View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11821_high_26 (Length: 294)

Name: NF11821_high_26
Description: NF11821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11821_high_26
NF11821_high_26
[»] chr7 (64 HSPs)
chr7 (1-240)||(5116542-5116781)
chr7 (68-218)||(3904675-3904826)
chr7 (49-218)||(47673983-47674152)
chr7 (49-200)||(26417294-26417444)
chr7 (49-218)||(27347776-27347945)
chr7 (49-218)||(48491538-48491707)
chr7 (49-157)||(23565101-23565209)
chr7 (52-192)||(36574558-36574697)
chr7 (48-238)||(4508745-4508933)
chr7 (52-218)||(30024775-30024941)
chr7 (49-218)||(4586120-4586289)
chr7 (49-238)||(6431912-6432099)
chr7 (49-218)||(8153301-8153470)
chr7 (49-163)||(18396332-18396446)
chr7 (49-218)||(31733009-31733178)
chr7 (57-157)||(43363519-43363621)
chr7 (49-218)||(47676176-47676345)
chr7 (49-173)||(8359356-8359481)
chr7 (49-157)||(22269994-22270101)
chr7 (49-218)||(26639280-26639453)
chr7 (143-238)||(1360286-1360381)
chr7 (49-218)||(14069873-14070042)
chr7 (49-218)||(14379901-14380070)
chr7 (49-218)||(31105433-31105602)
chr7 (49-200)||(23555017-23555168)
chr7 (4-156)||(22328385-22328538)
chr7 (49-172)||(1113662-1113785)
chr7 (41-129)||(6359984-6360071)
chr7 (49-129)||(32358094-32358173)
chr7 (49-200)||(35853892-35854042)
chr7 (49-200)||(41317474-41317624)
chr7 (49-238)||(2361012-2361199)
chr7 (51-157)||(38671264-38671369)
chr7 (43-218)||(43864203-43864378)
chr7 (49-103)||(19502253-19502306)
chr7 (49-157)||(4253568-4253677)
chr7 (240-277)||(5116489-5116526)
chr7 (49-102)||(24525542-24525594)
chr7 (60-157)||(29608758-29608854)
chr7 (49-157)||(34310756-34310863)
chr7 (49-157)||(496023-496130)
chr7 (49-157)||(2390303-2390410)
chr7 (49-157)||(3259016-3259123)
chr7 (49-157)||(25615874-25615981)
chr7 (49-218)||(36146448-36146617)
chr7 (49-157)||(41649051-41649157)
chr7 (49-157)||(48489452-48489559)
chr7 (49-157)||(48599374-48599481)
chr7 (49-200)||(29991032-29991181)
chr7 (44-102)||(31518978-31519035)
chr7 (49-103)||(43504194-43504248)
chr7 (49-157)||(4510588-4510695)
chr7 (49-157)||(4512430-4512537)
chr7 (61-157)||(18126665-18126760)
chr7 (43-98)||(2759231-2759285)
chr7 (60-103)||(5513717-5513760)
chr7 (94-157)||(13065482-13065545)
chr7 (49-103)||(25767000-25767053)
chr7 (49-103)||(39731443-39731497)
chr7 (67-105)||(40808661-40808699)
chr7 (49-103)||(48408878-48408932)
chr7 (67-132)||(27073862-27073927)
chr7 (67-132)||(27204386-27204451)
chr7 (64-119)||(4178833-4178886)
[»] chr5 (53 HSPs)
chr5 (67-238)||(35616109-35616280)
chr5 (49-205)||(316735-316891)
chr5 (60-222)||(10054867-10055028)
chr5 (67-205)||(30802802-30802939)
chr5 (4-218)||(3325873-3326087)
chr5 (49-200)||(25412739-25412888)
chr5 (49-238)||(28278257-28278444)
chr5 (57-120)||(30793194-30793257)
chr5 (49-238)||(213406-213593)
chr5 (49-218)||(42426275-42426444)
chr5 (49-172)||(3075698-3075821)
chr5 (49-157)||(13488224-13488331)
chr5 (57-172)||(13695738-13695854)
chr5 (49-157)||(16452101-16452208)
chr5 (49-157)||(33831701-33831808)
chr5 (49-218)||(533728-533897)
chr5 (49-218)||(8565986-8566155)
chr5 (49-238)||(40147202-40147389)
chr5 (49-218)||(42428470-42428639)
chr5 (48-238)||(33906069-33906256)
chr5 (49-172)||(27637653-27637776)
chr5 (49-220)||(28750695-28750866)
chr5 (57-129)||(9049390-9049461)
chr5 (49-129)||(13239800-13239879)
chr5 (49-157)||(38747026-38747133)
chr5 (49-157)||(39468589-39468696)
chr5 (9-233)||(10700650-10700872)
chr5 (49-103)||(37439216-37439269)
chr5 (49-102)||(5058121-5058173)
chr5 (49-129)||(538074-538153)
chr5 (57-157)||(31182993-31183091)
chr5 (49-119)||(13343120-13343188)
chr5 (49-119)||(32636883-32636952)
chr5 (49-129)||(30682962-30683043)
chr5 (67-152)||(32609561-32609646)
chr5 (67-103)||(5007806-5007842)
chr5 (67-103)||(32583340-32583376)
chr5 (38-102)||(42926967-42927030)
chr5 (49-132)||(8445761-8445844)
chr5 (49-172)||(16409480-16409603)
chr5 (49-164)||(26177895-26178010)
chr5 (49-103)||(36074083-36074135)
chr5 (38-129)||(42309964-42310054)
chr5 (49-103)||(9789264-9789318)
chr5 (57-119)||(16137074-16137136)
chr5 (49-103)||(18441688-18441742)
chr5 (49-119)||(30182647-30182716)
chr5 (59-101)||(31992247-31992289)
chr5 (59-163)||(22097879-22097981)
chr5 (49-102)||(27015599-27015651)
chr5 (240-277)||(33906306-33906343)
chr5 (138-218)||(4160591-4160671)
chr5 (60-92)||(40293569-40293601)
[»] chr4 (76 HSPs)
chr4 (73-236)||(32091420-32091583)
chr4 (49-200)||(33089856-33090007)
chr4 (57-220)||(34112773-34112938)
chr4 (57-218)||(38811237-38811397)
chr4 (6-205)||(21703833-21704032)
chr4 (18-157)||(12073413-12073551)
chr4 (49-218)||(26175676-26175845)
chr4 (6-236)||(26699439-26699671)
chr4 (50-200)||(22882791-22882941)
chr4 (50-200)||(22934455-22934605)
chr4 (6-155)||(33989867-33990016)
chr4 (49-157)||(8665429-8665536)
chr4 (49-238)||(12119478-12119668)
chr4 (49-218)||(31474109-31474279)
chr4 (49-200)||(56178677-56178827)
chr4 (67-202)||(41961393-41961528)
chr4 (57-218)||(54199954-54200115)
chr4 (49-218)||(6542219-6542390)
chr4 (49-172)||(379385-379508)
chr4 (49-157)||(27417005-27417112)
chr4 (49-218)||(5429638-5429807)
chr4 (50-218)||(6677428-6677597)
chr4 (49-218)||(36994483-36994652)
chr4 (49-218)||(47038451-47038618)
chr4 (49-157)||(2209734-2209842)
chr4 (43-218)||(12745470-12745645)
chr4 (49-220)||(34570454-34570625)
chr4 (49-157)||(41964436-41964544)
chr4 (71-184)||(44570427-44570539)
chr4 (49-172)||(46703505-46703629)
chr4 (49-218)||(48143001-48143171)
chr4 (58-155)||(6199921-6200020)
chr4 (49-157)||(9927498-9927605)
chr4 (49-157)||(40632466-40632573)
chr4 (49-172)||(50673887-50674009)
chr4 (49-238)||(54882961-54883148)
chr4 (49-217)||(3913408-3913576)
chr4 (51-157)||(24969133-24969238)
chr4 (49-163)||(37740640-37740753)
chr4 (49-157)||(4587979-4588087)
chr4 (76-200)||(53345195-53345319)
chr4 (43-119)||(12744081-12744156)
chr4 (57-157)||(35662462-35662561)
chr4 (49-156)||(8648161-8648267)
chr4 (52-172)||(21688253-21688374)
chr4 (49-119)||(12743965-12744034)
chr4 (49-119)||(12745354-12745423)
chr4 (49-218)||(48893678-48893851)
chr4 (49-102)||(6656032-6656084)
chr4 (49-157)||(26364257-26364364)
chr4 (59-200)||(35369495-35369631)
chr4 (49-218)||(36463429-36463598)
chr4 (49-120)||(51337122-51337192)
chr4 (49-218)||(52095402-52095571)
chr4 (38-163)||(5207871-5207996)
chr4 (49-119)||(5370123-5370192)
chr4 (49-218)||(44967869-44968038)
chr4 (38-130)||(37754989-37755081)
chr4 (49-157)||(41639447-41639554)
chr4 (49-157)||(46147431-46147538)
chr4 (49-157)||(52467394-52467501)
chr4 (43-102)||(29254570-29254628)
chr4 (49-172)||(29999846-29999969)
chr4 (51-154)||(50262743-50262845)
chr4 (59-101)||(8832254-8832296)
chr4 (49-119)||(12739590-12739659)
chr4 (49-119)||(12747796-12747865)
chr4 (49-95)||(35370096-35370142)
chr4 (49-103)||(37229761-37229814)
chr4 (57-103)||(52065672-52065718)
chr4 (57-102)||(5349986-5350031)
chr4 (57-102)||(13009492-13009536)
chr4 (57-102)||(45687230-45687274)
chr4 (72-156)||(48142440-48142525)
chr4 (65-101)||(19222384-19222420)
chr4 (138-238)||(43135513-43135613)
[»] chr6 (32 HSPs)
chr6 (49-238)||(25073508-25073697)
chr6 (57-200)||(4045401-4045544)
chr6 (49-218)||(9183071-9183240)
chr6 (17-172)||(5043632-5043787)
chr6 (49-157)||(3808748-3808856)
chr6 (49-157)||(2972979-2973086)
chr6 (49-238)||(21593605-21593792)
chr6 (49-157)||(21588952-21589059)
chr6 (49-200)||(5406240-5406389)
chr6 (49-200)||(5410565-5410714)
chr6 (49-200)||(5413434-5413583)
chr6 (50-157)||(17758044-17758150)
chr6 (49-157)||(26830163-26830270)
chr6 (49-218)||(28137448-28137617)
chr6 (49-172)||(31404715-31404837)
chr6 (49-103)||(5409109-5409162)
chr6 (49-172)||(17762995-17763118)
chr6 (49-153)||(26954326-26954429)
chr6 (49-103)||(3072799-3072853)
chr6 (67-129)||(5740055-5740117)
chr6 (49-119)||(30834576-30834645)
chr6 (49-103)||(33160392-33160445)
chr6 (49-102)||(2171572-2171624)
chr6 (49-129)||(603128-603207)
chr6 (49-157)||(3038943-3039050)
chr6 (61-164)||(12221155-12221258)
chr6 (49-157)||(22424866-22424974)
chr6 (49-104)||(26800662-26800715)
chr6 (50-103)||(2908533-2908586)
chr6 (49-86)||(16569113-16569150)
chr6 (49-102)||(33211225-33211277)
chr6 (49-101)||(9572667-9572719)
[»] chr2 (44 HSPs)
chr2 (4-201)||(30218039-30218236)
chr2 (44-206)||(42261520-42261685)
chr2 (17-148)||(24398087-24398218)
chr2 (6-200)||(33648148-33648343)
chr2 (49-218)||(36318049-36318218)
chr2 (49-200)||(5723296-5723445)
chr2 (49-200)||(36988116-36988266)
chr2 (38-210)||(42019899-42020073)
chr2 (49-200)||(38312218-38312368)
chr2 (6-172)||(7815272-7815436)
chr2 (49-218)||(17057409-17057578)
chr2 (49-218)||(17085392-17085561)
chr2 (49-157)||(723784-723891)
chr2 (49-218)||(13121728-13121895)
chr2 (57-172)||(26353189-26353304)
chr2 (49-157)||(45726950-45727057)
chr2 (57-218)||(42362311-42362472)
chr2 (49-157)||(1631772-1631879)
chr2 (49-200)||(2334458-2334608)
chr2 (49-157)||(6595046-6595153)
chr2 (49-157)||(33162490-33162597)
chr2 (57-157)||(35446932-35447031)
chr2 (49-218)||(29867828-29867997)
chr2 (49-218)||(34139810-34139980)
chr2 (49-218)||(36773521-36773690)
chr2 (49-166)||(4484370-4484487)
chr2 (49-166)||(30833357-30833474)
chr2 (73-200)||(7597074-7597202)
chr2 (57-157)||(41446160-41446260)
chr2 (49-157)||(42288150-42288257)
chr2 (49-200)||(4503173-4503323)
chr2 (57-218)||(11151639-11151800)
chr2 (57-218)||(11690460-11690621)
chr2 (141-206)||(42261749-42261817)
chr2 (49-205)||(28671902-28672059)
chr2 (49-157)||(14633865-14633973)
chr2 (49-129)||(17490188-17490267)
chr2 (57-157)||(41454255-41454355)
chr2 (49-164)||(32289577-32289692)
chr2 (49-103)||(45099830-45099882)
chr2 (154-200)||(5868428-5868474)
chr2 (67-129)||(34811279-34811341)
chr2 (67-156)||(4561110-4561199)
chr2 (49-102)||(7451194-7451246)
[»] chr3 (64 HSPs)
chr3 (60-238)||(26323124-26323303)
chr3 (49-200)||(40735361-40735511)
chr3 (69-231)||(35138765-35138928)
chr3 (49-218)||(44700518-44700687)
chr3 (67-218)||(8166514-8166667)
chr3 (49-202)||(33191807-33191959)
chr3 (51-218)||(46860432-46860600)
chr3 (49-238)||(54593645-54593832)
chr3 (67-205)||(2020121-2020250)
chr3 (49-172)||(7762270-7762393)
chr3 (49-157)||(30236146-30236253)
chr3 (49-218)||(40734457-40734626)
chr3 (57-156)||(25491015-25491114)
chr3 (49-200)||(45095142-45095291)
chr3 (57-218)||(1313852-1314014)
chr3 (49-157)||(49199509-49199617)
chr3 (49-172)||(6095639-6095762)
chr3 (49-157)||(22835042-22835149)
chr3 (49-157)||(34491233-34491340)
chr3 (49-157)||(46173378-46173485)
chr3 (49-164)||(7764478-7764592)
chr3 (72-238)||(20937596-20937762)
chr3 (49-218)||(29682318-29682487)
chr3 (49-218)||(44331504-44331673)
chr3 (31-204)||(1683450-1683620)
chr3 (49-218)||(9581242-9581410)
chr3 (49-119)||(19683929-19683998)
chr3 (51-218)||(5236498-5236665)
chr3 (49-166)||(9636166-9636282)
chr3 (49-172)||(32891108-32891232)
chr3 (49-157)||(43401841-43401949)
chr3 (60-172)||(54739004-54739116)
chr3 (49-157)||(760868-760975)
chr3 (49-218)||(29196426-29196596)
chr3 (49-129)||(29810917-29810996)
chr3 (57-218)||(31314404-31314565)
chr3 (49-119)||(23197979-23198048)
chr3 (49-119)||(23200178-23200247)
chr3 (49-159)||(23391949-23392058)
chr3 (67-157)||(24635278-24635368)
chr3 (49-119)||(37408517-37408586)
chr3 (49-236)||(43403784-43403970)
chr3 (49-102)||(4570028-4570080)
chr3 (49-157)||(29813084-29813191)
chr3 (70-130)||(40519258-40519317)
chr3 (49-172)||(47304256-47304379)
chr3 (18-102)||(55301981-55302064)
chr3 (57-200)||(3148038-3148181)
chr3 (48-119)||(5258183-5258253)
chr3 (48-119)||(5260362-5260432)
chr3 (58-163)||(5373247-5373353)
chr3 (49-154)||(36018876-36018980)
chr3 (57-189)||(4055811-4055943)
chr3 (49-98)||(16499109-16499157)
chr3 (49-102)||(40913369-40913421)
chr3 (57-102)||(51398890-51398934)
chr3 (49-157)||(53921543-53921650)
chr3 (49-172)||(7780044-7780166)
chr3 (72-238)||(39127486-39127653)
chr3 (59-103)||(801166-801210)
chr3 (240-272)||(5434154-5434186)
chr3 (49-105)||(41819563-41819617)
chr3 (89-204)||(50432733-50432849)
chr3 (64-119)||(54744304-54744357)
[»] chr8 (57 HSPs)
chr8 (49-205)||(32902213-32902369)
chr8 (6-199)||(7597592-7597786)
chr8 (49-205)||(11712040-11712197)
chr8 (73-218)||(3231859-3232005)
chr8 (49-157)||(40328800-40328908)
chr8 (49-218)||(8965731-8965900)
chr8 (49-157)||(30143361-30143468)
chr8 (49-157)||(40221766-40221873)
chr8 (57-218)||(4731617-4731778)
chr8 (49-218)||(18141780-18141948)
chr8 (49-218)||(27811237-27811406)
chr8 (49-200)||(34254371-34254520)
chr8 (49-218)||(43036382-43036551)
chr8 (38-211)||(19491728-19491900)
chr8 (3-211)||(29796314-29796524)
chr8 (49-200)||(42498171-42498322)
chr8 (69-192)||(10240139-10240263)
chr8 (67-211)||(41266935-41267080)
chr8 (49-172)||(1292503-1292626)
chr8 (49-200)||(3303710-3303860)
chr8 (49-172)||(18655405-18655528)
chr8 (49-200)||(33352128-33352278)
chr8 (49-157)||(42435031-42435138)
chr8 (50-157)||(4283545-4283651)
chr8 (49-218)||(15212745-15212914)
chr8 (49-200)||(34256547-34256696)
chr8 (49-163)||(12702674-12702787)
chr8 (70-205)||(40585686-40585822)
chr8 (49-156)||(1822313-1822421)
chr8 (49-156)||(1856758-1856866)
chr8 (49-200)||(40321058-40321208)
chr8 (49-238)||(44353733-44353921)
chr8 (49-119)||(5689330-5689399)
chr8 (122-200)||(7444930-7445008)
chr8 (49-200)||(30291584-30291735)
chr8 (49-157)||(1345411-1345518)
chr8 (49-172)||(41366654-41366777)
chr8 (49-119)||(1746259-1746327)
chr8 (49-119)||(17982712-17982781)
chr8 (49-119)||(44303914-44303983)
chr8 (60-157)||(11384006-11384102)
chr8 (67-238)||(33655361-33655532)
chr8 (49-157)||(4162518-4162624)
chr8 (59-119)||(9765804-9765863)
chr8 (57-157)||(30909389-30909487)
chr8 (48-103)||(8153833-8153887)
chr8 (49-84)||(10015173-10015208)
chr8 (49-156)||(10930239-10930345)
chr8 (49-119)||(19945399-19945469)
chr8 (49-103)||(3073913-3073966)
chr8 (51-101)||(10929865-10929914)
chr8 (60-129)||(11137074-11137146)
chr8 (49-119)||(31218316-31218385)
chr8 (49-86)||(4743254-4743291)
chr8 (49-157)||(6598993-6599100)
chr8 (49-157)||(6674446-6674553)
chr8 (65-101)||(40873729-40873765)
[»] scaffold0219 (1 HSPs)
scaffold0219 (24-218)||(27457-27652)
[»] scaffold0002 (3 HSPs)
scaffold0002 (44-206)||(490355-490520)
scaffold0002 (49-119)||(434592-434661)
scaffold0002 (141-206)||(490584-490652)
[»] scaffold0053 (1 HSPs)
scaffold0053 (57-218)||(25012-25174)
[»] chr1 (72 HSPs)
chr1 (57-187)||(22079307-22079437)
chr1 (48-201)||(9109458-9109611)
chr1 (49-219)||(49918308-49918478)
chr1 (49-200)||(3156843-3156993)
chr1 (18-205)||(12318533-12318718)
chr1 (17-238)||(37033080-37033300)
chr1 (67-238)||(41135760-41135931)
chr1 (49-172)||(19754499-19754623)
chr1 (57-218)||(4535528-4535688)
chr1 (49-157)||(7482270-7482378)
chr1 (49-200)||(4552677-4552827)
chr1 (41-157)||(19752707-19752822)
chr1 (48-218)||(44650201-44650372)
chr1 (49-157)||(47255380-47255487)
chr1 (48-151)||(6808479-6808582)
chr1 (49-218)||(8550827-8550996)
chr1 (49-218)||(28265594-28265763)
chr1 (38-211)||(41360881-41361053)
chr1 (48-172)||(193616-193740)
chr1 (49-220)||(28220266-28220437)
chr1 (49-157)||(37168318-37168426)
chr1 (48-163)||(3460710-3460826)
chr1 (49-157)||(11348719-11348826)
chr1 (49-157)||(13547129-13547236)
chr1 (49-129)||(37282731-37282811)
chr1 (67-189)||(16914232-16914355)
chr1 (49-218)||(31659197-31659366)
chr1 (49-218)||(44455119-44455288)
chr1 (49-218)||(50167215-50167384)
chr1 (67-205)||(1050501-1050639)
chr1 (39-129)||(16455670-16455759)
chr1 (49-200)||(20762649-20762800)
chr1 (43-218)||(3847155-3847330)
chr1 (49-153)||(15820332-15820435)
chr1 (67-200)||(25652064-25652197)
chr1 (49-218)||(37503597-37503763)
chr1 (49-157)||(47115192-47115300)
chr1 (49-157)||(13549040-13549147)
chr1 (49-129)||(28223461-28223540)
chr1 (49-129)||(30476486-30476565)
chr1 (49-129)||(31925747-31925826)
chr1 (49-218)||(37559908-37560078)
chr1 (49-218)||(1833481-1833650)
chr1 (49-128)||(5459956-5460034)
chr1 (51-129)||(2263016-2263094)
chr1 (57-189)||(13938126-13938258)
chr1 (49-157)||(23555305-23555412)
chr1 (49-157)||(29136268-29136375)
chr1 (49-157)||(42298015-42298122)
chr1 (57-218)||(196956-197117)
chr1 (57-156)||(834215-834313)
chr1 (48-119)||(2926567-2926638)
chr1 (49-156)||(13659376-13659482)
chr1 (49-103)||(3189405-3189458)
chr1 (49-103)||(3198222-3198275)
chr1 (49-103)||(3207061-3207114)
chr1 (49-218)||(10925182-10925354)
chr1 (49-119)||(13316392-13316461)
chr1 (49-157)||(34603597-34603705)
chr1 (57-102)||(45644402-45644446)
chr1 (49-153)||(46064943-46065046)
chr1 (58-156)||(928025-928123)
chr1 (49-218)||(13138016-13138183)
chr1 (61-99)||(31065713-31065751)
chr1 (59-153)||(32471486-32471579)
chr1 (49-103)||(51765471-51765525)
chr1 (144-193)||(6398631-6398680)
chr1 (49-102)||(37876806-37876858)
chr1 (49-102)||(50169250-50169302)
chr1 (59-99)||(6398724-6398764)
chr1 (49-101)||(28242382-28242432)
chr1 (237-277)||(42298249-42298289)
[»] scaffold0236 (1 HSPs)
scaffold0236 (49-119)||(10548-10617)
[»] scaffold0466 (1 HSPs)
scaffold0466 (49-157)||(7348-7455)
[»] scaffold0016 (1 HSPs)
scaffold0016 (49-103)||(114677-114730)
[»] scaffold0176 (1 HSPs)
scaffold0176 (49-157)||(18044-18150)
[»] scaffold0066 (1 HSPs)
scaffold0066 (49-172)||(20455-20578)
[»] scaffold0006 (1 HSPs)
scaffold0006 (49-156)||(149137-149243)
[»] scaffold0491 (2 HSPs)
scaffold0491 (49-166)||(11201-11318)
scaffold0491 (49-119)||(8775-8845)
[»] scaffold0286 (1 HSPs)
scaffold0286 (49-102)||(11633-11685)
[»] scaffold1519 (1 HSPs)
scaffold1519 (49-119)||(975-1043)
[»] scaffold0014 (1 HSPs)
scaffold0014 (64-157)||(80338-80430)


Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5116781 - 5116542
Alignment:
Q  1 atcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagataca 100  Q
    ||||||||||||||| |  |||||||||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5116781 atcaaaaatatttaccctattcagtccaacaatgatttgctatgggggagagatttatctctccaattcactatcaatgagttctttacaaagagataca 5116682  T
Q  101 aaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||| |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5116681 aaaggtttacaataaattatcttcaacaaactatccaagaacaaacctaatttctactcttttcctaatctcctcccataaacaagagactcaatgattt 5116582  T
Q  201 cactcgcccaatgtgttttccatttgtttcccaactctta 240  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  5116581 cacccgcccaatgtgttttccatttgtttcccaactctta 5116542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 3904675 - 3904826
Alignment:
Q  68 tcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctc 166  Q
    |||||||||||||||||||||||||||||| |||||   |||||| ||||||  ||||| |  || ||| |||||||| ||||||||||||  ||||| |    
T  3904675 tcactatcaatgagttctttacaaagagatgcaaaagtgttacaagaaattacattcaataggctctcaaagaacaaaacctaatttctaccattttccc 3904774  T
Q  167 aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    |||||| ||| |  ||||||||||||||||||||||||||||||| ||||||    
T  3904775 aatctcttcctaagaacaagagactcaatgatttcactcgcccaaggtgttt 3904826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 47673983 - 47674152
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  47673983 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 47674081  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  47674082 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 47674152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 26417444 - 26417294
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||| |||||||| ||  || ||||||| |||    
T  26417444 agagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaaccct 26417346  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  26417345 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattt 26417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 27347945 - 27347776
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  27347945 agagattgatctctgcaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaatcct 27347847  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  27347846 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 27347776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 48491707 - 48491538
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  48491707 agagattgatctctccaatccactatcaatgagttcttt-caaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 48491609  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  48491608 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaagtgttt 48491538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 23565101 - 23565209
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaa-acc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| |||||| ||||||||| ||  || ||||||| |||    
T  23565101 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacc 23565199  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  23565200 taatttctac 23565209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 36574558 - 36574697
Alignment:
Q  52 gatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaa 150  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||| |||| | |||||| ||||||  |||||||||||  || |||||||| | |||    
T  36574558 gattgatctctccaaaccactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaa 36574657  T
Q  151 tttctactcttttctcaatctcctcccataaacaagagactc 192  Q
    ||||||| |||| | |||||| |||| |||||||||| ||||    
T  36574658 tttctac-ctttccccaatct-ctccaataaacaagacactc 36574697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 4508745 - 4508933
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||  | |||||| ||||||  ||||| || ||  || ||||||| ||    
T  4508745 aagagattgatctctccaatccactctcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaacaaccc 4508843  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||||||||| ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||||    
T  4508844 taatttctactcattttcccaatct-caccaatcaacaagacactc-atgattttcactctcccaaggtg-tttacaattgtttcccaactct 4508933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 30024775 - 30024941
Alignment:
Q  52 gatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaat 151  Q
    |||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||| ||||||    
T  30024775 gattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaat 30024873  T
Q  152 ttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  30024874 ttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 30024941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 4586289 - 4586120
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  4586289 agagattgatctctccaatccactatcaatgagttc-ttacaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaaccct 4586191  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt-cactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||||||||||| ||||| ||||| ||||||    
T  4586190 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgatttacactcacccaaggtgttt 4586120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 6432099 - 6431912
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  6432099 agagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaatcct 6432001  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| ||||||   || || ||||||| |||| |||| |||||||| ||||||||| ||| || |||||||||||||||    
T  6432000 aatttctacccattttcccaatct-aaccaatgaacaagacactc-atgattttcactctcccaatgtg-tttacaattgtttcccaactct 6431912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 8153470 - 8153301
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||  |||||||||||||||||    |||||| ||||||  ||  |||| ||  || ||||||| |||    
T  8153470 agagattgatctctccaatccactatcaatgagtt-attacaaagagatacaaatgagttacaagaaattagctttgacaatctcacaaagaacaaccct 8153372  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||||| ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  8153371 aatttctactcattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 8153301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 18396446 - 18396332
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 147  Q
    ||||||| ||||||||||| | |||||||||| ||||||| |||||||||||||||| |||||| ||| ||  ||||||||||| ||  ||||| |||||    
T  18396446 agagattgatctctccaatcctctatcaatgaattctttataaagagatacaaaatg-ttacaaaaaaataggttcaacaaactctccaagaacaaaacc 18396348  T
Q  148 taatttctactctttt 163  Q
    ||||||||||| ||||    
T  18396347 taatttctactttttt 18396332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 31733009 - 31733178
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  | |||||| ||||||  |||| ||| ||  || ||||||| |||    
T  31733009 agagattgatctctccaatccagtatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaaccct 31733107  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||||| ||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31733108 aatttctacccattttctcagtct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 31733178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 43363519 - 43363621
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaa--gagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttc 154  Q
    |||| |||| ||||||||||||||||| ||||||||  |||||||||||   ||||||||||||| ||||||||| || ||  |||||||||||||||||    
T  43363519 atctatccacttcactatcaatgagttatttacaaatagagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaatttc 43363618  T
Q  155 tac 157  Q
    |||    
T  43363619 tac 43363621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 47676176 - 47676345
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||| | |||||||| ||||||||| |||||||||||||||  | |||||| ||||||  ||||||||| |  || ||||||| |||    
T  47676176 agagattgatctctccattccactatcattgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccct 47676274  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||| ||| |||||||| ||||| ||||||    
T  47676275 aatttctacccattttctcaatct-caccaatgaacaagacactcattgattttcactcacccaaggtgttt 47676345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 173
Target Start/End: Original strand, 8359356 - 8359481
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| |||||| ||| ||||| ||  || |||| || ||    
T  8359356 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagtttaaacaagctcacaaagaaaaaccc 8359454  T
Q  148 taatttctactc-ttttctcaatctcc 173  Q
    |||||||||| | ||||| ||||||||    
T  8359455 taatttctacccattttcccaatctcc 8359481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 22270101 - 22269994
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  22270101 agagattgatctctccaatccactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 22270003  T
Q  149 aatttctac 157  Q
    |||||||||    
T  22270002 aatttctac 22269994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 26639453 - 26639280
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagata----caaaatgtttacaataaattattttcaacaaactatcatagaacaa 144  Q
    ||||||| ||||||| ||| || |||||| ||||| ||||||| || |||    ||||| | |||||| ||||||   |||||||||| ||  ||||||     
T  26639453 agagattgatctctctaatccattatcaaagagttatttacaatgatatatatacaaaagggttacaagaaattaacatcaacaaactctccaagaacat 26639354  T
Q  145 acctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    |||||||||||||  ||||| ||||||| ||||| ||| ||||||||||||||||| |||| || || ||||||    
T  26639353 acctaatttctaccattttcacaatctcttcccaaaaagaagagactcaatgattttactcacctaaagtgttt 26639280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 1360286 - 1360381
Alignment:
Q  143 aaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||||||||||||  ||||| ||||||| | |||| ||||||||||||||||||||||||| || || |||||| ||| ||||||  |||||||    
T  1360286 aaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactct 1360381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 14069873 - 14070042
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  14069873 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 14069971  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  14069972 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 14070042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 14379901 - 14380070
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  14379901 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 14379999  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  14380000 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 14380070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 31105433 - 31105602
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||  | |||||| ||||||  |||||||| ||  || |||| ||| ||    
T  31105433 agagatttatctctccaatccaccatcaatgagttc-ttacaaaaagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaatct 31105531  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31105532 aatttctacccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 31105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 23555168 - 23555017
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||   |||||| ||||||  ||||||||  |  || ||||||| |||    
T  23555168 agagattgatctctccaatccactatcaatgagttc-ttacaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaaccct 23555070  T
Q  149 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  | ||||| |||||| | || || ||||||| ||||||||||||    
T  23555069 aatttctaccattttttcccaatct-caccaatgaacaagacactcaatgattt 23555017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 22328385 - 22328538
Alignment:
Q  4 aaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||||||||| |||||| |||||| |||||  |||| | ||  ||||||| ||||||| ||| |||||| ||||| ||| || |||||||||||||||    
T  22328385 aaaaatatttacccagttcggtccaacaatgacctactctaggggagagattgatctctcaaatccactattaatgacttccttgcaaagagatacaaaa 22328484  T
Q  104 tgtttacaataaattattttcaacaaactatcatagaacaaac-ctaatttcta 156  Q
       |||||| ||||||  |||||||| ||  || ||||||||| ||||||||||    
T  22328485 gagttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttcta 22328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 1113785 - 1113662
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||||||||||  ||||||||||||||| |||||||||||||||||  | ||| || ||||||  |||||||| ||  || ||||||| |||    
T  1113785 agagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaaccct 1113687  T
Q  149 aatttcta-ctcttttctcaatctc 172  Q
    |||||||| |  |||||||||||||    
T  1113686 aatttctatccattttctcaatctc 1113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 6359984 - 6360071
Alignment:
Q  41 tatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    |||||| |||||||| |||||||||||  ||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  6359984 tatggggaagagattgatctctccaatcaactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 6360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 32358094 - 32358173
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  32358094 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 32358173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 35854042 - 35853892
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  35854042 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 35853944  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  35853943 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattt 35853892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 41317474 - 41317624
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||| ||||||||  | |||||| ||||||  ||  |||| ||  || ||||||| |||    
T  41317474 agagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatggattacaagaaattagctttgacaagctcacaaagaacaaccct 41317572  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||   ||||| |||||||  || || ||||||||||||||||||||    
T  41317573 aatttctaccaattttcccaatctca-ccaatgaacaagagactcaatgattt 41317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 238
Target Start/End: Original strand, 2361012 - 2361199
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || |||| ||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  2361012 agagattgatatctcaaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 2361110  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||||    
T  2361111 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaaggtg-tttacaattgtttcccaactct 2361199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 38671264 - 38671369
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaaccta 149  Q
    |||||||||||| |||| |||||||||||||||| |||||||| ||||| |||||| |||||||||||||  || ||||| ||  || ||||||| ||||    
T  38671264 agatttatctcttcaatccactatcaatgagttc-ttacaaagtgatac-aaatgtgttacaataaattagcttaaacaagctcacaaagaacaacccta 38671361  T
Q  150 atttctac 157  Q
    ||||||||    
T  38671362 atttctac 38671369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 43864378 - 43864203
Alignment:
Q  43 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac 142  Q
    ||||| ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||  | |||||  ||||||  ||||||||  |  || |||||    
T  43864378 tgggagagagattgatctctccaatccactatcaattagtt-tttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaac 43864280  T
Q  143 aaacctaatttcta--ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    || |||||||||||  | |||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  43864279 aaccctaatttctacccacttttc-caatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 43864203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 19502306 - 19502253
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  19502306 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 19502253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 4253568 - 4253677
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    ||||||| ||||||| ||| || |||||||||||||||| |||||||||| |||| | |||||  ||||||  |||||||| ||  || |||||||| ||    
T  4253568 agagattgatctctctaatccattatcaatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccc 4253667  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  4253668 taatttctac 4253677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 5116526 - 5116489
Alignment:
Q  240 aggatcttctcttttggttacccaagactcacctaagt 277  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5116526 aggatcttctcttttggttacccaagactcacctaagt 5116489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 24525542 - 24525594
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  24525542 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 24525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 29608854 - 29608758
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    |||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| ||||||||||||    
T  29608854 tctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctac 29608758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 34310756 - 34310863
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||| |||||| |||||| ||||||  ||||||||  |  || ||||||| ||    
T  34310756 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatac-aaatgtgttacaagaaattagcttcaacaatttcacaaagaacaaccc 34310853  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  34310854 taatttctac 34310863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 496023 - 496130
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||  | || ||| ||||||  |||||||| ||  || ||||| | |||    
T  496023 agagattgatctctccaatccactatcaatgagttc-ttataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaactaccct 496121  T
Q  149 aatttctac 157  Q
    |||||||||    
T  496122 aatttctac 496130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 2390410 - 2390303
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||  ||||||| || |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  2390410 agagattgatctctccaatccactatatatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 2390312  T
Q  149 aatttctac 157  Q
    |||||||||    
T  2390311 aatttctac 2390303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 3259123 - 3259016
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||    |||||||||||||  || ||||| ||  || ||||||| |||    
T  3259123 agagattgatctctccaatccactatcaatgggtt-tttacaaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaacaaccct 3259025  T
Q  149 aatttctac 157  Q
    | |||||||    
T  3259024 agtttctac 3259016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 25615981 - 25615874
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||  ||||||||  | |||||| ||||||  || ||||| |   ||||||||||||||    
T  25615981 agagattgatctctctaatccactatcaatgagttc-ttacaaaatgatacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacct 25615883  T
Q  149 aatttctac 157  Q
    |||||||||    
T  25615882 aatttctac 25615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 36146448 - 36146617
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac-c 147  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||| | ||||||  |||||||| ||  || | ||||||| |    
T  36146448 agagattgatctctcaaatccactatcaatgagttc-ttacaaagagatacaaatgggttac-agaaattagcttcaacaagctcacaaataacaaactc 36146545  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36146546 taatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36146617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 41649051 - 41649157
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||   | ||||| ||  || |||||||||||    
T  41649051 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaatta-gctaaacaagctcacaaagaacaaacct 41649148  T
Q  149 aatttctac 157  Q
    |||||||||    
T  41649149 aatttctac 41649157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 48489559 - 48489452
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||| |||||||| ||  ||||||||||||||  | |||||| ||||||  ||||||||  | ||| ||||||| |||    
T  48489559 agagattgatctctccaatccactatgaatgagttattg-caaagagatacaaatgggttacaagaaattagcttcaacaagttttcaaagaacaaccct 48489461  T
Q  149 aatttctac 157  Q
    |||||||||    
T  48489460 aatttctac 48489452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 48599374 - 48599481
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||| || || ||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  48599374 agagattgatctctccaatccactatcaatgagctc-ttccaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 48599472  T
Q  149 aatttctac 157  Q
    |||||||||    
T  48599473 aatttctac 48599481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 29991181 - 29991032
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||  ||| |||||||||||||| | |||||| ||||||  ||  ||||  |  || | ||||| |||    
T  29991181 agagattgatctctccaatccactatcaatgagtt-attagaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaaccct 29991083  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||  |||||| |||||| | || || ||||||| ||||||||||||    
T  29991082 aatttctatccttttcccaatct-caccaatgaacaagacactcaatgattt 29991032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 31519035 - 31518978
Alignment:
Q  44 gggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    |||| ||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  31519035 gggagagagattgatctctccaatccactgtcaatgagttc-ttacaaagagatacaaa 31518978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 43504194 - 43504248
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||||||||||||||||||||||   ||||||||||||||    
T  43504194 agagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaa 43504248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 4510588 - 4510695
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || ||| |||| |||||||||||||||| ||| |||||||||||||  | |||||| ||||||  ||||| |||||  || ||||||| | |    
T  4510588 agagattgatttcttcaatccactatcaatgagttc-ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaacctt 4510686  T
Q  149 aatttctac 157  Q
    |||||||||    
T  4510687 aatttctac 4510695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 4512430 - 4512537
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || ||| |||| |||||||||||||||| ||| |||||||||||||  | |||||| ||||||  ||||| |||||  || ||||||| | |    
T  4512430 agagattgatttcttcaatccactatcaatgagttc-ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaacctt 4512528  T
Q  149 aatttctac 157  Q
    |||||||||    
T  4512529 aatttctac 4512537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 18126760 - 18126665
Alignment:
Q  61 ctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    ||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  || |||||  |  || ||||||| ||||||||||||    
T  18126760 ctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaacaaccctaatttctac 18126665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 2759231 - 2759285
Alignment:
Q  43 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagata 98  Q
    |||| |||||||| || |||||||| |||||||||||||||| |||||||||||||    
T  2759231 tggggaagagattgatatctccaatccactatcaatgagttc-ttacaaagagata 2759285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 5513717 - 5513760
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||||||| | ||||||||||||||||||||||||| ||||    
T  5513717 tctccaattcagtgtcaatgagttctttacaaagagatataaaa 5513760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 13065482 - 13065545
Alignment:
Q  94 agatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    |||||||||| | ||||||||||||| |||||||||||| ||| ||  ||| ||||||||||||    
T  13065482 agatacaaaacggttacaataaattagtttcaacaaactctcaaagtgcaatcctaatttctac 13065545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 25767000 - 25767053
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| |||||||||||||||||| | ||||||||||||||    
T  25767000 agagattgaactctccaatccactatcaatgagttcttca-aaagagatacaaaa 25767053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 39731497 - 39731443
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  39731497 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 39731443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 40808699 - 40808661
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  40808699 ttcactatcaacgaattctttacaaagagatacaaaatg 40808661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 48408932 - 48408878
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||| |||  ||||||||||||||    
T  48408932 agagattaaactctccaatccactatcaatgagttatttcaaaagagatacaaaa 48408878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 27073927 - 27073862
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaact 132  Q
    |||||| |||| |||||||||||||||||||||||||   |||||| ||||||  ||||| |||||    
T  27073927 ttcactgtcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaataaact 27073862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 27204386 - 27204451
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaact 132  Q
    |||||| |||| |||||||||||||||||||||||||   |||||| ||||||  ||||| |||||    
T  27204386 ttcactgtcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaataaact 27204451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 4178886 - 4178833
Alignment:
Q  64 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    |||| ||||||||||||||||||  ||||||||||||||| | |||||| ||||||    
T  4178886 caatccactatcaatgagttctt--caaagagatacaaaagggttacaagaaatta 4178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 67 - 238
Target Start/End: Complemental strand, 35616280 - 35616109
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    |||||||||||||||||||||||||||| |||||||| | |||||| ||||||  || ||| | || ||  |||||||||||||||||||||| ||||||    
T  35616280 ttcactatcaatgagttctttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctactcatttctc 35616181  T
Q  167 aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||| |||| | ||||||||||||||||||||||||| ||||| |||||| | | |||||||| ||||||    
T  35616180 aatctcttcccgtgaacaagagactcaatgatttcactcacccaaggtgtttcctaattgtttccaaactct 35616109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 49 - 205
Target Start/End: Complemental strand, 316891 - 316735
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||| |||| || || |||||||||||||||||||||||||||||||| | |||||| ||||||  |||||||| || ||  |||||||||||    
T  316891 agagattgatccctccgatccattatcaatgagttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacct 316792  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 205  Q
    |||||||||  ||||||||||||  |||| |||||||||||| ||||||||||||||    
T  316791 aatttctacctttttctcaatcttttcccctaaacaagagacccaatgatttcactc 316735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 222
Target Start/End: Original strand, 10054867 - 10055028
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc 159  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||| | || ||||||  ||||||||||| |   ||||||||| |||||||||| |    
T  10054867 tctccaatacactatcaatgagttcattacaaagagatacaaaaggtt-ataagaaattagcttcaacaaactcttcaagaacaaacataatttctaccc 10054965  T
Q  160 ttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttcca 222  Q
     |||||||||||| | | || ||||| ||||||||||||||||| | |||||  |||||||||    
T  10054966 atttctcaatctctttctatgaacaatagactcaatgatttcacccacccaaaatgttttcca 10055028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 30802939 - 30802802
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    |||| |||||| |||||||||||||| |||||||||| | ||||||||||||| ||||||||| ||  || ||||||||||||| |||||| | ||| ||    
T  30802939 ttcattatcaacgagttctttacaaatagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaacctaa-ttctacccatttttc 30802841  T
Q  167 aatctcctcccataaacaagagactcaatgatttcactc 205  Q
    |||||| || ||| || |||||||| |||||||||||||    
T  30802840 aatctcttctcatgaataagagactaaatgatttcactc 30802802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 3326087 - 3325873
Alignment:
Q  4 aaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||||||||| |||||| |   || |||||  ||||||| || ||| ||| ||||||| ||| ||| |||| ||||||||||||||||||||||| ||    
T  3326087 aaaaatatttacccagttcggcgaaacaatgacctactatgtgagagatattgatctctctaatccaccatcattgagttctttacaaagagatacacaa 3325988  T
Q  104 tgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcac 203  Q
    || |||||| ||||||  |||||||| || |   |||||||| |||||||||||  |||| ||||| || ||| |  ||||||| || ||||| ||||||    
T  3325987 tggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacctttttttcaatttcttcctaagaacaagatacccaatggtttcac 3325888  T
Q  204 tcgcccaatgtgttt 218  Q
    || ||||| ||||||    
T  3325887 tcacccaaggtgttt 3325873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 25412888 - 25412739
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  25412888 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 25412790  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| |||||| |||||| | || || ||||||| ||||||||||||    
T  25412789 aatttctacccttttcccaatct-caccaatgaacaagacactcaatgattt 25412739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 28278444 - 28278257
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  28278444 agagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccat 28278346  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||||||| ||| || |||||||||||||||    
T  28278345 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaatgtg-tttacaattgtttcccaactct 28278257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 30793257 - 30793194
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattat 120  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  30793257 atctctccacttcactatcaattagttctttacaaagagatacaaaatggttacaataaattat 30793194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 213593 - 213406
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  213593 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaacaaccct 213495  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||||    
T  213494 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaaggtg-tttacaattgtttcccaactct 213406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 42426275 - 42426444
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | || ||| ||||||  ||||||||  |  || ||||||| |||    
T  42426275 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaaccct 42426373  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||| | |||||||| ||||| ||||||    
T  42426374 aatttctacccattttctcaatct-caccaatgaacaagacactcaataattttcactcacccaaggtgttt 42426444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 3075698 - 3075821
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||||||||||||| || ||| ||||||| |||||||||  | |||||| ||||||  |||| ||| ||  || |||||||||||    
T  3075698 agagattgatctctccaattcactatcaacgaattc-ttacaaaaagatacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaacct 3075796  T
Q  149 aatttcta-ctcttttctcaatctc 172  Q
    |||||||| || |||||||||||||    
T  3075797 aatttctacctattttctcaatctc 3075821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 13488331 - 13488224
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  13488331 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 13488233  T
Q  149 aatttctac 157  Q
    |||||||||    
T  13488232 aatttctac 13488224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 13695738 - 13695854
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttct 155  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||| | |||||| ||||||  || ||||| ||  || |||||||| |||||||| |    
T  13695738 atctctctaatccactattaatgagttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgt 13695837  T
Q  156 actcttttctcaatctc 172  Q
    || |||||| |||||||    
T  13695838 acccttttcccaatctc 13695854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 16452208 - 16452101
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||   | ||||||||| |    
T  16452208 agagatttatctctccaatccactatgaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaactt 16452110  T
Q  149 aatttctac 157  Q
    |||||||||    
T  16452109 aatttctac 16452101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 33831808 - 33831701
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||||| |||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  33831808 agagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 33831710  T
Q  149 aatttctac 157  Q
    |||||||||    
T  33831709 aatttctac 33831701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 533897 - 533728
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||| |||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||| ||| |||    
T  533897 agagattgatctttccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaaccct 533799  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| || |||||| |||||||| ||||| ||||||    
T  533798 aatttctacccattttcccaatct-caccaatgaacaagacacgcaatgattttcactcacccaaggtgttt 533728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 8565986 - 8566155
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| ||| || ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  8565986 agagattgatctctccaatccactatcaatgagttctt-acagagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 8566084  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    || |||||| | |||||||||||||  |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  8566085 aagttctacccattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgttt 8566155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 40147389 - 40147202
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  |  ||||||| |||    
T  40147389 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaaccct 40147291  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt-cactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| ||||||| ||||| ||||| ||| ||| || |||||||||||||||    
T  40147290 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgatttccactctcccaaggtg-tttacaattgtttcccaactct 40147202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 42428470 - 42428639
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || |||| || | |    
T  42428470 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaaaaaccat 42428568  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  42428569 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 42428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 238
Target Start/End: Original strand, 33906069 - 33906256
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||| |||| ||||||  |||||||||||||||||||||||||||||||||| | |||||| || |||  ||| |||| || ||  || || ||||    
T  33906069 aagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaaggattacaagaagttagcttcgacaagctctccaagcactaacc 33906168  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgat-ttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||| ||| | |||| |||| || ||||||     ||| |||||||||| ||||||| | ||| ||||||  |||||||||| |||||||    
T  33906169 taatttatacccatttcacaatttcttcccat----gagacactcaatgatgttcactctcgcaaggtgtttctcatttgtttcacaactct 33906256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 27637653 - 27637776
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||| | |||||| |||||| ||| ||||| ||   | ||||||| ||    
T  27637653 agagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaaccc 27637750  T
Q  148 taatttctactc-ttttctcaatctc 172  Q
    |||||||||| | |||||||||||||    
T  27637751 taatttctacccattttctcaatctc 27637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 28750695 - 28750866
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||  | |||||  ||||||  ||||||||  |   | ||||||| |||    
T  28750695 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgggttacaggaaattaacttcaacaatttcataaagaacaaccct 28750793  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttc 220  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||||    
T  28750794 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttttc 28750866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 9049390 - 9049461
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||| ||||||  ||||||||    
T  9049390 atctctccaatccactgtcaatgagttctt-acaaagagatacaaaatggttacaagaaattagcttcaacaa 9049461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 13239879 - 13239800
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| ||||||  ||||||||    
T  13239879 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagcttcaacaa 13239800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 38747133 - 38747026
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| | ||||||||||||| ||| ||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  38747133 agagattgatctctccaatcctctatcaatgagtt-tttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 38747035  T
Q  149 aatttctac 157  Q
    |||||||||    
T  38747034 aatttctac 38747026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 39468589 - 39468696
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  39468589 agagattgatctctctaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 39468687  T
Q  149 aatttctac 157  Q
    |||||||||    
T  39468688 aatttctac 39468696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 233
Target Start/End: Original strand, 10700650 - 10700872
Alignment:
Q  9 tatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgttt 108  Q
    |||||||||||||| ||  || |||||  |||||||||  |||||   ||||||||| |||||||||||||||||||||  ||||||||||||||   ||    
T  10700650 tatttactcagttcggtgaaacaatgacctactatgggggagagag--atctctccacttcactatcaatgagttctttttaaagagatacaaaaatgtt 10700747  T
Q  109 acaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgc 207  Q
    | ||  |||||  |||||||| || ||  ||||||||||||||||||||  ||||  ||||||  |  ||| ||||| | ||||||||| |||||| | |    
T  10700748 ataa-gaattagcttcaacaagctctctaagaacaaacctaatttctaccttttttccaatctattttcatgaacaaaatactcaatgattttcacgcac 10700846  T
Q  208 ccaatgtgttttccatttgtttccca 233  Q
    |||| |||||| | | ||||||||||    
T  10700847 ccaaggtgtttcctaattgtttccca 10700872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 37439269 - 37439216
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  37439269 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 37439216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 5058173 - 5058121
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  5058173 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 5058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 538153 - 538074
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| |||||||||||  ||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  538153 agagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 538074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 31183091 - 31182993
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| || ||||||||||||| |||||||| ||||| ||||| |||||| ||||||  || ||||||||  || ||||||| |||||||||||    
T  31183091 atctctccaatccagtatcaatgagttc-ttacaaagggatac-aaatggttacaagaaattaacttaaacaaactcacaaagaacaatcctaatttcta 31182994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 13343188 - 13343120
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||||||||||||| | |||||| ||||||    
T  13343188 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaaggattacaagaaatta 13343120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 32636952 - 32636883
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  | |||||| ||||||    
T  32636952 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgggttacaagaaatta 32636883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 30682962 - 30683043
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagt-tctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| ||||||||||| |||||||||||||| |  ||||||||| |||||||| | |||||| ||||||  ||||||||    
T  30682962 agagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagcttcaacaa 30683043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 32609646 - 32609561
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatt 152  Q
    |||| ||||||| ||||||||||||||| ||||||||   |||||| ||||||  ||||||||||| ||| |||| |||| |||||    
T  32609646 ttcaatatcaataagttctttacaaagaaatacaaaagagttacaagaaattaacttcaacaaactctcaaagaataaacttaatt 32609561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 5007842 - 5007806
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||||||||||||||||||||||||||||| ||||    
T  5007842 ttcactatcaatgagttctttacaaagagatagaaaa 5007806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 32583340 - 32583376
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32583340 ttcactatcaatgagttctttacaaaaagatacaaaa 32583376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 42927030 - 42926967
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| || |||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||    
T  42927030 tactatgagagagagatttatttcttcaatccactgtcaatgagttc-ttacaaagagatacaaa 42926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 132
Target Start/End: Complemental strand, 8445844 - 8445761
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaact 132  Q
    ||||||| |||| || |||  ||||||||| ||||||||| ||||| |||||||| | |||||| ||||||  |||||||||||    
T  8445844 agagattcatctttctaatctactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttcaacaaact 8445761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 16409603 - 16409480
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  16409603 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccct 16409504  T
Q  149 aatttctactcttttctcaatctc 172  Q
    ||||||||| |||||  |||||||    
T  16409503 aatttctaccctttttccaatctc 16409480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 26178010 - 26177895
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  26178010 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccct 26177911  T
Q  149 aatttctactcttttc 164  Q
    ||||||||| ||||||    
T  26177910 aatttctacccttttc 26177895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 36074083 - 36074135
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||    
T  36074083 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaa 36074135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 42309964 - 42310054
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    |||||||||  ||||||| ||||| | ||| |||||||||| ||||||| ||||||||||||||||   |||||| ||||||  ||||||||    
T  42309964 tactatgggggagagattgatctcgctaatccactatcaataagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaa 42310054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 9789264 - 9789318
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  9789264 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 9789318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 16137136 - 16137074
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||||||||||| ||| |||||||| || ||| | |||||| ||||||    
T  16137136 atctctcaaattcactatcaatgagttgttttcaaagagaaaccaaaaggttacaagaaatta 16137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 18441688 - 18441742
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  18441688 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 18441742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 30182716 - 30182647
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| || |||||||||| |||| | |||||| ||||||    
T  30182716 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatagaaaagggttacaagaaatta 30182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Original strand, 31992247 - 31992289
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaa 101  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||    
T  31992247 ctctccaattcactatcaaagagttatttacaaatagatacaa 31992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 163
Target Start/End: Complemental strand, 22097981 - 22097879
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctact 158  Q
    ||||| ||| ||||||||||||||| |||||||| ||||||  || | ||| || ||||||  ||||||||| | ||  ||||||| ||||||||||||     
T  22097981 ctctctaatccactatcaatgagttttttacaaatagatac--aagggttataagaaattaacttcaacaaattctccaagaacaaccctaatttctacc 22097884  T
Q  159 ctttt 163  Q
    |||||    
T  22097883 ctttt 22097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 27015651 - 27015599
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| |||| | |||| |||||||||||||||| |||||||||||||||||    
T  27015651 agagattgatctgtacaatccactatcaatgagttc-ttacaaagagatacaaa 27015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 33906306 - 33906343
Alignment:
Q  240 aggatcttctcttttggttacccaagactcacctaagt 277  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  33906306 aggatcttctcttttggtttcccaagactcacccaagt 33906343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 218
Target Start/End: Complemental strand, 4160671 - 4160591
Alignment:
Q  138 agaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    ||||||||||||||||||||  |||||  ||||||||| ||| | ||| | | ||| |||||||||||  |||||||||||    
T  4160671 agaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt 4160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 40293601 - 40293569
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaa 92  Q
    ||||||||| |||||||||||||||||||||||    
T  40293601 tctccaatttactatcaatgagttctttacaaa 40293569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 236
Target Start/End: Complemental strand, 32091583 - 32091420
Alignment:
Q  73 atcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctc 172  Q
    ||||||| |||||||||||||||||||||||   |||||| |||||| |||||||||||| ||  |||||||||||||||||||   ||||| ||||||     
T  32091583 atcaatgtgttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaatctt 32091484  T
Q  173 ctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaact 236  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||  || |||||||| ||||    
T  32091483 ctcccatgaacaagagactcaatgatttcgctcacccaatgtgtttctcaattgtttccaaact 32091420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 33090007 - 33089856
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||  |||||||| || ||  ||||||||| |    
T  33090007 agagattgatctctctaatccactatcaatgagttctttacagagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaacat 33089908  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||| || | |||||||||| |||||| ||||||| ||||||||||||    
T  33089907 aatttctattcatctctcaatctcttcccatgaacaagacactcaatgattt 33089856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 220
Target Start/End: Complemental strand, 34112938 - 34112773
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||  ||||||  |||||||| || || |||||||||| |||||||||    
T  34112938 atctctccacttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaacataatttcta 34112839  T
Q  157 ctcttttct--caatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttc 220  Q
    || |||| |  ||||||| ||||||  |||| || |||||||||||||| ||||||||||||||||    
T  34112838 ctttttttttccaatctcttcccatgtacaaaaggctcaatgatttcacccgcccaatgtgttttc 34112773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 38811237 - 38811397
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||  ||||||||||||||||  |||||||||| |||||||||| | || | ||||||  ||||||||||| ||  ||||||||| |||||| ||    
T  38811237 atctctccgcttcactatcaatgagtcatttacaaaga-atacaaaatggtcactagaaattaaattcaacaaactctccaagaacaaacttaatttgta 38811335  T
Q  157 ctcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    | | |||||||||||| | | || ||||||||||||||||||||||||| ||||| ||||||    
T  38811336 cccatttctcaatctctttctatgaacaagagactcaatgatttcactcacccaaggtgttt 38811397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 205
Target Start/End: Original strand, 21703833 - 21704032
Alignment:
Q  6 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    |||| ||||| |||||| ||| || |||||  ||||||||| |  ||||| || |||||||| |||| ||||||||||||||||||| |||||||||| |    
T  21703833 aaatgtttacccagttcggtcaaacaatgacctactatggggat-agattgatatctccaatccactgtcaatgagttctttacaaaaagatacaaaaag 21703931  T
Q  106 tttacaataaattattttcaacaaactatcatagaac-aaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcact 204  Q
      ||||| |||| || |||||||| || ||  ||||| |||||||||||||||  ||||||||||||| |||||  ||||| ||||| ||||||||||||    
T  21703932 ggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaacaatagacttaatgatttcact 21704031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 12073551 - 12073413
Alignment:
Q  18 agttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaat 117  Q
    ||||| |||||| |||||  |||| ||| | ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||||||||    
T  12073551 agttcggtccaacaatgacctactctggaagagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaataaat 12073453  T
Q  118 tattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    ||  |||||||| ||  || ||||||||||||||||||||    
T  12073452 tagcttcaacaagctcacaaagaacaaacctaatttctac 12073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 26175676 - 26175845
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| |||||| ||||||||| ||  || ||||||| |||    
T  26175676 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccct 26175774  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||| | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  26175775 aatttctccccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 26175845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 26699439 - 26699671
Alignment:
Q  6 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    |||| ||||| |||||| |||||| |||||  |||| ||||| ||||||| ||||||||||| || ||| ||||||||||||||||||||||||||||      
T  26699439 aaatttttacccagttcggtccaacaatgacctactctgggatagagattgatctctccaatccattataaatgagttctttacaaagagatacaaaaga 26699538  T
Q  106 tttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactctt--ttctcaatctcctcccataaacaagagactcaatga-tttc 201  Q
     |||||| ||||||  |||||||| ||  || |||||||| |||||| | ||| |||  |||| ||||| |||  |||||||||| | ||||||| ||||    
T  26699539 gttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatctataccctttcttctgaatct-ctctaataaacaagacattcaatgattttc 26699637  T
Q  202 actcgcccaatgtgttttccatttgtttcccaact 236  Q
    |||| ||||| ||| ||| || |||||||||||||    
T  26699638 actcacccaaagtg-tttacaattgtttcccaact 26699671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 200
Target Start/End: Original strand, 22882791 - 22882941
Alignment:
Q  50 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 149  Q
    |||||| || |||| ||| ||||| ||||||||||||||| ||||||||||||| | |||||| ||||||  ||||||||||| ||  ||||||||||||    
T  22882791 gagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaaccta 22882890  T
Q  150 atttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||| ||  | ||| |||||||| | |||| ||||||  ||||||||||||    
T  22882891 atttttatccatttttcaatctctttccatgaacaaggcactcaatgattt 22882941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 200
Target Start/End: Original strand, 22934455 - 22934605
Alignment:
Q  50 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 149  Q
    |||||| || |||| ||| ||||| ||||||||||||||| ||||||||||||| | |||||| ||||||  ||||||||||| ||  ||||||||||||    
T  22934455 gagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaaccta 22934554  T
Q  150 atttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||| ||  | ||| |||||||| | |||| ||||||  ||||||||||||    
T  22934555 atttttatccatttttcaatctctttccatgaacaaggcactcaatgattt 22934605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 155
Target Start/End: Complemental strand, 33990016 - 33989867
Alignment:
Q  6 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    |||| ||||| ||||||| ||||| |||||  |||| |||   ||||||| ||||||||||| |||||| || ||||| ||||||||||||||||||| |    
T  33990016 aaatgtttacccagttcaatccaagaatgacctactctggtggagagattgatctctccaatccactattaacgagttatttacaaagagatacaaaagg 33989917  T
Q  106 tttacaataaattattttcaacaaactatcatagaacaaacctaatttct 155  Q
     |||||| ||||||  ||||||||||| ||  |||||||||||| |||||    
T  33989916 attacaagaaattagcttcaacaaactctctaagaacaaacctagtttct 33989867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 8665536 - 8665429
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| || ||| ||||||| |||    
T  8665536 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaaccct 8665438  T
Q  149 aatttctac 157  Q
    |||||||||    
T  8665437 aatttctac 8665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 12119668 - 12119478
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc- 147  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||||  ||||| ||  |  || ||||||||||     
T  12119668 agagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaacca 12119569  T
Q  148 taatttctactcttttct-caatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||||||||||||| | |||||| | || || ||||||| ||||| ||| |||||||| ||||| ||  ||| || |||||||||||||||    
T  12119568 taatttctactcttttttccaatct-cacctatgaacaagacactcattgattttcactctcccaaggt-atttacaattgtttcccaactct 12119478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 31474279 - 31474109
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaa-acc 147  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||||||   | ||||||| |||    
T  31474279 agagatttatctctccaatcaactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacc 31474181  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31474180 taatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaagtgttt 31474109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 56178677 - 56178827
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  56178677 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 56178775  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  56178776 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattt 56178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 41961528 - 41961393
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||| ||||||     | ||| || ||   |||||||| ||||||||||||||||  |    
T  41961528 ttcaatatcaatgacttctttacaaagagatacaaaatgattacaagaaattagcactaccaagctctccatgaacaaacttaatttctactctttttcc 41961429  T
Q  167 aatctcctcccataaacaagagactcaatgatttca 202  Q
    |||||| || ||| ||||||||||||||||||||||    
T  41961428 aatctcttctcatgaacaagagactcaatgatttca 41961393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 54199954 - 54200115
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||||||||||    
T  54199954 atctctctaattcactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 54200052  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  54200053 cccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 54200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 6542219 - 6542390
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||| | | |||| |||||| ||||||||| ||  || |||||||| ||    
T  6542219 agagattgatctctccaatccactatcaacgagttc-ttacaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcc 6542317  T
Q  148 taatttctac--tcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||||  | ||||| |||||||| || || ||||||| ||||||| | |||||||| ||||| ||||||    
T  6542318 taatttctaccattttttcccaatctcc-ccaatgaacaagacactcaataattttcactcacccaaggtgttt 6542390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 379508 - 379385
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||| ||||||| |||||| ||||||||  | |||||| ||||||  |||||||| ||  || |||||||||||    
T  379508 agagattgatctctccaatccactatcaattagttctt-acaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacct 379410  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  379409 aatttctacccattttctcaatctc 379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 27417005 - 27417112
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  27417005 agagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 27417103  T
Q  149 aatttctac 157  Q
    |||||||||    
T  27417104 aatttctac 27417112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 5429807 - 5429638
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||  | |||||| ||||||  |||||||| ||  |  |||| || |||    
T  5429807 agagattgatctctccaatccactatcaatgagttc-ttacaaatagatacaaatgggttacaagaaattagcttcaacaagctcacgaagaataaccct 5429709  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||||| ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  5429708 aatttctactcattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 5429638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 218
Target Start/End: Complemental strand, 6677597 - 6677428
Alignment:
Q  50 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatc--atagaacaaacc 147  Q
    |||||| ||||||| ||| || |||||| || ||||||||||||| |||||||| | |||||| ||||||  |||||||| || ||  | | || |||||    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacc 6677498  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    ||||||||||  ||||| |||| || |||||  ||||||||||||||| |||||||||  |||||||||||    
T  6677497 taatttctaccattttc-caatttcttcccaagaacaagagactcaattatttcactcatccaatgtgttt 6677428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 36994652 - 36994483
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  36994652 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacctt 36994554  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36994553 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 47038451 - 47038618
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||| |||||| ||||| |||||| ||||||  |||||||| ||  || ||||||| |||    
T  47038451 agagattgatctctccaatccactatcaatgag-tccttacaaacagatac-aaatgattacaagaaattagcttcaacaagctcacaaagaacaaccct 47038548  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  47038549 aatttctacccattttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 47038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 2209842 - 2209734
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| ||||||  |||||||| ||  || |||| || ||    
T  2209842 agagattaatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaccc 2209744  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  2209743 taatttctac 2209734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 12745470 - 12745645
Alignment:
Q  43 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac 142  Q
    |||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| |||||| |||  ||||  |  || |||||    
T  12745470 tggggaagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac 12745568  T
Q  143 aaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    || |||||||||||| | |||||  ||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  12745569 aaccctaatttctacccattttcctaatct-cgccaatgaacaagacactcaatgattttcactcacccaaggtgttt 12745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 34570454 - 34570625
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||   | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  34570454 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 34570552  T
Q  149 aatttcta-ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttc 220  Q
    |||||||| || ||||| |||||| | || || ||||||| ||||||||| |||||||| |||||  |||||||    
T  34570553 aatttctacctattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaagatgttttc 34570625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 41964544 - 41964436
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||| | |||||||||||||  || ||||| ||  || ||||||| ||    
T  41964544 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaaatgggttacaataaattagcttaaacaagctcacaaagaacaaccc 41964446  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  41964445 taatttctac 41964436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 71 - 184
Target Start/End: Original strand, 44570427 - 44570539
Alignment:
Q  71 ctatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatc 170  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||| ||||||||| || ||  | ||||||| |||||||||| | ||| ||||||    
T  44570427 ctatcaatgagttctttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttctac-catttttcaatc 44570525  T
Q  171 tcctcccataaaca 184  Q
    || |||||| ||||    
T  44570526 tcttcccatgaaca 44570539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 46703629 - 46703505
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  46703629 agagattgatctctccaatccactataaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 46703531  T
Q  148 taatttctactc-ttttctcaatctc 172  Q
    |||||||||||| ||||| |||||||    
T  46703530 taatttctactcattttcccaatctc 46703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 48143171 - 48143001
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||  ||||||||||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  48143171 agagattgatctctccaatccactatcaatgagttc-ttatgaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 48143073  T
Q  149 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||||  | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  48143072 aatttctacctttttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 48143001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 6199921 - 6200020
Alignment:
Q  58 tctctccaattcactatcaatgagttctttacaaaga--gatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct 155  Q
    |||||||| ||||||||||||||||| |||||||| |  |||||||||   ||||||||||||| |||||||||| | ||  ||||||||||||||||||    
T  6199921 tctctccacttcactatcaatgagttatttacaaatatagatacaaaagagttacaataaattagtttcaacaaagtgtctaagaacaaacctaatttct 6200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 9927498 - 9927605
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  9927498 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 9927596  T
Q  149 aatttctac 157  Q
    |||||||||    
T  9927597 aatttctac 9927605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 40632573 - 40632466
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||  ||    
T  40632573 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactct 40632475  T
Q  149 aatttctac 157  Q
    |||||||||    
T  40632474 aatttctac 40632466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 50673887 - 50674009
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || || |||| |||    
T  50673887 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaag-acaatcct 50673984  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||||| |||||||||||||    
T  50673985 aatttctactcattttctcaatctc 50674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 54883148 - 54882961
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || | ||||| |||    
T  54883148 agagattgatccctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccct 54883050  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||||    
T  54883049 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaaggtg-tttacaattgtttcccaactct 54882961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 217
Target Start/End: Complemental strand, 3913576 - 3913408
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||  | ||| || ||||||  |||||||||||  || ||||||   ||    
T  3913576 agagattgatctctccaatccactatcaatgagttctt-acaaagatatacaaatgggttaaaagaaattagcttcaacaaactcacaaagaacagctct 3913478  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgtt 217  Q
    ||||||||||| ||||| |||||||  |  || ||||||| ||||||||| |||||||| ||||| |||||    
T  3913477 aatttctactcattttcccaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 24969238 - 24969133
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 150  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || |||||||| ||||    
T  24969238 agatttatctctccaatccactatcaattagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaa 24969140  T
Q  151 tttctac 157  Q
    |||||||    
T  24969139 tttctac 24969133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 37740753 - 37740640
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  37740753 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 37740655  T
Q  149 aatttctactctttt 163  Q
    ||||| ||| |||||    
T  37740654 aatttataccctttt 37740640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 4588087 - 4587979
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    |||||||  |||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  |||||||| ||  || |||||||| |     
T  4588087 agagattgttctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatct 4587989  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  4587988 taatttctac 4587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 200
Target Start/End: Complemental strand, 53345319 - 53345195
Alignment:
Q  76 aatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaa-caaacctaatttctactcttttctcaatctcct 174  Q
    ||||||||||||||||| ||||| |||| | |||||| |||||| ||||||||| ||  || |||| ||| | |||||||||   |||||||||||| ||    
T  53345319 aatgagttctttacaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaaagaatcaaccttaatttctatcattttctcaatct-ct 53345221  T
Q  175 cccataaacaagagactcaatgattt 200  Q
    || |||||||||| ||||||||||||    
T  53345220 ccgataaacaagacactcaatgattt 53345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 12744081 - 12744156
Alignment:
Q  43 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    |||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  12744081 tggggaagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 12744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 35662561 - 35662462
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||||||   | ||||||| |||||||||||    
T  35662561 atctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcataaagaacaaccctaatttcta 35662463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 8648267 - 8648161
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  | ||| || ||||||  |||||||||||  ||  |||||| |||    
T  8648267 agagattgatctctccaatccaatatcaatgagttc-ttacaaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaacaaccct 8648169  T
Q  149 aatttcta 156  Q
    ||||||||    
T  8648168 aatttcta 8648161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 21688374 - 21688253
Alignment:
Q  52 gatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaat 151  Q
    |||| |||||||||||||| ||||||||||||| || | ||||||||||||    |||||| |||||| ||||||||| ||  || ||||||| ||||||    
T  21688374 gattgatctctccaattcattatcaatgagttc-ttccgaagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaacaaccctaat 21688276  T
Q  152 ttctactc--ttttctcaatctc 172  Q
    |||||| |  |||||||||||||    
T  21688275 ttctacccatttttctcaatctc 21688253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 12743965 - 12744034
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  12743965 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 12744034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 12745354 - 12745423
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  12745354 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 12745423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 48893678 - 48893851
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa----actatcatagaacaa 144  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||    |||||| ||||||  ||||||||    || | ||  ||||||    
T  48893678 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaacaa 48893776  T
Q  145 acctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
     |||||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  48893777 ccctaatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 48893851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 6656084 - 6656032
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  6656084 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 6656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 26364364 - 26364257
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||    |||||| ||||||  ||||||||  |  || ||||||| |||    
T  26364364 agagattgatctctccaatccactattaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccct 26364266  T
Q  149 aatttctac 157  Q
    |||||||||    
T  26364265 aatttctac 26364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 200
Target Start/End: Original strand, 35369495 - 35369631
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctact 158  Q
    |||| |||||||| |||||||||||||||||||||||||| |    ||||  || |||||| ||||| ||| ||  |  |||||||||||||||||||||    
T  35369495 ctcttcaattcaccatcaatgagttctttacaaagagataga----gttt-taagaaattagtttcatcaagctcaccaagaacaaacctaatttctact 35369589  T
Q  159 cttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    | |||| |||| || | | || ||||||| ||||||||||||    
T  35369590 catttcccaatgtcttgcaatgaacaagacactcaatgattt 35369631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 36463429 - 36463598
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||| |||| |||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||  |||    
T  36463429 agagattgatctctccaatccactgtcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacagccct 36463527  T
Q  149 aatttcta-ctcttttctcaatctcctcccataaacaagagactcaatg-atttcactcgcccaatgtgttt 218  Q
    |||||||| |  ||||| |||||| | || || ||||||| |||||||| ||||||||| ||||| ||||||    
T  36463528 aatttctatccattttcccaatct-caccaatgaacaagacactcaatgaatttcactcacccaaggtgttt 36463598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 51337192 - 51337122
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattat 120  Q
    ||||||| ||||||| ||| |||||||||||||||| ||| |||||||||||||| | ||| ||||||||||    
T  51337192 agagattgatctctctaatacactatcaatgagttc-ttaaaaagagatacaaaagggttataataaattat 51337122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 52095402 - 52095571
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| || ||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  52095402 agagattgatctctccaatccactatcaaagatttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 52095500  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  52095501 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 52095571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 163
Target Start/End: Original strand, 5207871 - 5207996
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcat 137  Q
    |||| ||||| ||||||| |||| |||||| |||||||||||||||| ||||||| ||||| | || | || ||||||||||  ||||||||  |  ||     
T  5207871 tactctgggagagagattgatctttccaatccactatcaatgagttc-ttacaaatagatatacaagggttgcaataaattagcttcaacaagttcacaa 5207969  T
Q  138 agaacaaa-cctaatttctactctttt 163  Q
    |||||||| |||||||||||| |||||    
T  5207970 agaacaaaccctaatttctaccctttt 5207996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 5370123 - 5370192
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||| | | |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  5370123 agagattgatctctctagtccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 5370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 44967869 - 44968038
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    ||||||| ||| ||| |||  ||| |||| ||||| |||||||||||||||||| || |||||| |||||   |||| ||| || ||  ||| |||| ||    
T  44967869 agagattgatccctctaatctactctcaacgagttttttacaaagagatacaaa-tggttacaagaaattggcttcagcaagctctccaagagcaaaacc 44967967  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    ||||||||||  ||||| ||||||| |||||  ||||| || ||||||||||||||||  ||||| |||||    
T  44967968 taatttctaccattttcccaatctcttcccaagaacaacaggctcaatgatttcactcaaccaatttgttt 44968038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 37754989 - 37755081
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaa 130  Q
    |||||||||  ||||||| |||||| |||  || |||||||||||| |||| ||||||||| |||| | |||||| ||||||| |||| ||||    
T  37754989 tactatgggggagagattgatctcttcaaaccattatcaatgagttttttagaaagagataaaaaaaggttacaagaaattatcttcaccaaa 37755081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 41639554 - 41639447
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||| |||||||| ||||||| |||||||||  | |||||| ||||||  ||||| ||  |  || ||||||| |||    
T  41639554 agagattgatctctccaatccactatcgatgagttc-ttacaaatagatacaaatgggttacaagaaattagcttcaaaaagttcacaaagaacaaccct 41639456  T
Q  149 aatttctac 157  Q
    |||||||||    
T  41639455 aatttctac 41639447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 46147431 - 46147538
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || |||||||| ||||||||| |||||||| |||||||||||||||    |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  46147431 agagattgatgtctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccct 46147529  T
Q  149 aatttctac 157  Q
    |||||||||    
T  46147530 aatttctac 46147538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 52467394 - 52467501
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||  |||| || |||||| ||||||||  | |||||| | ||||  |||||||| ||  || |||||||||||    
T  52467394 agagattgatctctccaatccactatcaaaaagttatt-acaaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaacct 52467492  T
Q  149 aatttctac 157  Q
    |||||||||    
T  52467493 aatttctac 52467501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 29254628 - 29254570
Alignment:
Q  43 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||| ||||||| ||||||||||| ||||||||| |||||| ||||||||||| |||||    
T  29254628 tgggagagagattgatctctccaatccactatcaacgagttc-ttacaaagagacacaaa 29254570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 29999846 - 29999969
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||||||   ||| ||||||||||   |||||| ||||||  ||  |||   |  || ||||||| |||    
T  29999846 agagattgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaaccct 29999945  T
Q  149 aatttctactcttttctcaatctc 172  Q
    ||||||||| |||||| |||||||    
T  29999946 aatttctacccttttcccaatctc 29999969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 50262743 - 50262845
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 150  Q
    ||||| || ||||||||  ||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |||    
T  50262743 agattgatatctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccgtaa 50262841  T
Q  151 tttc 154  Q
    ||||    
T  50262842 tttc 50262845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 8832296 - 8832254
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaa 101  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||    
T  8832296 ctcttcaattcactatcaataagttctttacaaatagatacaa 8832254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 12739590 - 12739659
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||| |||||||||  | |||||| ||||||    
T  12739590 agagattgatctctccaatccactatcaatgagttc-atacaaatagatacaaatgggttacaagaaatta 12739659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 12747796 - 12747865
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||| |||||||||  | |||||| ||||||    
T  12747796 agagattgatctctccaatccactatcaatgagttc-atacaaatagatacaaatgggttacaagaaatta 12747865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 35370096 - 35370142
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagag 95  Q
    |||||| || |||| |||||||| |||||||||||||||||||||||    
T  35370096 agagatctacctcttcaattcaccatcaatgagttctttacaaagag 35370142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 37229761 - 37229814
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  37229761 agagattgatctctccaatccactataaatgagttc-ttacaaagagatataaaa 37229814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 52065718 - 52065672
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||||    
T  52065718 atctctccacttcactatcaatgagtttctaacaaagagatacaaaa 52065672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 5350031 - 5349986
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||||  |||| |||||| ||||||||||||||||||||||||    
T  5350031 atctctccgcttcattatcaacgagttctttacaaagagatacaaa 5349986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 13009492 - 13009536
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||    
T  13009492 atctctccaatccactatcaatgagttc-ttacaaagggatacaaa 13009536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 45687230 - 45687274
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  45687230 atctctccaatccactatcaatgagttc-ttacaaatagatacaaa 45687274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 48142440 - 48142525
Alignment:
Q  72 tatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttcta 156  Q
    ||||||||||||||||||||||||||| | || | |||||| ||| ||  |||||||| ||  || |||||||| |||||||||||    
T  48142440 tatcaatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttcta 48142525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 19222420 - 19222384
Alignment:
Q  65 aattcactatcaatgagttctttacaaagagatacaa 101  Q
    |||| |||||||||||||| |||||||||||||||||    
T  19222420 aatttactatcaatgagttatttacaaagagatacaa 19222384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 238
Target Start/End: Original strand, 43135513 - 43135613
Alignment:
Q  138 agaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactc 237  Q
    ||||||| | |||||| ||||| ||| | ||||| ||||||| ||||||| | |||||| |||||||   |||| ||||||  || ||||||||||||||    
T  43135513 agaacaaccttaatttatactcattttttaatcttctcccatgaacaagaaattcaatggtttcacttatccaaggtgtttctcaattgtttcccaactc 43135612  T
Q  238 t 238  Q
    |    
T  43135613 t 43135613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 25073697 - 25073508
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || |||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||| ||  || ||||| ||  |  |||| ||| ||    
T  25073697 agagattgatttctctaatccactatcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatct 25073598  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||||||  |||| ||||||||||||||| ||||||| ||||||||||||||||| |||||  ||||| ||| |||||||||||||||    
T  25073597 aatttctaccattttttcaatctcctcccatgaacaagatactcaatgatttcactcacccaagatgtttcccaattgtttcccaactct 25073508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 200
Target Start/End: Complemental strand, 4045544 - 4045401
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttct 155  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||| ||||||  |||||||| ||   | |||||||| ||||||||||    
T  4045544 atctctccaatccactatcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttct 4045445  T
Q  156 actcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||  ||||| |||||| |||| |||||||||| ||||||||||||    
T  4045444 accattttcccaatct-ctccaataaacaagacactcaatgattt 4045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 9183071 - 9183240
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||| |  || ||||||| |||    
T  9183071 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccct 9183169  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  9183170 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 9183240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 5043787 - 5043632
Alignment:
Q  17 cagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaa 116  Q
    |||||| |||||| |||||  ||||||||   ||||||| |||||||||||  ||||||||||||||| |||||||||||||||||    |||||| |||    
T  5043787 cagttcggtccaacaatgacctactatggaggagagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaa 5043689  T
Q  117 ttattttcaacaaactatcatagaacaaacctaatttctactc-ttttctcaatctc 172  Q
    |||  |||||||| ||  || |||||||||||||||||||||| |||||||||||||    
T  5043688 ttagcttcaacaagctcacaaagaacaaacctaatttctactcattttctcaatctc 5043632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 3808748 - 3808856
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| |||||| ||||||||| ||  || ||||||| ||    
T  3808748 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccc 3808846  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  3808847 taatttctac 3808856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 2972979 - 2973086
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||||||    
T  2972979 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacct 2973077  T
Q  149 aatttctac 157  Q
    |||||||||    
T  2973078 aatttctac 2973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 21593792 - 21593605
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  21593792 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 21593694  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||||    
T  21593693 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaaggtg-tttacaattgtttcccaactct 21593605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 21589059 - 21588952
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  21589059 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 21588961  T
Q  149 aatttctac 157  Q
    |||||||||    
T  21588960 aatttctac 21588952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 5406240 - 5406389
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5406240 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 5406338  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  5406339 aatttctaccattttcccaatct-caccaatgaacaagacactcaatgattt 5406389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 5410565 - 5410714
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5410565 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 5410663  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  5410664 aatttctaccattttcccaatct-caccaatgaacaagacactcaatgattt 5410714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 5413434 - 5413583
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5413434 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccct 5413532  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  5413533 aatttctacctttttcccaatct-caccaatgaacaagacactcaatgattt 5413583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 17758150 - 17758044
Alignment:
Q  50 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 149  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| ||||    
T  17758150 gagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacccta 17758052  T
Q  150 atttctac 157  Q
    ||||||||    
T  17758051 atttctac 17758044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 26830163 - 26830270
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||  ||    
T  26830163 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaacaactct 26830261  T
Q  149 aatttctac 157  Q
    |||||||||    
T  26830262 aatttctac 26830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 28137448 - 28137617
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  28137448 agagattgatctctccaatccactatcaatgagttc-ttacaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccct 28137546  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| || ||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  28137547 aatttctacccattttcccattct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 28137617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 31404715 - 31404837
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  31404715 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 31404813  T
Q  149 aatttctactcttttctcaatctc 172  Q
    |||||||||  ||||| |||||||    
T  31404814 aatttctaccattttcccaatctc 31404837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 5409109 - 5409162
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  5409109 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 5409162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 17763118 - 17762995
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||| ||||||| |||||||||||||||| || |||| |||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  17763118 agagattgatcactccaatccactatcaatgagttc-ttccaaaaagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 17763020  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  17763019 aatttctacccattttctcaatctc 17762995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 153
Target Start/End: Original strand, 26954326 - 26954429
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  26954326 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 26954424  T
Q  149 aattt 153  Q
    |||||    
T  26954425 aattt 26954429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 3072799 - 3072853
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||||||||||||||||||||||   ||||||||||||||    
T  3072799 agagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaa 3072853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 5740055 - 5740117
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||  |||||||||    
T  5740055 ttcattatcagtaagttctttacaaagaaatacaaaaggtttacaataaattggtttcaacaa 5740117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 30834576 - 30834645
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  30834576 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 30834645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 33160392 - 33160445
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  33160392 agagattgatctctccaatccaccatcaatgagttc-ttacaaagagatacaaaa 33160445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 2171572 - 2171624
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||    
T  2171572 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaa 2171624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 603128 - 603207
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| || |||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  ||||||||    
T  603128 agagattgatttctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaa 603207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 3038943 - 3039050
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||| || |||||| |||||||||||||||||  | |||||| ||||||  ||||| || ||  ||  |||||| |||    
T  3038943 agagattaatctctccaatccactattaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaacaaccct 3039041  T
Q  149 aatttctac 157  Q
    |||||||||    
T  3039042 aatttctac 3039050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 12221155 - 12221258
Alignment:
Q  61 ctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactct 160  Q
    ||||| |||||| ||||| | |||||||||||| |||||||||   |||||| |||||| ||||||| || | |   |||||||||||||||| |||||     
T  12221155 ctccacttcactgtcaattaattctttacaaagtgatacaaaagagttacaaaaaattagtttcaacgaattcttcaagaacaaacctaatttatactca 12221254  T
Q  161 tttc 164  Q
    ||||    
T  12221255 tttc 12221258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 22424866 - 22424974
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa--tgtttacaataaattattttcaacaaactatcatagaacaaac 146  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||   | |||||| ||||||  || ||||| ||  || ||||||| |    
T  22424866 agagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaacc 22424963  T
Q  147 ctaatttctac 157  Q
    |||||||||||    
T  22424964 ctaatttctac 22424974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 26800715 - 26800662
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat 104  Q
    ||||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  26800715 agagattgatctctccaatccactat-aatgagttctt-acaaagagatacaaaat 26800662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 2908586 - 2908533
Alignment:
Q  50 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||| || ||| |||| |||||||||||||||||||||||  ||||||||||    
T  2908586 gagattgatttcttcaatccactatcaatgagttctttacaataagatacaaaa 2908533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Complemental strand, 16569150 - 16569113
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctt 86  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  16569150 agagattgatctctccaatccactatcaatgagttctt 16569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 33211225 - 33211277
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| ||||||||||| || ||| ||||||||| |||||||||||||||||    
T  33211225 agagattgatctctccaatccattataaatgagttc-ttacaaagagatacaaa 33211277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 9572719 - 9572667
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaa 101  Q
    ||||||| |||||| |||| ||||||||||| |||||| |||||||| |||||    
T  9572719 agagattgatctctgcaatccactatcaatgggttcttaacaaagagttacaa 9572667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 30218039 - 30218236
Alignment:
Q  4 aaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||| |||||  |||||||||||| ||||| ||||| ||||  || |||| |||| | |||  |||||||||||| || |||||||||||||||||||    
T  30218039 aaaaatgtttaccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaa 30218138  T
Q  104 tgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttc 201  Q
    || |||||| ||||||  ||||| || || ||  ||||||||||||| |||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  30218139 tggttacaagaaattagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaagacactcaatgatttc 30218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 206
Target Start/End: Original strand, 42261520 - 42261685
Alignment:
Q  44 gggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaaca 143  Q
    |||| ||||| | ||||||||  |||||||||||||||| ||||||||||| ||||||||   |||||| ||||||  |||||||| || ||  ||||||    
T  42261520 gggagagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaaca 42261619  T
Q  144 aacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 206  Q
    ||| ||||||||||  |||||||||||||||||   ||| ||||||||||||||||| ||||||||    
T  42261620 aacttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatgagttcactcg 42261685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 24398218 - 24398087
Alignment:
Q  17 cagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaa 116  Q
    |||||| |||||| |||||  |||||||||  ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| | |||||| |||    
T  24398218 cagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaa 24398119  T
Q  117 ttattttcaacaaactatcatagaacaaacct 148  Q
    |||  |||||||| ||  || |||||||||||    
T  24398118 ttagcttcaacaagctcacaaagaacaaacct 24398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 200
Target Start/End: Complemental strand, 33648343 - 33648148
Alignment:
Q  6 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    |||| ||||| |||||| |||||| |||||  |||| |||   ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |    
T  33648343 aaatgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctccaatccgctatcaatgagttctttacaaagaaatacaaaagg 33648244  T
Q  106 tttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
     |||||  ||||||  |||||||| ||  || |||||||| |||||||| |||  |||||||||||||||| |||  |||||| ||||||| ||||    
T  33648243 gttacaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatctcctctcatgtacaagacactcaattattt 33648148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 36318049 - 36318218
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | ||||||||||||| ||||||||| ||  || ||||||| |||    
T  36318049 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaaccct 36318147  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36318148 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36318218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 5723296 - 5723445
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5723296 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcct 5723394  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| ||||||||||||| | || || ||||||| ||||||||||||    
T  5723395 aatttctacccttttctcaatct-caccaatgaacaagacactcaatgattt 5723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 36988116 - 36988266
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| |||||| |||  |||| ||  |||||||||| |||    
T  36988116 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaaccct 36988214  T
Q  149 aatttctactcttttct-caatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| ||||| | ||||| || || || ||||||| ||||||||||||    
T  36988215 aatttctacccttttttccaatc-ccaccaatgaacaagacactcaatgattt 36988266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 38 - 210
Target Start/End: Original strand, 42019899 - 42020073
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgag--ttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatc 135  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||  || |||||||||||||||||||   |||||| ||||||  ||| |||| || |     
T  42019899 tactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagcttctacaagcttta 42019998  T
Q  136 atagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgccca 210  Q
      ||||||||| ||| |||||| |||||   |||||| |||||  || || ||||||||||||||||||| ||||    
T  42019999 taagaacaaacataaattctaccctttttctaatctcttcccaagaaaaatagactcaatgatttcactcaccca 42020073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 38312368 - 38312218
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||| || |||||||||||||||||  | |||||| |||||| |||||||||  |  || ||||||| |||    
T  38312368 agagattgatctctccaatccactatcaatgagatc-ttacaaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaaccct 38312270  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  38312269 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattt 38312218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 172
Target Start/End: Original strand, 7815272 - 7815436
Alignment:
Q  6 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    |||||||||| ||||||||||||||  |||| ||||||| | | |||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||      
T  7815272 aaatatttacccagttcagtccaatt-tgatatactatgtgga-gagattaatctctccaatccactataaatgagttc-ttacaaagagatacaaaaga 7815368  T
Q  106 tttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatctc 172  Q
     |||||| ||||||  |||||||| ||   | |||||||| ||||||||| ||  |||||||||||||    
T  7815369 gttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttcaacctttttctcaatctc 7815436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 17057409 - 17057578
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  17057409 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccct 17057507  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  17057508 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 17057578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 17085392 - 17085561
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  17085392 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccct 17085490  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  17085491 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 17085561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 723784 - 723891
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  723784 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 723882  T
Q  149 aatttctac 157  Q
    |||||||||    
T  723883 aatttctac 723891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 13121895 - 13121728
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    ||||||| || ||| |||| ||||||||||||||| | ||||||||||||||||  | |||||| ||||||| |||||||| ||  || |||||||| ||    
T  13121895 agagattgatttcttcaatccactatcaatgagtt-tctacaaagagatacaaa--ggttacaagaaattatcttcaacaagctcacaaagaacaaaccc 13121799  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||||  ||||| || ||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  13121798 taatttctaccattttcccagtct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 13121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 26353304 - 26353189
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc-taatttct 155  Q
    ||||||||||| |||||||||||||| ||| ||||| ||||||||||   |||||| ||||||  |||||||||||  || |||||||||| ||||||||    
T  26353304 atctctccaatccactatcaatgagtactt-acaaaaagatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttct 26353206  T
Q  156 actcttttctcaatctc 172  Q
    || ||||| ||||||||    
T  26353205 acacttttttcaatctc 26353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 45727057 - 45726950
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||  ||    
T  45727057 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactct 45726959  T
Q  149 aatttctac 157  Q
    |||||||||    
T  45726958 aatttctac 45726950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 42362472 - 42362311
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||||||||||    
T  42362472 atctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 42362374  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    | | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  42362373 cccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 42362311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 1631772 - 1631879
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || |||||||| |||||||||||||||| |||||||||||||||||  | |||||| | ||||  |||||||| ||  || ||||||| |||    
T  1631772 agagattgatttctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaatcct 1631870  T
Q  149 aatttctac 157  Q
    |||||||||    
T  1631871 aatttctac 1631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 2334458 - 2334608
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||| | ||||||  ||||||||  |  || ||||||| |||    
T  2334458 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaaccct 2334556  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
     |||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  2334557 tatttctacccattttcccaatct-caccaatgaacaagacactcaatgattt 2334608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 6595046 - 6595153
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||| ||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  6595046 agagattgatctctccaatccactatcaacgagttc-ttacaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 6595144  T
Q  149 aatttctac 157  Q
    |||||||||    
T  6595145 aatttctac 6595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 33162490 - 33162597
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| |||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  33162490 agagattgatctctctaatccactatcaatgagttc-ttacagagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 33162588  T
Q  149 aatttctac 157  Q
    |||||||||    
T  33162589 aatttctac 33162597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 35446932 - 35447031
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||||||||||    
T  35446932 atctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaacaaccctaatttcta 35447030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 29867997 - 29867828
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  29867997 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 29867899  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  29867898 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 29867828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 34139810 - 34139980
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||||||   |||| |||||| |  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  34139810 agagattgatctctccaatccactatcaatgagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaacaaccct 34139909  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||||||||||  |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  34139910 aatttctacccattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgttt 34139980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 36773690 - 36773521
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  36773690 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 36773592  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||| | | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36773591 aatttattcccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36773521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 4484370 - 4484487
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||||||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  4484370 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 4484469  T
Q  149 aatttctactcttttctc 166  Q
    ||||||||| ||||||||    
T  4484470 aatttctacccttttctc 4484487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 30833474 - 30833357
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||||||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  30833474 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccct 30833375  T
Q  149 aatttctactcttttctc 166  Q
    ||||||||| ||||||||    
T  30833374 aatttctacccttttctc 30833357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 73 - 200
Target Start/End: Original strand, 7597074 - 7597202
Alignment:
Q  73 atcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatct 171  Q
    |||||||||||||||||||| ||||||||||   |||||| |||||| |||| ||||  |   |  ||||||| ||||||||||| || |||||||||||    
T  7597074 atcaatgagttctttacaaaaagatacaaaagacttacaagaaattagtttcgacaagttcataaggaacaaaacctaatttctattcatttctcaatct 7597173  T
Q  172 cctcccataaacaagagactcaatgattt 200  Q
    | |||||| ||||||| ||| | ||||||    
T  7597174 cttcccatgaacaagacactgagtgattt 7597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 41446260 - 41446160
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||| |||||| ||||  ||||||||| |||||||||||||| | ||||   ||||||  |||||||| || ||| ||||||||| |||||||||    
T  41446260 atctctccacttcactgtcaaccagttctttataaagagatacaaaagggttacttaaaattagcttcaacaagctctcaaagaacaaacataatttcta 41446161  T
Q  157 c 157  Q
    |    
T  41446160 c 41446160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 42288150 - 42288257
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || |||||||||| |||| ||||||| |||||||  | |||||||||||||  |||||||| ||  || ||||||| | |    
T  42288150 agagattgatctctccaatccattatcaatgagctctt-acaaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaacctt 42288248  T
Q  149 aatttctac 157  Q
    |||||||||    
T  42288249 aatttctac 42288257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 4503173 - 4503323
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  4503173 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccct 4503270  T
Q  149 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  | ||||| |||||| |||| || ||||||| ||||||||||||    
T  4503271 aatttctaccattttttcccaatct-ctccaatgaacaagacactcaatgattt 4503323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 11151639 - 11151800
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| ||||||| | |||||||| |||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||| ||||||||||    
T  11151639 atctctccaatccactatctaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatctaatttcta 11151737  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    | | ||||| |||| | | || || ||||||||||||||||| |||||||| ||||| ||||||    
T  11151738 cccattttcccaat-ttcaccaatgaacaagagactcaatgattttcactcacccaaggtgttt 11151800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 11690621 - 11690460
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| ||||||||| || ||||| |||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||||||||||    
T  11690621 atctctccaatccactatcaacgatttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 11690523  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    | | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  11690522 cccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 11690460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 42261749 - 42261817
Alignment:
Q  141 acaaacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 206  Q
    |||||||||||||||||  ||||||||||||||| |   ||| ||||||||||||||||| ||||||||    
T  42261749 acaaacctaatttctacgattttctcaatctccttctttcatgaacaagagactcaatgagttcactcg 42261817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 205
Target Start/End: Complemental strand, 28672059 - 28671902
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 147  Q
    ||||||| ||||||||||| |||| ||| ||||||||||  |||||||||||||| | | |||| ||||||   | |||||  |||   | ||| |||||    
T  28672059 agagattgatctctccaatccactgtcagtgagttctttgtaaagagatacaaaacggtaacaagaaattaaccttaacaagttatataaaaacaaaacc 28671960  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 205  Q
    ||||||||||  ||||  |||| || |||||  ||||||||||||||| |||||||||    
T  28671959 taatttctacaatttttccaatatcttcccaagaacaagagactcaataatttcactc 28671902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 14633865 - 14633973
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||| ||||||||||   |||| ||||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  14633865 agagattgatctctccaatccactatctatgagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaatcct 14633964  T
Q  149 aatttctac 157  Q
    |||||||||    
T  14633965 aatttctac 14633973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 17490188 - 17490267
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||| |||||||   |||||| ||||||  ||||||||    
T  17490188 agagattgatctctacaatccactatcaatgagttc-ttacaaagagttacaaaagagttacaagaaattagcttcaacaa 17490267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 41454355 - 41454255
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||   || | | ||||||  |||||||| || ||| | |||||| ||||||||||    
T  41454355 atctgtccacttcactatcaatgagttctttacaaatatatacaaaagagttgctagaaattagcttcaacaagctctcaaaaaacaaatctaatttcta 41454256  T
Q  157 c 157  Q
    |    
T  41454255 c 41454255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 32289692 - 32289577
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| |||| |||||||||||||||||   ||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  32289692 agagattgatctctctaatttactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccct 32289593  T
Q  149 aatttctactcttttc 164  Q
    ||||||||| ||||||    
T  32289592 aatttctacccttttc 32289577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 45099882 - 45099830
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||    
T  45099882 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaa 45099830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 5868474 - 5868428
Alignment:
Q  154 ctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||| ||||||| |||| |||| ||||||||||||||||||||||    
T  5868474 ctactcatttctcagtctcttcccttaaacaagagactcaatgattt 5868428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 34811279 - 34811341
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    |||||||||||||||||  ||||||||||||| ||||   |||||||||||||  ||||||||    
T  34811279 ttcactatcaatgagtttcttacaaagagatataaaagagttacaataaattagcttcaacaa 34811341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 4561199 - 4561110
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||| |||||| || |||||||||||||||||||   |||||| ||||||  ||||||||  | ||||| |  ||||||||||||||    
T  4561199 ttcactaacaatgaattttttacaaagagatacaaaaatgttacaagaaattagcttcaacaatatctcataaacaaaacctaatttcta 4561110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 7451246 - 7451194
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| |||||| |||| |||||||||||||||  |||||||||||||||||    
T  7451246 agagattgatctctgcaatccactatcaatgagtt-attacaaagagatacaaa 7451194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 9e-33; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 60 - 238
Target Start/End: Original strand, 26323124 - 26323303
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc 159  Q
    |||||| ||||||||||||||||| ||||| |||| |||||||| | |||||| ||||||  ||||||||||| |   | |||||||||||||| ||| |    
T  26323124 tctccacttcactatcaatgagttttttaccaagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttaccc 26323223  T
Q  160 ttttctcaatctcctcccataaacaagagactcaatgat-ttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||||||||| |||||| ||||||| ||| |||||| ||||||| | ||| |||||| ||| |||||||||||||||    
T  26323224 ttttctcaatctcatcccatgaacaagacacttaatgatgttcactcactcaaggtgtttcccaattgtttcccaactct 26323303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 40735511 - 40735361
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||  |||||||| ||  || ||||||| |||    
T  40735511 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaaccct 40735413  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  40735412 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 40735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 231
Target Start/End: Original strand, 35138765 - 35138928
Alignment:
Q  69 cactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaa 168  Q
    |||||||||||||||||||||||||||||||||||   || ||| ||||||  |||||||||||  |  ||||||||| |||||||||| | ||||||||    
T  35138765 cactatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttctcaa 35138864  T
Q  169 tctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcc 231  Q
    |||| | |||| ||||||| ||||||||| |||||||| ||||| ||||||  || ||||||||    
T  35138865 tctctttccatgaacaagacactcaatgattttcactctcccaaggtgtttcacaattgtttcc 35138928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 44700518 - 44700687
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  |||||||||||  || ||||||| |||    
T  44700518 agagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaaccct 44700616  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  44700617 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 44700687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 8166514 - 8166667
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    |||||||||||  |||||||||||||||||||||||| | ||| || | ||||  ||||||||||| ||  |||||||||||||||||||||| ||| ||    
T  8166514 ttcactatcaacaagttctttacaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacctaatttctactcatttatc 8166613  T
Q  167 aatctcctcccataaacaag--agactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||| || |||| ||||||  | ||||||||| |||||| | ||||||||||||    
T  8166614 aatct-cttccatgaacaagacacactcaatgattttcacccacccaatgtgttt 8166667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 202
Target Start/End: Complemental strand, 33191959 - 33191807
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 147  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||| ||  |||||| |||||| || |||  |||||||| || ||  ||||| ||||     
T  33191959 agagattgatctctctaatccactatcaatgagttctttacaaagacat--aaaatggttacaagaacttagcttcaacaagctctctaagaacaaaaca 33191862  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttca 202  Q
    || |||||||| ||||||||||||| | |||  ||||||||||||||| ||||||    
T  33191861 tagtttctactattttctcaatctcttaccaataacaagagactcaattatttca 33191807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 46860600 - 46860432
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 150  Q
    ||||| ||||||||||| ||||||||||||||| || |||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||||||||    
T  46860600 agattgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaa 46860502  T
Q  151 tttctactc-ttttctcaatctcctcccataaacaagagactcaatga--tttcactcgcccaatgtgttt 218  Q
    ||||||| | |||||||||||| | || || ||||||| ||||| |||  |||||||| ||||| ||||||    
T  46860501 tttctacccattttctcaatct-caccaatgaacaagacactcattgaattttcactctcccaaggtgttt 46860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 54593832 - 54593645
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | |||||||||||||  |||||||| ||  || ||||||| |||    
T  54593832 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccct 54593734  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    ||||||| | | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||||    
T  54593733 aatttctgcacattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaaggtg-tttacaattgtttcccaactct 54593645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 205
Target Start/End: Complemental strand, 2020250 - 2020121
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    |||| ||||||||||||||||||||||| |||||||| | ||| || ||||||  ||||||||         ||||||| |||| |||||| | ||||||    
T  2020250 ttcaatatcaatgagttctttacaaagaaatacaaaacggttataagaaattagcttcaacaa---------gaacaaatctaacttctacccatttctc 2020160  T
Q  167 aatctcctcccataaacaagagactcaatgatttcactc 205  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  2020159 aatctcttcccataaacaagagactcaatgaattcactc 2020121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 7762393 - 7762270
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| ||||||  ||||||||  |  || ||||||| |||    
T  7762393 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaaccct 7762295  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  7762294 aatttctaccctttttctcaatctc 7762270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 30236253 - 30236146
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  30236253 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaaccct 30236155  T
Q  149 aatttctac 157  Q
    |||||||||    
T  30236154 aatttctac 30236146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 40734626 - 40734457
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||| |||||| |||||| ||||||  |||||||| ||  || ||||||| ||    
T  40734626 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatac-aaatgtgttacaagaaattaggttcaacaagctcacaaagaacaaccc 40734529  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  40734528 taatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 40734457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 25491015 - 25491114
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |  || || |||| |  |||||||| || ||| |||||||||||||||||||    
T  25491015 atctctccacttcactatcaatgatttctttacaaagagatacaaaaggagtataagaaatcagcttcaacaagctctcaaagaacaaacctaatttcta 25491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 45095291 - 45095142
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  45095291 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 45095193  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  45095192 aatttctaccattttcccaatct-caccaatgaacaagacactcaatgattt 45095142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 1313852 - 1314014
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc-taatttct 155  Q
    ||||||| ||| || |||||||||||||||| |||||| |||||||| | || ||| ||||||  || ||||| || ||  |||||||| | |||||| |    
T  1313852 atctctctaatccaatatcaatgagttcttttcaaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataattttt 1313951  T
Q  156 actcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    || |||||||||||||| || ||  || |||||||||||| ||||||||| ||||| ||||||    
T  1313952 acccttttctcaatctcttctcaagaataagagactcaataatttcactcacccaaggtgttt 1314014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 49199509 - 49199617
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| ||||||  |||||||| ||  || ||||||| |     
T  49199509 agagattaatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacct 49199607  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  49199608 taatttctac 49199617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 6095639 - 6095762
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||| ||  |  || ||||||| |||    
T  6095639 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaacaaccct 6095737  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||||| ||||| |||||||    
T  6095738 aatttctactcattttcccaatctc 6095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 22835042 - 22835149
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  22835042 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 22835140  T
Q  149 aatttctac 157  Q
    |||||||||    
T  22835141 aatttctac 22835149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 34491340 - 34491233
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  34491340 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 34491242  T
Q  149 aatttctac 157  Q
    |||||||||    
T  34491241 aatttctac 34491233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 46173485 - 46173378
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  46173485 agagattgatctctccaatccactatcaatgaattctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 46173387  T
Q  149 aatttctac 157  Q
    |||||||||    
T  46173386 aatttctac 46173378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 7764592 - 7764478
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| ||||||  || |||||  |  || ||||||| |||    
T  7764592 agagattcatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaaccct 7764494  T
Q  149 aatttctactcttttc 164  Q
    ||||||||| ||||||    
T  7764493 aatttctacccttttc 7764478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 238
Target Start/End: Complemental strand, 20937762 - 20937596
Alignment:
Q  72 tatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac-tcttttctcaatc 170  Q
    |||||||||||||||| ||||||||||||||| | |||||| ||||||  |||||||| || ||  | ||||||| |||||||||| | ||||| | |||    
T  20937762 tatcaatgagttcttttcaaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctattttc-cgatc 20937664  T
Q  171 tcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    || | | || ||||||||||||||||||| |||||  | ||  ||||||||| || |||| |||||||    
T  20937663 tctttctatgaacaagagactcaatgattgcactcatctaagctgttttccaattatttctcaactct 20937596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 29682487 - 29682318
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | | |||| ||||||  || ||||| ||  || ||||||||| |    
T  29682487 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaacat 29682389  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | |  |||||||||| ||||||||| |||||||| ||||| ||||||    
T  29682388 aatttctacccattttcccaatct-cacaaataaacaagacactcaatgattttcactcacccaaggtgttt 29682318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 44331673 - 44331504
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  44331673 agagattgatctctccaatccactatcaataagttc-ttacaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaaccct 44331575  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | |||||  ||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  44331574 aatttctacccattttcctaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 44331504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 1683620 - 1683450
Alignment:
Q  31 aatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaa 130  Q
    |||||| ||||||||| ||||||   ||||||||| |||||||| ||||||||||||||||||||||  |||| |  ||||| ||||||   |||| ||     
T  1683620 aatgatctactatggggaagagag--atctctccacttcactataaatgagttctttacaaagagattaaaaacg-atacaagaaattagcatcaataag 1683524  T
Q  131 ctatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcact 204  Q
    || ||  ||||| ||| ||||||||||  ||||||||||||  | |||| |||||||||||| |||| ||||||    
T  1683523 ctctcgaagaacgaacttaatttctaccattttctcaatctatttccatgaacaagagactcgatgacttcact 1683450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 9581410 - 9581242
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | ||| || ||||||  || ||||| ||  || |||||||||||    
T  9581410 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacct 9581312  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||  |||| || |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  9581311 aatttctacccatttccgaatc-ccacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 9581242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 19683929 - 19683998
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  19683929 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 19683998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 5236498 - 5236665
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 150  Q
    ||||| ||||||| ||| || ||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||||    
T  5236498 agattgatctctcgaatccattatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaa 5236596  T
Q  151 tttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  5236597 tttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 5236665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 9636166 - 9636282
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| |||||||||||||||| ||||||| |||||||||| | |||||| |||||| |||  ||||  |  || ||||||| |||    
T  9636166 agagattgaactctccaatccactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaattagttttgacaagttcacaaagaacaaccct 9636264  T
Q  149 aatttctactcttttctc 166  Q
    ||||||||| ||||||||    
T  9636265 aatttctacccttttctc 9636282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 32891232 - 32891108
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 147  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||| ||||     
T  32891232 agagatttatctctccaatccactatcaacgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaact 32891134  T
Q  148 taatttctactc-ttttctcaatctc 172  Q
    |||||||||| | |||||||||||||    
T  32891133 taatttctacccattttctcaatctc 32891108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 43401841 - 43401949
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| || |||||||| |||||||||||||||| ||||||||||||| ||||||  |||||| ||||||  |||||||| ||  || ||||||| ||    
T  43401841 agagattaatttctccaatccactatcaatgagttc-ttacaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcacaaagaacaaccc 43401939  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  43401940 taatttctac 43401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 172
Target Start/End: Original strand, 54739004 - 54739116
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac-ctaatttctact 158  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||   |||| |||||||| ||||||||| ||  || ||||||||| |||||||||||     
T  54739004 tctccaatccactatcaatgagttctttacagagagatataaaagagttac-ataaattagtttcaacaagctcacaaagaacaaacactaatttctacc 54739102  T
Q  159 cttttctcaatctc 172  Q
     |||| ||||||||    
T  54739103 attttttcaatctc 54739116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 760975 - 760868
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||| ||||    
T  760975 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacagacct 760877  T
Q  149 aatttctac 157  Q
    |||||||||    
T  760876 aatttctac 760868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 29196426 - 29196596
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | || ||| ||||||  ||  |||| ||  || |||||||| ||    
T  29196426 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccc 29196524  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  29196525 taatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 29196596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 29810996 - 29810917
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  29810996 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 29810917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 31314565 - 31314404
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| ||||||||| |||||| ||||||| |||||||||  | |||||| ||||||  ||||||||  |  ||  |||||| |||||||||||    
T  31314565 atctctccaatccactatcaaagagttc-ttacaaaaagatacaaatgggttacaagaaattagcttcaacaagatcacaatgaacaaccctaatttcta 31314467  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    | | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31314466 cccattttctcaatct-cacctatgaacaagacactcaatgattttcactcacccaaagtgttt 31314404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 23197979 - 23198048
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | |||||||||||||||||||||||||| ||||||| |||||||||| | |||||| ||||||    
T  23197979 agagattgaactctccaattcactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaatta 23198048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 23200178 - 23200247
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | |||||||||||||||||||||||||| ||||||| |||||||||| | |||||| ||||||    
T  23200178 agagattgaactctccaattcactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaatta 23200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 23391949 - 23392058
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    |||||||||||||| |||| ||||||||| |||||| || ||||| ||||||||  | |||||| ||||||| || ||||| ||  || ||||||||| |    
T  23391949 agagatttatctctacaatccactatcaaagagttc-ttgcaaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaactt 23392047  T
Q  149 aatttctactc 159  Q
    |||||||||||    
T  23392048 aatttctactc 23392058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 24635368 - 24635278
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    |||||||||||||| ||  ||| |||||||||||||||  |||||| ||||||  ||||||||||| ||  ||||||||| ||||||||||    
T  24635368 ttcactatcaatgaattgattataaagagatacaaaatagttacaaaaaattagcttcaacaaactctccaagaacaaacttaatttctac 24635278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 37408586 - 37408517
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  37408586 agagattgatctcttcaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 37408517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 236
Target Start/End: Original strand, 43403784 - 43403970
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| || |||  |||||| |||| |  |||||||| ||  || ||||||| ||    
T  43403784 agagattaatctctccaatccactatcaatgagttc-ttacaaagagataaaacatgagttacaagaaatgagcttcaacaagctcacaaagaacaagcc 43403882  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaact 236  Q
    |||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| ||| ||| || |||||||||||||    
T  43403883 taatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaaagtg-tttacaattgtttcccaact 43403970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 4570080 - 4570028
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  4570080 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 4570028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 29813191 - 29813084
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||||||||| ||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  29813191 agagattgatctctccaatccactataaatgagttc-ttacaaagagatgcaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 29813093  T
Q  149 aatttctac 157  Q
    |||||||||    
T  29813092 aatttctac 29813084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 40519258 - 40519317
Alignment:
Q  70 actatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaa 130  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||||  |||||||||    
T  40519258 actatcaatgagttctttacaaagagatacaaaat-attacaagaaattaacttcaacaaa 40519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 47304379 - 47304256
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||| |||||||||| |  | |||||| | ||||  |||||||| ||  || ||||||| | |    
T  47304379 agagattgatctctccaatccactatcaatgagttc-ttacgaagagatacagatgggttacaagatattaacttcaacaagctcacaaagaacaaccat 47304281  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  47304280 aatttctacccattttctcaatctc 47304256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 55301981 - 55302064
Alignment:
Q  18 agttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||| |||||| |||||  ||||||||   ||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||    
T  55301981 agttcggtccaacaatgacctactatggaggagagattgatctctccaatccactatcaatgaattc-ttacaaagagatacaaa 55302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 200
Target Start/End: Original strand, 3148038 - 3148181
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    |||||| || ||||| ||||||||| |  ||||||| | |||||| | | |||||| ||||||  |||||||| || |   |||| ||||||||||||||    
T  3148038 atctctgcacttcacaatcaatgagattcttacaaacaaatacaataaggttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttcta 3148137  T
Q  157 ctcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
      | |||||||||||| ||||| |||||| ||||||||| ||||    
T  3148138 tccatttctcaatctcttcccacaaacaaaagactcaattattt 3148181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 5258183 - 5258253
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    |||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  5258183 aagagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 5258253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 5260362 - 5260432
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    |||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  5260362 aagagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 5260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 163
Target Start/End: Complemental strand, 5373353 - 5373247
Alignment:
Q  58 tctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttcta 156  Q
    |||||||||| || |  |||||||||| ||||||||||||| |||| | |||||||||||||  |||||||| ||   | |||||||| |||||||||||    
T  5373353 tctctccaatccattggcaatgagttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttcta 5373254  T
Q  157 ctctttt 163  Q
    | |||||    
T  5373253 ccctttt 5373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 36018980 - 36018876
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| | ||||||||| |||||| ||||||||||| ||||||||||||||||||  |||||| ||||||  |||||||| ||  || ||||||| ||    
T  36018980 agagattgacctctccaatccactat-aatgagttctt-acaaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaagaacaaccc 36018883  T
Q  148 taatttc 154  Q
    |||||||    
T  36018882 taatttc 36018876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 4055811 - 4055943
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaa-tgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct 155  Q
    |||||| |||| |||||||||||||||  ||||||||||||||||||  | |||||| ||||||  ||  ||||  | ||  ||||| ||||||||||||    
T  4055811 atctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaaattaacttttacaagttctccaagaac-aacctaatttct 4055909  T
Q  156 actcttttctcaatctcctcccataaacaagaga 189  Q
    || | |||| ||||||| |||||| |||||||||    
T  4055910 acccatttcccaatctcttcccatgaacaagaga 4055943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 16499157 - 16499109
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagata 98  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  16499157 agagattgatctctccaatccactatcaatgagttc-ttacaaagagata 16499109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 40913421 - 40913369
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||    
T  40913421 agagattgatctctccaatccactatcgatgagttc-ttacaaagagatacaaa 40913369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 51398934 - 51398890
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  51398934 atctctccaatccactatcaatgagttc-ttacaaagagatacaaa 51398890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 53921543 - 53921650
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||  ||||||||    |||||| ||||||  || ||||| ||  || | |||||||||    
T  53921543 agagattgatctctccaatccactatcaatgagttc-ttacaaaatgatacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaacct 53921641  T
Q  149 aatttctac 157  Q
    |||||||||    
T  53921642 aatttctac 53921650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 7780044 - 7780166
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||||||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  ||  |||||| |||    
T  7780044 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-ggttacaagaaattagatttgacaagttcacaatgaacaaccct 7780142  T
Q  149 aatttctactcttttctcaatctc 172  Q
    ||||||||| |||||| |||||||    
T  7780143 aatttctacccttttcccaatctc 7780166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 238
Target Start/End: Complemental strand, 39127653 - 39127486
Alignment:
Q  72 tatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatct 171  Q
    |||||||||||| ||||| || ||||||||||    || || ||||||  |||||||| ||  |  ||||||||| |||||| ||||  |||||||||||    
T  39127653 tatcaatgagttatttacgaaaagatacaaaaaaactataagaaattagcttcaacaagctcaccaagaacaaacataatttatacttatttctcaatct 39127554  T
Q  172 cctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    | || ||| || ||||  |||||||| ||||||||  |||| || ||||||| |||||||| ||||||    
T  39127553 cttctcatgaataagacgctcaatgattttcactcttccaaggtattttccaattgtttccaaactct 39127486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 801210 - 801166
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||||| ||||||||||||||||||   ||||||||||||||    
T  801210 ctctccaatccactatcaatgagttcttacaaaagagatacaaaa 801166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 5434154 - 5434186
Alignment:
Q  240 aggatcttctcttttggttacccaagactcacc 272  Q
    ||||||||||||||||||| |||||||||||||    
T  5434154 aggatcttctcttttggtttcccaagactcacc 5434186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 41819563 - 41819617
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    ||||||| || |||||||| |||||| ||||||||||| ||||||||||||||||||    
T  41819563 agagattgatgtctccaatccactat-aatgagttctt-acaaagagatacaaaatg 41819617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 50432733 - 50432849
Alignment:
Q  89 caaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc-aatctcctcccataaacaaga 187  Q
    |||||||||||||||  ||| ||| ||||||  |||||||  || ||  ||| || ||||||||||||| |||||| | |||||| |||  | | |||||    
T  50432733 caaagagatacaaaagatttgcaagaaattaacttcaacacgctctccaagagcagacctaatttctacccttttcccgaatctcatcctgtgaccaaga 50432832  T
Q  188 gactcaatgatttcact 204  Q
    |||||||||||||||||    
T  50432833 gactcaatgatttcact 50432849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 54744304 - 54744357
Alignment:
Q  64 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    |||| |||||||| | ||||||||||||||||||||||||   |||||||||||||    
T  54744304 caatccactatcagtaagttctttacaaagagatacaaaa--gttacaataaatta 54744357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 32902213 - 32902369
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||   |||||| ||||||  ||||||| | | ||   |||||||| |    
T  32902213 agagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaacagagtctccatgaacaaacat 32902312  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 205  Q
    ||||||||| | ||| ||||||||||| ||| | |||||||||||||||||||||||    
T  32902313 aatttctacccatttatcaatctcctctcatgatcaagagactcaatgatttcactc 32902369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 199
Target Start/End: Complemental strand, 7597786 - 7597592
Alignment:
Q  6 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 105  Q
    |||||||||  |||||| ||| || |||||  |||||||||  ||||||| ||||||||||| |||||||||||  |||||||||||||||||||||| |    
T  7597786 aaatatttatccagttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagagatacaaaagg 7597687  T
Q  106 tttacaataaattattttcaacaaactatcatagaac-aaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatt 199  Q
     ||| || ||||||  |||||||| || ||  ||||| |||||| |||| | |||||||  ||||||| |||||  ||||| |||||||||||||    
T  7597686 attataagaaattagcttcaacaagctctccaagaacaaaacctgatttattctctttttccaatctcttcccaagaacaaaagactcaatgatt 7597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 11712040 - 11712197
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 147  Q
    ||||||| |||||| |||| ||||||||||||||| |||||||||||||| |||| | || ||| ||||||  |||||||| || |||  |||| |||||    
T  11712040 agagattgatctcttcaatccactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacc 11712139  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 205  Q
    |||||| || | ||||||||||||| ||| |  ||||| |||||||||||||||||||    
T  11712140 taatttatattattttctcaatctcttccaaagaacaaaagactcaatgatttcactc 11712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 218
Target Start/End: Original strand, 3231859 - 3232005
Alignment:
Q  73 atcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatct 171  Q
    |||||| |||||||||||||||||||||||||| ||| || ||||||  |||||||| ||  |  |||||||| ||||||||||||  ||||||||||||    
T  3231859 atcaataagttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatct 3231958  T
Q  172 cctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    | ||| |  ||||||||||||||||| ||||| | ||||| ||||||    
T  3231959 cttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 3232005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 40328908 - 40328800
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||| |||||| ||| ||||| ||  || ||||||||||    
T  40328908 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaacc 40328810  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  40328809 taatttctac 40328800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 8965731 - 8965900
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 147  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||| |||| | ||| || ||||||  |||||||||||   | |||||||| ||    
T  8965731 agagatttatctctccgatgcactatcaatgagttc-ttacaaagagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccc 8965829  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||||  ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  8965830 taatttctacctttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 8965900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 30143468 - 30143361
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  30143468 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 30143370  T
Q  149 aatttctac 157  Q
    |||||||||    
T  30143369 aatttctac 30143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 40221873 - 40221766
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| |||||| ||||||||| ||  || ||||||| |||    
T  40221873 agagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccct 40221775  T
Q  149 aatttctac 157  Q
    |||||||||    
T  40221774 aatttctac 40221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 4731778 - 4731617
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||| ||| |||||||||||    
T  4731778 atctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaaccctaatttcta 4731680  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  4731679 cccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 4731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 18141948 - 18141780
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||| ||||||||  | |||||| ||||||  |||||||| ||  || ||||| |||||    
T  18141948 agagattgatctctccaatccactatcaaagagttc-ttacaaagtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aacct 18141851  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||||||||| ||||||    
T  18141850 aatttctacccattttcacaatct-caccaatgaacaagacactcaatgattttcactcgcccaaggtgttt 18141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 27811406 - 27811237
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||||| |||| ||||||||||| |||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  27811406 agagattgatctcttcaatccactatcaatgggttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 27811308  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  27811307 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 27811237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 34254371 - 34254520
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  34254371 agagattgatctctccaatccactatcaataagttc-ttacaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccct 34254469  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| |||||| |||||| | || || ||||||| ||||||||||||    
T  34254470 aatttctacccttttcccaatct-caccaatgaacaagacactcaatgattt 34254520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 43036551 - 43036382
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||    |||||| |||||| |||||||||  |  || ||||||| |||    
T  43036551 agagattgatctctcaaatccactatcaatgagttc-ttacaaagagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaaccct 43036453  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  43036452 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 43036382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 211
Target Start/End: Original strand, 19491728 - 19491900
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcat 137  Q
    |||||||||  ||| ||| ||||||  ||| ||||||||| |||||||| |||||||||||||||  | |||||| |||||| ||||||||| ||  ||     
T  19491728 tactatgggggagatattgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 19491826  T
Q  138 agaacaaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaa 211  Q
    |||||||||||||||||||| | ||||| |||||| | || || ||||||| |||||||  |||||||| |||||    
T  19491827 agaacaaacctaatttctacccattttcccaatct-caccaatgaacaagacactcaatattttcactcacccaa 19491900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 29796314 - 29796524
Alignment:
Q  3 caaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttcttt-acaaagagatacaa 101  Q
    ||||||| |||||  ||||| |||||| |||||  |||  ||||  ||||||| ||||||||||| || ||| |||||||| ||| ||||| || |||||    
T  29796314 caaaaatgtttaccaagttcggtccaacaatgacctacattgggggagagattgatctctccaatccattataaatgagtttttttacaaataggtacaa 29796413  T
Q  102 aatgtttacaataaattattttcaacaaactatcatagaacaaaccta-atttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||   |||||| |||| |  ||||||||  | ||  |||||||||||  ||||||||||||||| ||||||| || ||  ||||||||||||||||| ||    
T  29796414 aaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctcttctcaagaacaagagactcaatgaatt 29796513  T
Q  201 cactcgcccaa 211  Q
    |||||||||||    
T  29796514 cactcgcccaa 29796524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 42498322 - 42498171
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  42498322 agagattgatctctccaatccactatcaatgagttc-ttacaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 42498224  T
Q  149 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  | ||||| |||||| | || || ||||||| ||||||||||||    
T  42498223 aatttctacctttttttcccaatct-caccaatgaacaagacactcaatgattt 42498171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 10240263 - 10240139
Alignment:
Q  69 cactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttt-tctc 166  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||| ||||||  |||||||| ||  || |||||||| || |||||||| ||||| || |    
T  10240263 cactatcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttcta-tctttgtccc 10240165  T
Q  167 aatctcctcccataaacaagagactc 192  Q
    ||||||||||||  ||||||||||||    
T  10240164 aatctcctcccaagaacaagagactc 10240139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 211
Target Start/End: Complemental strand, 41267080 - 41266935
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttct 165  Q
    |||||||||||  ||||||||| ||||| ||||||||   |||||| |||||| | |||||||  | ||  |||||||| ||||||||||||  ||||||    
T  41267080 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttct 41266981  T
Q  166 caatctcctcccataaacaagagactcaatgatttcactcgcccaa 211  Q
    ||| ||| ||| |  ||||||||||||||||||||||||| |||||    
T  41266980 caaactcttcctaagaacaagagactcaatgatttcactcacccaa 41266935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 1292503 - 1292626
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    |||||||||| |||| ||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||||| |    
T  1292503 agagatttatttctcaaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaactt 1292601  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  1292602 aatttctacccattttctcaatctc 1292626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 3303710 - 3303860
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  || ||||| ||  || ||||||||| |    
T  3303710 agagattgatctcttcaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaactt 3303808  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | ||||| |||||| | || |||||||||| ||||||||||||    
T  3303809 aatttctacccattttcccaatct-caccaataaacaagatactcaatgattt 3303860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 18655528 - 18655405
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  18655528 agagattgatctctctaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacctt 18655430  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  18655429 aatttctacccattttctcaatctc 18655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 33352278 - 33352128
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  33352278 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaaccct 33352180  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||| ||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  33352179 aatttttacccattttcccaatct-caccaatgaacaagacactcaatgattt 33352128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 42435031 - 42435138
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || |||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  42435031 agagattgatttctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 42435129  T
Q  149 aatttctac 157  Q
    |||||||||    
T  42435130 aatttctac 42435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 4283651 - 4283545
Alignment:
Q  50 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 149  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || | ||||| ||||    
T  4283651 gagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaacccta 4283553  T
Q  150 atttctac 157  Q
    ||||||||    
T  4283552 atttctac 4283545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 15212914 - 15212745
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  15212914 agagattgatctctccaatccattatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 15212816  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| | ||||||| |||||||| ||||| ||||||    
T  15212815 aatttctacccattttcccaatct-caccaatgaacaagacattcaatgattttcactcacccaaggtgttt 15212745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 34256547 - 34256696
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  34256547 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccct 34256645  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||  ||||  |||||| | || || ||||||| ||||||||||||    
T  34256646 aatttctaccatttttccaatct-caccaatgaacaagacactcaatgattt 34256696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 163
Target Start/End: Original strand, 12702674 - 12702787
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||||||| |||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  12702674 agagattgatctctccaatccaatatcaatgagttc-ttacaaagagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 12702772  T
Q  149 aatttctactctttt 163  Q
    ||||||||| |||||    
T  12702773 aatttctaccctttt 12702787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 40585822 - 40585686
Alignment:
Q  70 actatcaatgagttcttt-acaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct-actcttttctca 167  Q
    |||||||||||||||||| ||||| |||||||||| | |||||| |||||  ||||||||| ||  || |||| ||| || | |||| |||| ||| |||    
T  40585822 actatcaatgagttcttttacaaaaagatacaaaaggcttacaaaaaattcgtttcaacaagctcaca-agaataaaacttaattcttactcatttttca 40585724  T
Q  168 atctcctcccataaacaagagactcaatgatttcactc 205  Q
    || || || |||||||||||||||||||||||||||||    
T  40585723 atttcttctcataaacaagagactcaatgatttcactc 40585686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 1822421 - 1822313
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc- 147  Q
    ||||||| |||||||||||||||||| | |||||| |||||||| ||||| |||| | |||||| ||||||  |||||||| ||  || ||||||||||     
T  1822421 agagattgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacca 1822322  T
Q  148 taatttcta 156  Q
    |||||||||    
T  1822321 taatttcta 1822313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 156
Target Start/End: Complemental strand, 1856866 - 1856758
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc- 147  Q
    ||||||| |||||||||||||||||| | |||||| |||||||| ||||| |||| | |||||| ||||||  |||||||| ||  || ||||||||||     
T  1856866 agagattgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacca 1856767  T
Q  148 taatttcta 156  Q
    |||||||||    
T  1856766 taatttcta 1856758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 40321208 - 40321058
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||  | |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  40321208 agagattgatctctccaatccactatcaaagagtt-tttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaatgaacaaccct 40321110  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  40321109 aatttctacccattttcccaatct-cacctatgaacaagacactcaatgattt 40321058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 238
Target Start/End: Complemental strand, 44353921 - 44353733
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| |||| | |||| |||||||||||||||| |||||||||||||| |||||| |||||| ||||||  ||||||||  |  || ||||||| ||    
T  44353921 agagattgatcttttcaatccactatcaatgagttc-ttacaaagagatac-aaatgtgttacaagaaattagcttcaacaagttcacaaagaacaaccc 44353824  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    |||||||||| | ||||| |||||| | |  || ||||||| ||||||||| ||| |||| ||||||||| ||| || |||||||||||||||    
T  44353823 taatttctacccattttcccaatct-cacaaatgaacaagatactcaatgatttttactcacccaatgtg-tttacaattgtttcccaactct 44353733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 5689399 - 5689330
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  5689399 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 5689330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 7444930 - 7445008
Alignment:
Q  122 ttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||| ||||  ||||||||| |||||||||||   |||||||||||| |||||| |||||||||||||| |||||    
T  7444930 ttcaacaagctatattagaacaaatctaatttctaccaatttctcaatctcttcccatgaacaagagactcaaagattt 7445008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 30291735 - 30291584
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 147  Q
    ||||||| ||||||||||| ||||||||| || ||| |||||||| ||||||||    |||||| ||||||  |||||||| ||  || ||||| |||||    
T  30291735 agagattgatctctccaatccactatcaaagaattc-ttacaaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacc 30291637  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    |||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  30291636 taatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 30291584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 1345411 - 1345518
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | |||| |||| ||||||||||||||||||| |||||||||||| |  | |||||| ||||||  ||||| |||||  || ||||||| |||    
T  1345411 agagattgaactcttcaatccactatcaatgagttcttt-caaagagatacatatgggttacaagaaattagcttcaataaactcacaaagaacaaccct 1345509  T
Q  149 aatttctac 157  Q
    |||||||||    
T  1345510 aatttctac 1345518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 41366654 - 41366777
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||||| ||||||||  | ||| || ||||||  || ||||| ||  || ||||||||| |    
T  41366654 agagattgatctctccaatccactataaatgagttc-ttacaaagggatacaaataggttaaaagaaattagcttaaacaagcttacaaagaacaaacat 41366752  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||||| | |||||||||||||    
T  41366753 aatttctacccattttctcaatctc 41366777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 1746259 - 1746327
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||||||||||||| | |||||| ||||||    
T  1746259 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaagggttacaagaaatta 1746327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 17982781 - 17982712
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  17982781 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 17982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 44303983 - 44303914
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| ||| |||||||||||||| | |||||| ||||||    
T  44303983 agagattgaactctccaatccactatcaatgagttc-ttaaaaagagatacaaaaggattacaagaaatta 44303914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 11384102 - 11384006
Alignment:
Q  60 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    |||||||| || |||||||| |||||| |||||||||||||||    |||||| ||||||  |||||||||||  || ||||||| ||||||||||||    
T  11384102 tctccaatccagtatcaatgggttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctac 11384006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 238
Target Start/End: Original strand, 33655361 - 33655532
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactct-tttc 164  Q
    |||||||| ||||| |||||| |||||||||| ||||  |||||| | |||| |  ||||||||||| ||  |||||||| |||||||||| ||| ||||    
T  33655361 ttcactattaatgaattcttttcaaagagataaaaaaaagtttacgagaaatcagcttcaacaaactctctaagaacaaatctaatttcta-tctatttc 33655459  T
Q  165 tcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    | ||| | || |||| ||||||| |||||||||||||||||  ||||  ||||||| | || ||| ||||||||    
T  33655460 ttaatat-cttccatgaacaagacactcaatgatttcactcatccaagatgttttcaaattattttccaactct 33655532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 4162624 - 4162518
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| || |||||||| | |||||||||||||||| |||||||||||||||    |||||| ||||||  ||||||||  | ||| |||||||||||    
T  4162624 agagattgatatctccaatcc-ctatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacct 4162527  T
Q  149 aatttctac 157  Q
    || ||||||    
T  4162526 aacttctac 4162518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 9765863 - 9765804
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  9765863 ctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 9765804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 157
Target Start/End: Complemental strand, 30909487 - 30909389
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||  | |||||| |||||| ||| ||||| || ||  |||  ||||||||||||||    
T  30909487 atctctccaattcactatcaacgag-tcattacaaagagatacaaagag-ttacaagaaattagtttaaacaagctctccaagagtaaacctaatttcta 30909390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 8153887 - 8153833
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    |||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||    
T  8153887 aagagattgatctctccaatcaactatcaatgagttc-ttacaaagatatacaaaa 8153833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 84
Target Start/End: Complemental strand, 10015208 - 10015173
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttc 84  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10015208 agagatttatctctccaatccactatcaatgagttc 10015173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 10930239 - 10930345
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||| |||| ||||||||||||| |||  | |||||| ||||||  |||||| | ||  || ||| ||| |||    
T  10930239 agagattgatctctccaatccactatcaatgtgttc-ttacaaagagatataaatgggttacaagaaattagcttcaacgagctcacaaagagcaaccct 10930337  T
Q  149 aatttcta 156  Q
    ||||||||    
T  10930338 aatttcta 10930345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 19945399 - 19945469
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa-tgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| || |||||| ||||||    
T  19945399 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagtggttacaagaaatta 19945469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 3073913 - 3073966
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||||||||||||    
T  3073913 agagattgatctctccaagccattatcaatgagttc-ttacaaagagatacaaaa 3073966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 10929914 - 10929865
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaa 101  Q
    |||||| |||||||||| |||||||||||||||| |||||||||| |||||    
T  10929914 agatttctctctccaatccactatcaatgagttc-ttacaaagagttacaa 10929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 11137146 - 11137074
Alignment:
Q  60 tctccaattcactatcaatgag---ttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||||||||||||||||||   || ||||||||||||||||||| | ||| || ||||||  ||||||||    
T  11137146 tctccaattcactatcaatgagtttttttttacaaagagatacaaaacggttataagaaattagcttcaacaa 11137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 31218385 - 31218316
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||| ||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  31218385 agagattgaactctctaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 31218316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 4743254 - 4743291
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctt 86  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  4743254 agagattgatctctccaatccactatcaatgagttctt 4743291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 6599100 - 6598993
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||   |||||||  | |||||| ||||||  || ||||| ||  || ||||||||| |    
T  6599100 agagattgatctctctaatccactatcaatgagttc-ttacaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaactt 6599002  T
Q  149 aatttctac 157  Q
    |||||||||    
T  6599001 aatttctac 6598993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 6674553 - 6674446
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||   |||||||  | |||||| ||||||  || ||||| ||  || ||||||||| |    
T  6674553 agagattgatctctctaatccactatcaatgagttc-ttacaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaactt 6674455  T
Q  149 aatttctac 157  Q
    |||||||||    
T  6674454 aatttctac 6674446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 40873765 - 40873729
Alignment:
Q  65 aattcactatcaatgagttctttacaaagagatacaa 101  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  40873765 aattcactatcaaagagttctttacaaagagttacaa 40873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 27457 - 27652
Alignment:
Q  24 gtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattatttt 123  Q
    |||||| |||||  |||||||||  ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||    |||||| ||||||  ||    
T  27457 gtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaagagatacaaatgagttacaagaaattagctt 27556  T
Q  124 caacaaactatcatagaacaa-acctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    |||||| || |   ||||||| || ||||||||||||||||| ||||||| ||||   |||||||||||||| ||||||||||  |||| ||||||    
T  27557 caacaagctcttcaagaacaatacataatttctactcttttcacaatctcttccctagaacaagagactcaaagatttcactcatccaaggtgttt 27652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 44 - 206
Target Start/End: Original strand, 490355 - 490520
Alignment:
Q  44 gggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaaca 143  Q
    |||| ||||| | ||||||||  |||||||||||||||| ||||||||||| ||||||||   |||||| ||||||  |||||||| || ||  ||||||    
T  490355 gggagagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaaca 490454  T
Q  144 aacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 206  Q
    ||| ||||||||||  |||||||||||||||||   ||| ||||||||||||||||| ||||||||    
T  490455 aacttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatgagttcactcg 490520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 434661 - 434592
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  434661 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 434592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 490584 - 490652
Alignment:
Q  141 acaaacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 206  Q
    |||||||||||||||||  ||||||||||||||| |   ||| ||||||||||||||||| ||||||||    
T  490584 acaaacctaatttctacgattttctcaatctccttctttcatgaacaagagactcaatgagttcactcg 490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 218
Target Start/End: Complemental strand, 25174 - 25012
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| | |||||| ||||||  ||||||||||| ||| |||||||| ||| ||||||    
T  25174 atctctctacttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaaactagtttcta 25075  T
Q  157 ctcttttctc-aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    |  ||||| | |||||  ||   | | ||| ||||||||||||||||||| ||||| ||||||    
T  25074 ccattttcccgaatcttgtcatgtgatcaacagactcaatgatttcactctcccaaggtgttt 25012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 187
Target Start/End: Complemental strand, 22079437 - 22079307
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| |||||| ||||||  || ||||| ||  || ||||||||| |||||||||    
T  22079437 atctctccaatccaatatcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttcta 22079338  T
Q  157 ctcttttctcaatctcctcccataaacaaga 187  Q
    |  ||||  ||||||| |||||| |||||||    
T  22079337 ccatttttccaatctcttcccatgaacaaga 22079307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 9109458 - 9109611
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||| ||||||||||| ||||||||| | ||||||||||||||||||||||| | |||||| ||||||  ||||||||  | ||  || | ||||     
T  9109458 aagagattgatctctccaatacactatcaacgtgttctttacaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagtaaaaact 9109557  T
Q  148 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttc 201  Q
    |||||||| |  ||||||||||||||| |||| ||||||| |||||| ||||||    
T  9109558 taatttcttccattttctcaatctcctaccatgaacaagacactcaaggatttc 9109611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 49 - 219
Target Start/End: Complemental strand, 49918478 - 49918308
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  49918478 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 49918380  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgtttt 219  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| |||||||    
T  49918379 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgtttt 49918308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 3156993 - 3156843
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  3156993 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 3156895  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  3156894 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 3156843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 12318533 - 12318718
Alignment:
Q  18 agttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaat 117  Q
    ||||| ||||||||||||  |||||||||  |||||  | ||||| |  |||| ||||||||||||||| |  |||| |||||||||| |||||| ||||    
T  12318533 agttcggtccaataatgaactactatgggggagagagatctctctgc--ttcagtatcaatgagttcttaaagaagacatacaaaatggttacaagaaat 12318630  T
Q  118 tattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 205  Q
    ||  |||||||| || ||   ||||||||||||||||||| | ||||  ||||||  ||||| ||||||| |||||||||||||||||    
T  12318631 tagcttcaacaagctctccatgaacaaacctaatttctacccatttccaaatctctacccatgaacaagaaactcaatgatttcactc 12318718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 37033080 - 37033300
Alignment:
Q  17 cagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataa 115  Q
    |||||| ||||||  ||||  ||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||| | |||||| ||    
T  37033080 cagttcggtccaaccatgacctactatggagaagagattaatctctccaatccactatcaatgagttc-ttacaaagagatgcaaaatggattacaagaa 37033178  T
Q  116 attattttcaacaaactatcatagaacaaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatg 213  Q
    ||||  |||||||| ||  || ||||||| |||||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||| |    
T  37033179 attagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaagg 37033276  T
Q  214 tgttttccatttgtttcccaactct 238  Q
    || ||| || |||||||||||||||    
T  37033277 tg-tttacaattgtttcccaactct 37033300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 67 - 238
Target Start/End: Complemental strand, 41135931 - 41135760
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    |||| |||||| |||||||||||||| |||||||||| |||||||| ||||||  ||||| ||  | |   |||||||| ||||||||||| |||||       
T  41135931 ttcagtatcaacgagttctttacaaatagatacaaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatctaatttctaccctttttct 41135832  T
Q  167 aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttttccatttgtttcccaactct 238  Q
    | ||||||| ||  ||||||||||||||||||||| ||| ||||| ||||||| ||  |||||| |||||||    
T  41135831 attctcctcacaggaacaagagactcaatgatttccctcacccaaggtgtttttcaaatgtttctcaactct 41135760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 19754623 - 19754499
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  19754623 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaacaaccct 19754525  T
Q  149 aatttctactc--ttttctcaatctc 172  Q
    ||||||||| |  |||||||||||||    
T  19754524 aatttctacccatttttctcaatctc 19754499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 4535528 - 4535688
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||   |||||| |||||   ||||| || || ||  ||||||||| |||||||||    
T  4535528 atctctccacttaactatcaatgagttctttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaatttcta 4535627  T
Q  157 ctcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 218  Q
    |   || | ||||||| | |  | |||||||| |||||||||||||||| ||||||||||||    
T  4535628 ccaattccgcaatctcttactttgaacaagag-ctcaatgatttcactcacccaatgtgttt 4535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 7482270 - 7482378
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  7482270 agagattgatctctccaattcactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 7482368  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  7482369 taatttctac 7482378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 4552677 - 4552827
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||| ||||||||  | |||||| ||||||  |||||||| ||  || || ||||||||    
T  4552677 agagattgatctctccaatccattatcaatgagttc-ttacaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacct 4552775  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  4552776 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 4552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 19752822 - 19752707
Alignment:
Q  41 tatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcataga 140  Q
    ||||||| ||||||| ||||||||||| | |||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||    
T  19752822 tatgggagagagattgatctctccaatcctctatcaatgagttc-ttacaaagagatacaaatcggttacaagaaattagcttcaacaagctcgcaaaga 19752724  T
Q  141 acaaacctaatttctac 157  Q
    |||| ||||||||||||    
T  19752723 acaaccctaatttctac 19752707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 218
Target Start/End: Original strand, 44650201 - 44650372
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||| |||||| |||| |||||| ||||| || |||||||||||||| ||||  ||||||||||||||   | ||||||||  || ||||||||||    
T  44650201 aagagattgatctcttcaatccactattaatgaattatttacaaagagatataaaagatttacaataaattagcgttaacaaactcacaaagaacaaacc 44650300  T
Q  148 -taatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
     |||||| |||  |||||||||||| |||| || ||||||| ||||||| | |||||||| ||||| ||||||    
T  44650301 ataatttttacatttttctcaatct-ctccaatgaacaagacactcaataattttcactcacccaaagtgttt 44650372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 47255380 - 47255487
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  47255380 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 47255478  T
Q  149 aatttctac 157  Q
    |||||||||    
T  47255479 aatttctac 47255487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 6808582 - 6808479
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| || |||  |||||||| || ||  ||||||||||    
T  6808582 aagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacc 6808483  T
Q  148 taat 151  Q
    ||||    
T  6808482 taat 6808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 8550827 - 8550996
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||    |||||| ||||||  || ||||| ||  || |||||||||||    
T  8550827 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaacct 8550925  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||||||||||    
T  8550926 aatttctacccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaatgtgttt 8550996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 28265594 - 28265763
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  28265594 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccct 28265692  T
Q  149 aatttcta-ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||| || ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  28265693 aatttctacctattttcccaatct-cgccaatgaacaagacactcaatgattttcactcacccaaggtgttt 28265763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 211
Target Start/End: Complemental strand, 41361053 - 41360881
Alignment:
Q  38 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcat 137  Q
    |||||||||  ||| ||| ||||||  ||| ||||||||| |||||||| |||||||||||||||  | |||||| |||||| ||||||||| ||  ||     
T  41361053 tactatgggggagatattgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 41360955  T
Q  138 agaacaaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaa 211  Q
    |||||||||||||||||||| | ||||| |||||| | || || ||||||| |||||||  |||||||| |||||    
T  41360954 agaacaaacctaatttctacccattttcccaatct-caccaatgaacaagacactcaatattttcactcacccaa 41360881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 193740 - 193616
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||| ||||||||||| |||||||||||||||  |||||||||||||||||    |||||| ||||||  |||||||| |||  | ||||||| ||    
T  193740 aagagattgatctctccaatccactatcaatgagtt-attacaaagagatacaaatgagttacaagaaattagcttcaacaagctaataaagaacaaccc 193642  T
Q  148 taatttctactc-ttttctcaatctc 172  Q
    |||||||||| | |||||||||||||    
T  193641 taatttctacccattttctcaatctc 193616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 220
Target Start/End: Original strand, 28220266 - 28220437
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  28220266 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 28220364  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttttc 220  Q
    ||||||||| | |||||  ||||| | || || || |||| ||||||||| |||||||| ||||| ||||||||    
T  28220365 aatttctacccattttccgaatct-caccaatgaataagacactcaatgattttcactcacccaaggtgttttc 28220437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 37168426 - 37168318
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  37168426 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 37168328  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  37168327 taatttctac 37168318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 3460826 - 3460710
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac- 146  Q
    |||| ||| |||||||||||  |||||||||  |||||||||||||| |||||||| | |||||||||||||  |||||||| ||  || |||||||||     
T  3460826 aagatattgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaact 3460727  T
Q  147 ctaatttctactctttt 163  Q
    ||||||||||| |||||    
T  3460726 ctaatttctaccctttt 3460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 11348826 - 11348719
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  11348826 agagattgatctctccaatccactatcaatgagttc-ttagaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 11348728  T
Q  149 aatttctac 157  Q
    |||||||||    
T  11348727 aatttctac 11348719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 13547129 - 13547236
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||| ||  |||||||| ||  || ||||||| |||    
T  13547129 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaaccct 13547227  T
Q  149 aatttctac 157  Q
    |||||||||    
T  13547228 aatttctac 13547236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 37282731 - 37282811
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||| ||||| | |||| ||||||||  ||||||||    
T  37282731 agagatttatctctccaatccactactaatgagttctttacaaagagatgcaaaagggttaccataaattagcttcaacaa 37282811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 16914232 - 16914355
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaa-ttattttcaacaaactatcatagaacaaacctaatttctactcttttct 165  Q
    ||||||||||||||||||||||||||||||||||||| | ||| || ||| |||  |||||||  || ||  ||||||||| |||||| ||| | ||||     
T  16914232 ttcactatcaatgagttctttacaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataatttttacccatttcc 16914331  T
Q  166 caatctcctcccataaacaagaga 189  Q
    ||||||| |||||| |||||||||    
T  16914332 caatctcttcccatgaacaagaga 16914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 31659366 - 31659197
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||  |||    
T  31659366 agagattgatctctccaatccactatcaataagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacagccct 31659268  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31659267 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 31659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 44455288 - 44455119
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||    |||||| |||||| |||||||||  |  || ||||||| |||    
T  44455288 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaaccct 44455190  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaat-gatttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||| | |||||||| ||||| ||||||    
T  44455189 aatttctacccattttcccaatct-caccaatgaacaagacactcaatggttttcactcacccaaggtgttt 44455119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 50167215 - 50167384
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  | |||||| ||||||  ||  |||| ||  || | ||||| |||    
T  50167215 agagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaataacaaccct 50167313  T
Q  149 aatttctact-cttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||||  ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  50167314 aatttctactaattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 50167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 1050501 - 1050639
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    ||||||||||| ||||| |||||||||||| ||||||   |||||| ||||||  ||||| || || ||  |||||| |||||||||  || | |||| |    
T  1050501 ttcactatcaacgagttatttacaaagagacacaaaaatgttacaagaaattagcttcaataagctctcgaagaacacacctaattttcacccatttccc 1050600  T
Q  167 aatctcctcccataaacaagagactcaatgatttcactc 205  Q
    |||||| || ||| ||||||||||||||| |||||||||    
T  1050601 aatctcttcacatgaacaagagactcaataatttcactc 1050639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 16455759 - 16455670
Alignment:
Q  39 actatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||  | |||||| ||||||  ||||||||    
T  16455759 actatgggagagagattgatctctccaatccactatcaatgagttc-ttacacagagatacaaatgggttacaagaaattagcttcaacaa 16455670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 200
Target Start/End: Complemental strand, 20762800 - 20762649
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  20762800 agagattgatctctccaatccactatcaatgagttc-ttacgaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 20762702  T
Q  149 aatttcta--ctcttttctcaatctcctcccataaacaagagactcaatgattt 200  Q
    ||||||||  || |||||||||||| | || || ||||||| ||||||||||||    
T  20762701 aatttctacccttttttctcaatct-caccaatgaacaagatactcaatgattt 20762649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 3847155 - 3847330
Alignment:
Q  43 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac 142  Q
    |||| |||||||  ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| || |||  || ||||||||  || |||||    
T  3847155 tggggaagagatggatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaac 3847253  T
Q  143 aaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    || |||||||||||| | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  3847254 aaccctaatttctacccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 3847330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 153
Target Start/End: Complemental strand, 15820435 - 15820332
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    |||||||||||||| |||| |||||||||||||||| ||| |||||||||| |||||| |||||| ||||||  |||||||| ||  || ||||||||||    
T  15820435 agagatttatctcttcaatgcactatcaatgagttc-ttaaaaagagatac-aaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaacc 15820338  T
Q  148 taattt 153  Q
    ||||||    
T  15820337 taattt 15820332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 200
Target Start/End: Complemental strand, 25652197 - 25652064
Alignment:
Q  67 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 166  Q
    ||||||||||| ||||||||||||||||||||||| |   |||||| ||||||  ||||||||||| ||| | |||| || ||||||||||   ||||||    
T  25652197 ttcactatcaaagagttctttacaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctaccaatttctc 25652098  T
Q  167 aatctcctcccataaacaagagactcaatgattt 200  Q
    ||| |  || ||| ||||| | ||||||||||||    
T  25652097 aatattttctcatgaacaaaatactcaatgattt 25652064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 37503597 - 37503763
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||   | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  37503597 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaa---ggttacaagaaattagcttcaacaagttcacaaagaacaaccct 37503692  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||| ||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  37503693 aatttttacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 37503763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 47115300 - 47115192
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  47115300 agagattgatctctccaatccactatcaatgggtt-tttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 47115202  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  47115201 taatttctac 47115192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 13549040 - 13549147
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||  ||||||  || ||||| ||  || ||||||| |||    
T  13549040 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaaccct 13549138  T
Q  149 aatttctac 157  Q
    |||||||||    
T  13549139 aatttctac 13549147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 28223461 - 28223540
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  28223461 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 28223540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 30476486 - 30476565
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| |||| |||||| || ||||||||||||||| |||||||||||||||  | |||||||||||||| ||||||||    
T  30476486 agagattgatctgtccaatccagtatcaatgagttctt-acaaagagatacaaatgggttacaataaattatcttcaacaa 30476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 31925747 - 31925826
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  31925747 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 31925826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 37559908 - 37560078
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta-ttttcaacaaactatcatagaacaaacc 147  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||  | |||||| ||||||  |||||||||  |  || |||||||  |    
T  37559908 agagattgatctctccaattcactatcaacgagttc-ttacaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaactc 37560006  T
Q  148 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |||||||||| | |||||  ||||| | || || ||||||| ||||||||| |||||||| || |||||||||    
T  37560007 taatttctacccattttcctaatct-caccaatgaacaagacactcaatgattttcactcacctaatgtgttt 37560078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 1833650 - 1833481
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| || |||  ||||| | | |  || ||||||| |||    
T  1833650 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaatttagcttcaatagattcacaaagaacaaccct 1833552  T
Q  149 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  1833551 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 1833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 5460034 - 5459956
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaaca 128  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||| ||| |||||| |||||| ||||||  |||||||    
T  5460034 agagattgatctctccaatctactatcaatgagttctttacaaagaaatataaaatg-ttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 2263016 - 2263094
Alignment:
Q  51 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 129  Q
    ||||| |||||| |||| |||||||||| ||||||||||||| ||||| |||| | |||||| ||||||| ||||||||    
T  2263016 agattgatctcttcaatccactatcaataagttctttacaaaaagatataaaagggttacaagaaattatcttcaacaa 2263094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 13938258 - 13938126
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatac-aaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct 155  Q
    ||||||||||| |||||||||||||||  |||||||||||||| |||| | |||||| ||||||| ||  ||||  | ||  ||||| ||||||||||||    
T  13938258 atctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaattatattttacaagttctccaagaac-aacctaatttct 13938160  T
Q  156 actcttttctcaatctcctcccataaacaagaga 189  Q
    || | |||| ||||||| |||||  |||||||||    
T  13938159 acccatttcccaatctcttcccacgaacaagaga 13938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 23555305 - 23555412
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||    ||| || |||||| |||||||||  |  || ||||||| |||    
T  23555305 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttataagaaattagtttcaacaagttcacaaagaacaaccct 23555403  T
Q  149 aatttctac 157  Q
    |||||||||    
T  23555404 aatttctac 23555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 29136375 - 29136268
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||||| |||||||  | || ||| ||||||  |||||||| ||  || ||||||| |||    
T  29136375 agagattgatctctccaatccacgatcaatgagttc-ttacaaagaaatacaaatgggttccaagaaattagcttcaacaagctcacaaagaacaaccct 29136277  T
Q  149 aatttctac 157  Q
    |||||||||    
T  29136276 aatttctac 29136268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 42298015 - 42298122
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || | ||||| |||    
T  42298015 agagattgatctcttcaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaacaaccct 42298113  T
Q  149 aatttctac 157  Q
    |||||||||    
T  42298114 aatttctac 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 196956 - 197117
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||    |||||| ||||||  || ||||| ||  || ||||||| |||||||||||    
T  196956 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaaccctaatttcta 197054  T
Q  157 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    |   |||||||||||||  |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  197055 ccaattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgttt 197117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 834215 - 834313
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 156  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||||||||||    
T  834215 atctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttcta 834313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 2926638 - 2926567
Alignment:
Q  48 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    |||||||| ||||||||||| ||||| |||||| ||| || ||||||||| ||||| | |||||||||||||    
T  2926638 aagagattgatctctccaatccactaccaatgaattcgtttcaaagagatgcaaaaaggttacaataaatta 2926567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 13659376 - 13659482
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||  | | |||| ||||||  |||||||| ||  || | ||||| |||    
T  13659376 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaaccct 13659474  T
Q  149 aatttcta 156  Q
    ||||||||    
T  13659475 aatttcta 13659482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3189458 - 3189405
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  3189458 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaaa 3189405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3198275 - 3198222
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  3198275 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaaa 3198222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 3207114 - 3207061
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  3207114 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaaa 3207061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 218
Target Start/End: Complemental strand, 10925354 - 10925182
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttct--ttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac 146  Q
    ||||||| || |||||||| |||||||||||| ||||  |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |    
T  10925354 agagattgatttctccaatccactatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaacc 10925255  T
Q  147 ctaatttcta-ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
     ||||||||| |  |||| ||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  10925254 ataatttctatccattttttcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 10925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 13316392 - 13316461
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  13316392 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 13316461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 34603705 - 34603597
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 147  Q
    ||||||| |||||| |||| ||| |||||||||||| ||||||||||||| ||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  34603705 agagattgatctcttcaatccaccatcaatgagttc-ttacaaagagataaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 34603607  T
Q  148 taatttctac 157  Q
    ||||||||||    
T  34603606 taatttctac 34603597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 45644402 - 45644446
Alignment:
Q  57 atctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  45644402 atctctccaatccactatcaatgagttc-ttacaaagagatacaaa 45644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 153
Target Start/End: Complemental strand, 46065046 - 46064943
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||| |    |||||| ||||||  |||||| | ||  || |||||||||||    
T  46065046 agagattgatctctccaatccactatgaatgagttc-ttacaaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaacct 46064948  T
Q  149 aattt 153  Q
    |||||    
T  46064947 aattt 46064943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 928025 - 928123
Alignment:
Q  58 tctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttcta 156  Q
    |||||| ||| |||||| |||||||| ||||||||||||| ||||| | |||||| ||||||  |||||||| ||  || |||||||| |||||||||||    
T  928025 tctctctaatccactattaatgagtt-tttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttcta 928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 218
Target Start/End: Original strand, 13138016 - 13138183
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    |||||||  ||||| |||| ||||||||||| |||| |||||||||||| ||||  | |||||| ||||||  |||||||| ||  || |||||  ||||    
T  13138016 agagattgctctcttcaatccactatcaatgtgttc-ttacaaagagatgcaaatgggttacaagaaattagcttcaacaagctcacaaagaac-gacct 13138113  T
Q  149 aatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 218  Q
    ||||||||  | ||| ||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  13138114 aatttctatccatttttcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 13138183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 31065713 - 31065751
Alignment:
Q  61 ctccaattcactatcaatgagttctttacaaagagatac 99  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  31065713 ctccaattcactatcaaagagttctttacaaaaagatac 31065751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 32471579 - 32471486
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaattt 153  Q
    ||||| ||| |||||||||||||||  ||||||||||||||||||   || ||||||||||  |||||| |  | ||| ||||||||||||||||    
T  32471579 ctctcgaatccactatcaatgagtttcttacaaagagatacaaaagagttgcaataaattaacttcaac-agttctcaaagaacaaacctaattt 32471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 51765525 - 51765471
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  51765525 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 51765471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 6398680 - 6398631
Alignment:
Q  144 aacctaatttctactcttttctcaatctcctcccataaacaagagactca 193  Q
    |||||||||||||||| |||| ||||||| |||||| ||||||| |||||    
T  6398680 aacctaatttctactcatttcccaatctcttcccatgaacaagaaactca 6398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 37876806 - 37876858
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| |||||| |||| |||||||||||||||  |||||||||||||||||    
T  37876806 agagattgatctctgcaatccactatcaatgagtt-attacaaagagatacaaa 37876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 50169250 - 50169302
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| |||||| |||| |||||||||||||| | |||||||||||||||||    
T  50169250 agagattgatctcttcaatccactatcaatgagtac-ttacaaagagatacaaa 50169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 6398764 - 6398724
Alignment:
Q  59 ctctccaattcactatcaatgagttctttacaaagagatac 99  Q
    |||||||||||||||||||||||||  ||||||||| ||||    
T  6398764 ctctccaattcactatcaatgagtttcttacaaagatatac 6398724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 28242432 - 28242382
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaa 101  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||    
T  28242432 agagattgatctctccaatccactat-aatgagttc-ttacaaagagatacaa 28242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 277
Target Start/End: Original strand, 42298249 - 42298289
Alignment:
Q  237 cttaggatcttctcttttggttacccaagactcacctaagt 277  Q
    |||||||||||||||||||||| | ||||||||||| ||||    
T  42298249 cttaggatcttctcttttggtttcacaagactcacccaagt 42298289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 10617 - 10548
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  10617 agagattgatctcttcaatccactatcaacgagttctt-acaaagagatacaaaatggttacaataaatta 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 157
Target Start/End: Complemental strand, 7455 - 7348
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| |||| |||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  7455 agagattgatctttccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacctt 7357  T
Q  149 aatttctac 157  Q
    |||||||||    
T  7356 aatttctac 7348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 114730 - 114677
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 103  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  114730 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 157
Target Start/End: Original strand, 18044 - 18150
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||    |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  18044 agagattgatctctccaatccactatcaatgagt--tttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccct 18141  T
Q  149 aatttctac 157  Q
    |||||||||    
T  18142 aatttctac 18150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 20455 - 20578
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| || |||||| |||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || | |||||||||    
T  20455 agagattgatctctccaatccaatatcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaacct 20553  T
Q  149 aatttctactc-ttttctcaatctc 172  Q
    ||||||| ||| ||||| |||||||    
T  20554 aatttctgctcattttcccaatctc 20578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 149137 - 149243
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||  | | |||| ||||||  |||||||| ||  || | ||||| |||    
T  149137 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaaccct 149235  T
Q  149 aatttcta 156  Q
    ||||||||    
T  149236 aatttcta 149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 11201 - 11318
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 148  Q
    ||||||| | ||||||||| ||||||||| ||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  11201 agagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaaccct 11300  T
Q  149 aatttctactcttttctc 166  Q
    ||||||||| ||||||||    
T  11301 aatttctacccttttctc 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 8775 - 8845
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| ||||||||| ||||||||   |||||||||||||| | |||||| ||||||    
T  8775 agagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaatta 8845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 11685 - 11633
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 102  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||    
T  11685 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaa 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 119
Target Start/End: Complemental strand, 1043 - 975
Alignment:
Q  49 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 119  Q
    ||||||| | ||||||||| ||||||||||||||| ||  ||||||||||||||| | |||||| ||||||    
T  1043 agagattgaactctccaatccactatcaatgagttgtt--caaagagatacaaaagggttacaagaaatta 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 80338 - 80430
Alignment:
Q  64 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 157  Q
    |||||||||||| |||||||||| ||||| |||||||||  | || ||| ||||||  |||||||| ||  || ||||||| ||||||||||||    
T  80338 caattcactatctatgagttctt-acaaaaagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaaccctaatttctac 80430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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