View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11821_low_1 (Length: 1406)

Name: NF11821_low_1
Description: NF11821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11821_low_1
NF11821_low_1
[»] chr4 (37 HSPs)
chr4 (543-1189)||(13949790-13950457)
chr4 (93-436)||(13950592-13950913)
chr4 (1214-1390)||(13949485-13949660)
chr4 (948-1085)||(24929374-24929513)
chr4 (750-810)||(50606663-50606723)
chr4 (1235-1373)||(19429722-19429858)
chr4 (1032-1086)||(27043879-27043933)
chr4 (1236-1299)||(1017113-1017176)
chr4 (1240-1338)||(50298563-50298659)
chr4 (1022-1076)||(2627190-2627244)
chr4 (1030-1076)||(25885824-25885870)
chr4 (1235-1353)||(37575857-37575974)
chr4 (1030-1075)||(4071847-4071892)
chr4 (1232-1281)||(32420976-32421025)
chr4 (1033-1086)||(49219107-49219160)
chr4 (1235-1291)||(7367975-7368031)
chr4 (1230-1290)||(27123268-27123328)
chr4 (1024-1076)||(32920459-32920511)
chr4 (1030-1082)||(50681142-50681194)
chr4 (1235-1290)||(10172156-10172211)
chr4 (1324-1367)||(29467633-29467675)
chr4 (1022-1076)||(2465978-2466032)
chr4 (1030-1076)||(10192249-10192295)
chr4 (1326-1372)||(14011248-14011293)
chr4 (1030-1076)||(18630645-18630691)
chr4 (1235-1281)||(21953376-21953422)
chr4 (1030-1076)||(25434519-25434565)
chr4 (1030-1076)||(47946163-47946209)
chr4 (1036-1086)||(53294163-53294213)
chr4 (1322-1367)||(1312860-1312904)
chr4 (1324-1377)||(11158366-11158418)
chr4 (1235-1292)||(28615426-28615483)
chr4 (1230-1263)||(42403939-42403972)
chr4 (1324-1353)||(45927381-45927410)
chr4 (1145-1182)||(50746076-50746113)
chr4 (1322-1367)||(55084488-55084532)
chr4 (1022-1067)||(55437354-55437399)
[»] chr6 (23 HSPs)
chr6 (731-835)||(326043-326147)
chr6 (1030-1107)||(3785728-3785805)
chr6 (1230-1278)||(12111073-12111121)
chr6 (1030-1086)||(20671914-20671970)
chr6 (1031-1082)||(415270-415321)
chr6 (1030-1076)||(9093615-9093661)
chr6 (1030-1072)||(24836262-24836304)
chr6 (1022-1076)||(4006669-4006725)
chr6 (1322-1367)||(4420662-4420706)
chr6 (1230-1290)||(2460067-2460127)
chr6 (1305-1377)||(6647396-6647467)
chr6 (1036-1076)||(33828617-33828657)
chr6 (1238-1289)||(3738196-3738247)
chr6 (1322-1373)||(9149109-9149159)
chr6 (1322-1373)||(9177905-9177955)
chr6 (1030-1069)||(29274295-29274334)
chr6 (1032-1070)||(22742333-22742371)
chr6 (1226-1259)||(103555-103588)
chr6 (1235-1300)||(2727804-2727869)
chr6 (1031-1076)||(5550098-5550143)
chr6 (1035-1076)||(6909931-6909972)
chr6 (1234-1299)||(26559159-26559224)
chr6 (1227-1284)||(32861642-32861699)
[»] chr1 (34 HSPs)
chr1 (1236-1377)||(10199330-10199469)
chr1 (1246-1342)||(42757109-42757204)
chr1 (1235-1353)||(3597202-3597319)
chr1 (1235-1352)||(6292526-6292641)
chr1 (1030-1076)||(5421979-5422025)
chr1 (1034-1076)||(7218133-7218175)
chr1 (1322-1384)||(14629973-14630034)
chr1 (1233-1299)||(18327065-18327131)
chr1 (1034-1076)||(25006093-25006135)
chr1 (1030-1076)||(27738239-27738285)
chr1 (1030-1076)||(30371113-30371159)
chr1 (1030-1076)||(36151564-36151610)
chr1 (1034-1082)||(473133-473181)
chr1 (1235-1291)||(6659773-6659829)
chr1 (1030-1086)||(13809963-13810019)
chr1 (1030-1074)||(15360859-15360903)
chr1 (1235-1295)||(21002244-21002304)
chr1 (1022-1074)||(32435287-32435339)
chr1 (1232-1291)||(5157165-5157224)
chr1 (1032-1075)||(37841965-37842008)
chr1 (1030-1076)||(5592744-5592790)
chr1 (1030-1072)||(15477543-15477585)
chr1 (1030-1076)||(15515506-15515552)
chr1 (1035-1097)||(17269220-17269282)
chr1 (1030-1076)||(24915110-24915156)
chr1 (1030-1076)||(25479546-25479592)
chr1 (1030-1076)||(28467366-28467412)
chr1 (1236-1298)||(29723575-29723637)
chr1 (1030-1076)||(36070215-36070261)
chr1 (1030-1076)||(49517035-49517081)
chr1 (1030-1076)||(49888732-49888778)
chr1 (1230-1291)||(9602570-9602631)
chr1 (1304-1353)||(35925722-35925771)
chr1 (1030-1071)||(45990122-45990163)
[»] chr3 (37 HSPs)
chr3 (1230-1345)||(41057194-41057309)
chr3 (1235-1295)||(25459551-25459611)
chr3 (1033-1086)||(19679377-19679430)
chr3 (1238-1377)||(41644369-41644506)
chr3 (1030-1072)||(14145877-14145919)
chr3 (1030-1076)||(23315591-23315637)
chr3 (1030-1076)||(30956685-30956731)
chr3 (1030-1076)||(30972497-30972543)
chr3 (1030-1076)||(32555040-32555086)
chr3 (1030-1076)||(36139843-36139889)
chr3 (1030-1076)||(48364938-48364984)
chr3 (1239-1284)||(50760691-50760736)
chr3 (1230-1295)||(51929830-51929895)
chr3 (1032-1076)||(3467447-3467491)
chr3 (1325-1377)||(30923908-30923959)
chr3 (1235-1299)||(36189714-36189778)
chr3 (1239-1299)||(44295612-44295672)
chr3 (1030-1097)||(1816548-1816615)
chr3 (1027-1082)||(2318606-2318661)
chr3 (1128-1182)||(27795945-27796000)
chr3 (1324-1371)||(31010417-31010463)
chr3 (1328-1371)||(31710900-31710942)
chr3 (1328-1371)||(31711155-31711197)
chr3 (1030-1076)||(12923384-12923430)
chr3 (1030-1076)||(20170488-20170534)
chr3 (1030-1076)||(36101533-36101579)
chr3 (1030-1076)||(37788825-37788871)
chr3 (1311-1353)||(38318992-38319034)
chr3 (1030-1076)||(48397611-48397657)
chr3 (1235-1291)||(1288770-1288824)
chr3 (1235-1296)||(11253589-11253650)
chr3 (1035-1076)||(20257505-20257546)
chr3 (1031-1076)||(20807066-20807111)
chr3 (1030-1075)||(32703103-32703148)
chr3 (1035-1076)||(35450560-35450601)
chr3 (1230-1271)||(36887639-36887680)
chr3 (1112-1172)||(45590718-45590779)
[»] chr5 (35 HSPs)
chr5 (1245-1352)||(17258814-17258920)
chr5 (1235-1299)||(11104990-11105054)
chr5 (1030-1076)||(10272490-10272536)
chr5 (1230-1372)||(38104773-38104913)
chr5 (1242-1353)||(1899186-1899295)
chr5 (1030-1076)||(12425536-12425582)
chr5 (1235-1352)||(14331400-14331515)
chr5 (1235-1299)||(26004918-26004982)
chr5 (1322-1366)||(28413291-28413334)
chr5 (1231-1295)||(31723894-31723958)
chr5 (1030-1082)||(36539711-36539763)
chr5 (1028-1086)||(912697-912756)
chr5 (1030-1081)||(16937937-16937988)
chr5 (1022-1076)||(26209472-26209527)
chr5 (1322-1377)||(37611222-37611276)
chr5 (1322-1377)||(37787952-37788006)
chr5 (1030-1077)||(42181150-42181197)
chr5 (1030-1069)||(42569046-42569085)
chr5 (1030-1072)||(583836-583878)
chr5 (1268-1346)||(6587061-6587138)
chr5 (1322-1352)||(9106854-9106884)
chr5 (1232-1290)||(10771806-10771864)
chr5 (1322-1352)||(11615534-11615564)
chr5 (1322-1352)||(12521561-12521591)
chr5 (1030-1076)||(14295471-14295517)
chr5 (1030-1076)||(32059648-32059694)
chr5 (1304-1377)||(3280703-3280776)
chr5 (1226-1259)||(11707168-11707201)
chr5 (1227-1284)||(17368772-17368829)
chr5 (1030-1059)||(17756805-17756834)
chr5 (1030-1067)||(29116998-29117035)
chr5 (1046-1095)||(31038275-31038324)
chr5 (1046-1095)||(31047499-31047548)
chr5 (1032-1069)||(35446022-35446059)
chr5 (1230-1291)||(40335789-40335850)
[»] chr2 (35 HSPs)
chr2 (1126-1192)||(11513977-11514043)
chr2 (1030-1076)||(11513863-11513909)
chr2 (1230-1290)||(28803446-28803506)
chr2 (1030-1076)||(25609761-25609807)
chr2 (1230-1291)||(9996831-9996892)
chr2 (1230-1291)||(15370239-15370300)
chr2 (1235-1352)||(43259867-43259984)
chr2 (1028-1076)||(4090312-4090360)
chr2 (1024-1076)||(7103542-7103594)
chr2 (1235-1291)||(22878191-22878247)
chr2 (1030-1082)||(32592552-32592603)
chr2 (1030-1066)||(35459875-35459911)
chr2 (1030-1086)||(43199379-43199435)
chr2 (1032-1076)||(43199852-43199896)
chr2 (1322-1353)||(3235391-3235422)
chr2 (1240-1342)||(5902477-5902576)
chr2 (1322-1377)||(10198487-10198541)
chr2 (1033-1076)||(33944573-33944616)
chr2 (1033-1076)||(37766766-37766809)
chr2 (1115-1172)||(40667477-40667536)
chr2 (1323-1361)||(1647261-1647298)
chr2 (1030-1076)||(5043619-5043665)
chr2 (1322-1352)||(28039339-28039369)
chr2 (1030-1076)||(33942115-33942161)
chr2 (1030-1076)||(36114582-36114628)
chr2 (1030-1076)||(41851500-41851546)
chr2 (1030-1076)||(42907324-42907370)
chr2 (1035-1076)||(9750916-9750957)
chr2 (1030-1075)||(31740019-31740064)
chr2 (1324-1377)||(34652045-34652097)
chr2 (1304-1365)||(35557114-35557174)
chr2 (1112-1185)||(35713255-35713328)
chr2 (1035-1076)||(35755561-35755602)
chr2 (1028-1061)||(40808274-40808307)
chr2 (1228-1289)||(42420136-42420197)
[»] scaffold0024 (1 HSPs)
scaffold0024 (948-1086)||(27457-27597)
[»] chr8 (26 HSPs)
chr8 (1030-1075)||(3537091-3537136)
chr8 (1220-1281)||(43043771-43043832)
chr8 (1022-1097)||(6509341-6509416)
chr8 (1026-1076)||(2482826-2482876)
chr8 (1030-1076)||(34770857-34770903)
chr8 (1120-1187)||(1664444-1664512)
chr8 (1024-1076)||(2595056-2595108)
chr8 (1230-1290)||(9700095-9700155)
chr8 (1235-1295)||(10488552-10488612)
chr8 (1030-1070)||(11000626-11000666)
chr8 (1325-1377)||(43504760-43504811)
chr8 (1245-1372)||(2458497-2458622)
chr8 (1235-1298)||(7149202-7149265)
chr8 (1231-1306)||(10219005-10219080)
chr8 (1322-1377)||(20672759-20672813)
chr8 (1239-1342)||(39881646-39881748)
chr8 (1030-1076)||(2093244-2093290)
chr8 (1128-1182)||(7008682-7008736)
chr8 (1030-1076)||(12361157-12361203)
chr8 (1022-1070)||(7878551-7878600)
chr8 (1324-1377)||(8062338-8062390)
chr8 (1033-1074)||(10758317-10758358)
chr8 (1231-1260)||(12011004-12011033)
chr8 (1324-1377)||(30277254-30277306)
chr8 (1324-1353)||(31705117-31705146)
chr8 (1230-1291)||(43393688-43393749)
[»] chr7 (22 HSPs)
chr7 (1231-1299)||(3836600-3836668)
chr7 (1028-1076)||(12110323-12110371)
chr7 (1030-1076)||(946717-946763)
chr7 (1030-1076)||(1417229-1417275)
chr7 (1030-1076)||(30180016-30180062)
chr7 (1002-1085)||(30496639-30496724)
chr7 (1230-1291)||(8427106-8427167)
chr7 (1230-1378)||(12234805-12234951)
chr7 (1226-1290)||(23214949-23215013)
chr7 (1030-1086)||(30456499-30456555)
chr7 (1236-1299)||(529447-529510)
chr7 (1030-1069)||(23918922-23918961)
chr7 (1030-1096)||(5006548-5006614)
chr7 (1324-1378)||(15075094-15075147)
chr7 (1322-1352)||(26935564-26935594)
chr7 (1317-1375)||(28165102-28165159)
chr7 (1030-1076)||(45813239-45813285)
chr7 (1226-1291)||(3610652-3610717)
chr7 (1035-1076)||(18516308-18516349)
chr7 (1324-1353)||(27496416-27496445)
chr7 (1324-1353)||(27503074-27503103)
chr7 (1227-1260)||(28727676-28727709)
[»] scaffold0199 (1 HSPs)
scaffold0199 (1120-1187)||(6885-6953)
[»] scaffold0528 (1 HSPs)
scaffold0528 (1046-1095)||(1012-1061)
[»] scaffold0475 (1 HSPs)
scaffold0475 (1039-1076)||(11814-11851)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1304-1353)||(98629-98678)


Alignment Details
Target: chr4 (Bit Score: 332; Significance: 0; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 543 - 1189
Target Start/End: Complemental strand, 13950457 - 13949790
Alignment:
Q  543 aaggttatgcaagtaaagatatcaaaaagggacaagtgtaacaactagcgagcgtagcctgg------cagtaacggcgctaatactttatttaacatgt 636  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||      |||||| |||||||||||||||||||||||||    
T  13950457 aaggttatgcaagtaaagatattgaaaagggacaagtgtaaccactagcgagcctagcctgggtctggcagtaatggcgctaatactttatttaacatgt 13950358  T
Q  637 ataagaattgctaagaaagatgagtaaataaatatggacaatgtaaatagaa-------tgtggacacattgcacaaagtacnnnnnnngcagaaacaat 729  Q
    ||||||||||||||| |    |||||||||||||||| ||||||||||||||       ||||||| |||||||||||| ||       ||||||||| |    
T  13950357 ataagaattgctaagga----gagtaaataaatatgggcaatgtaaatagaagcggcattgtggacgcattgcacaaagaacaaaaaa-gcagaaacact 13950263  T
Q  730 gtacctcaaaaccacttttcaaggtatcaagttccttatccagatcattaatagactggttatatgcctgcattggtgaagactggctcgtggtgtgtat 829  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||    
T  13950262 gtacctcaaaaccactcttcaaggtatcaagttccttatccagatcattaatagactggttatatgcttgcattggtgaagactggctggttgtgtgtat 13950163  T
Q  830 ctgcaaaaattacaacaaaacagttgatgattatctcccaattcacatacagataaaaataaatattcacttctaactcctactt---------taagaa 920  Q
    |||||||||| |||||| |||||||| || ||| |||||| |||||||||||||||||||||||||||||||  |||||||| ||         ||||||    
T  13950162 ctgcaaaaataacaacagaacagttggtgcttagctcccacttcacatacagataaaaataaatattcactttaaactcctagttagtttaagttaagaa 13950063  T
Q  921 aag--aaaagacataa----cataaataggtcatgtttggttaaacaacttaactgaaggctaataacataatcacgtatcatttacgtgttaatgtatg 1014  Q
    |||  |||||| | ||    |||||||||||||||||||  |||||||||||||| || ||||| |||||| ||||  |||||||| |||||||||||||    
T  13950062 aaggaaaaagaaaaaagaaacataaataggtcatgtttgaataaacaacttaactaaacgctaagaacatagtcac--atcatttatgtgttaatgtatg 13949965  T
Q  1015 aactaactctataacaagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaactactctggagagcatatataaactgaaaac 1114  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13949964 aactaactctataacaagataaaataaagtcaaattgttttcatataagctataagttgtttgtataagctactctggagaccatatataaactgaaaac 13949865  T
Q  1115 ttattgacatgtcataagctctcttaaacatctcacaagtgcttatgcaagtagataatctgaaataaatccaat 1189  Q
    |||| ||||||| | |||| ||||||||||| ||||||||||||||| |||||||||  || |||||||||||||    
T  13949864 ttatggacatgtgacaagcactcttaaacatgtcacaagtgcttatgtaagtagatacactcaaataaatccaat 13949790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 4e-69
Query Start/End: Original strand, 93 - 436
Target Start/End: Complemental strand, 13950913 - 13950592
Alignment:
Q  93 ccttaaaaaacttgttctcctctttcctatcaaagctcaagttttcaactacttcttagttcttacaagttacaatacatttcaaactttacccagaatg 192  Q
    |||||||||||| | || ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || |    
T  13950913 ccttaaaaaactcgctcccctctttcctatcgaagctcaagttctcaactacttcttagttcttacaagttacagtacatttcaaactttacccataacg 13950814  T
Q  193 acttattgcattatgccaaagcatgccaatggattcatgctagtgtgaaaaggagtaattaaatccctttgattttacattcaatcaataccatgctaaa 292  Q
    ||||| |||||||| |||||||||||||||||||| ||||| |||||||| |||| | |||||||||||||||||||||||||| |||                
T  13950813 acttactgcattataccaaagcatgccaatggatttatgctcgtgtgaaatggagcagttaaatccctttgattttacattcaaccaa------------ 13950726  T
Q  293 cttttcacttcctccacaaatatcaacttcttactttgtaatatccttctattcctctctttccaaatcatctaagcacatacaatcaaaactatcacct 392  Q
            ||||||||||||||| |||||||||||||||||||||||||||||||||||   | |||||||| || ||||| ||||| ||||||||| ||    
T  13950725 --------ttcctccacaaatattaacttcttactttgtaatatccttctattcctctc---ctaaatcatccaaacacatccaatccaaactatcaact 13950637  T
Q  393 tca-gttccgaaatacccatcctccacaaattattccaaaatgca 436  Q
    | | ||||  || ||||  ||||||||||| |||||| |||||||    
T  13950636 tgatgttctaaactacctgtcctccacaaactattcccaaatgca 13950592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 1214 - 1390
Target Start/End: Complemental strand, 13949660 - 13949485
Alignment:
Q  1214 tccaaataaatatagagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagctt 1313  Q
    ||||||||||||||  |||| |||||||||||||||||||||  ||   |    ||||| ||||||||||||||||| |||||||| | |||| ||||||    
T  13949660 tccaaataaatatattgcctgtttggattgacttatttgagcacatatgctcaaataacaacttgtgacactgtttgtaagaacttacgaaaa-tagctt 13949562  T
Q  1314 ataacctcttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaatggcttacatttt 1390  Q
    ||| |||||||||||||||||| ||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||    
T  13949561 ataccctcttcataagctgtttacagtttatttctataaagctctctaagataagttataaaaatggcatacatttt 13949485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 948 - 1085
Target Start/End: Original strand, 24929374 - 24929513
Alignment:
Q  948 tgtttggttaaacaacttaactgaaggctaataacataatcacgtatcatttacgtgttaatgtatgaactaactctataacaa--gataaaataaagtc 1045  Q
    ||||||| |||||||||||| |||  | | ||||||||||| | |||||| ||  ||||  |||||||||||  ||||||||||  ||||||||||||||    
T  24929374 tgtttggataaacaacttaattgagtgtttataacataatctcttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtc 24929473  T
Q  1046 aaattgttttcgtatacgctataagttgtttgtataaact 1085  Q
     || ||||||| || | ||||||||||||||  |||||||    
T  24929474 taactgttttcataaaagctataagttgttttcataaact 24929513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 750 - 810
Target Start/End: Original strand, 50606663 - 50606723
Alignment:
Q  750 aaggtatcaagttccttatccagatcattaatagactggttatatgcctgcattggtgaag 810  Q
    |||||||||||||||||||||| ||| ||| |||||| |||||||| ||||||||||||||    
T  50606663 aaggtatcaagttccttatccaaatcgttactagactagttatatgtctgcattggtgaag 50606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1235 - 1373
Target Start/End: Complemental strand, 19429858 - 19429722
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgtt 1334  Q
    ||||||| ||||||||||| |||||| ||  |||||| ||| ||||| | ||||||||||| ||| ||||||  |||| || || |   |||||||||||    
T  19429858 tttggatcgacttatttgaacttatctactcgcataagcacatgtgagattgtttggaagatcttacaaaaac-agctcattacattgccataagctgtt 19429760  T
Q  1335 ttcagcttatttccataaagctctctaagataggttata 1373  Q
    |||||||||||||||| |||||||| | ||||| |||||    
T  19429759 ttcagcttatttccat-aagctctccaggatagcttata 19429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1032 - 1086
Target Start/End: Complemental strand, 27043933 - 27043879
Alignment:
Q  1032 gataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||| |||||||||    
T  27043933 gataaaataaagttaaattgttttcgtataagctataagatgtttttataaacta 27043879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1236 - 1299
Target Start/End: Complemental strand, 1017176 - 1017113
Alignment:
Q  1236 ttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||||||||||||||| ||| ||   ||||| ||||||||| |||||||||||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaactt 1017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1240 - 1338
Target Start/End: Complemental strand, 50298659 - 50298563
Alignment:
Q  1240 attgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttca 1338  Q
    ||||| |||||| |||||||| ||   ||||| ||||||||| ||||||||||| |||||  | |||||||||||| || | |||||||||||||||||    
T  50298659 attgatttattttagcttatctactgacataagcacttgtgagactgtttggaaaaactt--ataaaatagcttatgacatgttcataagctgttttca 50298563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1022 - 1076
Target Start/End: Original strand, 2627190 - 2627244
Alignment:
Q  1022 tctataacaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||| |||||||||||||||| ||||||||||||| |||| |||| |||||||||    
T  2627190 tctaaaacaagataaaataaattcaaattgttttcatatatgctaaaagttgttt 2627244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 25885824 - 25885870
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| ||||||||||||| || ||||||||||||||    
T  25885824 aagataaaataaagttaaattgttttcgtgtaagctataagttgttt 25885870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1235 - 1353
Target Start/End: Original strand, 37575857 - 37575974
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgtt 1334  Q
    |||||||||||||||||||| |||||  | ||||||| | || |||||| ||||||  |||||||    |||||| |||||||| |  ||||||| ||||    
T  37575857 tttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaactt-atgaaaataacttataacatactcataagttgtt 37575955  T
Q  1335 ttcagcttatttccataaa 1353  Q
    ||||||| |||||||||||    
T  37575956 ttcagctcatttccataaa 37575974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1030 - 1075
Target Start/End: Original strand, 4071847 - 4071892
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtt 1075  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||||    
T  4071847 aagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1232 - 1281
Target Start/End: Original strand, 32420976 - 32421025
Alignment:
Q  1232 ctatttggattgacttatttgagcttatcaacaagcataaccacttgtga 1281  Q
    ||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  32420976 ctatttggattgacttatttgagcttacctactagcataagcacttgtga 32421025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1033 - 1086
Target Start/End: Original strand, 49219107 - 49219160
Alignment:
Q  1033 ataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||  ||||||||    
T  49219107 ataaaataaagtcaaattattttcatataagctataagttgttttcataaacta 49219160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1291
Target Start/End: Original strand, 7367975 - 7368031
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||||||||||||||| ||||| ||| |||||| | ||||||| |||||||||    
T  7367975 tttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgg 7368031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1230 - 1290
Target Start/End: Original strand, 27123268 - 27123328
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    |||| |||||||| |||||||||||||||| ||| |||||||  |||||||| ||||||||    
T  27123268 gcctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttg 27123328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1024 - 1076
Target Start/End: Complemental strand, 32920511 - 32920459
Alignment:
Q  1024 tataacaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||||| |||||  || | ||||||||||||||    
T  32920511 tataacaagataaaataaagtcaaatcgttttaatagaagctataagttgttt 32920459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1082
Target Start/End: Complemental strand, 50681194 - 50681142
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataa 1082  Q
    |||||||||||| || |||||||||| ||||| |||||||||||||| |||||    
T  50681194 aagataaaataatgttaaattgtttttgtatatgctataagttgtttatataa 50681142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1235 - 1290
Target Start/End: Complemental strand, 10172211 - 10172156
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    |||||||||| ||||||||||||||| | | |||||| ||||||||| ||||||||    
T  10172211 tttggattgatttatttgagcttatctatatgcataagcacttgtgaaactgtttg 10172156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1324 - 1367
Target Start/End: Original strand, 29467633 - 29467675
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagatag 1367  Q
    |||||||||||||||||||||||||||||| ||||||| |||||    
T  29467633 cataagctgttttcagcttatttccataaa-ctctctaggatag 29467675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1022 - 1076
Target Start/End: Complemental strand, 2466032 - 2465978
Alignment:
Q  1022 tctataacaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||| | || |||| ||||||| ||||| ||||||||||||||    
T  2466032 tctataacaagataaattcaattcaatttgtttttgtataagctataagttgttt 2465978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 10192249 - 10192295
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||| |||||||||||||||||||| |||| | ||||||||||||    
T  10192249 aagatagaataaagtcaaattgttttcatataagttataagttgttt 10192295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1326 - 1372
Target Start/End: Complemental strand, 14011293 - 14011248
Alignment:
Q  1326 taagctgttttcagcttatttccataaagctctctaagataggttat 1372  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||    
T  14011293 taagctgttttcagcttatttccat-aagctctccaagatagcttat 14011248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 18630645 - 18630691
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||| | |||||| |||| ||||||||||||||    
T  18630645 aagataaaataaagtcaattggttttcatataagctataagttgttt 18630691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1235 - 1281
Target Start/End: Complemental strand, 21953422 - 21953376
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtga 1281  Q
    |||||||||||||||||||||||||| |  ||||||| |||||||||    
T  21953422 tttggattgacttatttgagcttatctagtagcataatcacttgtga 21953376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 25434565 - 25434519
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||  ||||||| |||| ||||||||||||||    
T  25434565 aagataaaataaagtcaatatgttttcatataagctataagttgttt 25434519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 47946163 - 47946209
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| |||| |||||||||||||||| ||||||| ||||||    
T  47946163 aagataaaatgaagttaaattgttttcgtataagctataaattgttt 47946209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1036 - 1086
Target Start/End: Complemental strand, 53294213 - 53294163
Alignment:
Q  1036 aaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    ||||||| | |||||||||| ||||| |||||||||||||| |||||||||    
T  53294213 aaataaatttaaattgtttttgtatatgctataagttgtttttataaacta 53294163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1322 - 1367
Target Start/End: Complemental strand, 1312904 - 1312860
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagatag 1367  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||    
T  1312904 ttcataaactgttttcagcttatttccataaa-ctctccaagatag 1312860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1377
Target Start/End: Original strand, 11158366 - 11158418
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||| ||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  11158366 cataaactgttttcagcttatttcca-caagctctctaagatagcttatgaaaa 11158418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1235 - 1292
Target Start/End: Complemental strand, 28615483 - 28615426
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgga 1292  Q
    ||||||||||||||||| || ||||| || ||||||| ||||||||| | ||||||||    
T  28615483 tttggattgacttatttaagtttatctactagcataaacacttgtgagattgtttgga 28615426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1230 - 1263
Target Start/End: Original strand, 42403939 - 42403972
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaac 1263  Q
    |||| |||||||||||||||||||||||||||||    
T  42403939 gcctgtttggattgacttatttgagcttatcaac 42403972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1353
Target Start/End: Complemental strand, 45927410 - 45927381
Alignment:
Q  1324 cataagctgttttcagcttatttccataaa 1353  Q
    ||||||||||||||||||||||||||||||    
T  45927410 cataagctgttttcagcttatttccataaa 45927381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1145 - 1182
Target Start/End: Original strand, 50746076 - 50746113
Alignment:
Q  1145 tctcacaagtgcttatgcaagtagataatctgaaataa 1182  Q
    |||||||||||||||||||||||||||| || ||||||    
T  50746076 tctcacaagtgcttatgcaagtagataaactcaaataa 50746113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1322 - 1367
Target Start/End: Original strand, 55084488 - 55084532
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagatag 1367  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  55084488 ttcataagctggtttcagcttattttcat-aagctctctaagatag 55084532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1022 - 1067
Target Start/End: Complemental strand, 55437399 - 55437354
Alignment:
Q  1022 tctataacaagataaaataaagtcaaattgttttcgtatacgctat 1067  Q
    |||||||||| |||||||||||||||||| ||||| |||| |||||    
T  55437399 tctataacaatataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 7e-28; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 7e-28
Query Start/End: Original strand, 731 - 835
Target Start/End: Complemental strand, 326147 - 326043
Alignment:
Q  731 tacctcaaaaccacttttcaaggtatcaagttccttatccagatcattaatagactggttatatgcctgcattggtgaagactggctcgtggtgtgtatc 830  Q
    ||||||||| ||||| |||||   ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || || |||||||||    
T  326147 tacctcaaagccactcttcaaatgatcaagttccttatctagatcattgatagactggttatatgcctgcattggtgaagactgactagtagtgtgtatc 326048  T
Q  831 tgcaa 835  Q
    |||||    
T  326047 tgcaa 326043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1030 - 1107
Target Start/End: Complemental strand, 3785805 - 3785728
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaactactctggagagcatatataaac 1107  Q
    ||||||||||||||| ||| |||||||||||| |||||||| ||||| | ||| ||| |||||||||| |||| ||||    
T  3785805 aagataaaataaagttaaactgttttcgtataagctataagctgtttttgtaagctattctggagagcttataaaaac 3785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1230 - 1278
Target Start/End: Complemental strand, 12111121 - 12111073
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttg 1278  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  12111121 gcctatttggattgacttatttgagcttatctactagcataagcacttg 12111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1030 - 1086
Target Start/End: Complemental strand, 20671970 - 20671914
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||||||  ||||||||    
T  20671970 aagataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaacta 20671914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1031 - 1082
Target Start/End: Original strand, 415270 - 415321
Alignment:
Q  1031 agataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataa 1082  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||| |||||    
T  415270 agataaaacaaagttaaattgttttcgtataagctataagttgtttttataa 415321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 9093661 - 9093615
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||||    
T  9093661 aagataaaataaagttaaattgttttcgtataagctataagctgttt 9093615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1072
Target Start/End: Complemental strand, 24836304 - 24836262
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagtt 1072  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  24836304 aagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1022 - 1076
Target Start/End: Original strand, 4006669 - 4006725
Alignment:
Q  1022 tctataacaa--gataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||  ||||||||||||||||||||||||  |||| ||||||||||||||    
T  4006669 tctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttt 4006725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1322 - 1367
Target Start/End: Complemental strand, 4420706 - 4420662
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagatag 1367  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||    
T  4420706 ttcataagctgttttcagcttatttccat-aagctctccaagatag 4420662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1230 - 1290
Target Start/End: Original strand, 2460067 - 2460127
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    |||| |||||||| |||||||||||||||| ||| |||||||  |||||||| ||||||||    
T  2460067 gcctgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttg 2460127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1305 - 1377
Target Start/End: Complemental strand, 6647467 - 6647396
Alignment:
Q  1305 aaatagcttataacctcttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||||||||| || | |||||||| |||||||| ||||||| ||| |||||||||||||||| |||| ||||    
T  6647467 aaatagcttatgacatgttcataagatgttttcaacttattttcat-aagctctctaagatagcttatgaaaa 6647396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1036 - 1076
Target Start/End: Original strand, 33828617 - 33828657
Alignment:
Q  1036 aaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  33828617 aaataaagtcaaattgttttcgtataagttataagttgttt 33828657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1238 - 1289
Target Start/End: Complemental strand, 3738247 - 3738196
Alignment:
Q  1238 ggattgacttatttgagcttatcaacaagcataaccacttgtgacactgttt 1289  Q
    ||||||||||||||||| ||||| || ||||||| ||||||||| |||||||    
T  3738247 ggattgacttatttgagtttatctactagcataagcacttgtgagactgttt 3738196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1373
Target Start/End: Original strand, 9149109 - 9149159
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttata 1373  Q
    ||||||| ||||||||| |||||||||||||| ||||||| |||||||||||    
T  9149109 ttcataatctgttttcaacttatttccataaa-ctctctatgataggttata 9149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1373
Target Start/End: Complemental strand, 9177955 - 9177905
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttata 1373  Q
    ||||||| ||||||||| |||||||||||||| ||||||| |||||||||||    
T  9177955 ttcataatctgttttcaacttatttccataaa-ctctctatgataggttata 9177905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1030 - 1069
Target Start/End: Complemental strand, 29274334 - 29274295
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataa 1069  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  29274334 aagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1032 - 1070
Target Start/End: Original strand, 22742333 - 22742371
Alignment:
Q  1032 gataaaataaagtcaaattgttttcgtatacgctataag 1070  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  22742333 gataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1226 - 1259
Target Start/End: Complemental strand, 103588 - 103555
Alignment:
Q  1226 tagagcctatttggattgacttatttgagcttat 1259  Q
    |||||||| |||||||||||||||||||||||||    
T  103588 tagagcctgtttggattgacttatttgagcttat 103555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1235 - 1300
Target Start/End: Original strand, 2727804 - 2727869
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttg 1300  Q
    ||||||||| ||| |||||||||||| |   |||||| ||||||||||||||||||  ||||||||    
T  2727804 tttggattggcttgtttgagcttatctaatcgcataaacacttgtgacactgtttgttagaacttg 2727869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1031 - 1076
Target Start/End: Original strand, 5550098 - 5550143
Alignment:
Q  1031 agataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||| ||||||||||||||||||| |||| |||||||| |||||    
T  5550098 agataacataaagtcaaattgttttcatataagctataagctgttt 5550143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1035 - 1076
Target Start/End: Complemental strand, 6909972 - 6909931
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| |||||||||| ||||| ||||||||||||||    
T  6909972 aaaataaagttaaattgtttttgtatatgctataagttgttt 6909931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1234 - 1299
Target Start/End: Original strand, 26559159 - 26559224
Alignment:
Q  1234 atttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||| ||||||||||| ||| | ||  |||||| || |||||| |||||||||||||||||    
T  26559159 atttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaactt 26559224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1227 - 1284
Target Start/End: Complemental strand, 32861699 - 32861642
Alignment:
Q  1227 agagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacac 1284  Q
    ||||||| ||||||||  |||||||||||||||| || || |||| ||||||||||||    
T  32861699 agagcctttttggatttgcttatttgagcttatctactagaataagcacttgtgacac 32861642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-22; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1236 - 1377
Target Start/End: Original strand, 10199330 - 10199469
Alignment:
Q  1236 ttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgca-aaaaatagcttataacctcttcataagctgtt 1334  Q
    ||||||||||||||||||||||||| || | ||||| ||||||||||||| ||||| ||||||  ||  |||||||||||| || | |||||||| ||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaact--catgaaaatagcttatgacatgttcataagttgtt 10199427  T
Q  1335 ttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||||||||||| ||| ||||||||||| |||| |||| ||||    
T  10199428 ttcagcttattttcat-aagctctctaaaatagcttatgaaaa 10199469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1246 - 1342
Target Start/End: Original strand, 42757109 - 42757204
Alignment:
Q  1246 ttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttcagctt 1342  Q
    |||||||||||| || ||  |||||||||||||||||||||||||||||||||| |  |||| | ||||| || | |||||||||||||||||||||    
T  42757109 ttatttgagcttgtctacgtgcataaccacttgtgacactgtttggaagaacttac-gaaaacaacttattacatattcataagctgttttcagctt 42757204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1235 - 1353
Target Start/End: Original strand, 3597202 - 3597319
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgtt 1334  Q
    |||||||||||||||||||| ||||| |     |||||||||||||| |||||||||||||  |||  ||||||| ||||| || |   |||||||| ||    
T  3597202 tttggattgacttatttgaggttatctaatgatataaccacttgtgagactgtttggaagag-ttgataaaaataacttatgacatggccataagctatt 3597300  T
Q  1335 ttcagcttatttccataaa 1353  Q
    |||||||||||||||||||    
T  3597301 ttcagcttatttccataaa 3597319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1235 - 1352
Target Start/End: Complemental strand, 6292641 - 6292526
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgtt 1334  Q
    |||||||||||||||||||||||||| ||   ||||| ||||| ||| | ||||||| |||| ||    |||| ||||||| || | |||||||||||||    
T  6292641 tttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggagaattt--ttaaaacagcttatgacatgttcataagctgtt 6292544  T
Q  1335 ttcagcttatttccataa 1352  Q
    |||||||||||| |||||    
T  6292543 ttcagcttattttcataa 6292526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 5422025 - 5421979
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  5422025 aagataaaatatagtcaaattgttttcttataagctataagttgttt 5421979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1034 - 1076
Target Start/End: Complemental strand, 7218175 - 7218133
Alignment:
Q  1034 taaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttt 7218133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1322 - 1384
Target Start/End: Original strand, 14629973 - 14630034
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaatggctta 1384  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||    
T  14629973 ttcataagttgttttcagcttatttccataaag-tctccaagatagcttatgaaaatagctta 14630034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1233 - 1299
Target Start/End: Original strand, 18327065 - 18327131
Alignment:
Q  1233 tatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||||| |||||||||||||||| ||   ||||| ||||| ||||||| |||||||||||||    
T  18327065 tatttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaactt 18327131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1034 - 1076
Target Start/End: Complemental strand, 25006135 - 25006093
Alignment:
Q  1034 taaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttt 25006093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 27738285 - 27738239
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  27738285 aagataaaataaagtcaaattgttttcatataagctataatttgttt 27738239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 30371113 - 30371159
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  30371113 aagataaaataaactcaaattgttttcatataagctataagttgttt 30371159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 36151610 - 36151564
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||||||||||| | ||||| ||||||    
T  36151610 aagataaaataaagtcaaattgttttcgtataagttataaattgttt 36151564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1034 - 1082
Target Start/End: Original strand, 473133 - 473181
Alignment:
Q  1034 taaaataaagtcaaattgttttcgtatacgctataagttgtttgtataa 1082  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |||||    
T  473133 taaaataaagttaaattgttttcgtgtatgctataagttgtttttataa 473181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1291
Target Start/End: Complemental strand, 6659829 - 6659773
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    ||||||||||||||||| |||||||| || ||||||| ||||||||| ||| |||||    
T  6659829 tttggattgacttattttagcttatctactagcataagcacttgtgagactatttgg 6659773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1086
Target Start/End: Original strand, 13809963 - 13810019
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    ||||||||||||||| |||||||||| ||||| ||||||  |||||| |||||||||    
T  13809963 aagataaaataaagttaaattgtttttgtatatgctatatattgtttttataaacta 13810019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1074
Target Start/End: Original strand, 15360859 - 15360903
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgt 1074  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||    
T  15360859 aagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1295
Target Start/End: Complemental strand, 21002304 - 21002244
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaaga 1295  Q
    ||||||||| |||||||||||||||| ||  ||||||  |||||||| |||||||||||||    
T  21002304 tttggattggcttatttgagcttatctacttgcataagaacttgtgagactgtttggaaga 21002244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1022 - 1074
Target Start/End: Original strand, 32435287 - 32435339
Alignment:
Q  1022 tctataacaagataaaataaagtcaaattgttttcgtatacgctataagttgt 1074  Q
    |||||||||||||| |||||| |||||||||||||||| | | ||||||||||    
T  32435287 tctataacaagatagaataaaatcaaattgttttcgtacaagttataagttgt 32435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1232 - 1291
Target Start/End: Complemental strand, 5157224 - 5157165
Alignment:
Q  1232 ctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||||||||||||||||| |||||| ||   ||||| ||||||||| |||||||||    
T  5157224 ctatttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgg 5157165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1032 - 1075
Target Start/End: Original strand, 37841965 - 37842008
Alignment:
Q  1032 gataaaataaagtcaaattgttttcgtatacgctataagttgtt 1075  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||    
T  37841965 gataaaataaagttaaattgttttcgtataagctatatgttgtt 37842008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 5592790 - 5592744
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||| ||||||| || |||| ||||||||||||||    
T  5592790 aagataaaataaagtcgaattgttgtcatataagctataagttgttt 5592744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1072
Target Start/End: Original strand, 15477543 - 15477585
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagtt 1072  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||    
T  15477543 aagataaaataaagttaaattgtttttgtatatgctataagtt 15477585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 15515506 - 15515552
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||    
T  15515506 aagatagaataaaatcaaaatgttttcgtataagctataagttgttt 15515552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1035 - 1097
Target Start/End: Original strand, 17269220 - 17269282
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaactactctggagagc 1097  Q
    |||||||||||||||||||||| |||| || |||||||||||  |||| |||  |||||||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctggagagc 17269282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 24915156 - 24915110
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  24915156 aagataaaataaagttaaattgtttttgtatatgctataagctgttt 24915110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 25479546 - 25479592
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||| |||||||||| ||| |||| ||||||||||||||    
T  25479546 aagataaaataacgtcaaattgtcttcatataggctataagttgttt 25479592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 28467412 - 28467366
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||| ||||| |||| |||| |||||||||    
T  28467412 aagataaaataaagtcaaattattttcatataagctacaagttgttt 28467366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1236 - 1298
Target Start/End: Complemental strand, 29723637 - 29723575
Alignment:
Q  1236 ttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaact 1298  Q
    ||||||||||| ||||||||||||  || ||||||| ||||||||| || ||||| |||||||    
T  29723637 ttggattgactaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaact 29723575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 36070215 - 36070261
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| ||||||| |||| ||| ||||||||||||||    
T  36070215 aagataaaataaagttaaattgtcttcggataagctataagttgttt 36070261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 49517035 - 49517081
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| | || |||||||| |||||    
T  49517035 aagataaaataaagtcaaattgttttcatttaagctataagctgttt 49517081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 49888732 - 49888778
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||  ||||||||||||||| ||||| ||||||||    
T  49888732 aagataaaataaagtttaattgttttcgtataagctattagttgttt 49888778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1230 - 1291
Target Start/End: Original strand, 9602570 - 9602631
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||||||||||||||| |||||||||| || | | ||| ||||||||| ||| |||||    
T  9602570 gcctatttggattgacttatctgagcttatctactaacttaagcacttgtgagactatttgg 9602631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1304 - 1353
Target Start/End: Complemental strand, 35925771 - 35925722
Alignment:
Q  1304 aaaatagcttataacctcttcataagctgttttcagcttatttccataaa 1353  Q
    |||| ||||||| || | ||||||||||||||||| ||||||||||||||    
T  35925771 aaaacagcttatgacatgttcataagctgttttcaacttatttccataaa 35925722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1030 - 1071
Target Start/End: Complemental strand, 45990163 - 45990122
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagt 1071  Q
    ||||||||||||||| ||||||||||| |||| |||||||||    
T  45990163 aagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 9e-18; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 9e-18
Query Start/End: Original strand, 1230 - 1345
Target Start/End: Complemental strand, 41057309 - 41057194
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataag 1329  Q
    ||||||||| |||| |||||||||||||||| ||| |||||| ||||||||| ||||||||| |||| |||  ||||||||||  | || | ||||||||    
T  41057309 gcctatttgaattggcttatttgagcttatctacatgcataagcacttgtgagactgtttgggagaatttgtgaaaaatagctcgtgacatgttcataag 41057210  T
Q  1330 ctgttttcagcttatt 1345  Q
     | |||||||||||||    
T  41057209 ttattttcagcttatt 41057194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1235 - 1295
Target Start/End: Original strand, 25459551 - 25459611
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaaga 1295  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||| | |||||||||||    
T  25459551 tttggattgatttatttgagcttatcaactagcataagcacttgtgagattgtttggaaga 25459611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1033 - 1086
Target Start/End: Complemental strand, 19679430 - 19679377
Alignment:
Q  1033 ataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    |||||||||||||||| ||||||| |||| |||||||||||||| |||||||||    
T  19679430 ataaaataaagtcaaactgttttcttataagctataagttgtttttataaacta 19679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1238 - 1377
Target Start/End: Original strand, 41644369 - 41644506
Alignment:
Q  1238 ggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttc 1337  Q
    ||||| |||| |||||||||||| || ||||||| |||||| |||||||||| | |||||||   ||||| | |||   || | ||||||||||||||||    
T  41644369 ggattaacttctttgagcttatctactagcataagcacttgagacactgtttaggagaactt-ataaaaacaacttgggacattttcataagctgttttc 41644467  T
Q  1338 agcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||||||||| | ||| |||||| ||||| |||| ||||    
T  41644468 agcttatttcc-ttaagatctctacgatagcttatgaaaa 41644506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1072
Target Start/End: Original strand, 14145877 - 14145919
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagtt 1072  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  14145877 aagataaaataaagttaaattgttttcgtatatgctataagtt 14145919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 23315591 - 23315637
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgttt 23315637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 30956731 - 30956685
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  30956731 aagataaaataaagttaaattgtttttgtataggctataagttgttt 30956685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 30972543 - 30972497
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||| ||||| ||||||||||||||    
T  30972543 aagataaaataaagttaaattgtttttgtataggctataagttgttt 30972497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 32555086 - 32555040
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  32555086 aagataaaataaagtcaaattattttcctataagctataagttgttt 32555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 36139843 - 36139889
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||    
T  36139843 aagataaaataaagtcaaactgatttcgtataagctataagttgttt 36139889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 48364984 - 48364938
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||    
T  48364984 aagataaaataaagtcaaattgttttcatttacgccataagttgttt 48364938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1239 - 1284
Target Start/End: Complemental strand, 50760736 - 50760691
Alignment:
Q  1239 gattgacttatttgagcttatcaacaagcataaccacttgtgacac 1284  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||    
T  50760736 gattgacttatttgagctcatctacaagcataagcacttgtgacac 50760691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1230 - 1295
Target Start/End: Complemental strand, 51929895 - 51929830
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaaga 1295  Q
    |||| |||||||||||||||||||||||||| |  ||||||| |||||||||  || |||||||||    
T  51929895 gcctgtttggattgacttatttgagcttatctattagcataaacacttgtgaggctatttggaaga 51929830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1032 - 1076
Target Start/End: Complemental strand, 3467491 - 3467447
Alignment:
Q  1032 gataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||| ||||  |||||||||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttgttt 3467447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1325 - 1377
Target Start/End: Original strand, 30923908 - 30923959
Alignment:
Q  1325 ataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||| ||||    
T  30923908 ataagctgttttcagcttatttctataaa-ctctctaggataggttatgaaaa 30923959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1299
Target Start/End: Complemental strand, 36189778 - 36189714
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    |||| ||||||||||||||||||||  || || |||| ||||||||| |||||||||| ||||||    
T  36189778 tttgaattgacttatttgagcttatttactagtataagcacttgtgagactgtttggaggaactt 36189714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1239 - 1299
Target Start/End: Complemental strand, 44295672 - 44295612
Alignment:
Q  1239 gattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||| |||||||||||| |||||||||| ||||||||| ||| ||||  |||||||    
T  44295672 gattgacttgtttgagcttatctacaagcataagcacttgtgatactatttgagagaactt 44295612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1030 - 1097
Target Start/End: Original strand, 1816548 - 1816615
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaactactctggagagc 1097  Q
    ||||||||||||||||||| |||||| ||||| | ||||||||||||  |||| |||  |||||||||    
T  1816548 aagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactggagagc 1816615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1027 - 1082
Target Start/End: Original strand, 2318606 - 2318661
Alignment:
Q  1027 aacaagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataa 1082  Q
    ||||||||||||| || ||||||||||||| ||||  ||||||||||||| |||||    
T  2318606 aacaagataaaatcaaatcaaattgttttcatataaactataagttgtttttataa 2318661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1128 - 1182
Target Start/End: Complemental strand, 27796000 - 27795945
Alignment:
Q  1128 ataagctctcttaaaca-tctcacaagtgcttatgcaagtagataatctgaaataa 1182  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| || ||||||    
T  27796000 ataagctctcttaaacagtttcacaagtgcttatgccagtagataagctcaaataa 27795945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1324 - 1371
Target Start/End: Complemental strand, 31010463 - 31010417
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagataggtta 1371  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||    
T  31010463 cataagctgttttcagcttaattccat-aagctctctatgataggtta 31010417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1328 - 1371
Target Start/End: Original strand, 31710900 - 31710942
Alignment:
Q  1328 agctgttttcagcttatttccataaagctctctaagataggtta 1371  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  31710900 agctgttttcagcttaattcca-aaagctctctaagataggtta 31710942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1328 - 1371
Target Start/End: Original strand, 31711155 - 31711197
Alignment:
Q  1328 agctgttttcagcttatttccataaagctctctaagataggtta 1371  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  31711155 agctgttttcagcttaattcca-aaagctctctaagataggtta 31711197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 12923430 - 12923384
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| || |||| |||| ||||||||||||||    
T  12923430 aagataaaataaagtcaaactgctttcttataagctataagttgttt 12923384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 20170488 - 20170534
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||| || |||||||||| ||||| ||||||||||||||    
T  20170488 aagataaaataatgttaaattgtttttgtatatgctataagttgttt 20170534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 36101533 - 36101579
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| || |||||||||  |||||||||||||    
T  36101533 aagataaaataaagtcaaactgatttcgtataatctataagttgttt 36101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 37788825 - 37788871
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||| |||| ||||||||||  |||||||||||||    
T  37788825 aagataaaataaagtccaattattttcgtataatctataagttgttt 37788871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1311 - 1353
Target Start/End: Complemental strand, 38319034 - 38318992
Alignment:
Q  1311 cttataacctcttcataagctgttttcagcttatttccataaa 1353  Q
    |||||||| | |||||||||| |||||||||||||||||||||    
T  38319034 cttataacatgttcataagctattttcagcttatttccataaa 38318992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 48397611 - 48397657
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||  | || ||||||||||||||    
T  48397611 aagataaaataaagtcaaattgtttttatttaagctataagttgttt 48397657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1235 - 1291
Target Start/End: Original strand, 1288770 - 1288824
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||||||||||||||||||||||||  |||||| |||  |||| |||||||||    
T  1288770 tttggattgacttatttgagcttatcaactggcataagcac--gtgagactgtttgg 1288824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1235 - 1296
Target Start/End: Complemental strand, 11253650 - 11253589
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaa 1296  Q
    |||| ||||||||||||||| ||||| || ||||||| |||||| || ||||||||| ||||    
T  11253650 tttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaa 11253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1035 - 1076
Target Start/End: Original strand, 20257505 - 20257546
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| |||||||||| ||||| ||||||||||||||    
T  20257505 aaaataaagttaaattgtttttgtatatgctataagttgttt 20257546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1031 - 1076
Target Start/End: Original strand, 20807066 - 20807111
Alignment:
Q  1031 agataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||||    
T  20807066 agataaatcaaagtcaaactgttttcgtataagctataagttgttt 20807111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1030 - 1075
Target Start/End: Original strand, 32703103 - 32703148
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtt 1075  Q
    ||||||||||||| ||||||||||||| |||| ||||||| |||||    
T  32703103 aagataaaataaactcaaattgttttcatataagctataaattgtt 32703148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1035 - 1076
Target Start/End: Original strand, 35450560 - 35450601
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| ||||||||||| |||| ||||||||||||||    
T  35450560 aaaataaagtaaaattgttttcttataagctataagttgttt 35450601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1230 - 1271
Target Start/End: Complemental strand, 36887680 - 36887639
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataa 1271  Q
    |||||||| ||||| |||||||||||||||| ||||||||||    
T  36887680 gcctatttagattggcttatttgagcttatctacaagcataa 36887639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1112 - 1172
Target Start/End: Original strand, 45590718 - 45590779
Alignment:
Q  1112 aacttattgacatgtcataagctctcttaaaca-tctcacaagtgcttatgcaagtagataa 1172  Q
    ||||||| ||| | ||||||||||||  ||||| |||||||||||||||||| |||||||||    
T  45590718 aacttatggacttatcataagctctcccaaacagtctcacaagtgcttatgctagtagataa 45590779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1245 - 1352
Target Start/End: Original strand, 17258814 - 17258920
Alignment:
Q  1245 cttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttcagcttat 1344  Q
    ||||||||||||||||||| | ||||| ||||||||||| | ||||| ||||| |    |||||||||||| || | |||||||||||||||||||||||    
T  17258814 cttatttgagcttatcaactaacataagcacttgtgacattctttgggagaacct-atgaaaatagcttatgacatgttcataagctgttttcagcttat 17258912  T
Q  1345 ttccataa 1352  Q
    || |||||    
T  17258913 tttcataa 17258920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1235 - 1299
Target Start/End: Complemental strand, 11105054 - 11104990
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||| ||| ||||| |||||||    
T  11105054 tttggattgatttatttgagcttatcaaccagcataagcacttgtgatactatttgggagaactt 11104990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 10272536 - 10272490
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  10272536 aagataaaattaagtcaaattgttttcgtataagctataagttgttt 10272490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1230 - 1372
Target Start/End: Original strand, 38104773 - 38104913
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataag 1329  Q
    |||| ||||||||  ||||||| |||||||||||    |||  ||||||||||||||||||| ||||||| ||||||   ||| || || |  | |||||    
T  38104773 gcctgtttggatttgcttatttaagcttatcaactgatataggcacttgtgacactgtttgggagaacttacaaaaacaggct-atgacttgcttataag 38104871  T
Q  1330 ctgttttcagcttatttccataaagctctctaagataggttat 1372  Q
     |||||||||||||||||||| |||||||||||||||| ||||    
T  38104872 ttgttttcagcttatttccat-aagctctctaagatagcttat 38104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1242 - 1353
Target Start/End: Complemental strand, 1899295 - 1899186
Alignment:
Q  1242 tgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttcagct 1341  Q
    ||||||||||||||||||  || ||||||| ||  ||||| ||||||| ||||| ||| ||||| |  |||||| || | | |||||| |||||||||||    
T  1899295 tgacttatttgagcttatttactagcataaacatatgtgagactgttttgaagagcttacaaaaca--gcttatgacatgtgcataagttgttttcagct 1899198  T
Q  1342 tatttccataaa 1353  Q
    ||||||||||||    
T  1899197 tatttccataaa 1899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 12425536 - 12425582
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||||    
T  12425536 aagataaaataaagttaaattgttttcgtataagctataagctgttt 12425582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1235 - 1352
Target Start/End: Complemental strand, 14331515 - 14331400
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgtt 1334  Q
    |||||||||||||||||||||||||| ||   ||||| ||||  ||| | ||||||||| |||||  | |||| ||||||| || | | ||||||||| |    
T  14331515 tttggattgacttatttgagcttatctactgtcataagcactcttgagattgtttggaaaaactt--acaaaacagcttatgacatgtccataagctgat 14331418  T
Q  1335 ttcagcttatttccataa 1352  Q
    |||||||||||| |||||    
T  14331417 ttcagcttattttcataa 14331400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1299
Target Start/End: Original strand, 26004918 - 26004982
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||||||||||| |||||||| || ||||||| ||||||| | |||| |||||| |||||    
T  26004918 tttggattgacttattttagcttatctactagcataagcacttgtcaaactgcttggaaaaactt 26004982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1322 - 1366
Target Start/End: Original strand, 28413291 - 28413334
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagata 1366  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  28413291 ttcataagctgttttcagcttatttccataaa-ctctccaagata 28413334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1231 - 1295
Target Start/End: Complemental strand, 31723958 - 31723894
Alignment:
Q  1231 cctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaaga 1295  Q
    |||||||||||||||||||||||||||||  || ||||||| ||||| ||| ||| |||| ||||    
T  31723958 cctatttggattgacttatttgagcttatgtactagcataaacacttatgagactatttgtaaga 31723894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1082
Target Start/End: Original strand, 36539711 - 36539763
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataa 1082  Q
    ||||||||||||||||||  ||||||| |||| |||||||||||||| |||||    
T  36539711 aagataaaataaagtcaacctgttttcatataagctataagttgtttttataa 36539763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1028 - 1086
Target Start/End: Complemental strand, 912756 - 912697
Alignment:
Q  1028 acaagataaaataaagtcaaa-ttgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    |||| |||||||||||||||| |||||||| |||| || ||||||||||| |||||||||    
T  912756 acaatataaaataaagtcaaaattgttttcatataagcaataagttgtttttataaacta 912697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1030 - 1081
Target Start/End: Complemental strand, 16937988 - 16937937
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtata 1081  Q
    |||||||||||| || |||||||||| ||||| |||||||||||||| ||||    
T  16937988 aagataaaataacgttaaattgtttttgtatatgctataagttgtttttata 16937937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1022 - 1076
Target Start/End: Complemental strand, 26209527 - 26209472
Alignment:
Q  1022 tctataacaagataaaataaagtcaaattgttttc-gtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||| ||||||||||  |||| |||||||| |||||    
T  26209527 tctataacaagataaaataaagtccaattgttttcaatataagctataagctgttt 26209472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1377
Target Start/End: Original strand, 37611222 - 37611276
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||| |||| ||||    
T  37611222 ttcataagctgttttcaggttatttccat-aagctctccaagatagcttatgaaaa 37611276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1377
Target Start/End: Original strand, 37787952 - 37788006
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||||||||||||||||| |||||||||| |||||||| ||||||| |||| ||||    
T  37787952 ttcataagctgttttcaggttatttccat-aagctctccaagatagcttatgaaaa 37788006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1030 - 1077
Target Start/End: Complemental strand, 42181197 - 42181150
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttg 1077  Q
    ||||||||| |||||||||| |||||| |||| |||||||||||||||    
T  42181197 aagataaaacaaagtcaaatggttttcatataagctataagttgtttg 42181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1030 - 1069
Target Start/End: Complemental strand, 42569085 - 42569046
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataa 1069  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  42569085 aagataaaataaagtctaattgttttcgtataagctataa 42569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1072
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagtt 1072  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1268 - 1346
Target Start/End: Original strand, 6587061 - 6587138
Alignment:
Q  1268 ataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttcagcttattt 1346  Q
    ||||| |||||| | |||||||||||||||||  |||||| ||||||| ||   |||||||||||||| ||||||||||    
T  6587061 ataactacttgttaaactgtttggaagaactta-aaaaaacagcttatgacaggttcataagctgtttacagcttattt 6587138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1322 - 1352
Target Start/End: Complemental strand, 9106884 - 9106854
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataa 1352  Q
    |||||||||||||||||||||||||||||||    
T  9106884 ttcataagctgttttcagcttatttccataa 9106854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1232 - 1290
Target Start/End: Original strand, 10771806 - 10771864
Alignment:
Q  1232 ctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    |||||||||||| |||||||||||||||| ||  |||||| ||||||||| | ||||||    
T  10771806 ctatttggattggcttatttgagcttatctactggcataagcacttgtgagattgtttg 10771864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1322 - 1352
Target Start/End: Complemental strand, 11615564 - 11615534
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataa 1352  Q
    |||||||||||||||||||||||||||||||    
T  11615564 ttcataagctgttttcagcttatttccataa 11615534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1322 - 1352
Target Start/End: Complemental strand, 12521591 - 12521561
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataa 1352  Q
    |||||||||||||||||||||||||||||||    
T  12521591 ttcataagctgttttcagcttatttccataa 12521561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 14295471 - 14295517
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| ||||||| |||| |||||||| |||||    
T  14295471 aagataaaataaagtcaaactgttttcatataagctataagctgttt 14295517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 32059694 - 32059648
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| ||||||| |||| |||||||| |||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgttt 32059648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1304 - 1377
Target Start/End: Original strand, 3280703 - 3280776
Alignment:
Q  1304 aaaatagcttataacctcttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||| ||||||| || |||||||||||| |||| || |||||| ||||||| |||| ||||||| |||| ||||    
T  3280703 aaaacagcttatgacatcttcataagctctttttagtttattttcataaagttctcaaagatagcttatgaaaa 3280776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1226 - 1259
Target Start/End: Complemental strand, 11707201 - 11707168
Alignment:
Q  1226 tagagcctatttggattgacttatttgagcttat 1259  Q
    |||||||| |||||||||||||||||||||||||    
T  11707201 tagagcctgtttggattgacttatttgagcttat 11707168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1227 - 1284
Target Start/End: Complemental strand, 17368829 - 17368772
Alignment:
Q  1227 agagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacac 1284  Q
    ||||||| ||||||||||||||||| | |||||| ||  |||||| ||||||||||||    
T  17368829 agagcctgtttggattgacttatttaaacttatctactggcataagcacttgtgacac 17368772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1030 - 1059
Target Start/End: Complemental strand, 17756834 - 17756805
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgta 1059  Q
    ||||||||||||||||||||||||||||||    
T  17756834 aagataaaataaagtcaaattgttttcgta 17756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1030 - 1067
Target Start/End: Complemental strand, 29117035 - 29116998
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctat 1067  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  29117035 aagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1046 - 1095
Target Start/End: Original strand, 31038275 - 31038324
Alignment:
Q  1046 aaattgttttcgtatacgctataagttgtttgtataaactactctggaga 1095  Q
    |||||||||||||||| ||||||||||||||  |||||||| | ||||||    
T  31038275 aaattgttttcgtatatgctataagttgtttccataaactattttggaga 31038324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1046 - 1095
Target Start/End: Original strand, 31047499 - 31047548
Alignment:
Q  1046 aaattgttttcgtatacgctataagttgtttgtataaactactctggaga 1095  Q
    |||||||||||||||| ||||||||||||||  |||||||| | ||||||    
T  31047499 aaattgttttcgtatatgctataagttgtttccataaactattttggaga 31047548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1032 - 1069
Target Start/End: Original strand, 35446022 - 35446059
Alignment:
Q  1032 gataaaataaagtcaaattgttttcgtatacgctataa 1069  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  35446022 gataaaataaagttaaattgtttttgtatacgctataa 35446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1230 - 1291
Target Start/End: Original strand, 40335789 - 40335850
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||| |||||||||||||||||||| ||||| ||  ||| || ||||||||| |||||||||    
T  40335789 gcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgagactgtttgg 40335850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000005; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1126 - 1192
Target Start/End: Original strand, 11513977 - 11514043
Alignment:
Q  1126 tcataagctctcttaaaca-tctcacaagtgcttatgcaagtagataatctgaaataaatccaatcca 1192  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  11513977 tcataagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaa-ccaatcca 11514043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 11513863 - 11513909
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  11513863 aagataaaataaagtcaaattgttttcatataagctataagttgttt 11513909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1230 - 1290
Target Start/End: Original strand, 28803446 - 28803506
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    ||||||||||||||||||||||||||||||| ||  |||||| ||| ||||| ||||||||    
T  28803446 gcctatttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttg 28803506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 25609761 - 25609807
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||| || |||||||||| ||||||||||||||    
T  25609761 aagataaaataaagtcaatttattttcgtataagctataagttgttt 25609807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1230 - 1291
Target Start/End: Complemental strand, 9996892 - 9996831
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||| ||||| ||||||||||||||||||||||| |||||||  |||||||| |||| ||||    
T  9996892 gcctgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgg 9996831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1230 - 1291
Target Start/End: Original strand, 15370239 - 15370300
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||| |||||||||||||||||||||||||| ||  |||||| || |||||| |||||||||    
T  15370239 gcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttgg 15370300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1235 - 1352
Target Start/End: Complemental strand, 43259984 - 43259867
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgtt 1334  Q
    ||||||||| ||||||||| |||||| || ||||||| ||||||||||| |||| || | |||||   |||||||||   |  | | || ||||||||||    
T  43259984 tttggattggcttatttgaacttatctactagcataagcacttgtgacaatgttcgggaaaacttatgaaaaatagccactgccatattaataagctgtt 43259885  T
Q  1335 ttcagcttatttccataa 1352  Q
    || |||||||||||||||    
T  43259884 tttagcttatttccataa 43259867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1028 - 1076
Target Start/End: Original strand, 4090312 - 4090360
Alignment:
Q  1028 acaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||||||  |||||  |||||||||||||    
T  4090312 acaagataaaataaagtcaaattgtttcggtataatctataagttgttt 4090360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1024 - 1076
Target Start/End: Complemental strand, 7103594 - 7103542
Alignment:
Q  1024 tataacaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||| ||||||  |||| |||||||| |||||    
T  7103594 tataacaagataaaataaagtcaaactgttttaatataagctataagctgttt 7103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1291
Target Start/End: Complemental strand, 22878247 - 22878191
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||||||||||||||||||||| ||   ||||| ||||||||| |||||||||    
T  22878247 tttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgg 22878191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1082
Target Start/End: Original strand, 32592552 - 32592603
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataa 1082  Q
    |||||||||||| || |||||||||| |||||||||||||||||||| |||||    
T  32592552 aagataaaataatgttaaattgtttt-gtatacgctataagttgtttttataa 32592603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1066
Target Start/End: Original strand, 35459875 - 35459911
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgcta 1066  Q
    |||||||||||||||||||||||||||||||| ||||    
T  35459875 aagataaaataaagtcaaattgttttcgtataagcta 35459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1086
Target Start/End: Original strand, 43199379 - 43199435
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    ||||||||||||||| ||||| | |||||||| ||||||||||||||  ||||||||    
T  43199379 aagataaaataaagttaaattatcttcgtataagctataagttgttttcataaacta 43199435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1032 - 1076
Target Start/End: Complemental strand, 43199896 - 43199852
Alignment:
Q  1032 gataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||    
T  43199896 gataaaataaagttaaattgtttttgtataagctataagttgttt 43199852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1353
Target Start/End: Original strand, 3235391 - 3235422
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaa 1353  Q
    ||||||||||||||||||||||||||||||||    
T  3235391 ttcataagctgttttcagcttatttccataaa 3235422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1240 - 1342
Target Start/End: Original strand, 5902477 - 5902576
Alignment:
Q  1240 attgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttcag 1339  Q
    |||||||||||||| |||||| |   |||||| ||||||||| |||||||||||||||||    |||| ||||||| || | ||||||| ||||||||||    
T  5902477 attgacttatttgaacttatctag--gcataaacacttgtgagactgtttggaagaactt-atgaaaacagcttatgacatgttcataaactgttttcag 5902573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1377
Target Start/End: Original strand, 10198487 - 10198541
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||||||||||| ||||||||||||||| || ||||||| ||||| |||||||||    
T  10198487 ttcataagctgttgtcagcttatttccat-aatctctctaggatagattataaaaa 10198541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1033 - 1076
Target Start/End: Original strand, 33944573 - 33944616
Alignment:
Q  1033 ataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    
T  33944573 ataaaataaagtcaaattgttttcatataagctataaattgttt 33944616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1033 - 1076
Target Start/End: Original strand, 37766766 - 37766809
Alignment:
Q  1033 ataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||| ||||||||||||  |||||||||||||    
T  37766766 ataaaataaagtcaaaatgttttcgtataaactataagttgttt 37766809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1115 - 1172
Target Start/End: Original strand, 40667477 - 40667536
Alignment:
Q  1115 ttattgacatgtcataagctctcttaaac-atctcacaagtgcttatg-caagtagataa 1172  Q
    ||||||||||||||||||||||   |||| |||||||||||||||||| |||||||||||    
T  40667477 ttattgacatgtcataagctcttccaaacaatctcacaagtgcttatgccaagtagataa 40667536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1323 - 1361
Target Start/End: Complemental strand, 1647298 - 1647261
Alignment:
Q  1323 tcataagctgttttcagcttatttccataaagctctcta 1361  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  1647298 tcataagctgttttcagcttatttccat-aagctctcta 1647261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 5043665 - 5043619
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| ||||||| |||| |||| |||||||||    
T  5043665 aagataaaataaagtcaaactgttttcatataagctagaagttgttt 5043619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1322 - 1352
Target Start/End: Original strand, 28039339 - 28039369
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataa 1352  Q
    |||||||||||||||||||||||||||||||    
T  28039339 ttcataagctgttttcagcttatttccataa 28039369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 33942115 - 33942161
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||| ||||||| | || ||||||||||||||    
T  33942115 aagataaaataaagtcaaactgttttcatgtaagctataagttgttt 33942161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 36114628 - 36114582
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||| ||||| || |||||||||||    
T  36114628 aagataaaataaagttaaattgtttttgtataagcaataagttgttt 36114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 41851500 - 41851546
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||| |||||||| |||||||||| ||||| ||||||||||||||    
T  41851500 aagatacaataaagttaaattgtttttgtatatgctataagttgttt 41851546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 42907324 - 42907370
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||| |||||||||| ||||||||||||| || ||||||||||||||    
T  42907324 aagaaaaaataaagttaaattgttttcgtttaagctataagttgttt 42907370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1035 - 1076
Target Start/End: Original strand, 9750916 - 9750957
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| ||||||||||| |||| ||||||||||||||    
T  9750916 aaaataaagttaaattgttttcttataagctataagttgttt 9750957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1030 - 1075
Target Start/End: Complemental strand, 31740064 - 31740019
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtt 1075  Q
    ||||||||||||||||||| | ||||| |||| |||||||||||||    
T  31740064 aagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1377
Target Start/End: Original strand, 34652045 - 34652097
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||| |||| ||||    
T  34652045 cataagctgttttcaacttatttccat-aagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1304 - 1365
Target Start/End: Original strand, 35557114 - 35557174
Alignment:
Q  1304 aaaatagcttataacctcttcataagctgttttcagcttatttccataaagctctctaagat 1365  Q
    |||||||||||| || | |||||||||||||||| ||||||||  ||||| |||||||||||    
T  35557114 aaaatagcttatgacatgttcataagctgttttctgcttatttatataaa-ctctctaagat 35557174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1112 - 1185
Target Start/End: Original strand, 35713255 - 35713328
Alignment:
Q  1112 aacttattgacatgtcataagctctcttaaacatctcacaagtgcttatgcaagtagataatctgaaataaatc 1185  Q
    ||||||| ||||||| |||||||||  |||   ||||||||||| |||||||||||||| | || |||||||||    
T  35713255 aacttatggacatgttataagctcttctaacagtctcacaagtgtttatgcaagtagattagctcaaataaatc 35713328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1035 - 1076
Target Start/End: Complemental strand, 35755602 - 35755561
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||| | || ||||||||||||||    
T  35755602 aaaataaagtcaaattgttttcatgtaagctataagttgttt 35755561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1028 - 1061
Target Start/End: Complemental strand, 40808307 - 40808274
Alignment:
Q  1028 acaagataaaataaagtcaaattgttttcgtata 1061  Q
    |||||||||||||||||||||||||||| |||||    
T  40808307 acaagataaaataaagtcaaattgtttttgtata 40808274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1228 - 1289
Target Start/End: Original strand, 42420136 - 42420197
Alignment:
Q  1228 gagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgttt 1289  Q
    |||||| |||||||||||||| |||||| |||| || ||||||| | ||||||||| |||||    
T  42420136 gagcctgtttggattgacttacttgagcatatccactagcataagcccttgtgacattgttt 42420197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 948 - 1086
Target Start/End: Original strand, 27457 - 27597
Alignment:
Q  948 tgtttggttaaacaacttaactgaaggctaataacataatcacgtatcatttacgtgttaatgtatgaactaactctataaca--agataaaataaagtc 1045  Q
    ||||||| |||||||||||| | || ||| ||| ||||| | | |||||| || ||| | |||||| |  ||  |||||||||  |||||||||||||||    
T  27457 tgtttggataaacaacttaaataaacgcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtc 27556  T
Q  1046 aaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    ||||||||||| ||||  |||||||||||||  ||||||||    
T  27557 aaattgttttcatataaactataagttgttttcataaacta 27597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000009; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1030 - 1075
Target Start/End: Complemental strand, 3537136 - 3537091
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtt 1075  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||    
T  3537136 aagataaaataaagtcaaattgttttcgtataagctataggttgtt 3537091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1220 - 1281
Target Start/End: Complemental strand, 43043832 - 43043771
Alignment:
Q  1220 taaatatagagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtga 1281  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||  |||||| |||||||||    
T  43043832 taaacatagagcctgtttggattgacttgtttgagcttatcaactggcataagcacttgtga 43043771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1022 - 1097
Target Start/End: Complemental strand, 6509416 - 6509341
Alignment:
Q  1022 tctataacaagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaactactctggagagc 1097  Q
    ||||||||||||||||||||||||||||||| ||  |||| |||||||| |||||  |||| |||  |||||||||    
T  6509416 tctataacaagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatcctggagagc 6509341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1026 - 1076
Target Start/End: Original strand, 2482826 - 2482876
Alignment:
Q  1026 taacaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||| |||||    
T  2482826 taacaagataaaataaagtcaaaatgtttttgtataagctataagctgttt 2482876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 34770857 - 34770903
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||    
T  34770857 aagataaaataaagtcaaattgttttcatttaagctataagttgttt 34770903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1120 - 1187
Target Start/End: Original strand, 1664444 - 1664512
Alignment:
Q  1120 gacatgtcataagctctcttaaaca-tctcacaagtgcttatgcaagtagataatctgaaataaatcca 1187  Q
    ||||||||||||||||||  ||||| ||||||||||| |||||| ||||||||| || |||||| ||||    
T  1664444 gacatgtcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagtcca 1664512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1024 - 1076
Target Start/End: Complemental strand, 2595108 - 2595056
Alignment:
Q  1024 tataacaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||| ||||||||||||||   || |||||||||||    
T  2595108 tataacaagataaaataaagttaaattgttttcgtactagccataagttgttt 2595056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1230 - 1290
Target Start/End: Complemental strand, 9700155 - 9700095
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    |||| |||||||| ||||||||||||||||| || ||||||| ||||||||| ||| ||||    
T  9700155 gcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttg 9700095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1235 - 1295
Target Start/End: Complemental strand, 10488612 - 10488552
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaaga 1295  Q
    ||||||||| ||||||||||||||||||| | ||||| ||| ||||| |||||| ||||||    
T  10488612 tttggattggcttatttgagcttatcaactaacataaacacatgtgagactgttcggaaga 10488552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1070
Target Start/End: Complemental strand, 11000666 - 11000626
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataag 1070  Q
    |||||||||||||||||||||||||||| ||| ||||||||    
T  11000666 aagataaaataaagtcaaattgttttcgaataagctataag 11000626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1325 - 1377
Target Start/End: Complemental strand, 43504811 - 43504760
Alignment:
Q  1325 ataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||||||||||||||||||||||||| ||| |||| ||||||| |||||||||    
T  43504811 ataagctgttttcagcttatttccat-aagttctccaagatagcttataaaaa 43504760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1245 - 1372
Target Start/End: Original strand, 2458497 - 2458622
Alignment:
Q  1245 cttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttcagcttat 1344  Q
    ||||||||||||||||||| || || | ||||||||||| | ||| | |||||||   || |  |||||||  | | |||||||||||||||||| ||||    
T  2458497 cttatttgagcttatcaactaggatgaacacttgtgacattcttttggagaacttatgaagac-agcttatggcatgttcataagctgttttcagtttat 2458595  T
Q  1345 ttccataaagctctctaagataggttat 1372  Q
    |||||| |||||||||| ||||| ||||    
T  2458596 ttccat-aagctctctaggatagcttat 2458622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1235 - 1298
Target Start/End: Complemental strand, 7149265 - 7149202
Alignment:
Q  1235 tttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaact 1298  Q
    |||| |||||||||||||| ||||||||| |||  || ||||||||| |||||||||| |||||    
T  7149265 tttgaattgacttatttgaacttatcaactagcgaaaacacttgtgaaactgtttggatgaact 7149202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1231 - 1306
Target Start/End: Complemental strand, 10219080 - 10219005
Alignment:
Q  1231 cctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaa 1306  Q
    |||||||||||||  |||||||||||||| | |  |||||| |||||||||  |||||| |||||||||| |||||    
T  10219080 cctatttggattggtttatttgagcttattacctggcataagcacttgtgaggctgtttagaagaacttgtaaaaa 10219005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1322 - 1377
Target Start/End: Complemental strand, 20672813 - 20672759
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    ||||||||||||||||||||||||| ||| |||||||| | ||||| |||||||||    
T  20672813 ttcataagctgttttcagcttattttcat-aagctctccaggatagcttataaaaa 20672759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1239 - 1342
Target Start/End: Original strand, 39881646 - 39881748
Alignment:
Q  1239 gattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataagctgttttca 1338  Q
    ||||||||||||||| |||||| |   |||||| ||||||||| | ||||||||||| ||||   |||||||||||| || | ||||||| | |||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgagattgtttggaagagcttg-tgaaaatagcttatgacatgttcataaacagttttca 39881744  T
Q  1339 gctt 1342  Q
    ||||    
T  39881745 gctt 39881748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 2093244 - 2093290
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||| |||||| | || ||||||||||||||    
T  2093244 aagataaaataaagtcaaatggttttcttttaagctataagttgttt 2093290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1128 - 1182
Target Start/End: Original strand, 7008682 - 7008736
Alignment:
Q  1128 ataagctctcttaaacatctcacaagtgcttatgcaagtagataatctgaaataa 1182  Q
    |||||||||||  ||| |||||||||||||||||| ||||||||| || ||||||    
T  7008682 ataagctctctctaacgtctcacaagtgcttatgccagtagataaactcaaataa 7008736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 12361157 - 12361203
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||| |||||||||||||||| |||| |||||||| |||||    
T  12361157 aagataaaatgaagtcaaattgttttcatataagctataagctgttt 12361203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1022 - 1070
Target Start/End: Complemental strand, 7878600 - 7878551
Alignment:
Q  1022 tctataacaaga-taaaataaagtcaaattgttttcgtatacgctataag 1070  Q
    |||||||||||  ||||||||||||||||||||||| |||| ||||||||    
T  7878600 tctataacaagtgtaaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1377
Target Start/End: Complemental strand, 8062390 - 8062338
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||||| |||||||||||||||||||| || ||||||||||||| |||| ||||    
T  8062390 cataagatgttttcagcttatttccat-aatctctctaagatagcttatgaaaa 8062338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1033 - 1074
Target Start/End: Complemental strand, 10758358 - 10758317
Alignment:
Q  1033 ataaaataaagtcaaattgttttcgtatacgctataagttgt 1074  Q
    |||||||||||| |||||||||| ||||| ||||||||||||    
T  10758358 ataaaataaagttaaattgtttttgtatatgctataagttgt 10758317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1231 - 1260
Target Start/End: Complemental strand, 12011033 - 12011004
Alignment:
Q  1231 cctatttggattgacttatttgagcttatc 1260  Q
    ||||||||||||||||||||||||||||||    
T  12011033 cctatttggattgacttatttgagcttatc 12011004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1377
Target Start/End: Original strand, 30277254 - 30277306
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagataggttataaaaa 1377  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| |||| ||||    
T  30277254 cataagttgttttcagcttatttccataaa-ctctctaggatagcttatgaaaa 30277306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1353
Target Start/End: Complemental strand, 31705146 - 31705117
Alignment:
Q  1324 cataagctgttttcagcttatttccataaa 1353  Q
    ||||||||||||||||||||||||||||||    
T  31705146 cataagctgttttcagcttatttccataaa 31705117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1230 - 1291
Target Start/End: Original strand, 43393688 - 43393749
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||||||||||||||||| |||||||| ||  ||| || ||||| ||| |||||||||    
T  43393688 gcctatttggattgacttatttaagcttatctacttgcaaaaacacttttgagactgtttgg 43393749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1231 - 1299
Target Start/End: Original strand, 3836600 - 3836668
Alignment:
Q  1231 cctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||||||| |||||||||||||||| ||  || ||| ||||||||| ||||||||| |||||||    
T  3836600 cctatttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaactt 3836668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1028 - 1076
Target Start/End: Original strand, 12110323 - 12110371
Alignment:
Q  1028 acaagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  12110323 acaagataaaataaagtcaaattgttttggtataagctataagctgttt 12110371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 946717 - 946763
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||||||||||||||||  | ||||||||||||    
T  946717 aagataaaataaagtcaaattgttttcgtattagttataagttgttt 946763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 1417229 - 1417275
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||||||||||||||| |||| || |||||||||||    
T  1417229 aagataaaataaagtcaaattgttttcatataagcaataagttgttt 1417275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Original strand, 30180016 - 30180062
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||||    
T  30180016 aagataaaataaagttaaattgttttcgtataagctataagctgttt 30180062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1002 - 1085
Target Start/End: Original strand, 30496639 - 30496724
Alignment:
Q  1002 gtgttaatgtatgaactaactctataacaagata--aaataaagtcaaattgttttcgtatacgctataagttgtttgtataaact 1085  Q
    ||||| |||||| |||||  |||||||||| |||  ||||||||||||||||||||||||||  ||||| |||||||  |||||||    
T  30496639 gtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcataaact 30496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1230 - 1291
Target Start/End: Complemental strand, 8427167 - 8427106
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    ||||||||||||||| ||||||||||||||| || | |||||  |||||||| |||||||||    
T  8427167 gcctatttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgg 8427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1230 - 1378
Target Start/End: Original strand, 12234805 - 12234951
Alignment:
Q  1230 gcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaacttgcaaaaaatagcttataacctcttcataag 1329  Q
    ||||||||||||||||||| ||||||||||| ||  |||| | ||| ||||| |||| |||||| | |||  | |||  | ||||| || | |  |||||    
T  12234805 gcctatttggattgacttagttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaa-cttatgacatgtctataag 12234903  T
Q  1330 ctgttttcagcttatttccataaagctctctaagataggttataaaaat 1378  Q
    ||||||||||||||||||||| |||||||||| || || | ||||||||    
T  12234904 ctgttttcagcttatttccat-aagctctctaggaaagctcataaaaat 12234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1226 - 1290
Target Start/End: Complemental strand, 23215013 - 23214949
Alignment:
Q  1226 tagagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttg 1290  Q
    |||||| | ||||||||||||||||||| |||||| || ||||||| ||||| ||| ||||||||    
T  23215013 tagagcatgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttg 23214949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1030 - 1086
Target Start/End: Complemental strand, 30456555 - 30456499
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaacta 1086  Q
    ||||||||||||||||||||||||||| |||| | ||||||| ||||  ||||||||    
T  30456555 aagataaaataaagtcaaattgttttcatataagttataagtggttttcataaacta 30456499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1236 - 1299
Target Start/End: Complemental strand, 529510 - 529447
Alignment:
Q  1236 ttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttggaagaactt 1299  Q
    ||||||||||||||||||||||||| ||  |||||| |||||||||  || ||||| |||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgaggctatttgggagaactt 529447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1030 - 1069
Target Start/End: Original strand, 23918922 - 23918961
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataa 1069  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  23918922 aagataaaataaagtcaaattgttttcatataagctataa 23918961  T

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Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1096
Target Start/End: Complemental strand, 5006614 - 5006548
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgtttgtataaactactctggagag 1096  Q
    ||||||||||||||||||| ||||||| |||| | ||||| ||||||  |||| |||| ||||||||    
T  5006614 aagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagctaccctggagag 5006548  T

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Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1324 - 1378
Target Start/End: Original strand, 15075094 - 15075147
Alignment:
Q  1324 cataagctgttttcagcttatttccataaagctctctaagataggttataaaaat 1378  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||| |||| |||||    
T  15075094 cataagctgtttttagcttatttccat-aagctctctaaggtagtttatgaaaat 15075147  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1322 - 1352
Target Start/End: Original strand, 26935564 - 26935594
Alignment:
Q  1322 ttcataagctgttttcagcttatttccataa 1352  Q
    |||||||||||||||||||||||||||||||    
T  26935564 ttcataagctgttttcagcttatttccataa 26935594  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1317 - 1375
Target Start/End: Complemental strand, 28165159 - 28165102
Alignment:
Q  1317 acctcttcataagctgttttcagcttatttccataaagctctctaagataggttataaa 1375  Q
    |||| ||||||||||||||||| ||||||||||| |||||||| | ||||| |||||||    
T  28165159 acctgttcataagctgttttcaacttatttccat-aagctctccatgatagcttataaa 28165102  T

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Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1030 - 1076
Target Start/End: Complemental strand, 45813285 - 45813239
Alignment:
Q  1030 aagataaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||| |||||||| ||||  |||||||||||||    
T  45813285 aagataaaataaagtcaacttgttttcatataatctataagttgttt 45813239  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1226 - 1291
Target Start/End: Original strand, 3610652 - 3610717
Alignment:
Q  1226 tagagcctatttggattgacttatttgagcttatcaacaagcataaccacttgtgacactgtttgg 1291  Q
    |||||||| |||| |||| |||||||||||||||| ||  || ||||||||||||| ||| |||||    
T  3610652 tagagcctgtttgaattggcttatttgagcttatctactggcctaaccacttgtgatactttttgg 3610717  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1035 - 1076
Target Start/End: Complemental strand, 18516349 - 18516308
Alignment:
Q  1035 aaaataaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||||||||||||||| ||| |||| ||||||||||||||    
T  18516349 aaaataaagtcaaattgtgttcatataagctataagttgttt 18516308  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1353
Target Start/End: Original strand, 27496416 - 27496445
Alignment:
Q  1324 cataagctgttttcagcttatttccataaa 1353  Q
    ||||||||||||||||||||||||||||||    
T  27496416 cataagctgttttcagcttatttccataaa 27496445  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1324 - 1353
Target Start/End: Original strand, 27503074 - 27503103
Alignment:
Q  1324 cataagctgttttcagcttatttccataaa 1353  Q
    ||||||||||||||||||||||||||||||    
T  27503074 cataagctgttttcagcttatttccataaa 27503103  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1227 - 1260
Target Start/End: Original strand, 28727676 - 28727709
Alignment:
Q  1227 agagcctatttggattgacttatttgagcttatc 1260  Q
    |||||||||||||||| |||||||||||||||||    
T  28727676 agagcctatttggattaacttatttgagcttatc 28727709  T

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Target: scaffold0199 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 1120 - 1187
Target Start/End: Original strand, 6885 - 6953
Alignment:
Q  1120 gacatgtcataagctctcttaaaca-tctcacaagtgcttatgcaagtagataatctgaaataaatcca 1187  Q
    ||||||||||||||||||  ||||| ||||||||||| |||||| ||||||||| || |||||| ||||    
T  6885 gacatgtcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataagtcca 6953  T

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Target: scaffold0528 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1046 - 1095
Target Start/End: Complemental strand, 1061 - 1012
Alignment:
Q  1046 aaattgttttcgtatacgctataagttgtttgtataaactactctggaga 1095  Q
    |||||||||||||||| ||||||||||||||  |||||||| | ||||||    
T  1061 aaattgttttcgtatatgctataagttgtttccataaactattttggaga 1012  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1039 - 1076
Target Start/End: Complemental strand, 11851 - 11814
Alignment:
Q  1039 taaagtcaaattgttttcgtatacgctataagttgttt 1076  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  11851 taaagttaaattgttttcgtataagctataagttgttt 11814  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 1304 - 1353
Target Start/End: Original strand, 98629 - 98678
Alignment:
Q  1304 aaaatagcttataacctcttcataagctgttttcagcttatttccataaa 1353  Q
    |||||||||||| || | ||||||||||||||||| |||||||| |||||    
T  98629 aaaatagcttatgacatgttcataagctgttttcaacttatttcaataaa 98678  T

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