View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11820_low_5 (Length: 328)

Name: NF11820_low_5
Description: NF11820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11820_low_5
NF11820_low_5
[»] chr8 (18 HSPs)
chr8 (1-135)||(2270738-2270872)
chr8 (223-328)||(2271240-2271345)
chr8 (127-196)||(2270967-2271036)
chr8 (223-306)||(26021441-26021524)
chr8 (223-306)||(22324641-22324724)
chr8 (223-306)||(35806839-35806922)
chr8 (223-306)||(42013917-42014000)
chr8 (223-306)||(42072473-42072556)
chr8 (233-307)||(16818972-16819046)
chr8 (223-301)||(21525403-21525481)
chr8 (228-301)||(43282856-43282929)
chr8 (223-306)||(33934369-33934452)
chr8 (227-307)||(16523155-16523235)
chr8 (223-299)||(24065318-24065394)
chr8 (230-307)||(19334835-19334912)
chr8 (231-301)||(10112100-10112170)
chr8 (223-293)||(21488111-21488181)
chr8 (241-301)||(2824187-2824247)
[»] chr3 (25 HSPs)
chr3 (223-324)||(43347318-43347419)
chr3 (223-307)||(1781807-1781891)
chr3 (223-309)||(10839377-10839463)
chr3 (223-293)||(20382564-20382634)
chr3 (223-307)||(22845361-22845445)
chr3 (223-306)||(21853242-21853325)
chr3 (223-305)||(19649373-19649455)
chr3 (223-301)||(40845922-40846000)
chr3 (223-301)||(54546949-54547027)
chr3 (223-306)||(44994968-44995052)
chr3 (223-306)||(8950504-8950587)
chr3 (223-306)||(32352892-32352975)
chr3 (223-301)||(8926811-8926889)
chr3 (223-301)||(36539677-36539755)
chr3 (223-320)||(3178748-3178845)
chr3 (241-301)||(27642723-27642783)
chr3 (223-294)||(5391502-5391573)
chr3 (223-306)||(13856144-13856227)
chr3 (223-293)||(23467507-23467577)
chr3 (223-307)||(46685783-46685866)
chr3 (223-301)||(6280364-6280442)
chr3 (223-301)||(33103788-33103866)
chr3 (223-306)||(51336254-51336337)
chr3 (243-301)||(50663199-50663257)
chr3 (223-272)||(47889771-47889820)
[»] chr4 (26 HSPs)
chr4 (223-301)||(47084057-47084135)
chr4 (223-307)||(10094392-10094476)
chr4 (223-306)||(1535816-1535899)
chr4 (223-306)||(49284402-49284485)
chr4 (223-301)||(9742538-9742616)
chr4 (222-307)||(12792230-12792315)
chr4 (223-307)||(17888549-17888633)
chr4 (223-306)||(34241038-34241121)
chr4 (223-306)||(36012185-36012268)
chr4 (223-309)||(20818612-20818698)
chr4 (223-300)||(31377435-31377512)
chr4 (229-301)||(11054507-11054579)
chr4 (223-306)||(25954795-25954878)
chr4 (223-306)||(35018981-35019063)
chr4 (223-307)||(46474039-46474123)
chr4 (223-301)||(50328841-50328919)
chr4 (223-293)||(52632563-52632633)
chr4 (223-301)||(54090225-54090303)
chr4 (255-301)||(19124743-19124789)
chr4 (248-306)||(36851387-36851445)
chr4 (223-293)||(46583554-46583624)
chr4 (223-271)||(322584-322632)
chr4 (223-306)||(16338213-16338296)
chr4 (226-293)||(33982052-33982119)
chr4 (223-309)||(35322701-35322787)
chr4 (223-301)||(37801269-37801347)
[»] chr6 (13 HSPs)
chr6 (230-306)||(28750650-28750726)
chr6 (223-324)||(34103730-34103831)
chr6 (223-306)||(1727933-1728016)
chr6 (223-306)||(9231854-9231937)
chr6 (223-306)||(13627585-13627668)
chr6 (223-306)||(14309798-14309881)
chr6 (223-306)||(24694651-24694734)
chr6 (223-301)||(13103123-13103201)
chr6 (234-307)||(24497573-24497646)
chr6 (223-309)||(27863744-27863831)
chr6 (252-306)||(11084664-11084718)
chr6 (222-272)||(11212715-11212765)
chr6 (229-270)||(8412717-8412758)
[»] chr5 (24 HSPs)
chr5 (223-301)||(10081190-10081268)
chr5 (223-307)||(8456962-8457046)
chr5 (223-322)||(36769058-36769157)
chr5 (223-306)||(38397643-38397726)
chr5 (223-306)||(39862487-39862570)
chr5 (223-300)||(23218530-23218607)
chr5 (223-306)||(6257410-6257493)
chr5 (223-306)||(37169033-37169116)
chr5 (223-301)||(614397-614475)
chr5 (223-301)||(27916185-27916263)
chr5 (223-301)||(42119667-42119745)
chr5 (223-316)||(33271260-33271353)
chr5 (223-307)||(11856340-11856424)
chr5 (223-307)||(3341119-3341203)
chr5 (223-309)||(9737978-9738066)
chr5 (224-309)||(29790216-29790301)
chr5 (223-307)||(10115205-10115289)
chr5 (248-324)||(33188305-33188381)
chr5 (223-307)||(6174789-6174875)
chr5 (226-301)||(25560332-25560407)
chr5 (230-307)||(10052499-10052576)
chr5 (223-306)||(16618570-16618653)
chr5 (223-306)||(15631658-15631742)
chr5 (223-270)||(19322058-19322105)
[»] chr1 (21 HSPs)
chr1 (223-301)||(7742784-7742862)
chr1 (223-301)||(5558354-5558431)
chr1 (223-307)||(10907647-10907731)
chr1 (223-307)||(38859896-38859980)
chr1 (223-306)||(49902513-49902596)
chr1 (230-307)||(42456624-42456701)
chr1 (223-306)||(3346831-3346914)
chr1 (223-306)||(48392406-48392489)
chr1 (223-306)||(5975033-5975116)
chr1 (223-306)||(47022747-47022830)
chr1 (223-306)||(42517294-42517381)
chr1 (223-306)||(10156016-10156099)
chr1 (230-293)||(29149561-29149624)
chr1 (223-301)||(26511639-26511716)
chr1 (223-301)||(26835383-26835461)
chr1 (223-309)||(30745389-30745475)
chr1 (223-309)||(30766840-30766926)
chr1 (223-324)||(14796921-14797022)
chr1 (223-324)||(14805795-14805896)
chr1 (221-299)||(13131939-13132017)
chr1 (242-300)||(37189704-37189762)
[»] chr7 (17 HSPs)
chr7 (223-307)||(19334559-19334643)
chr7 (223-306)||(10576718-10576801)
chr7 (223-306)||(34259563-34259646)
chr7 (223-306)||(34707161-34707244)
chr7 (223-309)||(17303111-17303197)
chr7 (227-307)||(10334227-10334307)
chr7 (223-301)||(9770704-9770782)
chr7 (223-301)||(15017818-15017896)
chr7 (223-306)||(24320439-24320522)
chr7 (223-307)||(33057656-33057740)
chr7 (223-306)||(29238143-29238226)
chr7 (223-306)||(32876530-32876613)
chr7 (223-306)||(44164743-44164826)
chr7 (223-299)||(29981120-29981196)
chr7 (253-301)||(43342485-43342533)
chr7 (223-294)||(29555951-29556022)
chr7 (223-301)||(26284383-26284461)
[»] chr2 (17 HSPs)
chr2 (223-306)||(14942044-14942127)
chr2 (223-306)||(42769758-42769841)
chr2 (223-301)||(6318463-6318541)
chr2 (223-306)||(19181593-19181676)
chr2 (223-306)||(29846487-29846570)
chr2 (223-306)||(43139792-43139875)
chr2 (223-309)||(14539701-14539787)
chr2 (234-307)||(28321702-28321775)
chr2 (230-306)||(14186438-14186514)
chr2 (223-306)||(40277288-40277371)
chr2 (223-272)||(1387322-1387371)
chr2 (223-296)||(41674716-41674789)
chr2 (222-301)||(33009717-33009796)
chr2 (278-313)||(1386155-1386190)
chr2 (223-301)||(40780100-40780179)
chr2 (223-301)||(2888086-2888164)
chr2 (230-294)||(3956624-3956688)
[»] scaffold0086 (1 HSPs)
scaffold0086 (223-301)||(20836-20914)
[»] scaffold0045 (1 HSPs)
scaffold0045 (223-301)||(34457-34535)
[»] scaffold0079 (1 HSPs)
scaffold0079 (223-306)||(54564-54647)


Alignment Details
Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2270738 - 2270872
Alignment:
Q  1 ggtgtagtaaataataaaattaagaatttcaaattttttgatataaatgagggctaaaatgcacaaaaaagagagaaccacgagaaaatcaaacgagagg 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  2270738 ggtgtagtaaataataagattaagaatttcaaattttttgatataaatgagggctaaaatgcccaaaaaagagagaaccacgagaaattcaaacgagagg 2270837  T
Q  101 tggagacgtactacataaataaatgaaatacaaat 135  Q
    |||||||||||||||||||||||||||||||||||    
T  2270838 tggagacgtactacataaataaatgaaatacaaat 2270872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 2271240 - 2271345
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaa 322  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||| |||||| |||||    
T  2271240 aaaaatctaaagaaattacctaatatataggggtttatataagaaattcagcatgatttacataagaaattgcaaaaaaattaggtctgagtccggacaa 2271339  T
Q  323 cttccc 328  Q
    ||||||    
T  2271340 cttccc 2271345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 2270967 - 2271036
Alignment:
Q  127 aatacaaatgatacacctttaccgaccaaacaaatattctatccgttctaaaatgagtgttgttttaact 196  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2270967 aatacaaatgatacatctttaccgaccaaacaaatactctatccgttctaaaatgagtgttgttttaact 2271036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 26021441 - 26021524
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  26021441 aaaaatgtaaagaaattacccaatttataggggtttatataagaaattcatagggatttacaaaagaaattgcaaaaaatttgg 26021524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 22324641 - 22324724
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||| ||||||| ||||    
T  22324641 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattacaaaaaatttgg 22324724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 35806839 - 35806922
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||    |||||||| |||||||||||||||| ||||    
T  35806839 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagagatttacacaagaaattgcaaaaaatttgg 35806922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 42013917 - 42014000
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||| ||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  42013917 aaaaatataaagaaattgcccaatttataggagtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 42014000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 42072473 - 42072556
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  42072473 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaaattgg 42072556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 233 - 307
Target Start/End: Complemental strand, 16819046 - 16818972
Alignment:
Q  233 agaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||| |||||||||||||||||||||||||    |||||||| |||||||||||||||| |||||    
T  16819046 agaaattacccaatttataggggtttatataagaaattcaaggagatttacaaaagaaattgcaaaaaatttggg 16818972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 21525403 - 21525481
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   ||||||||| ||||||||||||||||    
T  21525403 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaa 21525481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 228 - 301
Target Start/End: Complemental strand, 43282929 - 43282856
Alignment:
Q  228 tctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||||||| || ||||||||||||||||| ||||||    
T  43282929 tctaatgaaattacccaatttatagggatttatataataaattcagaagaatttacataagaaattgtaaaaaa 43282856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 33934452 - 33934369
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||| ||||| |||||| |||||||||||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  33934452 aaaaatataaaaaaattgcccaatttataggggtttatataagaaattcataggaatttacaaaagaaattgcaaaaaatttgg 33934369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 16523155 - 16523235
Alignment:
Q  227 atctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||| || |||||| ||||||| |||||||||||||||||   ||||||||||| ||||||| |||||| |||||    
T  16523155 atctaaagaagttgcccaatttatagggatttatataagaaattcatagggatttacatatgaaattgtaaaaaatttggg 16523235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 24065318 - 24065394
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaa 299  Q
    ||||| ||||||||||| |||||| |||||| ||||||||||||||||||    |||||| || |||||||||||||    
T  24065318 aaaaagctaaagaaattgcccaatttataggagtttatataagaaattcatagagatttatatgagaaattgcaaaa 24065394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 19334835 - 19334912
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||  | ||| ||||| ||||||||||| |||||||  || ||||| |||||||||||||||||| |||||    
T  19334835 taaagaaattgtctaatttatagaggtttatataaaaaattcataagaatttatataagaaattgcaaaaaatttggg 19334912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 301
Target Start/End: Original strand, 10112100 - 10112170
Alignment:
Q  231 aaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||  ||||| |||| | |||||||||||||||| ||  | |||||||||| |||||||||||||    
T  10112100 aaagaaattgtccaatttataagagtttatataagaaattaagaggaatttacataaaaaattgcaaaaaa 10112170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 21488111 - 21488181
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    |||||||||||||||||  ||||| ||| ||||||| |||||||||||||   | ||||||| ||||||||    
T  21488111 aaaaatctaaagaaattgtccaatttatcggggtttctataagaaattcaaaggaatttacacaagaaatt 21488181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 2824247 - 2824187
Alignment:
Q  241 cccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||| ||| |||||||||||||| ||  | |||||||||| |||||||||||||    
T  2824247 cccaatttataaggggttatataagaaatttagaggaatttacataaaaaattgcaaaaaa 2824187  T

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Target: chr3 (Bit Score: 62; Significance: 9e-27; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 43347419 - 43347318
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaa 322  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||| ||| || |||||    
T  43347419 aaaaatctaaagaaattgcccaatttgtaggggtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggtcggagcccggacaa 43347320  T
Q  323 ct 324  Q
    ||    
T  43347319 ct 43347318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 1781807 - 1781891
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  1781807 aaaaatctaaagaaattgcccaatttattggggtttatataagaaattcagagggatttacataagaaattgcaaaaaatttggg 1781891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 10839463 - 10839377
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||||||||||    |||||||||||||||||||||||| |||||||    
T  10839463 aaaaatctaaagaaattgcccaatttatagaggtttatataagaaattcagagaaatttacataagaaattgcaaaaaatttgggtc 10839377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 20382564 - 20382634
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||   ||||||||||||||||||    
T  20382564 aaaaatctaaagaaatttcccaatttataggggtttatataagaaattcatagggatttacataagaaatt 20382634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 22845445 - 22845361
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||||||  | ||| ||||||||||||||||||||||| ||  | |||||||||||||||||||||||| |||||    
T  22845445 aaaaatctaaagaaattgtcaaatttataggggtttatataagaaatttaggtgaatttacataagaaattgcaaaaaatttggg 22845361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 21853242 - 21853325
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  21853242 aaaaatgtaaagaaattgcccaatttatagggttttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 21853325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 19649455 - 19649373
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttg 305  Q
    |||||||||||||||||  ||||| |||| ||||||||||||||||||||    ||||||||||||||||| |||||||||||    
T  19649455 aaaaatctaaagaaattgtccaatttataagggtttatataagaaattcatagcgatttacataagaaattacaaaaaagttg 19649373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 40846000 - 40845922
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| || |||||||||||||    
T  40846000 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaattgcaaaaaa 40845922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 54546949 - 54547027
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||   | |||||| |||||||||||||||||    
T  54546949 aaaaatctaaagaaattgtccaatttataggggtttatataagaaattcaaaggaatttacgtaagaaattgcaaaaaa 54547027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 44995052 - 44994968
Alignment:
Q  223 aaaaatctaaagaaattacccaatatata-ggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||| |||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  44995052 aaaaatgtaaagaaattgcccaatttataaggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 44994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 8950587 - 8950504
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  8950587 aaaaatgtaaagaaattgcccaatttatagggatttatataagaaattcataggaatttacacaagaaattgcaaaaaatttgg 8950504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 32352892 - 32352975
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| || ||| |||||||||||||||||||||||||   ||||||| | |||||||||||||||| ||||    
T  32352892 aaaaatgtaaagaaattgcctaatttataggggtttatataagaaattcatagggatttatacaagaaattgcaaaaaaattgg 32352975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 8926811 - 8926889
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||| ||||||| || ||| ||||||||||||||| ||||||||||  | ||||||||| ||||||||||||||    
T  8926811 aaaaatctacagaaattgccaaatttataggggtttatatcagaaattcagaggaatttacatatgaaattgcaaaaaa 8926889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 36539677 - 36539755
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||||||||| |||||| |||||||| |||||||||||||| |   ||||||||||||||||||||| ||||    
T  36539677 aaaaatttaaagaaattgcccaatttataggggattatataagaaatttatagggatttacataagaaattgcataaaa 36539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 320
Target Start/End: Original strand, 3178748 - 3178845
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagac 320  Q
    ||||| ||||||||||| |||||| ||||| | |||||||||||||||||   ||||||||| ||||||||| |||||| ||||| | ||| ||||||    
T  3178748 aaaaaactaaagaaattgcccaatttatagagatttatataagaaattcatagggatttacacaagaaattgaaaaaaatttgggccggagcccagac 3178845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 27642723 - 27642783
Alignment:
Q  241 cccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||| || |||||||||||||||||  |||||||||||||||||||||||||||    
T  27642723 cccaatttataaggatttatataagaaattcaaaaggatttacataagaaattgcaaaaaa 27642783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 5391502 - 5391573
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattg 294  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   ||||||||| |||||||||    
T  5391502 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattg 5391573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 13856144 - 13856227
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| ||||||| |||||||||||||||||   ||||||||| ||||||||| |||||| ||||    
T  13856144 aaaaatgtaaagaaattgtccaatttatagggatttatataagaaattcatagggatttacacaagaaattgaaaaaaatttgg 13856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 23467577 - 23467507
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| || |||||    
T  23467577 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaatt 23467507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 46685866 - 46685783
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||| ||||||||||  | ||| |||||| |||||||||||||||| ||  |||||||||||||||| ||||||||| |||||    
T  46685866 aaaaatataaagaaattgtcaaatttataggagtttatataagaaatttagggggatttacataagaaa-tgcaaaaaatttggg 46685783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 6280442 - 6280364
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||| |||||  | ||| ||||| ||||||||||||||||||||    ||||||||||||||||||| ||||    
T  6280442 aaaaatctaaataaattgtcaaatttatagaggtttatataagaaattcagggaaatttacataagaaattgcacaaaa 6280364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 33103788 - 33103866
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||| |||||| ||||| |||||||  |||||||||||||| |   | ||||||||||||||||||||||||    
T  33103788 aaaaatttaaataaattatccaatttatagggacttatataagaaatttaagggaatttacataagaaattgcaaaaaa 33103866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 51336254 - 51336337
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  | ||| ||||  | ||||||||| |||||||| || |||||||||| ||||||||||||| ||||    
T  51336254 aaaaatttaaagaaattgtcaaatttataaagatttatataaaaaattcaggagaatttacataaaaaattgcaaaaaaattgg 51336337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 50663199 - 50663257
Alignment:
Q  243 caatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||| |||| |||||||||||||||||| ||  | || |||||||||||||||||||||    
T  50663199 caatttataagggtttatataagaaatttagaggaatctacataagaaattgcaaaaaa 50663257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 272
Target Start/End: Original strand, 47889771 - 47889820
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattca 272  Q
    |||||| |||||||||| |||||| ||||||  |||||||||||||||||    
T  47889771 aaaaatttaaagaaattgcccaatttataggaatttatataagaaattca 47889820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 47084057 - 47084135
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  47084057 aaaaatctaaagaaattacccaatttataggggtttatataagaaattcagagaaatttacataagaaattgcaaaaaa 47084135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 10094476 - 10094392
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||    |||||||||||||||| ||||||| |||||    
T  10094476 aaaaatctaaataaattacccaatttataggggtttatataagaaattcagagaaatttacataagaaattacaaaaaatttggg 10094392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 1535816 - 1535899
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  1535816 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 1535899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 49284402 - 49284485
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  49284402 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 49284485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 9742616 - 9742538
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||||||  | ||||||||||||||||| ||||||    
T  9742616 aaaaatctaaagaaattgcccaatttataggggttaatataagaaattcagaggaatttacataagaaattgtaaaaaa 9742538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 12792315 - 12792230
Alignment:
Q  222 taaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||||    |||||||||||||||| ||||||| |||||    
T  12792315 taaaaatctaaagtaattgcccaatttataggggtttatataagaaattcagagaaatttacataagaaattacaaaaaaattggg 12792230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 17888633 - 17888549
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||||   | ||||||||||||||||| |||||| |||||    
T  17888633 aaaaatctaaagaaattgcccaatttatagggggttatataagaaattcataggaatttacataagaaattgaaaaaaatttggg 17888549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 34241038 - 34241121
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   |||| |||| |||||||||||||||| ||||    
T  34241038 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatctacacaagaaattgcaaaaaatttgg 34241121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 36012268 - 36012185
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| || ||||||||||||| ||||    
T  36012268 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttgg 36012185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 20818612 - 20818698
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    ||||||||||| |||||  ||||| |||||| ||||||||||||||||||   ||||||||| |||||||||||||||| |||||||    
T  20818612 aaaaatctaaaaaaattgaccaatttataggagtttatataagaaattcatagggatttacaaaagaaattgcaaaaaatttgggtc 20818698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 31377435 - 31377512
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaa 300  Q
    ||||||||||||||||| |||||| ||||| || ||||||||||||||||   ||||||||||||||||||| |||||    
T  31377435 aaaaatctaaagaaattgcccaatttatagagggttatataagaaattcatagggatttacataagaaattgaaaaaa 31377512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 11054507 - 11054579
Alignment:
Q  229 ctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||| ||| |||||| ||||| |||||||||||||||||||   ||||||||||||||||||||||||||    
T  11054507 ctaaagagattgcccaatttatagaggtttatataagaaattcatagggatttacataagaaattgcaaaaaa 11054579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 25954795 - 25954878
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||| ||||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  25954795 aaaaatgtaaagaaattgcccaatttataggagtttatataagaaattcataggaatttacacaagaaattgcaaaaaatttgg 25954878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 35018981 - 35019063
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||||| ||| |||| ||||||||||||||||||||  |||||||||| ||||||||| |||||| ||||    
T  35018981 aaaaatgtaaagaaattacctaatttataagggtttatataagaaattca-taggatttacacaagaaattgtaaaaaatttgg 35019063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 46474039 - 46474123
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcagg-atttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||||||   |||| |||| |||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||    
T  46474039 aaaaatctaaagaaattgtacaatttatatgggtttatataaaaaattca-caggaatttacataagaaattgcaaaaaatttggg 46474123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 50328841 - 50328919
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| ||||||||||  ||||| ||||| ||||||||||||||||| ||  | ||||||| ||||||||||||||||    
T  50328841 aaaaatttaaagaaattgtccaatttatagaggtttatataagaaattaagaggaatttacaaaagaaattgcaaaaaa 50328919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 293
Target Start/End: Original strand, 52632563 - 52632633
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||||||   ||||||||| ||||||||    
T  52632563 aaaaatgtaaagaaattgcccaatttatagggatttatataagaaattcatagggatttacacaagaaatt 52632633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 54090225 - 54090303
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||| ||||| |||||| |||| | |||||||||| ||||||||  ||||||||| ||| ||||||||||||    
T  54090225 aaaaatctaaaaaaattgcccaatttataagagtttatataataaattcagagggatttacaaaaggaattgcaaaaaa 54090303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 301
Target Start/End: Complemental strand, 19124789 - 19124743
Alignment:
Q  255 gtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||    
T  19124789 gtttatataagaaattcagaggaatttacataagaaattgcaaaaaa 19124743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 36851445 - 36851387
Alignment:
Q  248 tataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    ||||||||||||||||| |||||||   ||||||||| |||||||||||||||| ||||    
T  36851445 tataggggtttatataataaattcatagggatttacacaagaaattgcaaaaaatttgg 36851387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 293
Target Start/End: Complemental strand, 46583624 - 46583554
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    |||||| |||||||||| || ||| |||||||||||||||||||||||||   ||||||||| || |||||    
T  46583624 aaaaatgtaaagaaattgcctaatttataggggtttatataagaaattcatagggatttacacaaaaaatt 46583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 322632 - 322584
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattc 271  Q
    |||||| ||||||||||  ||||| ||||||||||||||||||||||||    
T  322632 aaaaatttaaagaaattgtccaatttataggggtttatataagaaattc 322584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 16338296 - 16338213
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| ||||||| ||||||||| |||||||   | ||||||| || ||||||||||||| ||||    
T  16338296 aaaaatgtaaagaaattgtccaatttatagggatttatataaaaaattcataggaatttacacaaaaaattgcaaaaaaattgg 16338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 293
Target Start/End: Original strand, 33982052 - 33982119
Alignment:
Q  226 aatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    ||||||||||||||| | ||| |||| | |||||||||||||||| ||  ||||||||| ||||||||    
T  33982052 aatctaaagaaattatctaatttataagagtttatataagaaatttagagggatttacaaaagaaatt 33982119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 35322787 - 35322701
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    |||||||||||||||||   |||| ||||| ||||||||||||| ||||||    ||||| |||| ||||| ||||||| |||||||    
T  35322787 aaaaatctaaagaaattgttcaatttatagaggtttatataagagattcagagaaatttatataaaaaattacaaaaaaattgggtc 35322701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 37801347 - 37801269
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| ||||||| || |||||| ||||||| ||||||||| |||||||     ||||||| ||||||||||||||||    
T  37801347 aaaaatgtaaagaatttgcccaatttatagggatttatataaaaaattcatagaaatttacacaagaaattgcaaaaaa 37801269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 28750726 - 28750650
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||||||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  28750726 taaagaaattgcccaatttataggggtttatataagaaattcagaagaatttacataagaaattgcaaaaaaattgg 28750650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 34103730 - 34103831
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaa 322  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||||||||  | |||||||||| ||||| |||||||  |||||| |||||| |||||    
T  34103730 aaaaatctaaagaaatttcccaatttatacgggtttatataagaaattcagaggaatttacataataaattacaaaaaacgtgggtcagagtccggacaa 34103829  T
Q  323 ct 324  Q
    ||    
T  34103830 ct 34103831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 1728016 - 1727933
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| | |||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  1728016 aaaaatgtaaagaaattgctcaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 1727933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 9231937 - 9231854
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||    |||||||| |||||||||||||||| ||||    
T  9231937 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagagatttacacaagaaattgcaaaaaaattgg 9231854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 13627585 - 13627668
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| | |||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  13627585 aaaaatgtaaagaaattgctcaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 13627668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 14309881 - 14309798
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| ||||||| |||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  14309881 aaaaatgtaaagaaattgcccaatttatagggatttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 14309798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 24694734 - 24694651
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||| ||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  24694734 aaaaatgtaaagaaattgcccaatttataggagtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 24694651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 13103201 - 13103123
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||||| |||||| ||||  ||||||||||||||||||||  | |||||||||| |||||||||||||    
T  13103201 aaaaatctaaagaaattgcccaatttataaaggtttatataagaaattcagaggaatttacataaaaaattgcaaaaaa 13103123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 24497646 - 24497573
Alignment:
Q  234 gaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||| |||||| ||||||||||||||||||||||||||  | ||||||| || ||||||||||||| |||||    
T  24497646 gaaattgcccaatttataggggtttatataagaaattcagaggaatttacacaaaaaattgcaaaaaatttggg 24497573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 27863744 - 27863831
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataag-aaattgcaaaaaagttgggtc 309  Q
    |||||||||||||||||  ||||| |||| |||||||||||||||||||||    ||||||||||| ||||||||||||  |||||||    
T  27863744 aaaaatctaaagaaattgtccaatttataagggtttatataagaaattcagagaaatttacataagaaaattgcaaaaagtttgggtc 27863831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 11084664 - 11084718
Alignment:
Q  252 ggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  11084664 ggggtttatataagaaattcataggaatttacacaagaaattgcaaaaaaattgg 11084718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 11212715 - 11212765
Alignment:
Q  222 taaaaatctaaagaaattacccaatatataggggtttatataagaaattca 272  Q
    |||||||||||||||||| |||||| ||||||| |||||| || |||||||    
T  11212715 taaaaatctaaagaaattgcccaatttatagggatttatagaaaaaattca 11212765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 8412758 - 8412717
Alignment:
Q  229 ctaaagaaattacccaatatataggggtttatataagaaatt 270  Q
    ||||||||||| |||||| |||||| ||||||||||||||||    
T  8412758 ctaaagaaattgcccaatttataggcgtttatataagaaatt 8412717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 10081190 - 10081268
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||   ||||||||||||||||||| ||||||    
T  10081190 aaaaatctaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacataagaaattgaaaaaaa 10081268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 8457046 - 8456962
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||||||||   ||||||||||||||||||| |||||| |||||    
T  8457046 aaaaatctaaagaaattgcccaatttatagggggttatataagaaattcatagggatttacataagaaattgaaaaaaatttggg 8456962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 36769157 - 36769058
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaa 322  Q
    ||||||||||||||||| || |||  |||| ||||||||||||||||||||  | |||||||||||||||||||||||| ||||| | |||||| |||||    
T  36769157 aaaaatctaaagaaattgcctaattcatagaggtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggccggagtccggacaa 36769058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 38397643 - 38397726
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  38397643 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 38397726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 39862570 - 39862487
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  39862570 aaaaatctaaagaaattgcccaatttataggggtttatataagaaattcataggaatttacacaagaaattgcaaaaaaattgg 39862487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 300
Target Start/End: Original strand, 23218530 - 23218607
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaa 300  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||    
T  23218530 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaa 23218607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 6257493 - 6257410
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| ||||||||||| |||||||||||||   ||||||||| |||||||||||||||| ||||    
T  6257493 aaaaatgtaaagaaattgcccaatttataggggtttgtataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 6257410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 37169116 - 37169033
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| || ||||||||||||| ||||    
T  37169116 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttgg 37169033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 614475 - 614397
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||||| || ||| ||||||| ||||||||| ||||||||  | ||||||||||||||||||||||||    
T  614475 aaaaatctaaagaaattgccaaatttatagggatttatataaaaaattcagaggaatttacataagaaattgcaaaaaa 614397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 27916185 - 27916263
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||| |||||| | |||| |||||| |||||||||||||||||||  | ||||||||||||||||||||||||    
T  27916185 aaaaatctaatgaaattgctcaatttataggagtttatataagaaattcagaggaatttacataagaaattgcaaaaaa 27916263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 42119667 - 42119745
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||  ||||| ||||| ||||||||||||||||||||  | |||||||||||||||| |||||||    
T  42119667 aaaaatctaaagaaattgtccaatttatagaggtttatataagaaattcagaggaatttacataagaaattacaaaaaa 42119745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 33271353 - 33271260
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtcc 316  Q
    |||||| ||||||||||  ||||| ||||| ||||||||||||||||||| | | ||||||||||||||||| |||||| ||||| | ||||||    
T  33271353 aaaaatataaagaaattgtccaatttatagaggtttatataagaaattcaacggaatttacataagaaattgtaaaaaaattgggccggagtcc 33271260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 11856340 - 11856424
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||||||| |||||| ||||| | ||||||||||||||||||   ||||||||||||||||| || |||| |||||    
T  11856340 aaaaatctaaagaaattgcccaatttatagtgatttatataagaaattcagagcgatttacataagaaattacagaaaacttggg 11856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 3341203 - 3341119
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaa-ttcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||| ||||||||||| |||||| |||||||| |||||||| ||| ||||| || |||||||||||||||||||||||| |||||    
T  3341203 aaaaagctaaagaaatttcccaatttataggggattatataaaaaaattcag-agaatttacataagaaattgcaaaaaatttggg 3341119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 9738066 - 9737978
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcagga--tttacataagaaattgcaaaaaagttgggtc 309  Q
    |||||||||||||||||  ||||| ||||||| |||||||||||||||||   |||  |||||||||||||||| |||||| |||||||    
T  9738066 aaaaatctaaagaaattgtccaatttatagggatttatataagaaattcatagggatttttacataagaaattgaaaaaaaattgggtc 9737978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 29790301 - 29790216
Alignment:
Q  224 aaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    |||| ||||||||||| |||||| ||||  |||||||||||||||||||  || ||||||||||||||||| |||||  |||||||    
T  29790301 aaaaactaaagaaattgcccaatttataaaggtttatataagaaattcataagaatttacataagaaattgtaaaaattttgggtc 29790216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 10115205 - 10115289
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||||||  | ||| ||| |||||||||||||||||| |||  | |||||||||| ||||||||||||| |||||    
T  10115205 aaaaatctaaagaaattgtctaatttattggggtttatataagaaatccagaggaatttacataaaaaattgcaaaaaaattggg 10115289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 33188381 - 33188305
Alignment:
Q  248 tataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaact 324  Q
    ||||||||||||||||||||||| ||  | ||||||||||||||||||||||   |||| || ||||||||||||||    
T  33188381 tataggggtttatataagaaatttagatgaatttacataagaaattgcaaaagttttggatcagagtccagacaact 33188305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 6174789 - 6174875
Alignment:
Q  223 aaaaatctaaagaaattacccaatatatagggg--tttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||| ||||||||||  ||||| ||||||||  |||||||||||||||||| || |||||| ||||||||| ||||||| |||||    
T  6174789 aaaaatataaagaaattgtccaatttataggggggtttatataagaaattcagaagaatttacgtaagaaattacaaaaaatttggg 6174875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 25560407 - 25560332
Alignment:
Q  226 aatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||  ||||| |||||  |||||||||||||||| |  |||||||||||||||||||| ||||||    
T  25560407 aatctaaagaaattgtccaatttatagatgtttatataagaaatttataaggatttacataagaaattgaaaaaaa 25560332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 10052576 - 10052499
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||| ||| |||||  ||||||||||| | |||||  ||||||||||||||||||| |||||| |||||    
T  10052576 taaagaaattacctaatttatagacgtttatataagtagttcagagggatttacataagaaattgtaaaaaaattggg 10052499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 16618653 - 16618570
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||| |||||  ||||| |||||| ||||||||||||||||||   ||||||||| ||||||||| |||||| ||||    
T  16618653 aaaaatataaaaaaattgtccaatttataggagtttatataagaaattcatagggatttacacaagaaattgtaaaaaatttgg 16618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 15631658 - 15631742
Alignment:
Q  223 aaaaatctaaagaaattacccaatatatagggg-tttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| |||||||| |||||||||||||||||   ||||||| | ||||||||| |||||| ||||    
T  15631658 aaaaatgtaaagaaattgtccaatttatagggggtttatataagaaattcatagggatttatacaagaaattgtaaaaaatttgg 15631742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 19322105 - 19322058
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaatt 270  Q
    |||||||||||| |||| |||||| |||||| ||||||||||||||||    
T  19322105 aaaaatctaaagtaattgcccaatttataggagtttatataagaaatt 19322058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 7742862 - 7742784
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||    
T  7742862 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcataaggatttacacaagaaattgcaaaaaa 7742784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 5558354 - 5558431
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  5558354 aaaaatctaaagaaattgtccaatttataggggtttatataagaaattcggaagg-tttacataagaaattgcaaaaaa 5558431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 10907731 - 10907647
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||||||  |  || ||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||    
T  10907731 aaaaatctaaagaaattgtctgatttataggggtttatataagaaattcagaggaatttacataagaaattgcaaaaaatttggg 10907647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 38859896 - 38859980
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||   | ||||||||||||||||| |||||| |||||    
T  38859896 aaaaatctaaaaaaattgcccaatttataggggtttatataagaaattcataggaatttacataagaaattgaaaaaaatttggg 38859980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 49902513 - 49902596
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| ||| || |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  49902513 aaaaatgtaaagaaattgccctatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 49902596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 42456624 - 42456701
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||| |||||| |||||||||||||||||||||||||   | ||||||||||||||| |||||||| |||||    
T  42456624 taaagaaattgcccaatttataggggtttatataagaaattcataggaatttacataagaaatagcaaaaaatttggg 42456701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 3346831 - 3346914
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   ||||||||| || ||||||||||||| ||||    
T  3346831 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaacaaattgcaaaaaatttgg 3346914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 48392489 - 48392406
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||| |||||| |||||| ||||||| |||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  48392489 aaaaatgtaatgaaattgcccaatttatagggatttatataagaaattcatagggatttacacaagaaattgcaaaaaaattgg 48392406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 5975033 - 5975116
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| || ||| ||||||||||||||||||||||||    ||||||||| ||||||||| |||||| ||||    
T  5975033 aaaaatgtaaagaaattgcctaatttataggggtttatataagaaattcttagggatttacacaagaaattgaaaaaaatttgg 5975116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 47022747 - 47022830
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| || ||| |||||| ||||||||||||||||||    |||||||| |||||||||||||||| ||||    
T  47022747 aaaaatataaagaaattgcctaatttataggagtttatataagaaattcatagagatttacacaagaaattgcaaaaaatttgg 47022830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 42517381 - 42517294
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggttt----atataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||    ||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  42517381 aaaaatgtaaagaaattgcccaatttataggggtttgtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 42517294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 10156099 - 10156016
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| |||||  ||||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  10156099 aaaaatataaagaaattgtccaatttatagaagtttatataagaaattcataggaatttacacaagaaattgcaaaaaaattgg 10156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 29149624 - 29149561
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaatt 293  Q
    |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| || |||||    
T  29149624 taaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaaaaaatt 29149561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 26511716 - 26511639
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||||||||||  |||| || |||  ||||||||||||||||||  || |||||||||||||||||||||||    
T  26511716 aaaaatttaaagaaattattcaatttacaggaatttatataagaaattcaggggg-tttacataagaaattgcaaaaaa 26511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 26835383 - 26835461
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||| |||||   |||| |||||| ||||||||||||||||||   | |||||||||| |||||||||||||    
T  26835383 aaaaatctaaaaaaattgttcaatttataggagtttatataagaaattcatatgaatttacataataaattgcaaaaaa 26835461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 30745389 - 30745475
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    |||||| ||||||||||  ||||| ||||||| |||||| |||||||||||    |||||||||| ||||||||||| | |||||||    
T  30745389 aaaaatttaaagaaattgtccaatttatagggatttataaaagaaattcagagaaatttacataaaaaattgcaaaatatttgggtc 30745475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 30766840 - 30766926
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    |||||| ||||||||||  ||||| ||||||| |||||| |||||||||||    |||||||||| ||||||||||| | |||||||    
T  30766840 aaaaatttaaagaaattgtccaatttatagggatttataaaagaaattcagagaaatttacataaaaaattgcaaaatatttgggtc 30766926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 14796921 - 14797022
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaa 322  Q
    |||||||||||| |||  || ||| |||| | || ||||||||||||||||  | |||||||||| ||||||||||||   |||||| ||| ||||||||    
T  14796921 aaaaatctaaagtaatggcctaatttataagtgtgtatataagaaattcagaggaatttacataaaaaattgcaaaaattatgggtcggagcccagacaa 14797020  T
Q  323 ct 324  Q
    ||    
T  14797021 ct 14797022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 14805795 - 14805896
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtccgagtccagacaa 322  Q
    |||||||||||| |||  || ||| |||| | || ||||||||||||||||  | |||||||||| ||||||||||||   |||||| ||| ||||||||    
T  14805795 aaaaatctaaagtaatggcctaatttataagtgtgtatataagaaattcagaggaatttacataaaaaattgcaaaaattatgggtcggagcccagacaa 14805894  T
Q  323 ct 324  Q
    ||    
T  14805895 ct 14805896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 13131939 - 13132017
Alignment:
Q  221 gtaaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaa 299  Q
    ||||||| |||||||||||  ||||| ||||| | ||||||||| ||||| ||  | |||||||||||||||| |||||    
T  13131939 gtaaaaagctaaagaaattgtccaatttatagtgatttatataaaaaatttagaggaatttacataagaaattacaaaa 13132017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 37189704 - 37189762
Alignment:
Q  242 ccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaa 300  Q
    ||||| ||||| | |||||||||||||||||    ||||||||||||||||||||||||    
T  37189704 ccaatttatagagatttatataagaaattcatagagatttacataagaaattgcaaaaa 37189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 19334643 - 19334559
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||   | |||||||||||||||||||||||| |||||    
T  19334643 aaaaatctaaagaaattgtccaatttataggggtttatataagaaattcataggtatttacataagaaattgcaaaaaaattggg 19334559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 10576718 - 10576801
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  10576718 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 10576801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 34259563 - 34259646
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  34259563 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaaattgg 34259646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 34707161 - 34707244
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  34707161 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 34707244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 17303197 - 17303111
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    ||||||||||||||||| |||||| || | ||||||||||||||||||||   | |||||||||||||||||||||||| |||||||    
T  17303197 aaaaatctaaagaaattgcccaatttacaagggtttatataagaaattcataggaatttacataagaaattgcaaaaaaattgggtc 17303111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 10334227 - 10334307
Alignment:
Q  227 atctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||||  | |||||||||||||||||||||||| |||||    
T  10334227 atctaaagaaattgcccaatttataagagtttatataagaaattcagaggaatttacataagaaattgcaaaaaaattggg 10334307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 9770704 - 9770782
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||| ||||||||||||  |||||  |||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  9770704 aaaagtctaaagaaattgtccaattcatagtggtttatataagaaattcaggatgatttacataagaaattgcaaaaaa 9770782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 15017818 - 15017896
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||  ||||| |||| | |||||||||||||||||||  | ||||||||||||||||||||||||    
T  15017818 aaaaatctaaagaaattgtccaatttatacgcgtttatataagaaattcagaggaatttacataagaaattgcaaaaaa 15017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 24320522 - 24320439
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcagg-atttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||| | ||| ||||||| |||||||||||||||| ||||    
T  24320522 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattc-gtaggaatttacacaagaaattgcaaaaaatttgg 24320439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 33057740 - 33057656
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||||||||||||||   |||| |||||||| ||||||||||||||||   ||||||||||||||||||| |||||| |||||    
T  33057740 aaaaatctaaagaaattgttcaatttataggggattatataagaaattcatagggatttacataagaaattgaaaaaaaattggg 33057656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 29238226 - 29238143
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| | |||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  29238226 aaaaatgtaaagaaattttccaatttttaggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaaattgg 29238143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 32876613 - 32876530
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   |||| |||| |||||||||||||||| ||||    
T  32876613 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatctacacaagaaattgcaaaaaatttgg 32876530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 44164826 - 44164743
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||     ||||||| |||||||||||||||| ||||    
T  44164826 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagaaatttacacaagaaattgcaaaaaatttgg 44164743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 29981196 - 29981120
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaa 299  Q
    |||||| ||||||||||  ||||| |||||  ||||||||||||||||||   ||||||||| ||||||||||||||    
T  29981196 aaaaatataaagaaattgtccaatttatagaagtttatataagaaattcatagggatttacacaagaaattgcaaaa 29981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 43342485 - 43342533
Alignment:
Q  253 gggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||||||||||||||||||  | ||||||||||||||||||||||||    
T  43342485 gggtttatataagaaattcagaggaatttacataagaaattgcaaaaaa 43342533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 294
Target Start/End: Complemental strand, 29556022 - 29555951
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattg 294  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   | ||||||| |||||||||    
T  29556022 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcataggaatttacacaagaaattg 29555951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 26284461 - 26284383
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggattt-acataagaaattgcaaaaaa 301  Q
    |||||||||||||||||  ||||| ||||   |||| ||||||||||||||  |||||| ||||||||||||||||||||    
T  26284461 aaaaatctaaagaaattgtccaatttatactagttt-tataagaaattcagagggattttacataagaaattgcaaaaaa 26284383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 14942127 - 14942044
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  14942127 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 14942044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 42769841 - 42769758
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  42769841 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 42769758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 6318541 - 6318463
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||   ||||||||||||||||||| ||||||    
T  6318541 aaaaatctaaagaaattgcccaatttatagggatttatataagaaattcatagggatttacataagaaattgaaaaaaa 6318463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 19181593 - 19181676
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| |||||||||||||||||||||||||   | ||||||| |||||||||||||||| ||||    
T  19181593 aaaaatgtaaagaaattgcccaatttataggggtttatataagaaattcataggaatttacacaagaaattgcaaaaaatttgg 19181676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 29846487 - 29846570
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| |||||||||||||||||||||||||   ||||||||| |||||||||||||||| ||||    
T  29846487 aaaaatgtaaagaaattgtccaatttataggggtttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgg 29846570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 43139792 - 43139875
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||| ||  | | |||||||||||||||||||||| ||||    
T  43139792 aaaaatctaaagaaattgctcaatttataggggtttatataagaaattaagaggaacttacataagaaattgcaaaaaaattgg 43139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 309
Target Start/End: Complemental strand, 14539787 - 14539701
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgggtc 309  Q
    ||||||||||||||||| || ||| ||||||  ||||||||||||||||||  | | |||||||||||||||||||||| |||||||    
T  14539787 aaaaatctaaagaaattgcctaatttataggaatttatataagaaattcagaggaaattacataagaaattgcaaaaaatttgggtc 14539701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 28321775 - 28321702
Alignment:
Q  234 gaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttggg 307  Q
    |||||| |||||| |||| |||||||||||||| |||||| || |||||||||||||||||||||||| |||||    
T  28321775 gaaattgcccaatttataagggtttatataagatattcaggagaatttacataagaaattgcaaaaaaattggg 28321702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 14186514 - 14186438
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||||||| |||||| |||||||||||||||||||||||||   ||||||||| |||||||| ||||||| ||||    
T  14186514 taaagaaattgcccaatttataggggtttatataagaaattcatagggatttacacaagaaattacaaaaaatttgg 14186438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 40277371 - 40277288
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| |||||||||| |||||| ||||||| ||||||||||||||| |   |||||||||||| ||||||||||||| ||||    
T  40277371 aaaaatgtaaagaaattgcccaatttatagggatttatataagaaatttatagggatttacataaaaaattgcaaaaaatttgg 40277288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 1387371 - 1387322
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattca 272  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  1387371 aaaaatctaaagaaattacccaatttataggggtttatctaagaaattca 1387322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 41674789 - 41674716
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgca 296  Q
    |||||||||||||||||  ||||| |||| |||||||||||| ||||||||   ||||||||||||||||||||    
T  41674789 aaaaatctaaagaaattgtccaatttataagggtttatataaaaaattcagagagatttacataagaaattgca 41674716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 33009717 - 33009796
Alignment:
Q  222 taaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||||||  ||||| |||| || ||||||||| |||||||   ||||||| ||||||||||| ||||||    
T  33009717 taaaaatctaaagaaattgtccaatttataaggatttatataacaaattcatagggatttatataagaaattgtaaaaaa 33009796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 313
Target Start/End: Complemental strand, 1386190 - 1386155
Alignment:
Q  278 atttacataagaaattgcaaaaaagttgggtccgag 313  Q
    |||||||||||||||||||||||| |||||||||||    
T  1386190 atttacataagaaattgcaaaaaaattgggtccgag 1386155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 40780100 - 40780179
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggg-gtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    |||||| |||| |||||  | ||| ||||||| |||||||||||||||||||  | |||||||||||||||| |||||||    
T  40780100 aaaaatttaaaaaaattgtcaaatttatagggtgtttatataagaaattcagaggaatttacataagaaattacaaaaaa 40780179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 2888086 - 2888164
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||| |||||   |||| |||||| |||||||||| |||||||    ||||||||||||||||| |||||||    
T  2888086 aaaaatctaaaaaaattgttcaatttataggagtttatataaaaaattcatagagatttacataagaaattacaaaaaa 2888164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 3956624 - 3956688
Alignment:
Q  230 taaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattg 294  Q
    ||||||||||  ||||| || |||||||||||||| |||||||   |||||||||||| ||||||    
T  3956624 taaagaaattgtccaatttacaggggtttatataataaattcatagggatttacataaaaaattg 3956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 20914 - 20836
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||| |||||  ||||| ||||| | ||||||||||||||||||  | ||||||||||||||||||||||||    
T  20914 aaaaatctaaaaaaattgtccaatttatagagctttatataagaaattcagaggaatttacataagaaattgcaaaaaa 20836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 34535 - 34457
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaa 301  Q
    ||||||||||||||| |  ||||| ||||| | |||||||||  |||||||  ||||||||||||||||||||||||||    
T  34535 aaaaatctaaagaaactgtccaatttatagagatttatataaagaattcagagggatttacataagaaattgcaaaaaa 34457  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 54564 - 54647
Alignment:
Q  223 aaaaatctaaagaaattacccaatatataggggtttatataagaaattcagcaggatttacataagaaattgcaaaaaagttgg 306  Q
    |||||| ||||||||||  ||||| ||||||| ||||||||| |||||||   | ||||||| || ||||||||||||| ||||    
T  54564 aaaaatgtaaagaaattgtccaatttatagggatttatataaaaaattcataggaatttacacaaaaaattgcaaaaaaattgg 54647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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