View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11822_high_10 (Length: 269)
Name: NF11822_high_10
Description: NF11822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11822_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 48159540 - 48159778
Alignment:
| Q |
1 |
acattggcatgacaccaaaccatgagaattacgatcatgtcttaagaaatgcaatcgtgtaggcaatactttgaacactgccaaccttgttgttgttgtt |
100 |
Q |
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| T |
48159540 |
acattggcataccaccaaaccacgagaattacgatcatgtcttaagaaatgcaatcgtgtaggcaatactttgaacactgccaaccttgttgttgttgtt |
48159639 |
T |
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| Q |
101 |
cggcgaaatcttatatcatttttaattataatatttgaatttgcacccaatgttgccatatacattctatatctatattcaaatcctcaatattagaatg |
200 |
Q |
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| T |
48159640 |
cggcgaaatcttatatcatttttaattataatatttgaatttgcacccaatgttgccatatacattctatatct---------------atattagaatg |
48159724 |
T |
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| Q |
201 |
aagcaattccaccttgcaaattggaggtgcagtggaataataatatgaaaaaag |
254 |
Q |
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| T |
48159725 |
aagcaattccacctttcaaattggaggtgcagtggaataataatatgaaaaaag |
48159778 |
T |
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