View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11823_high_11 (Length: 357)
Name: NF11823_high_11
Description: NF11823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11823_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 34971968 - 34972205
Alignment:
| Q |
2 |
agctgcaacattttctctgcttccgtaacaatgacaaactagtattatgtttctccattattagtaataaaggttgaagcatacgtgtaccaagattcaa |
101 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34971968 |
agctgcaacattttttctgcttccgtaacaatgacaaactagtattatgtttctccattattagtaataaaggttgaagcatacgtgtaccaagattcaa |
34972067 |
T |
|
| Q |
102 |
aaattctttcataaaatggtaaataagttccgtgagggaaactacatacaccttgattgctgctttacaaaagaaataaaaagttttgacgtactagtta |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
34972068 |
aaattctttcataaaatggtaaataagttccgtgagggaaactacatacaccttgattgctgctttacaaaagaaataaaaaaatttgacgtactagtta |
34972167 |
T |
|
| Q |
202 |
caattattatatatcaacaaaaagaaacgctggtcaca |
239 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
34972168 |
caattattatatatcaacaaaaagaaacgctggtcaca |
34972205 |
T |
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