584950 atcggtttcaaaccgaaccaaacaaggttggatattttttcgttttggttcggtttggactttcggtttcgttggttttgtccgaaccacttacacccct 16585049  T
Q  302 ac 303  Q
    ||    
T  16585050 ac 16585051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 20 - 259
Target Start/End: Original strand, 1161327 - 1161565
Alignment:
Q  20 agatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagt 119  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  1161327 agataagagaaagtgaatggattaaaaaatattttatgtttaattttgggctgaaccataagtttgtgtgaggtaggataatattagtaaaataaggagt 1161426  T
Q  120 gtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggttt 219  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| | | || |||||    
T  1161427 gtggttatcatcggattggttcatcggtttcacggatatcgaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattggcttggattggttt 1161526  T
Q  220 caaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    |||||||||||||  ||||||||||| |||||||||||||    
T  1161527 caaaccgaaccaaataaggtcggata-tttttcggtttgg 1161565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 12 - 298
Target Start/End: Complemental strand, 8084290 - 8083990
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataat---attagta 108  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| || ||||||| |||||||||||||||||||||    |||||||    
T  8084290 tgagatgaagatgagagaaagtgaatagattaaaaattattttatgtttaattttgtgcctaaccatgagtttgtgtgaggtaggataaatggattagta 8084191  T
Q  109 aaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggtt 208  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8084190 aaataaggagtgtggttatcatcggattgattcatcagtttcacggatcttgaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattggtt 8084091  T
Q  209 cgaatcggtttcaaaccgaaccaagcaaggtcggatatt-ttttcg----------gtttggactttcgatttcattggttttgtacgaaccacttacac 297  Q
    || || ||||||||||| |||||| |||||||||||||| ||||||          |||||||||||||||||| |||||| ||| ||||||||||||||    
T  8084090 cggattggtttcaaaccaaaccaaacaaggtcggatatttttttcggtttgatttagtttggactttcgatttcgttggttatgtccgaaccacttacac 8083991  T
Q  298 c 298  Q
    |    
T  8083990 c 8083990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 11620216 - 11619933
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaa 111  Q
    ||||||||||||| ||||||||||||  |||||||| ||||| |||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||    
T  11620216 tgagatgaagatgggagaaagtgaattgattaaaaagtatttcatgtttaattttgggtttaaccataagtttgtg--aggtaggataatattagtaaaa 11620119  T
Q  112 taaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcga 211  Q
    |||| ||||||  |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| |     
T  11620118 taagtagtgtgagtatcatcggattggttcatcggtttcacagatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcgattagtttgg 11620019  T
Q  212 atcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacacccctac 303  Q
    ||||||||||||| ||||||| |||| ||||||||||||| |||      ||||| |||| |||||||||| ||||||||||||||||||||    
T  11620018 atcggtttcaaactgaaccaaacaagatcggatatttttttggt------tttcggtttcgttggttttgtccgaaccacttacacccctac 11619933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 101 - 300
Target Start/End: Complemental strand, 25785962 - 25785763
Alignment:
Q  101 tattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttc 200  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  25785962 tattagtaaaataaagaatgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactatatcggtttc 25785863  T
Q  201 gattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacacccc 300  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | ||||  |||| |||||||||| |||||||||||||||||    
T  25785862 gattggttcggatcggtttcaaaccgaaccaaacaaggtcggatattttttcggtttgaaatttcagtttcgttggttttgtccgaaccacttacacccc 25785763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 59 - 300
Target Start/End: Complemental strand, 18461362 - 18461120
Alignment:
Q  59 ttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatct 158  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  18461362 ttaattttgggcttaaccataagtttgtgcgaggttggataatattaataaattaatgagtgtggttatcatcggattggttcatcggtttcacggatct 18461263  T
Q  159 cgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattt-tttcggttt 257  Q
    |||||| ||||| |||||||||||||||| || |||||||| ||||||| |  |||| ||| ||||||||| || |||||||||||||||  || |||||    
T  18461262 cgaaataaaaaatcatgaaccaaaccaaactaaatcggttttgattggtccagatcgatttgaaaccgaactaaacaaggtcggatatttggtttggttt 18461163  T
Q  258 ggactttcgatttcattggttttgtacgaaccacttacacccc 300  Q
    ||||||| | |||| ||||||||||  ||||||||||||||||    
T  18461162 ggacttttggtttcgttggttttgtttgaaccacttacacccc 18461120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 22 - 259
Target Start/End: Original strand, 42009880 - 42010102
Alignment:
Q  22 atgagagaaagtgaatgaattaaaaaa-tattttatgtt-----taattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataag 115  Q
    |||||||||| |||||| || |||||| |||||||||||     ||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  42009880 atgagagaaaatgaatggataaaaaaagtattttatgttgactttaattttaggcctaaccataagtttgtgtgaggtaggatactattagtaatataag 42009979  T
Q  116 gagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcg 215  Q
    ||||||||||||||||||                     ||||| ||||||||||||||||  ||||| ||| |||||||||||| ||||||| | ||||    
T  42009980 gagtgtggttatcatcgg---------------------atctcaaaatgaaaaaccatgagtcaaactaaactagatcggtttcaattggtttggatcg 42010058  T
Q  216 gtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  42010059 gtttcaaaccgaaccaaacaatgtcggatattttttcggtttgg 42010102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 58 - 251
Target Start/End: Complemental strand, 11911839 - 11911646
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    |||||||||| || ||| ||||||| || |||| |  ||||||||||| | ||||  |||||| | |||  ||||| ||||||||||||||   |||||     
T  11911839 tttaattttgagcttaatcataagtgtgcgtgatgagggataatattactcaaatggggagtgagtttagtatcggtttggttcatcggttcatcggatt 11911740  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttttt 251  Q
    || |||| |||||||| |||| ||| |||| ||||||||||| | ||||||||  |||||||  ||||||||||| |||||||||||| |||||    
T  11911739 tcaaaattaaaaaccaagaactaaatcaaactagatcggtttaggttggttcggttcggttttgaaccgaaccaaacaaggtcggatacttttt 11911646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 25787365 - 25787286
Alignment:
Q  30 aagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaa 109  Q
    ||||| ||| |||||||| ||||| |||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  25787365 aagtgcatggattaaaaattatttaatgtttaattttgggtctaacaataagtttgtgtgaggtaggataatattagtaa 25787286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 34148499 - 34148541
Alignment:
Q  428 atatattattagagtagttaaacatgaaaatatacccaattat 470  Q
    ||||||| | |||||||||||||||||||||||||||||||||    
T  34148499 atatattttcagagtagttaaacatgaaaatatacccaattat 34148541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 32678554 - 32678602
Alignment:
Q  250 ttcggtttggactttcgatttcattggttttgtacgaaccacttacacc 298  Q
    ||||||||| | |||||||||||| |||||||| |||||||||||||||    
T  32678554 ttcggtttgaattttcgatttcatcggttttgttcgaaccacttacacc 32678602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 302
Target Start/End: Complemental strand, 4919566 - 4919491
Alignment:
Q  227 aaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||||| |||||||| ||||  ||||||||||| ||||||| |||| | |||||||| |  ||||||||||||||||    
T  4919566 aaccaggcaaggtcagataccttttcggtttgaactttcggtttcgtcggttttgtccctaccacttacaccccta 4919491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 33857634 - 33857601
Alignment:
Q  269 ttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||||||||| |||||||||||||||||||    
T  33857634 ttcattggttttgtccgaaccacttacaccccta 33857601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 302
Target Start/End: Original strand, 33923289 - 33923322
Alignment:
Q  269 ttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||||||||| |||||||||||||||||||    
T  33923289 ttcattggttttgtccgaaccacttacaccccta 33923322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 8e-97; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 12 - 259
Target Start/End: Complemental strand, 31111713 - 31111466
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaa 111  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  31111713 tgagatgaagatgagagaaagtgaatgaattaaaaagtattttatatttaattttgcgcctaaccataattttgtgtgaggtaggataatattagtaaaa 31111614  T
Q  112 taaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcga 211  Q
    |||| ||||||||||||| | |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||      
T  31111613 taagaagtgtggttatcaccagattggtttatcggtttcaaggatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcaattggttcag 31111514  T
Q  212 atcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    ||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  31111513 atcagtttcaaaccgaaccaaacaaggtcggatattttttcggtttgg 31111466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 13852163 - 13852453
Alignment:
Q  20 agatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagt 119  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  13852163 agatgagagaaagtgaatggattaaaaaatattttatgtttaattttggtcataaccttaagtttgtgtgaggtaagataatattaataaaataaggagt 13852262  T
Q  120 gtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggttt 219  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||| | ||||||||    
T  13852263 gtggttatcaacagattggttcatcggtttcacggatctcaaaatgaaaaactatgaaccaaaccaaactagatcggttttgattggtttggatcggttt 13852362  T
Q  220 caaaccgaaccaagcaaggtcggatatttt----------ttcggtttggactttcgatttcattggttttgtacgaaccacttacacccc 300  Q
    ||||||||| ||| ||| ||| ||||||||          |||  ||||||||||||||||| |||||||||| ||||| |||||||||||    
T  13852363 caaaccgaatcaaacaaagtcagatatttttttgatttgattcaatttggactttcgatttcgttggttttgtccgaactacttacacccc 13852453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 58 - 298
Target Start/End: Complemental strand, 4638417 - 4638168
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgag-----gtaggataatattagtaaaa----taaggagtgtggttatcatcggattggttcatcggtt 148  Q
    ||||||||||||  ||||||||| ||||||||||     | ||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  4638417 tttaattttgggtctaaccataattttgtgtgagtgtgaggaggataatattagtaaaagaattaaggagtgtggttatcatcggattggttcatcggtt 4638318  T
Q  149 tcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattt 248  Q
    ||||||||||| ||||||||||||||||||||||||||| || ||| || | |||||||||| |||| |||||||||||||| | |||||||||||||||    
T  4638317 tcacggatctcaaaatgaaaaaccatgaaccaaaccaaactaaatcagtattgattggttcggatcgatttcaaaccgaaccgaacaaggtcggatattt 4638218  T
Q  249 tttcggtttggactttcgatttcattggttttgtacgaaccacttacacc 298  Q
    |||||||||||||||||| |||| ||||||| ||  ||||| ||||||||    
T  4638217 tttcggtttggactttcggtttcgttggtttagtctgaaccgcttacacc 4638168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 36009462 - 36009179
Alignment:
Q  17 tgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtag--------gataatattagta 108  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||||| | ||||||| ||||||        |||||||||||||    
T  36009462 tgaagatgagagaaagtgaatggattaaaaattattttatgtttaattttggacctaaccatgaatttgtgtaaggtagaaatgtaggataatattagta 36009363  T
Q  109 aaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggtt 208  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||          ||||| ||    
T  36009362 aaataaggagtgtggttatcatcggattgattcatcggtttcatggatctcgaaatgaaaaaccatgaaccaaaccaaacta----------gattgatt 36009273  T
Q  209 cgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |  |||||||||||||||||| || |||| ||||||||||||||  |||||||||| |||||| || ||||||| ||||| ||||  |||||||    
T  36009272 cagatcggtttcaaaccgaactaaacaagatcggatattttttcaatttggacttttgatttcgttagttttgtccgaactacttgaaccccta 36009179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 38607275 - 38606980
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt-----taattttgggcataaccataagttt----gtgtgaggtaggataata 102  Q
    |||||||| ||||||| ||| |||||| |||||| | |||||||||||     ||||||||||| ||| ||||||| |    ||||||||  |||||| |    
T  38607275 tgagatgatgatgagataaaatgaatggattaaatagtattttatgttggacttaattttgggcctaatcataagtgtttgcgtgtgaggagggataaca 38607176  T
Q  103 ttagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcga 202  Q
    ||||||||||   ||||||||||| ||||  || ||||||||||||| | ||||||| ||||||||||||| ||||| |||||||  || || |||| ||    
T  38607175 ttagtaaaatggcgagtgtggttagcatcaaatcggttcatcggttttatggatctcaaaatgaaaaaccaagaaccgaaccaaacaaggtcagtttaga 38607076  T
Q  203 ttggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccc 299  Q
    ||||||||  |||||||  || |||| ||| ||||||||||||| |||||||||||||||| |  |||| ||| ||||||  ||||| |||||||||    
T  38607075 ttggttcggttcggttttgaatcgaa-caaacaaggtcggatatattttcggtttggacttacagtttcgttgattttgtctgaaccgcttacaccc 38606980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 37630634 - 37630343
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    ||||| || |||||||||||||||||||||||| || ||||| |||||      |||||||| || ||| |||||||  ||||||||  |||||||||||    
T  37630634 tgagacgatgatgagagaaagtgaatgaattaagaagtatttgatgttggactttaattttgagcttaatcataagt--gtgtgaggagggataatatta 37630537  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
     |||| |  ||||||  |||| ||||   | |||||| |||||    ||||||| |||| |||||||  ||||  ||||||| |||||| |||| | |||    
T  37630536 ctaaagtggggagtgatgttagcatccattcggttcaccggttcattggatctcaaaattaaaaaccgagaactgaaccaaactagatcagtttaggttg 37630437  T
Q  206 gttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||| | |||| |||  |||| |||||||||||||  |||| |||||||||||||   |||| |||||| |||||||| |||| ||||||||||||||    
T  37630436 gtttggatcgattttgaaccaaaccaagcaaggttcgatactttttcggtttgg---ttcggtttcatcggttttgtccgaatcacttacaccccta 37630343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 259
Target Start/End: Original strand, 29109042 - 29109295
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    |||||||| |||  |||||||||||||||||||  | |||||||||||      |||||||| || |||  |||| | |||||||||  |||||||||||    
T  29109042 tgagatgatgataggagaaagtgaatgaattaaggagtattttatgttggactttaattttgagcttaattataattgtgtgtgaggggggataatatta 29109141  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
     ||||||  | ||   ||||| |||||  ||||||||||||||    ||||||| |||| |||||||  ||||||||||||| ||||| ||||| | |||    
T  29109142 ctaaaatgggaaggaaggttagcatcgatttggttcatcggttctttggatctcaaaattaaaaaccgagaaccaaaccaaactagattggtttaggttg 29109241  T
Q  206 gttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
     ||||  |||||||  ||| ||||||| |||||||||||| |||||| ||||||    
T  29109242 cttcggttcggttttgaactgaaccaaacaaggtcggataatttttcagtttgg 29109295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 27866710 - 27866622
Alignment:
Q  213 tcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||  |||||||||||||||||||||||| |||| ||||||||| ||||| ||| || | |||||| |||||||||||||||||||    
T  27866710 tcggttttgaaccgaaccaagcaaggtcggatactttt-cggtttggattttcggttttatcgattttgtccgaaccacttacaccccta 27866622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 5526519 - 5526270
Alignment:
Q  15 gatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagta 108  Q
    ||||| ||||| ||||||||||||||||||  | |||||||||||      |||||||| |  ||| ||||||| ||||| |||  |||||||| || ||    
T  5526519 gatgatgatgacagaaagtgaatgaattaaggagtattttatgttggactttaattttgagtttaatcataagtgtgtgtaaggagggataataatacta 5526420  T
Q  109 aaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggtt 208  Q
    ||||  |||||| | ||| |||||| | |||||||| |||    ||||||| |||| ||||||   ||||| ||||||| ||||||||||| | ||||||    
T  5526419 aaatggggagtgagattagcatcggttcggttcatctgttctttggatctcaaaattaaaaactgagaaccgaaccaaactagatcggtttaggttggtt 5526320  T
Q  209 cgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    ||  || ||||  |||||||| || ||||||||||||  ||||||||||||    
T  5526319 cgt-tcagttttgaaccgaacaaaacaaggtcggatacgttttcggtttgg 5526270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 258
Target Start/End: Original strand, 3919883 - 3919987
Alignment:
Q  154 gatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcg 253  Q
    |||||| |||| |||||  | ||||||||||||| ||||||||||| | ||||||||  |||||||  |||| |||||| ||| |||| ||  |||||||    
T  3919883 gatctcaaaattaaaaattaagaaccaaaccaaactagatcggtttagtttggttcggttcggttttgaaccaaaccaaacaaagtcgaatgctttttcg 3919982  T
Q  254 gtttg 258  Q
    |||||    
T  3919983 gtttg 3919987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 273
Target Start/End: Complemental strand, 10721977 - 10721926
Alignment:
Q  222 aaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcat 273  Q
    ||||||||||| ||||||| |||| |||||||||||||| ||||| ||||||    
T  10721977 aaccgaaccaaacaaggtcagatactttttcggtttggattttcggtttcat 10721926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 12894051 - 12894100
Alignment:
Q  254 gtttggactttcgatttcattggttttgtacgaaccacttacacccctac 303  Q
    ||||||||||| |||||| ||||||||||  |||||||| ||||||||||    
T  12894051 gtttggacttttgatttcgttggttttgtctgaaccactcacacccctac 12894100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 2e-94; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 7352258 - 7352555
Alignment:
Q  14 agatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaata 113  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||    
T  7352258 agatgaagatgagagaaagtgaatggattaaaacgtattttatgtttaattttgggtctaactataagtttgtgtgacgtaggataatattagtaaaata 7352357  T
Q  114 aggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaat 213  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||    
T  7352358 aggagtgtggttatcatcggattgatt-atcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactagaccggtttcgattggttcggat 7352456  T
Q  214 cggtttcaaaccgaaccaagcaaggtcggatattttttcgg----------tttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||||||| ||||||  || |||||||||||||||||          |||||||||||| |||| ||||||||||  |||||| |||||||||||    
T  7352457 cggtttcaaaccaaaccaaataaagtcggatattttttcggttcggtttgatttggactttcggtttcgttggttttgtctgaaccaattacaccccta 7352555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 46993552 - 46993258
Alignment:
Q  14 agatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagt 107  Q
    |||||||||||||||||| |||||| |||||||| |||||||||||      ||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  46993552 agatgaagatgagagaaattgaatggattaaaaagtattttatgttggactttaattttgggcttaaccttaagtttgtgtgaggtacgataatattagt 46993453  T
Q  108 aaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggt 207  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |    
T  46993452 aaaataaggagtgtggttatcatcggattggttaatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaactagatcagtttcgattgat 46993353  T
Q  208 tcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||| |||  ||||||||||| |||| |||||||| ||||||||| | |||| |||||| ||||||| | |||||| |||||||||| ||||||||    
T  46993352 tcggatcaatttcaaaccgacccaaacaaggtcgaatattttttagatttgaactttcaatttcatcgattttgtccgaaccacttccaccccta 46993258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 39695370 - 39695087
Alignment:
Q  20 agatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagt 119  Q
    |||||||||||| |||||| || ||||| |||||||||||||||||||||  ||||||||||||||||||||||| ||||||    ||||||||||||||    
T  39695370 agatgagagaaaatgaatggatgaaaaattattttatgtttaattttgggtctaaccataagtttgtgtgaggtaagataat----gtaaaataaggagt 39695275  T
Q  120 gtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggttt 219  Q
    | |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||  ||||||||    
T  39695274 gaggttatcatcagattggttcatcggtttcacggacctcgaaatgaaaaaccatgaaccaaaccaaactatatcagtttcgattggttcagatcggttt 39695175  T
Q  220 caaaccgaaccaagcaaggtcggatattttttcggt-----ttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||||||||||||| ||||||||||||| | ||||||     ||||||||||| |||| |||||||||  |||||||||||||||||||    
T  39695174 caaaccgaaccaaacaaggtcggatatctcttcggtttgggttggactttcggtttcgttggttttgcccgaaccacttacaccccta 39695087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 25 - 302
Target Start/End: Complemental strand, 7995234 - 7994955
Alignment:
Q  25 agagaaagtgaatgaattaaaaaatattttatgtt-----taattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagt 119  Q
    ||||||| |||||| |||||||| |||| ||||||     ||||||||| | ||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  7995234 agagaaaatgaatggattaaaaagtattctatgttgactttaattttggcc-taaccataagtttgtg--aggtaagataatattagtaaaataaggagt 7995138  T
Q  120 gtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggttt 219  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| |||    
T  7995137 gtggttattatcggattggttcatcggtttcacgaatctcaaaatgaaaaaccatgaaccaaaccaaactagatcggtttcaattggttcggatcgattt 7995038  T
Q  220 caaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
      ||||||||||| |||||||  |||||||||| ||||||||| ||  |||| |||||||  ||||||||  |||||||||||    
T  7995037 tcaaccgaaccaaacaaggtcaaatattttttcagtttggactatcagtttcgttggtttaatacgaaccgtttacaccccta 7994955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 11727326 - 11727449
Alignment:
Q  124 ttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaa 223  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||          |||||||||    
T  11727326 ttatcatcggattggtttatcggttttacggatctcgaaatgaaaaaccacgaaccaaaccaaactagatcggttttgatt----------ggtttcaaa 11727415  T
Q  224 ccgaaccaagcaaggtcggatattttttcggttt 257  Q
    ||||||||| |||||||  |||||||||||||||    
T  11727416 ccgaaccaaacaaggtcatatattttttcggttt 11727449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 59 - 259
Target Start/End: Original strand, 46265238 - 46265436
Alignment:
Q  59 ttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatct 158  Q
    |||||||||||||||| |||||||  |||||||| |||| |||| ||||||||| |||||||  |||| ||| |  ||||||||||||||||  ||||||    
T  46265238 ttaattttgggcataatcataagt--gtgtgaggaaggacaataatagtaaaatgaggagtggagttaacattgatttggttcatcggtttcttggatct 46265335  T
Q  159 cgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttg 258  Q
    | |||||| ||||    ||||||||||||  |||||||||| ||||| ||||  |||||||  |||||||||   ||||||||||||  |||| ||||||    
T  46265336 caaaatgacaaactgaaaaccaaaccaaacaagatcggtttagattgattcggttcggttttgaaccgaacccgacaaggtcggatacatttttggtttg 46265435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 302
Target Start/End: Original strand, 3996825 - 3997128
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatg------tttaattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    |||||||| || |||||||||||||||| |||| || |||||||||      ||||||||||||||||| |||||||  ||||||||   | || |||||    
T  3996825 tgagatgatgacgagagaaagtgaatgacttaagaagtattttatgcttgactttaattttgggcataatcataagt--gtgtgaggagagttattatta 3996922  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
    |||||||  ||||||  |||| || ||| | ||||||| |||| |  ||||||| ||||||||| | | ||||| |||||||  || | ||||| |||||    
T  3996923 gtaaaattgggagtggagttaccaacggttcggttcataggttccttggatctcaaaatgaaaaccga-gaaccgaaccaaacaaggttggtttagattg 3997021  T
Q  206 gttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggt----------ttggactttcgatttcattggttttgtacgaaccacttac 295  Q
    ||| |  |||||||  |||| |||||| ||| |||||||  || ||||||          ||||||||||| ||||||||||||||| ||||||||||||    
T  3997022 gttaggttcggttttgaaccaaaccaaacaaagtcggattcttcttcggtttggtacggtttggactttcggtttcattggttttgtccgaaccacttac 3997121  T
Q  296 accccta 302  Q
    |||||||    
T  3997122 accccta 3997128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 79 - 231
Target Start/End: Original strand, 2197623 - 2197775
Alignment:
Q  79 aagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaac 178  Q
    |||| |||| |||| |||||||||||||||||||  ||||||  |||| |||||| |||||| |||||||||  ||||||| ||||||||||||  ||||    
T  2197623 aagtgtgtgcgaggaaggataatattagtaaaatggggagtgaagttagcatcggtttggttgatcggtttcttggatctcaaaatgaaaaaccgagaac 2197722  T
Q  179 caaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaacca 231  Q
    | || ||||  || ||| ||| |||||||||  ||||||||  ||||||||||    
T  2197723 ccaatcaaacaaggtcgatttagattggttcagatcggtttagaaccgaacca 2197775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 14 - 257
Target Start/End: Complemental strand, 48070918 - 48070669
Alignment:
Q  14 agatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagt 107  Q
    |||||| ||||| |||||||||||||||||| || |||||||||||      |||||||| |  ||| ||||||| ||||||| |  ||||| ||||| |    
T  48070918 agatgaggatgaaagaaagtgaatgaattaagaagtattttatgttggactttaattttgagattaatcataagtgtgtgtgaagagggatattattact 48070819  T
Q  108 aaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggt 207  Q
     ||||   ||||| ||||| |||||| |  ||| |||||||    ||||||| |||| |||||||  ||||| || |||| ||||||||||| | || ||    
T  48070818 gaaatggtgagtgaggttaacatcggttcagtttatcggttctttggatctcaaaattaaaaaccgagaaccgaatcaaactagatcggtttaggttagt 48070719  T
Q  208 tcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggttt 257  Q
    |||  |||||||  |||| || ||| |||||||||||||||||| |||||    
T  48070718 tcggttcggttttgaaccaaatcaaacaaggtcggatatttttttggttt 48070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 27227036 - 27227089
Alignment:
Q  249 tttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||||||||||| |||||||| |||||||| ||||| |||||||||||||    
T  27227036 tttcggtttggacttttgatttcatcggttttgtccgaacaacttacaccccta 27227089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 95 - 302
Target Start/End: Complemental strand, 31136357 - 31136158
Alignment:
Q  95 ggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatc 194  Q
    ||||||||||| || ||| | ||||| | ||| |||||| | ||||||||||||    ||||||||||||   |||||| ||||||||||||| || ||     
T  31136357 ggataatattactataatgatgagtgagtttagcatcggttcggttcatcggttctttggatctcgaaatttgaaaccaagaaccaaaccaaattatatt 31136258  T
Q  195 ggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccactta 294  Q
    ||||| | ||||||||     ||||  ||||||| ||| |||||||||||| |||||||||||||   || | | |||| ||||| || ||||||| |||    
T  31136257 ggtttaggttggttcg-----gttttgaaccgaatcaaacaaggtcggatactttttcggtttgg---tttggtgtcatcggtttcgtccgaaccattta 31136166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 35738067 - 35738178
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    ||||||||||||| ||| |||||||  |||||| |  ||||||||||||||||||  |||||| |||||  ||| | |||||| ||||||| |  |||||    
T  35738067 tttaattttgggcctaatcataagt--gtgtgatgagggataatattagtaaaatggggagtggggttacaatcagtttggttgatcggttccttggatc 35738164  T
Q  158 tcgaaatgaaaaac 171  Q
    || |||||||||||    
T  35738165 tcaaaatgaaaaac 35738178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 2e-94; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 12 - 259
Target Start/End: Original strand, 28319176 - 28319423
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaa 111  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  28319176 tgagatgaaaatgagagaaagtgaattgattaaaaaatattttatgtttaattttgggcctaaccataagtttgtgtgaggtaggataatattagtaaaa 28319275  T
Q  112 taaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcga 211  Q
    |||||||||||||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||     
T  28319276 taaggagtgtggttatcatcagattgattcatcaggttcacgaatctcgaaatgaaaaaccatgaaccaaaccaaattaaatcgattttgattggttcgg 28319375  T
Q  212 atcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    | ||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  28319376 aacggtttcaaaccgaaccaaacaatgtcagatattttttcggtttgg 28319423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 14 - 303
Target Start/End: Original strand, 23107789 - 23108098
Alignment:
Q  14 agatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagt 107  Q
    |||||| ||| |||||||||||||| |||||||| |||||||||||      |||||||| || ||||||||||||||||||||||||||||||||||||    
T  23107789 agatgatgattagagaaagtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggataatattagt 23107888  T
Q  108 aaaataaggagtgtggttatcatcggatt----ggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgat 203  Q
    |||||||||||| ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  23107889 aaaataaggagtatggttatcatcggattgattggttcatcggtttcacggatctcgaaatgaaaaaccatgaatcaaaccaaactagatcggtttcgat 23107988  T
Q  204 tggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttt----------ttcggtttggactttcgatttcattggttttgtacgaaccactt 293  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||          ||||||||||||||||| |||| |||||||||| ||||||||||    
T  23107989 tggttcggatcggtttcaaaccaaaccaaacaaggtcggatatttttcctgtttggttcggtttggactttcggtttcgttggttttgtccgaaccactt 23108088  T
Q  294 acacccctac 303  Q
    ||||||||||    
T  23108089 acacccctac 23108098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 24466202 - 24466448
Alignment:
Q  19 aagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaat 112  Q
    |||||||||||||||||||| |||||||| |||||||||||      |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  24466202 aagatgagagaaagtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggataatattagtaaaat 24466301  T
Q  113 aaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||||| |    
T  24466302 aaggagtgtggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaatcaaactagatcggtttcaattggttcgga 24466401  T
Q  213 tcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    |||||||||||||||||||| |||| || ||||||||||| ||||||    
T  24466402 tcggtttcaaaccgaaccaaacaagatcagatattttttcagtttgg 24466448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 85 - 251
Target Start/End: Complemental strand, 4413681 - 4413515
Alignment:
Q  85 gtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaacc 184  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  4413681 gtgtgaggtaggataatactagtaaaataaggagtgtgattatcatcggattggtttatcggtttcacggatctcgaaatgaaaaaccatgaaccaaagc 4413582  T
Q  185 aaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttttt 251  Q
    ||| |||||||||||||||||||||| |||||||| |||||||||||| |||| |||||||||||||    
T  4413581 aaactagatcggtttcgattggttcggatcggttttaaaccgaaccaaacaagatcggatatttttt 4413515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 42141545 - 42141257
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    |||||||| ||||||||||||||||| | ||||  | |||||||||||      |||||||| |  ||| ||||||| |||||||||  | |||||||||    
T  42141545 tgagatgatgatgagagaaagtgaatca-ttaaggagtattttatgttggactttaattttgagattaatcataagtgtgtgtgaggaggtataatatta 42141447  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
     |||||| ||||||| | ||| |||||| | |||||     |||   ||||||| |||| |||||||| ||||| ||||||| ||||||| ||| | ||     
T  42141446 ctaaaatgaggagtgagtttagcatcggttcggttc-----ttt---ggatctcaaaattaaaaaccaagaaccgaaccaaagtagatcgatttaggttt 42141355  T
Q  206 gttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttttt-cggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||||   |||||||  |||||||||||  ||||||| ||||||||| ||||||||| ||||| |||||| |||||||| | |||||||||| ||||||    
T  42141354 gttcagttcggttttgaaccgaaccaaagaaggtcgaatatttttttcggtttggattttcggtttcatcggttttgtcctaaccacttacgccccta 42141257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 100 - 259
Target Start/End: Original strand, 8606106 - 8606265
Alignment:
Q  100 atattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggttt 199  Q
    |||||||||||||  |||||||||||| |||||| | | ||||| |||| |  ||||||| |||||||||||   ||||| ||||||   ||||||||||    
T  8606106 atattagtaaaatggggagtgtggttaccatcggttcgattcattggttccttggatctcaaaatgaaaaactgagaaccgaaccaaccaagatcggttt 8606205  T
Q  200 cgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
     ||||||||||| | |||||  |||||| |||| ||| || ||||| |||||||||||||    
T  8606206 agattggttcgatttggttttgaaccgagccaaacaaagttggatactttttcggtttgg 8606265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 58 - 298
Target Start/End: Original strand, 53393087 - 53393337
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    |||||||||| || ||| || |||| ||||||| |  ||||||||||| ||||||    |||| ||||| |||||| | ||||||||||||    ||||     
T  53393087 tttaattttgagcttaatcagaagtgtgtgtgaagagggataatattactaaaatggaaagtgaggttagcatcggttcggttcatcggttcattggatt 53393186  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttt-------- 249  Q
    || || | | |||||  ||||| ||||||| ||||||||||| | ||||||||  || |||| |||||||||||| |||||||||||| |||            
T  53393187 tcaaagttataaaccgagaaccgaaccaaactagatcggtttaggttggttcggttcagttttaaaccgaaccaaacaaggtcggatacttttttggttt 53393286  T
Q  250 --ttcggtttggactttcgatttcattggttttgtacgaaccacttacacc 298  Q
      ||||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  53393287 ggttcggtttggattttcggtttcatcggttttgtccgaaccacttacacc 53393337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 13207472 - 13207547
Alignment:
Q  222 aaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacac 297  Q
    ||||||||||| |||| || |||| |||||||||||||| |||||||||||| |||||||| |||||| |||||||    
T  13207472 aaccgaaccaaacaagatcagatactttttcggtttggattttcgatttcatcggttttgtccgaaccgcttacac 13207547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 8056939 - 8056816
Alignment:
Q  84 tgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaac 183  Q
    ||||||||| |||||||||||||||||||  |||||| |||||  ||||| |  |||||||||||||  ||||||| ||||||||| | | ||||| |||    
T  8056939 tgtgtgaggaaggataatattagtaaaatggggagtggggttaggatcggttcagttcatcggtttcttggatctcaaaatgaaaatcga-gaaccgaac 8056841  T
Q  184 caaaatagatcggtttcgattggtt 208  Q
    ||||  || ||||||| ||||||||    
T  8056840 caaacaagttcggtttagattggtt 8056816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 19682001 - 19682091
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtt 148  Q
    |||||||||| || ||| | ||||| | ||||||   ||||||||||| |||||| || |||| ||||| |||||| ||||||||||||||    
T  19682001 tttaattttgagcttaatcgtaagtgtatgtgagaagggataatattactaaaatgagaagtgaggttagcatcggtttggttcatcggtt 19682091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 39839104 - 39839153
Alignment:
Q  253 ggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||| ||||| |||||| ||||| || |||||||||||||||||||    
T  39839104 ggtttggattttcggtttcatcggtttcgtccgaaccacttacaccccta 39839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879 (Bit Score: 172; Significance: 5e-92; HSPs: 1)
Name: scaffold0879
Description:

Target: scaffold0879; HSP #1
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 467 - 713
Alignment:
Q  19 aagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaat 112  Q
    |||||||||||||||||||| |||||||| |||||||||||      |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  467 aagatgagagaaagtgaatggattaaaaagtattttatgttggactttaattttgagcctaaccataagtttgtgtgaggtaggataatattagtaaaat 566  T
Q  113 aaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||||| |    
T  567 aaggagtgtggttatcatcggattggttcatcggtttcacggatctcaaaatgaaaaaccatgaaccaaatcaaactagatcggtttcaattggttcgga 666  T
Q  213 tcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    |||||||||||||||||||| |||| || ||||||||||| ||||||    
T  667 tcggtttcaaaccgaaccaaacaagatcagatattttttcagtttgg 713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 168; Significance: 1e-89; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 40 - 259
Target Start/End: Complemental strand, 19947980 - 19947761
Alignment:
Q  40 attaaaaaatattttatgtttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggt 139  Q
    |||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19947980 attaaaaagtatcttatgtttaattttgggcctaaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggt 19947881  T
Q  140 tcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggt 239  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| | ||||||||||| | ||||||||||||| ||||||| ||| ||    
T  19947880 tcatcggtttcacggatcttgaaatgaaaaaccatgaaccaaatcaaagtagatcagattcgattggtttggatcggtttcaaactgaaccaaacaatgt 19947781  T
Q  240 cggatattttttcggtttgg 259  Q
    ||||||||||||||||||||    
T  19947780 cggatattttttcggtttgg 19947761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 16746357 - 16746548
Alignment:
Q  62 attttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcga 161  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  16746357 attttgggcctaaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgaggttatcatcggattggttcatcgatttcacggatctcga 16746456  T
Q  162 aatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcg 253  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||    
T  16746457 aatgaaaaaccatgaatcaaaccaaactagatcggtttcgattggtttggatcggtttcaaaccgaaccaaacaaggttggatattttttcg 16746548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 20 - 302
Target Start/End: Complemental strand, 31896181 - 31895896
Alignment:
Q  20 agatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaata 113  Q
    ||||||||||||||||||| |||| |||||||||||||||      ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31896181 agatgagagaaagtgaatggattataaaatattttatgttggactttaattttgggcctaaccataagtttgtgtgaggtaggataatattagtaaaata 31896082  T
Q  114 aggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaat 213  Q
    ||||||||||||||||||||             ||||||||||| |||||| ||||| |||||||||||||||| ||||||||||| |||||||||  ||    
T  31896081 aggagtgtggttatcatcgg-------------tttcacggatcacgaaataaaaaatcatgaaccaaaccaaactagatcggtttggattggttcagat 31895995  T
Q  214 cggtttcaaaccgaaccaagcaaggtcggatattttttcggt----------ttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||          |||||||||||||||  |||||||||| |||||||||||||||||||    
T  31895994 cggtttcaaaccgaaccaaacaaggtcggatattttttcggtttggttcagtttggactttcgattttgttggttttgtccgaaccacttacaccccta 31895896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 136 - 302
Target Start/End: Original strand, 16746550 - 16746726
Alignment:
Q  136 tggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagca 235  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||||||||||| ||    
T  16746550 tggttcatcgatttcacggatctcgaaatgaaaaaccatgaatcaaaccaaactagatcggtttcgattggtttggatcggtttcaaaccgaaccaaaca 16746649  T
Q  236 aggtcggatatttt----------ttcggtttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||| |||||||||          |||||||| |||||||| |||| |||||||||| ||||||||||||| |||||    
T  16746650 aggttggatattttttcgatttggttcggtttagactttcggtttcgttggttttgtccgaaccacttacatcccta 16746726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 1498129 - 1498326
Alignment:
Q  61 aattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcg 160  Q
    ||||||| || ||| ||||||| |||| |||   ||||||||||| ||||||  |||||   |||| |||||| | |||||||||||||   |||||||     
T  1498129 aattttgagcttaatcataagtgtgtgcgagaagggataatattactaaaatggggagtcatgttagcatcggttcggttcatcggtttattggatctca 1498228  T
Q  161 aaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttg 258  Q
    |||| ||| ||   |||||||||  || || |||||||| | |||||||   |||||||  ||||||||||| |||||||||||||||| || |||||    
T  1498229 aaataaaatactgagaaccaaacttaactacatcggtttaggttggttcagttcggttttgaaccgaaccaaacaaggtcggatattttctcagtttg 1498326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 41092105 - 41092163
Alignment:
Q  234 caaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccact 292  Q
    ||||||| ||||  ||||| |||| |||||||| ||||||||||||||| |||||||||    
T  41092105 caaggtcagataccttttcagttttgactttcggtttcattggttttgttcgaaccact 41092163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 1e-80; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 59 - 251
Target Start/End: Complemental strand, 46655768 - 46655576
Alignment:
Q  59 ttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatct 158  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  46655768 ttaattttgggcctaaccataaatttgtgtgaggtaggataatattagtaaaataagaagtgtggttatcattggattggttcatcggtttcacggatct 46655669  T
Q  159 cgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatatttttt 251  Q
    |||||||||||| |||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  46655668 cgaaatgaaaaagcatgaaccaaaccaaactagattggttttgattggttcggatcggtttcaaaccgaaccaagtaaggtcggatatttttt 46655576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 12 - 299
Target Start/End: Complemental strand, 44471323 - 44471020
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    ||||||||  ||| ||||||||||||||||||   | |||||||||||      |||||||| || ||| ||||||| ||| |||||  |||||||||||    
T  44471323 tgagatgataatgggagaaagtgaatgaattatggagtattttatgttagcctttaattttgagcttaatcataagtgtgtttgaggagggataatatta 44471224  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
     |||| |  |||||   |||| |||||| | ||||||||||||    |||| || |||| |||||||| ||||| ||||||| ||||||||||| |||||    
T  44471223 ctaaactggggagttatgttagcatcggttcggttcatcggttctttggatttcaaaattaaaaaccaagaaccgaaccaaactagatcggtttagattg 44471124  T
Q  206 gttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggt----------ttggactttcgatttcattggttttgtacgaaccacttac 295  Q
    ||| |  |||||||  |||||||| || ||||||||||||  ||||||||          ||||| |||||||||||| |||||||| ||||||||||||    
T  44471123 gtttggttcggttttgaaccgaactaaacaaggtcggatacattttcggtttggttcggtttggattttcgatttcatcggttttgtccgaaccacttac 44471024  T
Q  296 accc 299  Q
    ||||    
T  44471023 accc 44471020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 84 - 259
Target Start/End: Original strand, 11503284 - 11503459
Alignment:
Q  84 tgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaac 183  Q
    |||||||||  |||||||| |||||||||  |||||| ||||| ||| || | |||| |||||||||  ||||||| |||||||||| |  |||||||||    
T  11503284 tgtgtgaggagggataataatagtaaaatggggagtgaggttagcatgggttcggtttatcggtttcttggatctcaaaatgaaaaatcgagaaccaaac 11503383  T
Q  184 caaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    ||||  |||||||||||||||||||||  |||||||  ||||  ||||  ||||||||||||  |||| |||||||    
T  11503384 caaataagatcggtttcgattggttcggttcggttttgaaccttaccagacaaggtcggatacatttttggtttgg 11503459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 30554588 - 30554670
Alignment:
Q  175 gaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggttt 257  Q
    ||||| ||||||| ||||||||||| ||||||||||  ||| |||  |||||||| || |||||||||||| |||||||||||    
T  30554588 gaaccgaaccaaactagatcggtttagattggttcggttcgattttgaaccgaactaaacaaggtcggatactttttcggttt 30554670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 257
Target Start/End: Original strand, 44681881 - 44682129
Alignment:
Q  15 gatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagta 108  Q
    ||||| |||| |||||||| ||||||||||  | |||||||||||      |||||||| || ||| ||||||| ||||||||   ||||||||||| |     
T  44681881 gatgatgatgggagaaagtaaatgaattaaggagtattttatgttggactttaattttgagcttaatcataagtgtgtgtgagaacggataatattactc 44681980  T
Q  109 aaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggttt-cgattggt 207  Q
    || |  | |||| ||||| |||||| | ||||  ||||||   ||||| || |||| |||||||| ||||||||||||| |||||||||||  | |||||    
T  44681981 aa-tgggaagtgaggttagcatcggttcggtttgtcggttcatcggatttcaaaattaaaaaccaagaaccaaaccaaactagatcggtttaggtttggt 44682079  T
Q  208 tcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggttt 257  Q
    ||   |||||||  | ||||||||| |||||||| ||| |||||||||||    
T  44682080 tcagttcggttttgatccgaaccaaacaaggtcgtatactttttcggttt 44682129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 46892703 - 46892657
Alignment:
Q  213 tcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttgg 259  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||    
T  46892703 tcggttttaaaccgaaccaaacaaggtcggatattttttcggtttgg 46892657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 257
Target Start/End: Original strand, 779533 - 779629
Alignment:
Q  161 aaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggttt 257  Q
    |||| |||||||| ||||| ||||||| ||||| ||||| | ||||||||| || ||||  |||||||| || |||||| ||||| |||||||||||    
T  779533 aaattaaaaaccaagaaccgaaccaaactagattggtttaggttggttcgattctgttttgaaccgaactaaacaaggttggatactttttcggttt 779629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 302
Target Start/End: Complemental strand, 26757901 - 26757593
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatg------tttaattttgggcataaccataa--gtttgtgtgaggtaggataatat 103  Q
    |||||||| ||||||||||||||||||||||||  | |||||||||      |||||||||| || ||| |||||  || |||||| || ||||||||||    
T  26757901 tgagatgatgatgagagaaagtgaatgaattaaggagtattttatgttgaactttaattttgagcttaatcataagtgtgtgtgtgtggaaggataatat 26757802  T
Q  104 tagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgat 203  Q
    || ||||||   ||||| |||||  ||||| |  ||| |||| ||    ||||||| |||| |||| ||| ||||| ||||||  || |||| ||| | |    
T  26757801 tactaaaatggagagtgaggttactatcggttcagtttatcgattctttggatctcaaaattaaaatccaagaaccgaaccaatctatatcgatttaggt 26757702  T
Q  204 tggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttc----------ggtttggactttcgatttcattggttttgtacgaaccactt 293  Q
    |||||||  || |||| ||||  |||||| ||| |||| ||| ||||||          | |||||| ||||||||||||||||||||| | ||||||||    
T  26757701 tggttcggttcagttttaaactaaaccaaacaacgtcgaatactttttcgattttgtttgatttggattttcgatttcattggttttgtccaaaccactt 26757602  T
Q  294 acaccccta 302  Q
    |||||||||    
T  26757601 acaccccta 26757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 46892884 - 46892755
Alignment:
Q  20 agatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaata 113  Q
    |||||||||||||||||||||||||  | |||||||||||      |||||||| |   || | ||||| ||||||| |  ||||||||||| ||||||     
T  46892884 agatgagagaaagtgaatgaattaaggagtattttatgttgaactttaattttgagatcaatcgtaagtgtgtgtgatgagggataatattactaaaatg 46892785  T
Q  114 aggagtgtggttatcatcggattggttcat 143  Q
    ||||||| ||||| |||||| |||||||||    
T  46892784 aggagtgaggttagcatcggtttggttcat 46892755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 303
Target Start/End: Complemental strand, 22240724 - 22240516
Alignment:
Q  95 ggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatc 194  Q
    ||||| |||||| ||||||  ||||| | |||||||||| |||||| ||||||| |  ||||||| ||||| ||||||  ||| | |||| |   || ||    
T  22240724 ggatagtattagaaaaatagagagtgagattatcatcggtttggtttatcggttccttggatctcaaaatgtaaaaccgagaatcgaacccagcaaggtc 22240625  T
Q  195 ggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccactta 294  Q
    | ||| | ||||||||  ||| ||   |||| |||||  || ||||||||| ||||||||||||  ||||||||||||| |||||||  |||| | ||||    
T  22240624 gatttagtttggttcggttcgattatgaacctaaccagacatggtcggatactttttcggtttgacctttcgatttcatcggttttgaccgaatcgctta 22240525  T
Q  295 cacccctac 303  Q
    |||| ||||    
T  22240524 caccactac 22240516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 14 - 295
Target Start/End: Original strand, 1729 - 2013
Alignment:
Q  14 agatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatattagt 107  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||      |||||||   | ||||||||||||||||  |||||| |||||||||||    
T  1729 agatgatgatgagagaaagtgaatggattaaaaagtattttatgttggattttaattttaacc-taaccataagtttgtg--aggtagaataatattagt 1825  T
Q  108 aaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggt 207  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| |||| |||||||    
T  1826 aaaataaggagtgttgttatcatcggattggttcatcggtttcacgaatctcgaaattaaaaaccatgaaccaaaccaaagtagatcagttttgattggt 1925  T
Q  208 tcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttac 295  Q
    ||  |||| |||||||||||||||| |||||||||||||||||||  |||| ||||| | |||| ||| |||||| ||||||||||||    
T  1926 tccgatcgatttcaaaccgaaccaaacaaggtcggatattttttcaatttgaacttttggtttcgttgattttgtccgaaccacttac 2013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 58 - 302
Target Start/End: Complemental strand, 14000 - 13756
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    ||||||||||||||||  ||||||| ||||||| |  | |||||| |||||||||  |||||| ||||| |||||| | | |||||||||||   |||||    
T  14000 tttaattttgggcatactcataagtgtgtgtgaagaggtataataatagtaaaatggggagtgaggttagcatcggttcgattcatcggtttattggatc 13901  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggttt 257  Q
    || ||||||||||||   ||||||||||||  ||||| |||| ||||||||||  ||| |||  ||| ||||||  |||||||| |||  ||| ||||||    
T  13900 tcaaaatgaaaaaccgataaccaaaccaaataagatcagtttagattggttcggttcgattttgaactgaaccagacaaggtcgaatacatttccggttt 13801  T
Q  258 ggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||   |||||||| |||||| |||||| ||||||||||||    
T  13800 ggacttttagtttcattgattttgtccgaaccgcttacaccccta 13756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 33776 - 33729
Alignment:
Q  255 tttggactttcgatttcattggttttgtacgaaccacttacaccccta 302  Q
    |||||||||||  ||||||||||||| | |||||||||||||||||||    
T  33776 tttggactttcagtttcattggttttatccgaaccacttacaccccta 33729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 245
Target Start/End: Complemental strand, 11846494 - 11846307
Alignment:
Q  58 tttaattttgggcataaccataagtttgtgtgaggtaggataatattagtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatc 157  Q
    |||||||||| || ||| ||||||| |||||||||  ||||||||||| ||||||  |||||| || || ||||   ||||||||| ||||    |||||    
T  11846494 tttaattttgagcttaatcataagtgtgtgtgaggagggataatattactaaaatggggagtgaggatagcatcaatttggttcattggttcattggatc 11846395  T
Q  158 tcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggata 245  Q
    || |||| |||||||  ||||| ||||||| |||||||||||   |||||||   |||||||  |||| |||||| ||||||||||||    
T  11846394 tcaaaattaaaaaccgagaaccgaaccaaactagatcggtttaagttggttcagttcggttttgaaccaaaccaaacaaggtcggata 11846307  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 9827043 - 9826817
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt------taattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    |||||||| |||| |||||||||||||||||||  | |||||||||||      |||| ||| || ||| ||||||  |||||||||  |||||||||||    
T  9827043 tgagatgatgatgggagaaagtgaatgaattaaggagtattttatgttggactttaatattgagcttaatcataagcgtgtgtgaggagggataatatta 9826944  T
Q  106 gtaaaataaggagtgtggttatcatcggattggttcatcggtttcacggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattg 205  Q
     |||||   | |||| ||||| |||| | ||||||||||||||    |||| || |||| |||||||  ||| | ||||||| |||||||||||   |||    
T  9826943 ctaaaacgggaagtgaggttaacatcagtttggttcatcggttctttggatttcaaaattaaaaaccgagaatcgaaccaaactagatcggtttatgttg 9826844  T
Q  206 gttcgaatcggtttcaaaccgaaccaa 232  Q
    |||||  |||||||  |||||||||||    
T  9826843 gttcggttcggttttcaaccgaaccaa 9826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 1208864 - 1208739
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatg------tttaattttgggcataaccataagtttgtgtgaggtaggataatatta 105  Q
    |||||||| |||||| |||||||||||||||||  | |||||||||      ||||||||||||| |||  |||||| ||||||| |  |||||| ||||    
T  1208864 tgagatgatgatgagggaaagtgaatgaattaagtagtattttatgctgaactttaattttgggcctaatgataagtgtgtgtgaagagggataacatta 1208765  T
Q  106 gtaaaataaggagtgtggttatcatc 131  Q
    |||||| |||||||| ||||| ||||    
T  1208764 gtaaaacaaggagtggggttagcatc 1208739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 5416331 - 5416284
Alignment:
Q  12 tgagatgaagatgagagaaagtgaatgaattaaaaaatattttatgtt 59  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||    
T  5416331 tgagatgatgatgagagaaagtgaatgaattaaagactattttatgtt 5416284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 23301570 - 23301464
Alignment:
Q  153 ggatctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttc 252  Q
    ||||||| |||| ||||||   ||||| ||||||| |||||| |||| | ||||||||  |||||||  ||||||||||| |||||||| ||  ||||||    
T  23301570 ggatctcaaaattaaaaactgagaaccgaaccaaactagatcagtttaggttggttcggttcggttttgaaccgaaccaaacaaggtcgaattatttttc 23301471  T
Q  253 ggtttgg 259  Q
    |||||||    
T  23301470 ggtttgg 23301464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 303
Target Start/End: Complemental strand, 23585990 - 23585862
Alignment:
Q  175 gaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaaccaagcaaggtcggatattttttcggtttggactttcgatttcatt 274  Q
    ||||||||||||| || ||||||||   || ||| |  |||||||  |||||||| || |||||||||||| ||||||  ||| || ||||  ||||||     
T  23585990 gaaccaaaccaaactatatcggtttacgttagtttggttcggttttgaaccgaacaaaacaaggtcggatactttttctatttagattttcagtttcatc 23585891  T
Q  275 ggttttgtacgaaccacttacacccctac 303  Q
    |||||||| | ||| ||||||||||||||    
T  23585890 ggttttgtccaaactacttacacccctac 23585862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 2453993 - 2454036
Alignment:
Q  16 atgaagatgagagaaagtgaatgaattaaaaaatattttatgtt 59  Q
    |||| |||| ||||||||||||||||||| ||||||||||||||    
T  2453993 atgatgatgggagaaagtgaatgaattaagaaatattttatgtt 2454036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 26186588 - 26186634
Alignment:
Q  14 agatgaagatgagagaaagtgaatgaattaaaaaatattttatgttt 60  Q
    |||||| ||||||||||||||||||||||||| | ||||||| ||||    
T  26186588 agatgatgatgagagaaagtgaatgaattaaagagtattttaagttt 26186634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 344452 - 344518
Alignment:
Q  237 ggtcggatattttttcggtttggactttcgatttcattggttttgtacgaaccacttacacccctac 303  Q
    ||||| ||| ||||| |||||||| ||||| ||||||   |||||| ||||||||||||||||||||    
T  344452 ggtcgaatacttttttggtttggattttcggtttcatcacttttgtccgaaccacttacacccctac 344518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 6472 - 6366
Alignment:
Q  155 atctcgaaatgaaaaaccatgaaccaaaccaaaatagatcggtttcgattggttcgaatcggtttcaaaccgaacca----agcaaggtcggatattttt 250  Q
    ||||| |||| |||||||  |||||| | |||| ||||||||||| | ||||||||| ||  ||| |||||||||||    ||| |||||||||| ||||    
T  6472 atctcaaaattaaaaaccgagaaccagatcaaactagatcggtttaggttggttcgattcaattttaaaccgaaccaaactagctaggtcggatactttt 6373  T
Q  251 tcggttt 257  Q
    |||||||    
T  6372 tcggttt 6366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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