View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11821_high_7 (Length: 530)

Name: NF11821_high_7
Description: NF11821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11821_high_7
NF11821_high_7
[»] chr8 (22 HSPs)
chr8 (242-513)||(25847661-25847932)
chr8 (41-179)||(25848144-25848283)
chr8 (48-142)||(6100480-6100572)
chr8 (48-142)||(14666081-14666173)
chr8 (65-142)||(9860022-9860097)
chr8 (62-142)||(10927614-10927692)
chr8 (55-112)||(14846611-14846668)
chr8 (61-113)||(22958805-22958857)
chr8 (55-142)||(45521177-45521261)
chr8 (48-107)||(18374051-18374110)
chr8 (62-116)||(3418537-3418591)
chr8 (55-113)||(4479313-4479371)
chr8 (66-142)||(2467146-2467220)
chr8 (55-116)||(3567936-3567997)
chr8 (55-142)||(8141110-8141195)
chr8 (55-142)||(15884573-15884657)
chr8 (61-116)||(24938585-24938640)
chr8 (55-141)||(43027314-43027398)
chr8 (62-142)||(1013001-1013079)
chr8 (61-94)||(26570978-26571011)
chr8 (62-141)||(27975900-27975977)
chr8 (62-141)||(28033169-28033246)
[»] chr4 (33 HSPs)
chr4 (61-141)||(16450310-16450388)
chr4 (55-142)||(8889031-8889116)
chr4 (65-142)||(1446835-1446910)
chr4 (65-142)||(29895796-29895871)
chr4 (61-142)||(36145238-36145317)
chr4 (55-113)||(40780878-40780936)
chr4 (55-142)||(52950091-52950176)
chr4 (48-142)||(42722587-42722679)
chr4 (61-142)||(6779220-6779299)
chr4 (71-141)||(31588694-31588764)
chr4 (65-142)||(43468356-43468431)
chr4 (55-142)||(55921043-55921128)
chr4 (55-106)||(46108734-46108785)
chr4 (55-140)||(4738629-4738712)
chr4 (55-113)||(7246663-7246721)
chr4 (61-107)||(14859333-14859379)
chr4 (67-140)||(20421784-20421855)
chr4 (62-107)||(28944973-28945018)
chr4 (55-112)||(47682399-47682456)
chr4 (62-142)||(53599069-53599147)
chr4 (61-113)||(7741961-7742013)
chr4 (55-142)||(38075442-38075527)
chr4 (71-142)||(47078467-47078536)
chr4 (65-116)||(8064825-8064876)
chr4 (61-139)||(20532432-20532508)
chr4 (55-113)||(36262784-36262842)
chr4 (61-138)||(43458626-43458701)
chr4 (55-112)||(295550-295607)
chr4 (48-113)||(17080079-17080144)
chr4 (61-141)||(24166460-24166538)
chr4 (55-107)||(6032660-6032712)
chr4 (55-107)||(14858752-14858804)
chr4 (55-107)||(21429343-21429395)
[»] chr2 (36 HSPs)
chr2 (48-142)||(2550872-2550964)
chr2 (55-116)||(12864252-12864313)
chr2 (55-139)||(16325602-16325684)
chr2 (55-142)||(331505-331590)
chr2 (48-116)||(6358161-6358229)
chr2 (61-113)||(34722711-34722763)
chr2 (55-139)||(22593142-22593223)
chr2 (55-112)||(24179600-24179657)
chr2 (62-142)||(41220639-41220717)
chr2 (55-142)||(3811708-3811793)
chr2 (48-112)||(37560205-37560269)
chr2 (55-142)||(38962767-38962852)
chr2 (55-141)||(25540421-25540505)
chr2 (69-104)||(34130333-34130368)
chr2 (61-142)||(8410135-8410214)
chr2 (67-112)||(2784964-2785009)
chr2 (56-113)||(3643905-3643962)
chr2 (55-112)||(10026633-10026690)
chr2 (62-142)||(10823064-10823142)
chr2 (55-116)||(14169626-14169687)
chr2 (55-107)||(10046494-10046546)
chr2 (55-107)||(18902547-18902599)
chr2 (48-112)||(26805328-26805392)
chr2 (55-142)||(34356210-34356295)
chr2 (55-142)||(41031923-41032008)
chr2 (47-113)||(13104834-13104900)
chr2 (62-116)||(28616403-28616457)
chr2 (62-142)||(7747278-7747356)
chr2 (55-100)||(20116629-20116674)
chr2 (48-101)||(20963120-20963173)
chr2 (71-116)||(21180347-21180392)
chr2 (61-106)||(25549766-25549811)
chr2 (55-100)||(29697567-29697612)
chr2 (71-116)||(30721888-30721933)
chr2 (55-100)||(39201525-39201570)
chr2 (48-113)||(42770661-42770726)
[»] chr3 (35 HSPs)
chr3 (61-142)||(47303513-47303592)
chr3 (55-142)||(45877458-45877543)
chr3 (55-116)||(29127947-29128008)
chr3 (48-142)||(7328848-7328939)
chr3 (65-116)||(54237476-54237527)
chr3 (41-142)||(30045825-30045924)
chr3 (55-140)||(47219150-47219233)
chr3 (65-142)||(49198355-49198430)
chr3 (62-142)||(54261230-54261308)
chr3 (55-138)||(29135921-29136002)
chr3 (61-113)||(31072909-31072961)
chr3 (55-142)||(35315960-35316045)
chr3 (55-142)||(51060299-51060384)
chr3 (61-116)||(3136718-3136773)
chr3 (61-116)||(53649755-53649810)
chr3 (61-107)||(3755607-3755653)
chr3 (61-142)||(26043816-26043895)
chr3 (41-142)||(30767251-30767350)
chr3 (61-107)||(32873573-32873619)
chr3 (55-116)||(25294988-25295049)
chr3 (55-116)||(33688979-33689040)
chr3 (55-142)||(7650231-7650316)
chr3 (48-100)||(33251706-33251758)
chr3 (55-107)||(49021221-49021273)
chr3 (48-107)||(23511604-23511663)
chr3 (55-141)||(28572229-28572313)
chr3 (48-138)||(40660338-40660426)
chr3 (62-100)||(8362621-8362659)
chr3 (62-104)||(29195344-29195386)
chr3 (55-105)||(32522018-32522068)
chr3 (62-112)||(34662344-34662394)
chr3 (61-107)||(45450471-45450517)
chr3 (55-116)||(29762173-29762234)
chr3 (61-106)||(48342058-48342103)
chr3 (71-107)||(24506682-24506718)
[»] chr1 (30 HSPs)
chr1 (41-141)||(17642008-17642106)
chr1 (55-142)||(26325817-26325902)
chr1 (55-142)||(41663874-41663959)
chr1 (61-142)||(10422793-10422872)
chr1 (65-142)||(49078119-49078194)
chr1 (55-106)||(5504070-5504121)
chr1 (72-142)||(28324615-28324683)
chr1 (69-142)||(32876-32947)
chr1 (61-142)||(33498863-33498942)
chr1 (62-142)||(5855527-5855605)
chr1 (55-142)||(8763996-8764081)
chr1 (65-112)||(35908791-35908838)
chr1 (73-142)||(6563446-6563513)
chr1 (61-113)||(12036768-12036820)
chr1 (61-140)||(45726457-45726534)
chr1 (55-106)||(9659197-9659248)
chr1 (48-107)||(10336554-10336613)
chr1 (62-113)||(26258727-26258778)
chr1 (61-112)||(48761209-48761260)
chr1 (55-113)||(4581700-4581758)
chr1 (55-113)||(10172989-10173047)
chr1 (55-113)||(14254286-14254344)
chr1 (48-106)||(18708551-18708609)
chr1 (55-100)||(30927745-30927790)
chr1 (48-140)||(32150933-32151023)
chr1 (62-142)||(45361907-45361985)
chr1 (55-95)||(11397907-11397947)
chr1 (61-140)||(16263552-16263629)
chr1 (71-142)||(18915872-18915941)
chr1 (61-113)||(33418139-33418191)
[»] chr5 (33 HSPs)
chr5 (55-142)||(8513524-8513609)
chr5 (55-142)||(9805009-9805094)
chr5 (62-142)||(5731944-5732022)
chr5 (55-116)||(39099796-39099857)
chr5 (55-142)||(1538436-1538521)
chr5 (55-142)||(42086332-42086417)
chr5 (61-112)||(14974347-14974398)
chr5 (41-112)||(41163463-41163534)
chr5 (61-142)||(7308387-7308466)
chr5 (65-142)||(20525843-20525918)
chr5 (61-142)||(23247374-23247453)
chr5 (41-142)||(23383662-23383761)
chr5 (55-142)||(19572729-19572814)
chr5 (61-113)||(42291528-42291580)
chr5 (61-116)||(15034104-15034159)
chr5 (61-107)||(14588640-14588686)
chr5 (55-116)||(42861235-42861296)
chr5 (49-113)||(9168264-9168328)
chr5 (55-107)||(24875383-24875435)
chr5 (61-116)||(13664289-13664344)
chr5 (61-116)||(20255398-20255453)
chr5 (55-113)||(12766163-12766221)
chr5 (55-113)||(14728115-14728173)
chr5 (81-142)||(28857133-28857192)
chr5 (61-107)||(35813021-35813067)
chr5 (48-140)||(22655168-22655257)
chr5 (49-90)||(25950605-25950646)
chr5 (48-113)||(40117447-40117512)
chr5 (55-142)||(7866586-7866671)
chr5 (55-142)||(9812877-9812962)
chr5 (68-100)||(17693371-17693403)
chr5 (75-142)||(18136317-18136382)
chr5 (48-116)||(24653822-24653889)
[»] chr7 (32 HSPs)
chr7 (61-142)||(26423310-26423389)
chr7 (48-139)||(5039428-5039517)
chr7 (55-142)||(38578884-38578969)
chr7 (55-142)||(48804690-48804775)
chr7 (48-142)||(1797467-1797559)
chr7 (48-113)||(39474974-39475039)
chr7 (55-142)||(13095865-13095950)
chr7 (55-142)||(17748399-17748484)
chr7 (55-142)||(22973974-22974059)
chr7 (48-116)||(27875098-27875166)
chr7 (55-142)||(36619271-36619356)
chr7 (62-112)||(29805464-29805514)
chr7 (73-142)||(43925519-43925586)
chr7 (50-115)||(38988932-38988997)
chr7 (55-142)||(10047893-10047978)
chr7 (61-113)||(41945507-41945559)
chr7 (61-112)||(3353459-3353510)
chr7 (49-112)||(4228765-4228828)
chr7 (55-141)||(21530756-21530840)
chr7 (55-106)||(24983436-24983487)
chr7 (48-142)||(43861982-43862074)
chr7 (61-116)||(45960026-45960081)
chr7 (55-113)||(8734703-8734761)
chr7 (55-113)||(19914720-19914778)
chr7 (62-116)||(34865902-34865955)
chr7 (49-107)||(49142680-49142738)
chr7 (55-139)||(4195219-4195301)
chr7 (56-113)||(39420871-39420928)
chr7 (55-100)||(41267941-41267986)
chr7 (55-116)||(45697207-45697268)
chr7 (61-113)||(1605975-1606027)
chr7 (55-142)||(18785676-18785761)
[»] chr6 (23 HSPs)
chr6 (62-142)||(21898656-21898734)
chr6 (55-112)||(34954636-34954693)
chr6 (55-142)||(5253240-5253325)
chr6 (55-142)||(6606114-6606199)
chr6 (66-116)||(13036032-13036082)
chr6 (55-112)||(13468969-13469026)
chr6 (55-107)||(2271320-2271372)
chr6 (71-142)||(14107391-14107460)
chr6 (55-140)||(8938721-8938804)
chr6 (55-142)||(8932669-8932754)
chr6 (55-142)||(8944135-8944220)
chr6 (41-113)||(29444768-29444840)
chr6 (61-142)||(3587968-3588047)
chr6 (70-116)||(5333036-5333082)
chr6 (55-140)||(19089508-19089591)
chr6 (55-104)||(8149814-8149863)
chr6 (70-142)||(9147309-9147379)
chr6 (55-100)||(14783437-14783482)
chr6 (61-106)||(31129219-31129264)
chr6 (48-112)||(8888918-8888982)
chr6 (41-113)||(10311472-10311544)
chr6 (55-107)||(11142644-11142696)
chr6 (61-101)||(17114920-17114960)
[»] scaffold0291 (1 HSPs)
scaffold0291 (55-142)||(6862-6947)
[»] scaffold0016 (1 HSPs)
scaffold0016 (41-142)||(8704-8803)
[»] scaffold0316 (1 HSPs)
scaffold0316 (48-107)||(1624-1683)
[»] scaffold0223 (1 HSPs)
scaffold0223 (55-141)||(16887-16971)
[»] scaffold0341 (1 HSPs)
scaffold0341 (73-142)||(18639-18706)
[»] scaffold0170 (1 HSPs)
scaffold0170 (55-113)||(9879-9937)
[»] scaffold0009 (2 HSPs)
scaffold0009 (55-113)||(42849-42907)
scaffold0009 (55-94)||(9495-9534)
[»] scaffold0005 (1 HSPs)
scaffold0005 (71-142)||(271107-271176)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-142)||(577-662)
[»] scaffold0384 (1 HSPs)
scaffold0384 (55-113)||(6006-6064)
[»] scaffold0011 (2 HSPs)
scaffold0011 (70-112)||(186552-186594)
scaffold0011 (55-108)||(224356-224409)


Alignment Details
Target: chr8 (Bit Score: 264; Significance: 1e-147; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 242 - 513
Target Start/End: Complemental strand, 25847932 - 25847661
Alignment:
Q  242 tctggtattgaattgcacatgtatacatttttctgggaacaacaaaagcaaagacaatttctcactagccaccaccactcactgaacctctctgtatcaa 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25847932 tctggtattgaattgcacatgtatacatttttctgggaacaacaaaagcaacgacaatttctcactagccaccaccactcactgaacctctctgtatcaa 25847833  T
Q  342 caacgaaaaagagaagaaaatagaatcgtaacactgaaaacaagattcgaatggcgttcgaattacctatagatcaaataaagcagttacagatccttct 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25847832 caacgaaaaagagaagaaaatagaatcgtaacactgaaaacaagattcgaatggcgttcgaattaccaatagatcaaataaagcagttacagatccttct 25847733  T
Q  442 tcgcaaagatgccaatctctcatggtacaatccagaaaatgacgaaaatctccctctcccaaacctccattc 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25847732 tcgcaaagatgccaatctctcatggtacaatccagaaaatgacgaaaatctccctctcccaaacctccattc 25847661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 179
Target Start/End: Complemental strand, 25848283 - 25848144
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25848283 cgcacaagttttcgacccagcaaaggtggacgactagtccgactcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 25848184  T
Q  141 cgttgccacgggatcccaaacaactt-gttgacaaaatgg 179  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  25848183 cgttgccacgggatcccaaacaacttggttgacaaaatgg 25848144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 6100572 - 6100480
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| |||||  ||||||| |||||||||| ||||||||||||| | |||| |||||| ||||  | |||||| |||||||||||||||||||    
T  6100572 gttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaa--gcgttgttcctcctgggaatcgaacccg 6100480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 14666081 - 14666173
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| ||||| |||  |||| ||||||||||||||  ||||||||| |||| |||||| ||||  |||||||||| |||||||||||||||||    
T  14666081 gttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaa--gtgttgtttcccctgggaatcgaacccg 14666173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 9860022 - 9860097
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||||||||||||||||||| |||||| ||||  ||||| ||||  |||||||| | |||||||||||||||||    
T  9860022 ggtggacgactaatctggctcatgtgtagaggcatgcacactggccaa--gtgttgttccccctgggaatcgaacccg 9860097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 10927692 - 10927614
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||| ||||||||||||||| |||| |||||| ||||  | |||||| ||||| |||||||||||||    
T  10927692 aaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctaggaatcgaacccg 10927614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 14846668 - 14846611
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||||||||||||||| ||||| ||||||||||||| |||| |||||||||||    
T  14846668 acccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaa 14846611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 22958857 - 22958805
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||||||||||||| ||||||||| ||||||||||  |||||||||||    
T  22958857 caaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaag 22958805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 45521261 - 45521177
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||  ||||||||| ||||||||||||||| |||| ||||||| |||  |||||| ||| |||||||||||||||||    
T  45521261 acccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaa--gtgttg-ttcccctgggaatcgaacccg 45521177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 18374110 - 18374051
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||||| ||||| ||||| ||||||||||||| ||||||||||||||| |||| ||||||    
T  18374110 gttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactg 18374051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 3418537 - 3418591
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||| ||||||||    
T  3418537 aaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgt 3418591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 4479313 - 4479371
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| |||||||||||||||||||  |||||||||||||| |||| |||||| |||||    
T  4479313 acccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaag 4479371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 2467146 - 2467220
Alignment:
Q  66 gtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||||||||| ||||||||| |||||||||| |||||| ||||  | |||||| | ||||| |||||||||||    
T  2467146 gtggacgactaatccggctcatgcatagagacatgcgcactggccaa--gagttgttccccctggaaatcgaacccg 2467220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 3567997 - 3567936
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| |||||||||| ||||||| ||||||||||||||||  ||||||||||  |||||||    
T  3567997 acccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaagtgt 3567936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 8141195 - 8141110
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||| |||||||||||||   |||||||||||||| |||| |||||| ||||  | |||||||| ||||| |||||||||||    
T  8141195 acccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaa--gcgttgtttcccctggaaatcgaacccg 8141110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 15884573 - 15884657
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||||||||| ||||| ||||||||| |||| |||||  ||||||||  |||| | |||||||||||||||||    
T  15884573 acccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgt--tgttcc-cctgggaatcgaacccg 15884657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 24938585 - 24938640
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||||||| |||||||| || |||||||||||| |||| ||| |||||||||||    
T  24938585 caaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgt 24938640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 43027398 - 43027314
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| |||| ||| ||  |||    |||||| ||||||||||||||||||    
T  43027398 acccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaa--tcgttgttcctcctgggaatcgaaccc 43027314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 1013001 - 1013079
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||| ||||  ||||||||||||||| |||||| |||| ||||  | |||||| | |||||||||||||||||    
T  1013001 aaaggtgaacgattaattcggctcatgcgtagaggcatgtgtactggccaa--gcgttgttccccctgggaatcgaacccg 1013079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 26571011 - 26570978
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtaga 94  Q
    ||||||||||||||||||| ||||||||||||||    
T  26571011 caaaggtggacgactaatccggctcatgcgtaga 26570978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 27975977 - 27975900
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    |||||||| ||| ||||| |||||| |||||||| ||||  |||||| |||||||  |||| || |||||||||||||||    
T  27975977 aaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgt--tgttccttctgggaatcgaaccc 27975900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 28033246 - 28033169
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    |||||||| ||| ||||| |||||| |||||||| ||||  |||||| |||||||  |||| || |||||||||||||||    
T  28033246 aaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgt--tgttccttctgggaatcgaaccc 28033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 16450388 - 16450310
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||  | |||||| | ||||||||||||||||    
T  16450388 caaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaa--gcgttgttccccctgggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 8889116 - 8889031
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | ||| |||||||||||||    
T  8889116 acccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaa--gtgttgttccccctaggaatcgaacccg 8889031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 1446910 - 1446835
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  1446910 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 1446835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 29895871 - 29895796
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  29895871 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 29895796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 36145238 - 36145317
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||||||| |||||||| |||||| |||| ||||||| |||  | |||||||| |||||||||||||||||    
T  36145238 caaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaa--gcgttgtttcccctgggaatcgaacccg 36145317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 40780878 - 40780936
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  40780878 acccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaag 40780936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 52950176 - 52950091
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||||||||||||||||||||| ||||| |||||| |||| |||||| ||||  | |||||| | |||||||||||||||||    
T  52950176 acccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaa--gcgttgttccccctgggaatcgaacccg 52950091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 42722587 - 42722679
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| |||||  ||||||| |||||||||| ||||||||||||||| |||| |||||| ||||  | |||||| ||||||||||| |||||||    
T  42722587 gttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctgggaattgaacccg 42722679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 6779299 - 6779220
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||||||| ||||||||| ||||| |||| |||||| |||   |||||||| | |||||||||||||||||    
T  6779299 caaaggtggacgactaatccggctcatgcatagaggcatgcgcactggcca--ggtgttgttccccctgggaatcgaacccg 6779220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 31588764 - 31588694
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||||||| |||||||||||||||||||| |||||| ||||| | ||||||||  ||||||||| |||||    
T  31588764 cgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatcaaaccc 31588694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 43468431 - 43468356
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| |||||||||||||||| |||||||||| ||||  | |||||| | |||||||||||||||||    
T  43468431 ggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaa--gcgttgttccccctgggaatcgaacccg 43468356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 55921128 - 55921043
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||  ||| ||||| ||||||| ||||||| |||| |||||||||||  |||||||| | |||||||||||||||||    
T  55921128 acccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaa--gtgttgttccccctgggaatcgaacccg 55921043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 46108785 - 46108734
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    ||||| |||| |||||||||||||||||||||||||||||| |||| |||||    
T  46108785 acccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcact 46108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 4738712 - 4738629
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||| |||||| | ||  | |||||| ||||||| |||||||||    
T  4738712 acccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaa--gcgttgttcctcctggaaatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 7246663 - 7246721
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||| |||||    
T  7246663 acccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaag 7246721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 14859379 - 14859333
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||||||||| |||||||||||||| |||||||||||||| ||||||    
T  14859379 caaaggtggatgactaatctggctcgtgcgtagagacatgcgcactg 14859333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 20421855 - 20421784
Alignment:
Q  67 tggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||||| ||||||||||||||||||||| |||| |||||| ||||  |||||||| | ||||| |||||||||    
T  20421855 tggacgattaatctggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctggaaatcgaacc 20421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 28945018 - 28944973
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||    
T  28945018 aaagatggacgactaatccgactcatgcgtagagacatgtgcactg 28944973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 47682399 - 47682456
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||||||||| ||||||| | ||||| ||||||||||||||||||||| ||||    
T  47682399 acccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaa 47682456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 53599147 - 53599069
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||| ||||| ||||||||||||||| |||| |||||| ||||    |||||| |||||||||||||||||||    
T  53599147 aaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaa--acgttgttcctcctgggaatcgaacccg 53599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 7742013 - 7741961
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| |||||||||||||||| || ||||||||| ||||||||||| |||||    
T  7742013 caaagatggacgactaatctggatcgtgcgtagaggcatgtgcactggccaag 7741961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 38075527 - 38075442
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||| | ||||  ||||||||||||||| |||| |||||| ||||  | |||||||| |||| ||||||||||||    
T  38075527 acccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaa--gcgttgtttcccctgagaatcgaacccg 38075442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 47078536 - 47078467
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||| ||||| ||||||||| ||||||||||| ||||  | |||||| | |||||||||||||||||    
T  47078536 cgactaatccggctcgtgcgtagaggcatgtgcactggccaa--gcgttgttccccctgggaatcgaacccg 47078467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 8064825 - 8064876
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||  |||||||    
T  8064825 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgt 8064876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 20532432 - 20532508
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaac 139  Q
    ||||||||| ||||| ||| ||||||||||||||| |||| |||||| ||||  | |||||| ||||||| ||||||||    
T  20532432 caaaggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctggaaatcgaac 20532508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 36262784 - 36262842
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| ||||||||| | ||| ||||||||| ||||||||||| |||||    
T  36262784 acccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaag 36262842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 138
Target Start/End: Complemental strand, 43458701 - 43458626
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaa 138  Q
    ||||||||||||||||||| ||||| | ||||||| |||| |||||| ||||  | ||| || |||||||||||||||    
T  43458701 caaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaa--gcgttcttcctcctgggaatcgaa 43458626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 295550 - 295607
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||| |||||||||||||||||| || ||||||||| |||| |||||| ||||    
T  295550 acccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaa 295607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 17080144 - 17080079
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||||| | ||| ||||||||  ||||||||| ||||||||||||||| |||| |||||| |||||    
T  17080144 gttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaag 17080079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 24166538 - 24166460
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    |||||||||  |||||||||||||| ||||||||| |||| |||||| ||||    |||||||| | ||||||||||||||    
T  24166538 caaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaa--acgttgtttcccttgggaatcgaaccc 24166460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 6032660 - 6032712
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||||| ||||||||||| ||||||| ||||||| |||| ||||||    
T  6032660 acccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactg 6032712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 14858804 - 14858752
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||||||||||| ||||||| ||| | |||||||||||| ||||||    
T  14858804 acccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactg 14858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 21429395 - 21429343
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| |||||||||||||||| |||| ||| ||||||||| |||| ||||||    
T  21429395 acccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactg 21429343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 2550964 - 2550872
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| ||||| |||| |||| ||||||||| |||||||||||||||||||| |||||| | ||  |||||||| |||||||||||||||||||    
T  2550964 gttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaa--gtgttgttcctcctgggaatcgaacccg 2550872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 12864313 - 12864252
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  12864313 acccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgt 12864252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 16325684 - 16325602
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaac 139  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||  ||||| ||||  |||||||| | ||||||||||||||    
T  16325684 acccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaa--gtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 331590 - 331505
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||||||||| ||||||||||||||  |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  331590 acccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 331505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 6358161 - 6358229
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||| |||| |||||| ||||||||    
T  6358161 gttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgt 6358229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 34722763 - 34722711
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  34722763 caaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaag 34722711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 22593223 - 22593142
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaac 139  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||    |||||| | ||||||||||||||    
T  22593223 acccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa---cgttgttccccctgggaatcgaac 22593142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 24179657 - 24179600
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  24179657 acccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaa 24179600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 41220717 - 41220639
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||  ||||||||||||||| |||| |||||| ||||  | |||||| |||||||||||||||||||    
T  41220717 aaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctgggaatcgaacccg 41220639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 3811708 - 3811793
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||| ||||| ||||||||||||||| |||| ||| |||||||  |||||||| |  ||||||||||||||||    
T  3811708 acccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaa--gtgttgttccctctgggaatcgaacccg 3811793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 37560269 - 37560205
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||| ||||| ||||||||||||| ||||| ||||| ||||||||| |||| |||||||||||    
T  37560269 gttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaa 37560205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 38962852 - 38962767
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||| || |||||||||||| |||| |||||| ||||  | |||||| ||||||  |||||||||||    
T  38962852 acccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctgaaaatcgaacccg 38962767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 25540421 - 25540505
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| |||| |||||| ||||  | |||||| | ||| ||||||||||||    
T  25540421 acccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa--gcgttgttccccctaggaatcgaaccc 25540505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 34130333 - 34130368
Alignment:
Q  69 gacgactaatctggctcatgcgtagagacatgtgca 104  Q
    ||||||||||||||||||||||||||||||||||||    
T  34130333 gacgactaatctggctcatgcgtagagacatgtgca 34130368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 8410214 - 8410135
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||| |||| ||||||||| ||||| ||||||||| |||| |||||| ||||||||  |||| | |||||||||||||||||    
T  8410214 caaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgt--tgttccccctgggaatcgaacccg 8410135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 2785009 - 2784964
Alignment:
Q  67 tggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||||    
T  2785009 tggacgactaatctgactcatgcgtagaggcatgcgcactgaccaa 2784964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 3643905 - 3643962
Alignment:
Q  56 cccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||| |||||||||||||||||||  |||||||||||||| |||| |||||| |||||    
T  3643905 cccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaag 3643962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 10026633 - 10026690
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||| ||||    
T  10026633 acccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaa 10026690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 10823142 - 10823064
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||| ||||||||| ||||| ||||||||| |||| |||||| ||||| ||  |||| |||||||||||| ||||||    
T  10823142 aaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgt--tgttcctcctgggaatcaaacccg 10823064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 14169626 - 14169687
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||| ||| ||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  14169626 acccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgt 14169687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 10046494 - 10046546
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| ||||||    
T  10046494 acccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg 10046546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 18902547 - 18902599
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||||||| ||||||||||||||| |||||||||||| | ||||||    
T  18902547 acccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactg 18902599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 26805392 - 26805328
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||| | ||| ||||||||| ||||||||| | ||||||||||||| ||||||||||| ||||    
T  26805392 gttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaa 26805328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 34356295 - 34356210
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| |||| |||| ||||| ||||||||| ||||| |||| |||||||||||  |||||||| | ||||| |||||||||||    
T  34356295 acccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaa--gtgttgttccccctggaaatcgaacccg 34356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 41031923 - 41032008
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||||||||  |||||||| ||||| ||||||||| ||||  ||||| ||||||||  |||| | |||||||||||||||||    
T  41031923 acccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgt--tgttccccctgggaatcgaacccg 41032008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 13104834 - 13104900
Alignment:
Q  47 agttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||| ||| | ||||||| |||||||||| | |||||||||||||| |||| |||||| |||||    
T  13104834 agttttcgacctatcaaaggtagacgactaatttagctcatgcgtagaggcatgcgcactggccaag 13104900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 28616403 - 28616457
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||| ||| ||||||||||||||| ||||||||| |||| |||||| ||||||||    
T  28616403 aaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgt 28616457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 7747356 - 7747278
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||| ||||||||||||||| ||||  ||||| ||||    |||||| ||||| |||||||||||||    
T  7747356 aaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaa--acgttgttcctcctaggaatcgaacccg 7747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 20116629 - 20116674
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||| ||||    
T  20116629 acccatcaaaggtggacggctaatccggctcatgcgtagaggcatg 20116674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 20963120 - 20963173
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgt 101  Q
    |||||| ||||| ||||||||| ||||||||||| ||||| ||||||| |||||    
T  20963120 gttttcgacccatcaaaggtgggcgactaatctgcctcatacgtagaggcatgt 20963173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 21180347 - 21180392
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||| ||||| ||||||||| ||||||||||| ||||||||    
T  21180347 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgt 21180392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 25549811 - 25549766
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    ||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  25549811 caaagatggacgactaatccggctcgtgcgtagaggcatgtgcact 25549766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 29697612 - 29697567
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||||||||||||  ||||||||||  ||||||||||||||||||    
T  29697612 acccagcaaaggtgagcgactaatctaactcatgcgtagagacatg 29697567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 30721888 - 30721933
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||    
T  30721888 cgactaatccgactcatacgtagagacatgcgcactgaccaagtgt 30721933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 39201525 - 39201570
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||| |||||||| |||||||||| ||||||||||||||| ||||    
T  39201525 acccaccaaaggtgaacgactaatccggctcatgcgtagaggcatg 39201570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 42770661 - 42770726
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||||| ||||| ||||||||||||| ||||| ||||| |||| |||| |||| |||||| |||||    
T  42770661 gttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaag 42770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 47303513 - 47303592
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| ||||||||||| |||||||| |||||| ||||||||||||||||  |||||||| |||||||||||| ||||||    
T  47303513 caaaggttgacgactaatccggctcatgtgtagaggcatgtgcactgaccaa--gtgttgttcctcctgggaatcaaacccg 47303592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 45877543 - 45877458
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| |||| |||||||||| ||||||||||||||| ||||||||||| ||||  |||||||||| ||||| |||||||||||    
T  45877543 acccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaa--gtgttgtttcccctggaaatcgaacccg 45877458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 29128008 - 29127947
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||||||||||||    
T  29128008 acccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgt 29127947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 7328939 - 7328848
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| ||||| ||||||||| ||||||||| |||||||||||| || |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  7328939 gttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 7328848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 54237527 - 54237476
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  54237527 ggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgt 54237476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 30045924 - 30045825
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||| | ||||| ||||||||||||||||||| | ||| |||||||||||||| |||||| ||||  | |||||| | ||| |||||||||||    
T  30045924 cgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaa--gcgttgttccccctaggaatcgaacc 30045827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 47219233 - 47219150
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||  ||||  | |||||||| | |||||||||||||    
T  47219233 acccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaa--gcgttgtttcccttgggaatcgaacc 47219150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 49198430 - 49198355
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | ||| |||||||||||||    
T  49198430 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctaggaatcgaacccg 49198355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 54261308 - 54261230
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||| ||||||||||||||| |||| |||||| ||||  | |||||| ||||| |||||||||||||    
T  54261308 aaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctaggaatcgaacccg 54261230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 29136002 - 29135921
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaa 138  Q
    ||||| ||| |||||| |||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||    
T  29136002 acccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaa 29135921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 31072961 - 31072909
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||||||| |||||||| || ||||||||| |||||||||||||||||    
T  31072961 caaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaag 31072909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 35316045 - 35315960
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||| |||| |||||||||  |||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  35316045 acccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 35315960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 51060299 - 51060384
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| |||||||||||||||  | |||||||||||| |||| |||||||||||  |||||||| | |||| ||||||||||||    
T  51060299 acccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaa--gtgttgttccccctgagaatcgaacccg 51060384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 3136718 - 3136773
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||||||||||||| | ||||||||||||| |||| |||||| ||||||||    
T  3136718 caaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgt 3136773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 53649810 - 53649755
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||||| |||||||||| |||||||||||||||||| | |||||| ||||||||    
T  53649810 caaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgt 53649755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Complemental strand, 3755653 - 3755607
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  3755653 caaaggtagacgactaatccggctcatgcgtagagacatgcgcactg 3755607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 26043895 - 26043816
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||  ||||||||| ||||||||||||||| |||| |||||| ||||  ||||||||   |||||||||||||||||    
T  26043895 caaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttctccctgggaatcgaacccg 26043816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 30767251 - 30767350
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||| | ||||| ||||||||| ||||||||| ||||| ||||||||| ||||  ||||| ||||||||  |||| | ||||| |||||||||    
T  30767251 cgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgt--tgttccccctggaaatcgaacc 30767348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 32873573 - 32873619
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  32873573 caaaggtgggcgactaatctggctcatacgtagaggcatgtgcactg 32873619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 25295049 - 25294988
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||| ||||||||||||||| ||||||||| ||||| |||| |||||| ||||||||    
T  25295049 acccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgt 25294988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 33689040 - 33688979
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||| |||||| |||||| ||||||||||||||||| |||| |||||| ||||||||    
T  33689040 acccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgt 33688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 7650316 - 7650231
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||||||||| ||||| |||||||||||||  | |||| ||||  |||||||| | ||||| |||||||||||    
T  7650316 acccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaa--gtgttgttccccctggaaatcgaacccg 7650231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 33251758 - 33251706
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    |||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  33251758 gttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatg 33251706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 49021221 - 49021273
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| |||| ||||||    
T  49021221 acccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg 49021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 23511663 - 23511604
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||||| ||||| ||||||||||||| ||||| | ||||||||||||| |||| ||||||    
T  23511663 gttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactg 23511604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Original strand, 28572229 - 28572313
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||| ||||||||| ||||||||| ||||| ||||||||| ||||   |||| ||||| ||  |||||| ||||||||||||||||    
T  28572229 acccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgt--tgtttcccctgggaatcgaaccc 28572313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 40660338 - 40660426
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaa 138  Q
    |||||| ||||| |||||||| | || ||||| || |||||||||||| |||| |||||||||||   ||||||| ||||| |||||||||    
T  40660338 gttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaa--atgttgttcctcctaggaatcgaa 40660426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 8362659 - 8362621
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  8362659 aaaggtggacgactaatttggctcatgcgtagaggcatg 8362621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 29195344 - 29195386
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgca 104  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||    
T  29195344 aaaggtggacgactaatctggttcatgtgtagaggcatgtgca 29195386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 32522068 - 32522018
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcac 105  Q
    ||||| ||||||||||||||||||||| |||||||||| | ||||| ||||    
T  32522068 acccatcaaaggtggacgactaatctgactcatgcgtaaatacatgcgcac 32522018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 34662344 - 34662394
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||||||||||||||  ||||||||| |||||||||| | |||||||||    
T  34662344 aaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaa 34662394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 45450471 - 45450517
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||||||||||||||||||| ||| |||||||||| |||| ||||||    
T  45450471 caaaggtggacgactaatctagcttatgcgtagaggcatgcgcactg 45450517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 29762173 - 29762234
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||| |||||||||||||||  |||||||| ||||| |||| |||||| ||||||||    
T  29762173 acccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgt 29762234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 48342103 - 48342058
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    ||||| |||||||||||||||| |||||||||||| |||| |||||    
T  48342103 caaagatggacgactaatctggttcatgcgtagaggcatgcgcact 48342058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 24506682 - 24506718
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  24506682 cgactaatctgactcatgcgtagaggcatgtgcactg 24506718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 17642008 - 17642106
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||| | ||||| ||||||||||||||||||| ||||| ||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||    
T  17642008 cgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacc 17642105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 26325902 - 26325817
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| |||| |||||||||||  |||||||| |  ||||||||||||||||    
T  26325902 acccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaa--gtgttgttcccgctgggaatcgaacccg 26325817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 41663874 - 41663959
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| |||||||||||||||  |||||||||||||| |||| |||||||||||  |||||||| | |||||||||||||||||    
T  41663874 acccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaa--gtgttgttccccctgggaatcgaacccg 41663959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 10422872 - 10422793
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| ||||| | |||||||||||    
T  10422872 caaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttcctcctagaaatcgaacccg 10422793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 49078194 - 49078119
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||| |||||||||| ||||||||||||||| |||| |||||| ||||  |||||||||| |||||||||||||||||    
T  49078194 ggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgtttcccctgggaatcgaacccg 49078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 106
Target Start/End: Complemental strand, 5504121 - 5504070
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  5504121 acccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcact 5504070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 28324615 - 28324683
Alignment:
Q  72 gactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||| ||||||||||||||| |||| |||||||||||  |||||||||| || ||||||||||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaa--gtgttgtttccccggggaatcgaacccg 28324683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 32947 - 32876
Alignment:
Q  69 gacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||  | |||||| ||||||||||||| |||||    
T  32947 gacgactaattcggctcatgcgtagaggcatgtgcactgaccaa--gcgttgttcctcctgggaatcggacccg 32876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 33498863 - 33498942
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||  | |||| | |||||| ||||||||||||    
T  33498863 caaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgctcctcctgagaatcgaacccg 33498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 5855605 - 5855527
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||| | ||||||||||||| |||| |||||| ||||  | |||||| |||||||||||||||||||    
T  5855605 aaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctgggaatcgaacccg 5855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 8764081 - 8763996
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||||||||| ||||| ||||||||| |||| |||||| ||||  |||||||| | |||||||| ||||||||    
T  8764081 acccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaaacgaacccg 8763996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 35908838 - 35908791
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  35908838 ggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaa 35908791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 6563513 - 6563446
Alignment:
Q  73 actaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||| ||||||||||||||||||||| ||||  | |||||| | ||| |||||||||||||    
T  6563513 actaatctggctcgtgcgtagagacatgtgcactggccaa--gcgttgttccccctaggaatcgaacccg 6563446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 12036768 - 12036820
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||||||| ||||||||||| ||||||||| |||| |||||| |||||    
T  12036768 caaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaag 12036820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 45726457 - 45726534
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    |||||||| |||||||||| |||||||||||||||||||  |||||| ||||   |||| || |||||| ||||||||||    
T  45726457 caaaggtgaacgactaatccggctcatgcgtagagacatacgcactggccaa--atgttattcctcctgagaatcgaacc 45726534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 9659197 - 9659248
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    ||||| ||||||||||||||||||| |||||||||||| || |||| |||||    
T  9659197 acccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcact 9659248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 10336613 - 10336554
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||||| | ||| ||||||||||||| ||||| ||||||||||||||| |||| ||||||    
T  10336613 gttttcgatccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactg 10336554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 26258778 - 26258727
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||||||||||| ||||| | |||||||||| || |||||||||||||||||    
T  26258778 aaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaag 26258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 48761260 - 48761209
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||||||||||||||||  |||| ||||||||| ||||| ||||||||||    
T  48761260 caaaggtggacgactaatccagctcgtgcgtagaggcatgtccactgaccaa 48761209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 4581700 - 4581758
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| |||||||||||||||| || ||||| ||||||||| |||| |||||| |||||    
T  4581700 acccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 10172989 - 10173047
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| ||| ||||| ||||||||||||||| |||| |||||| |||||    
T  10172989 acccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaag 10173047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 14254286 - 14254344
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||||||||||||| |||||||||||| || |||| | |||| |||||    
T  14254286 acccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaag 14254344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 18708551 - 18708609
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    |||||| ||||| ||||||||  |||||||||||||||||| |||||| |||| |||||    
T  18708551 gttttcaacccatcaaaggtgagcgactaatctggctcatgtgtagaggcatgcgcact 18708609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 30927745 - 30927790
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  30927745 acccaccaaaagtggacgactaatccggctcatgcgtagaggcatg 30927790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 32150933 - 32151023
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    |||||| ||||| ||||||||  ||||||||  |||||||||||| || |||| |||||||||||   ||||||| | ||||| |||||||||    
T  32150933 gttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaa--atgttgttccccctggaaatcgaacc 32151023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 45361907 - 45361985
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||| |||| |||||||| | |||| |||||| ||||| ||  |||| |||||| ||||||||||||    
T  45361907 aaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgt--tgttcctcctgagaatcgaacccg 45361985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 11397907 - 11397947
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagag 95  Q
    ||||| ||||||||||||||||||| | |||||||||||||    
T  11397907 acccaccaaaggtggacgactaatccgactcatgcgtagag 11397947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 16263629 - 16263552
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    |||| ||||||||||| || |||| |||||||||| |||| |||||| ||||  | |||||| ||||||| |||||||||    
T  16263629 caaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctggaaatcgaacc 16263552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 18915941 - 18915872
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||| ||||| ||||||||| ||||  ||||| ||||||||  |||| | |||||||||||||||||    
T  18915941 cgactaatccggctcgtgcgtagaggcatgcacactggccaagtgt--tgttccccctgggaatcgaacccg 18915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 33418139 - 33418191
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||||||||||||| ||||| ||| ||||| |||| |||||| |||||    
T  33418139 caaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaag 33418191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 8513609 - 8513524
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||  |  ||||||| ||| |||||||||||||    
T  8513609 acccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaa--gcattgtttcccctaggaatcgaacccg 8513524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 9805094 - 9805009
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| |||||| ||||  | |||||| | |||||||||||||||||    
T  9805094 acccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttccccctgggaatcgaacccg 9805009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 5731944 - 5732022
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||||||||||| ||||||| |||| |||||| ||||  | |||||| |||||||||||||||||||    
T  5731944 aaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaa--gcgttgttcctcctgggaatcgaacccg 5732022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 39099796 - 39099857
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  39099796 acccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgt 39099857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 1538521 - 1538436
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||| ||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  1538521 acccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 1538436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 42086417 - 42086332
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||  |||  | |||||| | |||||||||||||||||    
T  42086417 acccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaa--gcgttgttccccctgggaatcgaacccg 42086332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 14974347 - 14974398
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  14974347 caaaggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaa 14974398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 41163463 - 41163534
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||||| | |||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  41163463 cgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaa 41163534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 7308387 - 7308466
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||  ||||||||| ||||||||||||||| ||||||||||| ||||  | |||||| | |||||||||||||||||    
T  7308387 caaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaa--gcgttgttccccctgggaatcgaacccg 7308466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 65 - 142
Target Start/End: Complemental strand, 20525918 - 20525843
Alignment:
Q  65 ggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||| ||||||||||||||| |||| |||||| | ||  |||||||| | |||||||||||||||||    
T  20525918 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaa--gtgttgttccacctgggaatcgaacccg 20525843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 23247374 - 23247453
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||||||||||||| ||||||||| ||||   ||||| |||  | |||||| |||||||||||||||||||    
T  23247374 caaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaa--gcgttgttcctcctgggaatcgaacccg 23247453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 23383761 - 23383662
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||| | ||||| |||||||||||||||||||  |||||||||||||| || | |||||| ||||  | |||||| | |||||||||||||||    
T  23383761 cgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaa--gcgttgttccccctgggaatcgaacc 23383664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 19572814 - 19572729
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| |||| |||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||| ||||||    
T  19572814 acccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatctaacccg 19572729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 42291528 - 42291580
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||    
T  42291528 caaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaag 42291580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 15034159 - 15034104
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||||| ||||||| ||||||||||||||| ||||  ||||||||||||||    
T  15034159 caaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgt 15034104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 14588640 - 14588686
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  14588640 caaaggtggacgactaatccggctcatgcgtagaggcatgcgcactg 14588686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 42861235 - 42861296
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||| ||||||||| ||||| ||||||||||||||| |||| |||||| ||||||||    
T  42861235 acccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgt 42861296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 9168264 - 9168328
Alignment:
Q  49 ttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| |||||  |||||||||||||||||| |||||||||||||||  ||| |||||| |||||    
T  9168264 ttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaag 9168328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 24875435 - 24875383
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||||||||||| ||||| ||||| |||||||||||||| ||||||    
T  24875435 acccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactg 24875383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 13664344 - 13664289
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||  ||| ||||||||||||||||||||| |||| |||||| ||||||||    
T  13664344 caaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgt 13664289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 20255453 - 20255398
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||||||||||||| | ||||||||||||| |||| ||||||  |||||||    
T  20255453 caaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgt 20255398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 12766221 - 12766163
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| |||||||||||| |||||||||||| ||||  ||||| |||||    
T  12766221 acccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaag 12766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 14728173 - 14728115
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||  | ||||||| ||||||||||||||| |||| ||||||||||||    
T  14728173 acccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaag 14728115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 28857192 - 28857133
Alignment:
Q  81 ggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  28857192 ggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 28857133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 35813021 - 35813067
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||||||||||||||||| | |||||| ||||||||||| ||||||    
T  35813021 caaaggtggacgactaatccgactcatgtgtagagacatgcgcactg 35813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 140
Target Start/End: Original strand, 22655168 - 22655257
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    |||||| ||||| ||||||||||||||||||||| || |||||||||| ||||  |||||| |||     ||||||| |||||||||||||||    
T  22655168 gttttcgaccca-caaaggtggacgactaatctgacttatgcgtagaggcatgcacactgatcaa--acattgtttcccctgggaatcgaacc 22655257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 25950605 - 25950646
Alignment:
Q  49 ttttctacccagcaaaggtggacgactaatctggctcatgcg 90  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||    
T  25950605 ttttcgacccaccaaaggtggacgactaatccggctcatgcg 25950646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 40117512 - 40117447
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||||| | ||| |||||||| |||| ||||| ||||||||||||||| |||| |||||| |||||    
T  40117512 gttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaag 40117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 7866671 - 7866586
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||||||||| || || ||||||||| ||||  ||||| ||||| ||  |||| ||||| |||||||||||||    
T  7866671 acccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgt--tgttcctcctcggaatcgaacccg 7866586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 9812962 - 9812877
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||||||||| || |||||||||||  ||||  ||||| ||||  | |||||| ||||| |||||||||||||    
T  9812962 acccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaa--gcgttgttcctcctcggaatcgaacccg 9812877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 17693371 - 17693403
Alignment:
Q  68 ggacgactaatctggctcatgcgtagagacatg 100  Q
    |||||||||||||||||||||||||||| ||||    
T  17693371 ggacgactaatctggctcatgcgtagaggcatg 17693403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 18136317 - 18136382
Alignment:
Q  75 taatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||||||| |||||| ||||  ||||||||||  |||||||| | |||||||||||||||||    
T  18136317 taatccggctcatgtgtagaggcatgcacactgaccaa--gtgttgttccccctgggaatcgaacccg 18136382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 24653822 - 24653889
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||| ||||| ||| ||||||||| ||||| |||| ||||||||||  ||| |||||||||||||||    
T  24653822 gttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactgaccaagtgt 24653889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 26423310 - 26423389
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||| |||||||||||||||| ||||||||| || |||||||| ||||  | |||||||| |||||||||||||||||    
T  26423310 caaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaa--gcgttgtttcccctgggaatcgaacccg 26423389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 5039428 - 5039517
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaac 139  Q
    |||||| | ||| ||||||||  ||||||||| |||||||||||||||  |||||||||||||||  |||||||| ||||| ||||||||||    
T  5039428 gttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaa--gtgttgttcctcctaggaatcgaac 5039517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 38578884 - 38578969
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||| ||||  | |||||| | |||||||||||||||||    
T  38578884 acccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttccccctgggaatcgaacccg 38578969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 48804775 - 48804690
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | | |||||||||||||||    
T  48804775 acccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccttgggaatcgaacccg 48804690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 1797559 - 1797467
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| | ||| ||||| |||||||||| || ||||| |||||||||||||| |||||| ||||  | |||||||| |||||||||||||||||    
T  1797559 gttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaa--gcgttgtttcccctgggaatcgaacccg 1797467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 39475039 - 39474974
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||||| |||||  |||||||||||||||||| |||||||||||||||  ||| ||||||||||||    
T  39475039 gttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaag 39474974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 13095950 - 13095865
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||  ||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | ||||||||| |||||||    
T  13095950 acccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatagaacccg 13095865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 17748399 - 17748484
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||| ||||| | ||||||| |||| |||||| ||||  | |||||| | |||||||||||||||||    
T  17748399 acccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaa--gcgttgttccccctgggaatcgaacccg 17748484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 22974059 - 22973974
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||  ||||| ||||  | |||||| | |||| ||||||||||||    
T  22974059 acccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaa--gcgttgttccccctgagaatcgaacccg 22973974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 27875098 - 27875166
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||| |||||  |||||||||||||||||  | ||||||||||||| ||||||||||| ||||||||    
T  27875098 gttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgt 27875166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 36619271 - 36619356
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| ||||  |||||  |||  |||||||| | |||||||||||||||||    
T  36619271 acccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaa--gtgttgttccccctgggaatcgaacccg 36619356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Original strand, 29805464 - 29805514
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||| ||||| |||| ||||||||||||||||||||| |||||||||||    
T  29805464 aaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaa 29805514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 43925586 - 43925519
Alignment:
Q  73 actaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||  |||||||||||||| |||| |||||||||||  |||||||| | |||||||||||||||||    
T  43925586 actaatccagctcatgcgtagaggcatgcgcactgaccaa--gtgttgttccccctgggaatcgaacccg 43925519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 38988997 - 38988932
Alignment:
Q  50 tttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtg 115  Q
    |||| ||||| ||||| ||  ||||||||| || |||||||||||| |||||||||||||||||||    
T  38988997 tttcgacccaccaaagatgagcgactaatccggttcatgcgtagaggcatgtgcactgaccaagtg 38988932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 10047893 - 10047978
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||||||||   |||||||||||||| | || |||||| ||||  |||||||| | |||||||||||||||||    
T  10047893 acccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 10047978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 41945559 - 41945507
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||||||||||||| ||||| ||||||||| |||| |||||| |||||    
T  41945559 caaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaag 41945507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 3353510 - 3353459
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||||||||||||||||| ||||| ||||||||| |||| |||||| ||||    
T  3353510 caaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaa 3353459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 4228765 - 4228828
Alignment:
Q  49 ttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||||| ||| ||||| ||||||||| ||||||||||||| | ||||||||||| ||||    
T  4228765 ttttcgacccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaa 4228828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 21530840 - 21530756
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||| ||||||||  ||| ||||  ||||| ||||||||| ||||||||||||||||  |||||||| | |||||||||| |||||    
T  21530840 acccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaa--gtgttgttccccctgggaatcaaaccc 21530756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 24983436 - 24983487
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| |||| |||||    
T  24983436 acccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 43861982 - 43862074
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||| | ||| |||||||| | |||||||| ||||||||||||||| |||| |||||| ||||    |||||| | |||||||||||||||||    
T  43861982 gttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaa--acgttgttccccctgggaatcgaacccg 43862074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 45960026 - 45960081
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||  ||||||||| |||| |||||||||| |||| |||||||||||||||    
T  45960026 caaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgt 45960081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 8734703 - 8734761
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| ||||||||||||||| ||||| ||| |||| |||||| |||||    
T  8734703 acccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaag 8734761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 19914720 - 19914778
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| ||| ||||||||||||||||||||| |||| ||| || |||||    
T  19914720 acccatcaaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaag 19914778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 34865902 - 34865955
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||||| ||||||||||||||| ||| ||||| |||||||||||| |||||||    
T  34865902 aaaggtgg-cgactaatctggctcgtgcatagaggcatgtgcactgatcaagtgt 34865955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 49142680 - 49142738
Alignment:
Q  49 ttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||| ||||||||| | ||||||| ||||| ||||||||| |||||||||||    
T  49142680 ttttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactg 49142738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 4195219 - 4195301
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaac 139  Q
    ||||| ||| |||||||| |||||| ||||||||||||||| |||| |||||  ||||   ||||||| ||||||| ||||||||    
T  4195219 acccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaa--atgttgttcctcctggaaatcgaac 4195301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 39420928 - 39420871
Alignment:
Q  56 cccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    |||| ||||||| ||||||||||| ||||||||||||||| || | |||||| |||||    
T  39420928 cccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaag 39420871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 41267941 - 41267986
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  41267941 acccatcaaaggtggacgactaatctaactcatgcgtagaggcatg 41267986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 45697207 - 45697268
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||| ||||||||||||||||| |   ||||||||||||| |||| ||||||| |||||||    
T  45697207 acccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgt 45697268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 1606027 - 1605975
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||||||| ||||||||| |||||| || ||||| ||||||||||| |||||    
T  1606027 caaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaag 1605975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 18785761 - 18785676
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| || ||||| ||||||||||  | |||||||||||| |||| |||||| ||||  |||||||| | ||| |||||||||||||    
T  18785761 acccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctaggaatcgaacccg 18785676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 21898734 - 21898656
Alignment:
Q  62 aaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| |||||||||| ||||||||||||||| |||| |||||| ||||  | |||||| |||||||||||||||||||    
T  21898734 aaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaa--gcgttgttcctcctgggaatcgaacccg 21898656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 34954636 - 34954693
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| |||||||||||||||||||||||||||||||||||  |||||||||| ||||    
T  34954636 acccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaa 34954693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 5253240 - 5253325
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||| ||| ||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  5253240 acccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 5253325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 6606114 - 6606199
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| ||||| ||||| ||||  |||||||| | |||| ||||||||||||    
T  6606114 acccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaa--gtgttgttccccctgagaatcgaacccg 6606199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 13036032 - 13036082
Alignment:
Q  66 gtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  13036032 gtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgt 13036082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 13469026 - 13468969
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    ||||| ||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  13469026 acccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaa 13468969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 2271320 - 2271372
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  2271320 acccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactg 2271372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 14107391 - 14107460
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||| ||||||||||||||| |||||||||||  |||  | |||||| |||||||||||||||||||    
T  14107391 cgactaatccggctcatgcgtagaggcatgtgcactggtcaa--gcgttgttcctcctgggaatcgaacccg 14107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 8938804 - 8938721
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||||||||||||||||  ||||||||||||||  | || ||||||  |||  |||||||| |||||||||||||||||    
T  8938804 acccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaa--gtgttgttcctcctgggaatcgaacc 8938721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 8932754 - 8932669
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||||||||  || ||||| ||||||||||||||| |||| |||||  ||||  |||||||| | |||||||||||||||||    
T  8932754 acccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaa--gtgttgttccccctgggaatcgaacccg 8932669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 8944220 - 8944135
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| |||||||||  || ||||| ||||||||||||||| |||| |||||  ||||  |||||||| | |||||||||||||||||    
T  8944220 acccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaa--gtgttgttccccctgggaatcgaacccg 8944135  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 29444768 - 29444840
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||| | ||||| ||||| ||||| ||||||| ||||||||||||||| |||| |||||| |||||    
T  29444768 cgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaag 29444840  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 3587968 - 3588047
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| ||||||||||| || ||||||||||||  |||||||||| ||||  | |||||| | | |||||||||||||||    
T  3587968 caaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaa--gcgttgttccccttgggaatcgaacccg 3588047  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 5333082 - 5333036
Alignment:
Q  70 acgactaatctggctcatgcgtagagacatgtgcactgaccaagtgt 116  Q
    ||||||||||||||||||| ||||||||||| ||||||  |||||||    
T  5333082 acgactaatctggctcatgtgtagagacatgcgcactggacaagtgt 5333036  T

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Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 19089591 - 19089508
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||| ||||  ||||| ||||  |||||||| | |||||||||| ||||    
T  19089591 acccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaa--gtgttgttccccctgggaatcaaacc 19089508  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 8149814 - 8149863
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgca 104  Q
    ||||| ||||||||||||||||||  |||| |||||||||| ||||||||    
T  8149814 acccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgca 8149863  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 9147379 - 9147309
Alignment:
Q  70 acgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    |||||||||| |||| |||||||||| |||||||||||  |||  |||| ||| | |||||||||||||||||    
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaa--gtgtcgttccccctgggaatcgaacccg 9147309  T

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Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 14783437 - 14783482
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatg 100  Q
    ||||| ||| ||||||||||||||| ||||||||||||||| ||||    
T  14783437 acccaccaatggtggacgactaatccggctcatgcgtagaggcatg 14783482  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 31129264 - 31129219
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgtgcact 106  Q
    |||||||| || ||||||||||||||||||||||| |||| |||||    
T  31129264 caaaggtgcacaactaatctggctcatgcgtagaggcatgcgcact 31129219  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 8888982 - 8888918
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||| | ||| ||||||||||||||||||| | |||||||||||||  ||| |||||| ||||    
T  8888982 gttttcgatccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaa 8888918  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 10311472 - 10311544
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||| ||||| ||| ||||  ||||||||||  ||| |||||||||||||| |||||| |||||    
T  10311472 cgcaccagttttcgacccaccaatggtgagcgactaatctaactcgtgcgtagagacatgcgcactggccaag 10311544  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 11142696 - 11142644
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    ||||| ||||| ||||| ||||||||| ||||||||||||| |||| ||||||    
T  11142696 acccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactg 11142644  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 17114920 - 17114960
Alignment:
Q  61 caaaggtggacgactaatctggctcatgcgtagagacatgt 101  Q
    ||||||||| ||||||||| ||||||||||||||| |||||    
T  17114920 caaaggtgggcgactaatccggctcatgcgtagaggcatgt 17114960  T

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Target: scaffold0291 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 6947 - 6862
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||  ||||||||| ||||||||||||||| |||| |||||| ||||  |||||||| | |||||||||||||||||    
T  6947 acccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaa--gtgttgttccccctgggaatcgaacccg 6862  T

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Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 8704 - 8803
Alignment:
Q  41 cgcacaagttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacc 140  Q
    ||||| ||||| | ||||| |||||||||||||||||||  |||||||||||||| || | |||||| ||||  | |||||| | |||||||||||||||    
T  8704 cgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaa--gcgttgttccccctgggaatcgaacc 8801  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 1624 - 1683
Alignment:
Q  48 gttttctacccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactg 107  Q
    |||||| ||||| ||||||||| |||||||| |||||||||||||||| |||| ||||||    
T  1624 gttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactg 1683  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 16971 - 16887
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaaccc 141  Q
    ||||| ||||||||  ||||||||||||||| |||||||||||||  |||||||||||  | |||||||| |||| |||| ||||||    
T  16971 acccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaa--gcgttgtttcccctgagaattgaaccc 16887  T

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Target: scaffold0341 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 18706 - 18639
Alignment:
Q  73 actaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||||||||| ||||||||||||||||||||| ||||  | |||||| | ||| |||||||||||||    
T  18706 actaatctggctcgtgcgtagagacatgtgcactggccaa--gcgttgttccccctaggaatcgaacccg 18639  T

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Target: scaffold0170 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 9937 - 9879
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| |||| |||||| |||||    
T  9937 acccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaag 9879  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 42849 - 42907
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||||||||| ||||||||| |||||||| |||||| |||| ||||||||||||    
T  42849 acccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaag 42907  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 9534 - 9495
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtaga 94  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  9534 acccaccaaaggtggacgactaatttggctcatgcgtaga 9495  T

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Target: scaffold0005 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 271107 - 271176
Alignment:
Q  71 cgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||||| | ||||| |||||||||||||| |||||||||||  | |||||| | |||||||||||||||||    
T  271107 cgactaacccggctcgtgcgtagagacatgcgcactgaccaa--gcgttgttccccctgggaatcgaacccg 271176  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 662 - 577
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 142  Q
    ||||| ||||||||  ||||||||||||||||| ||||||| ||||  |||||| |||  |||||||| | |||| ||||||||||||    
T  662 acccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaa--gtgttgttccccctgcgaatcgaacccg 577  T

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Target: scaffold0384 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 6064 - 6006
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactgaccaag 113  Q
    ||||| ||| ||||||||||||||  | ||||||||||||| ||||||||||| |||||    
T  6064 acccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaag 6006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 186594 - 186552
Alignment:
Q  70 acgactaatctggctcatgcgtagagacatgtgcactgaccaa 112  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||    
T  186594 acgactaatccggctcgtgcgtagaggcatgtgcactgaccaa 186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 224409 - 224356
Alignment:
Q  55 acccagcaaaggtggacgactaatctggctcatgcgtagagacatgtgcactga 108  Q
    ||||| ||||| ||||||||||||| ||||| |||||||||  |||||||||||    
T  224409 acccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactga 224356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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