View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11823_high_8 (Length: 401)

Name: NF11823_high_8
Description: NF11823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11823_high_8
NF11823_high_8
[»] chr5 (52 HSPs)
chr5 (17-401)||(39780532-39780927)
chr5 (298-399)||(4153557-4153667)
chr5 (284-401)||(39919049-39919167)
chr5 (33-82)||(39791700-39791749)
chr5 (100-152)||(39791746-39791798)
chr5 (306-363)||(16280264-16280322)
chr5 (283-401)||(39886160-39886287)
chr5 (284-401)||(6558797-6558923)
chr5 (358-401)||(11786008-11786051)
chr5 (358-401)||(11897327-11897370)
chr5 (358-401)||(15241475-15241518)
chr5 (358-401)||(16386689-16386732)
chr5 (358-401)||(16789149-16789192)
chr5 (358-401)||(16891425-16891468)
chr5 (358-401)||(41319399-41319442)
chr5 (306-349)||(42885847-42885890)
chr5 (358-401)||(43580957-43581000)
chr5 (283-349)||(8241045-8241111)
chr5 (283-349)||(19480697-19480762)
chr5 (351-401)||(27498649-27498699)
chr5 (40-90)||(39795769-39795819)
chr5 (283-352)||(19891432-19891501)
chr5 (282-362)||(33999054-33999135)
chr5 (285-333)||(26912830-26912878)
chr5 (292-363)||(34398461-34398533)
chr5 (358-401)||(2301519-2301562)
chr5 (358-401)||(2848292-2848335)
chr5 (358-401)||(4745824-4745867)
chr5 (358-401)||(8968828-8968871)
chr5 (358-401)||(9835112-9835155)
chr5 (358-401)||(10404206-10404249)
chr5 (358-401)||(11795572-11795615)
chr5 (358-401)||(12463835-12463878)
chr5 (358-401)||(21749326-21749369)
chr5 (358-401)||(25400315-25400358)
chr5 (358-401)||(25648032-25648075)
chr5 (358-401)||(27765336-27765379)
chr5 (358-401)||(29691436-29691479)
chr5 (358-401)||(34389561-34389604)
chr5 (358-401)||(35515591-35515634)
chr5 (284-331)||(37034802-37034849)
chr5 (289-336)||(43328270-43328317)
chr5 (285-331)||(1269194-1269240)
chr5 (358-396)||(42525479-42525517)
chr5 (282-331)||(3712093-3712142)
chr5 (306-363)||(35241414-35241471)
chr5 (358-394)||(6526129-6526165)
chr5 (298-338)||(7968386-7968426)
chr5 (369-401)||(8478841-8478873)
chr5 (283-331)||(17064885-17064933)
chr5 (361-401)||(22931565-22931605)
chr5 (285-333)||(31074152-31074200)
[»] chr3 (63 HSPs)
chr3 (283-385)||(49728694-49728796)
chr3 (284-401)||(21405159-21405276)
chr3 (298-401)||(54626353-54626464)
chr3 (285-363)||(1743790-1743870)
chr3 (284-349)||(6488120-6488185)
chr3 (358-401)||(3894623-3894666)
chr3 (358-401)||(11820083-11820126)
chr3 (358-401)||(17729070-17729113)
chr3 (358-401)||(19030299-19030342)
chr3 (358-401)||(24430228-24430271)
chr3 (358-401)||(52410189-52410232)
chr3 (283-363)||(28193793-28193874)
chr3 (301-401)||(45871030-45871131)
chr3 (284-401)||(48739692-48739818)
chr3 (288-349)||(49194701-49194762)
chr3 (281-401)||(2522919-2523048)
chr3 (285-401)||(7269952-7270077)
chr3 (298-338)||(25638409-25638449)
chr3 (358-401)||(4139079-4139122)
chr3 (358-401)||(4860240-4860283)
chr3 (358-401)||(4880248-4880291)
chr3 (358-401)||(6919911-6919954)
chr3 (358-401)||(8964724-8964767)
chr3 (358-401)||(10482801-10482844)
chr3 (358-401)||(11234521-11234564)
chr3 (358-401)||(18194417-18194460)
chr3 (358-401)||(23164101-23164144)
chr3 (358-401)||(28550261-28550304)
chr3 (358-401)||(30555175-30555218)
chr3 (358-401)||(31316713-31316756)
chr3 (358-401)||(31327449-31327492)
chr3 (358-401)||(32256502-32256545)
chr3 (358-401)||(33706675-33706718)
chr3 (358-401)||(34898715-34898758)
chr3 (358-401)||(37488408-37488451)
chr3 (358-401)||(37800559-37800602)
chr3 (358-401)||(38819272-38819315)
chr3 (358-401)||(39720014-39720057)
chr3 (358-401)||(40548382-40548425)
chr3 (358-401)||(40933779-40933822)
chr3 (358-401)||(41936355-41936398)
chr3 (358-401)||(45512943-45512986)
chr3 (358-401)||(45701423-45701466)
chr3 (358-401)||(48251651-48251694)
chr3 (358-401)||(50496762-50496805)
chr3 (358-401)||(50675690-50675733)
chr3 (358-401)||(53432685-53432728)
chr3 (285-331)||(15492088-15492134)
chr3 (285-331)||(22472341-22472387)
chr3 (358-400)||(34579407-34579449)
chr3 (292-401)||(39169766-39169875)
chr3 (359-401)||(53906459-53906501)
chr3 (358-399)||(7920399-7920440)
chr3 (292-349)||(7938305-7938362)
chr3 (292-333)||(12894555-12894596)
chr3 (284-337)||(17218484-17218537)
chr3 (314-401)||(6447056-6447144)
chr3 (358-401)||(8762027-8762071)
chr3 (361-401)||(21324693-21324733)
chr3 (304-363)||(32732531-32732591)
chr3 (365-401)||(48887349-48887385)
chr3 (283-331)||(50727271-50727319)
chr3 (283-331)||(50785529-50785577)
[»] chr2 (36 HSPs)
chr2 (301-401)||(37063533-37063634)
chr2 (301-401)||(38179201-38179302)
chr2 (306-401)||(38387681-38387777)
chr2 (306-401)||(19612733-19612829)
chr2 (283-331)||(36005437-36005485)
chr2 (358-401)||(28153090-28153133)
chr2 (283-401)||(17034730-17034857)
chr2 (283-349)||(35798035-35798101)
chr2 (284-401)||(3438944-3439070)
chr2 (284-401)||(38557171-38557297)
chr2 (301-401)||(40688587-40688696)
chr2 (358-401)||(1260263-1260306)
chr2 (358-401)||(1309074-1309117)
chr2 (358-401)||(1844896-1844939)
chr2 (358-401)||(6331640-6331683)
chr2 (358-401)||(11144163-11144205)
chr2 (358-401)||(17499028-17499071)
chr2 (358-401)||(18694864-18694907)
chr2 (358-401)||(20296497-20296540)
chr2 (358-401)||(29449527-29449570)
chr2 (358-401)||(30932394-30932437)
chr2 (358-401)||(33228881-33228924)
chr2 (358-401)||(37486881-37486924)
chr2 (358-401)||(38400393-38400436)
chr2 (285-363)||(38525547-38525626)
chr2 (358-401)||(40535397-40535440)
chr2 (358-401)||(41509595-41509638)
chr2 (362-401)||(43895996-43896035)
chr2 (358-401)||(44186522-44186565)
chr2 (283-363)||(1232187-1232268)
chr2 (358-399)||(4562702-4562743)
chr2 (282-331)||(25076761-25076810)
chr2 (311-363)||(30871315-30871368)
chr2 (369-401)||(3287005-3287037)
chr2 (361-401)||(13975208-13975248)
chr2 (292-352)||(15764934-15764994)
[»] chr7 (48 HSPs)
chr7 (292-401)||(48288357-48288467)
chr7 (285-401)||(21388520-21388637)
chr7 (292-401)||(47255038-47255148)
chr7 (284-401)||(12615747-12615873)
chr7 (301-350)||(35293579-35293628)
chr7 (358-401)||(3529859-3529902)
chr7 (358-401)||(7401335-7401378)
chr7 (358-401)||(24061277-24061320)
chr7 (358-401)||(29281290-29281333)
chr7 (358-401)||(31077851-31077894)
chr7 (285-363)||(41913758-41913837)
chr7 (359-401)||(36174470-36174512)
chr7 (283-331)||(15655699-15655747)
chr7 (285-401)||(47999777-47999902)
chr7 (358-401)||(2229054-2229097)
chr7 (358-401)||(3062853-3062896)
chr7 (358-401)||(4960863-4960906)
chr7 (358-401)||(10244837-10244880)
chr7 (358-401)||(12640537-12640580)
chr7 (358-401)||(21762840-21762883)
chr7 (358-401)||(24508905-24508948)
chr7 (358-401)||(24781109-24781152)
chr7 (358-401)||(26130130-26130173)
chr7 (358-401)||(27510205-27510248)
chr7 (358-401)||(28547729-28547772)
chr7 (358-401)||(29617484-29617527)
chr7 (358-401)||(31026298-31026341)
chr7 (358-401)||(32619429-32619472)
chr7 (358-401)||(35645678-35645721)
chr7 (358-401)||(35950207-35950250)
chr7 (358-401)||(43119380-43119423)
chr7 (358-401)||(44616681-44616724)
chr7 (358-401)||(46534696-46534739)
chr7 (292-338)||(23817192-23817238)
chr7 (285-331)||(28444109-28444155)
chr7 (362-399)||(3532661-3532698)
chr7 (298-331)||(4232369-4232402)
chr7 (283-352)||(35815833-35815902)
chr7 (283-331)||(5073262-5073310)
chr7 (301-349)||(9497979-9498027)
chr7 (358-398)||(15074854-15074894)
chr7 (358-398)||(24732502-24732542)
chr7 (361-401)||(26801677-26801717)
chr7 (361-401)||(27634013-27634053)
chr7 (361-401)||(28424279-28424319)
chr7 (283-331)||(35645594-35645642)
chr7 (292-363)||(35683121-35683193)
chr7 (369-401)||(49089589-49089621)
[»] scaffold0009 (1 HSPs)
scaffold0009 (283-401)||(266653-266772)
[»] chr8 (55 HSPs)
chr8 (301-401)||(3189907-3190006)
chr8 (284-401)||(43656032-43656158)
chr8 (358-401)||(12173-12216)
chr8 (358-401)||(6942479-6942522)
chr8 (358-401)||(38344128-38344171)
chr8 (358-401)||(43283914-43283957)
chr8 (359-401)||(44673596-44673638)
chr8 (358-399)||(5332995-5333036)
chr8 (283-363)||(9070719-9070800)
chr8 (358-399)||(11491876-11491917)
chr8 (292-352)||(8698586-8698646)
chr8 (285-349)||(36540284-36540348)
chr8 (285-401)||(39587544-39587669)
chr8 (285-401)||(43403289-43403414)
chr8 (358-401)||(257618-257661)
chr8 (358-401)||(658259-658302)
chr8 (358-401)||(843995-844038)
chr8 (358-401)||(2787029-2787072)
chr8 (358-401)||(5570973-5571016)
chr8 (358-401)||(7816482-7816525)
chr8 (358-401)||(9187171-9187214)
chr8 (358-401)||(10568164-10568207)
chr8 (358-401)||(10736822-10736865)
chr8 (358-401)||(10761898-10761941)
chr8 (358-401)||(13647405-13647448)
chr8 (358-401)||(13747830-13747873)
chr8 (358-401)||(17027829-17027872)
chr8 (358-401)||(17072511-17072554)
chr8 (358-401)||(17558265-17558308)
chr8 (358-401)||(17575717-17575760)
chr8 (358-401)||(17698601-17698644)
chr8 (358-401)||(18926083-18926126)
chr8 (358-401)||(21133086-21133129)
chr8 (358-401)||(24480769-24480812)
chr8 (358-401)||(28909544-28909587)
chr8 (358-401)||(29170844-29170887)
chr8 (358-401)||(29514705-29514748)
chr8 (358-401)||(31450905-31450948)
chr8 (358-401)||(33838403-33838446)
chr8 (358-401)||(34266091-34266134)
chr8 (358-401)||(37717442-37717485)
chr8 (358-401)||(38219516-38219559)
chr8 (358-401)||(43186932-43186975)
chr8 (285-331)||(5326197-5326243)
chr8 (359-401)||(11127982-11128024)
chr8 (285-331)||(26280811-26280857)
chr8 (359-401)||(34472377-34472419)
chr8 (358-399)||(37291001-37291042)
chr8 (284-337)||(40322884-40322937)
chr8 (287-363)||(43856376-43856453)
chr8 (358-394)||(3227313-3227349)
chr8 (301-349)||(22487888-22487936)
chr8 (369-401)||(24458406-24458438)
chr8 (303-351)||(43287282-43287330)
chr8 (301-349)||(44088965-44089012)
[»] chr6 (41 HSPs)
chr6 (285-401)||(4408355-4408472)
chr6 (306-399)||(894590-894684)
chr6 (285-401)||(2816887-2817012)
chr6 (358-401)||(7545408-7545451)
chr6 (358-401)||(12284200-12284243)
chr6 (358-401)||(22997415-22997458)
chr6 (358-401)||(23790943-23790986)
chr6 (358-401)||(31802132-31802175)
chr6 (358-401)||(31803543-31803586)
chr6 (284-401)||(10517195-10517321)
chr6 (284-401)||(22574866-22574992)
chr6 (284-349)||(24758735-24758800)
chr6 (358-401)||(743642-743685)
chr6 (358-401)||(3640593-3640636)
chr6 (358-401)||(3794121-3794164)
chr6 (358-401)||(5052022-5052065)
chr6 (358-401)||(7207923-7207966)
chr6 (358-401)||(7328595-7328638)
chr6 (358-401)||(7581123-7581166)
chr6 (358-401)||(8857162-8857205)
chr6 (358-401)||(9704495-9704538)
chr6 (358-401)||(13116572-13116615)
chr6 (358-401)||(17441787-17441830)
chr6 (358-401)||(19953776-19953819)
chr6 (358-401)||(20584152-20584195)
chr6 (358-401)||(26347483-26347526)
chr6 (358-401)||(27218963-27219006)
chr6 (358-401)||(28148681-28148724)
chr6 (358-401)||(32611502-32611545)
chr6 (358-401)||(33573896-33573939)
chr6 (358-401)||(33646914-33646957)
chr6 (285-363)||(33697107-33697186)
chr6 (351-401)||(607250-607300)
chr6 (306-363)||(14709014-14709072)
chr6 (298-363)||(20728961-20729027)
chr6 (359-401)||(24618447-24618489)
chr6 (359-401)||(28842734-28842776)
chr6 (283-363)||(10483530-10483611)
chr6 (361-401)||(11301449-11301489)
chr6 (284-363)||(17454739-17454819)
chr6 (292-363)||(31935103-31935175)
[»] chr1 (48 HSPs)
chr1 (285-401)||(3269616-3269733)
chr1 (282-401)||(46021835-46021955)
chr1 (283-401)||(44732628-44732755)
chr1 (358-401)||(27642675-27642718)
chr1 (358-401)||(29188715-29188758)
chr1 (292-399)||(46225391-46225498)
chr1 (306-363)||(30360430-30360488)
chr1 (285-401)||(1836500-1836617)
chr1 (292-401)||(18534005-18534123)
chr1 (283-352)||(27344474-27344543)
chr1 (301-399)||(39922052-39922154)
chr1 (298-363)||(42127612-42127677)
chr1 (285-401)||(17776837-17776962)
chr1 (301-401)||(34656343-34656452)
chr1 (358-401)||(1570140-1570183)
chr1 (358-401)||(2277833-2277876)
chr1 (358-401)||(2754439-2754482)
chr1 (358-401)||(3560329-3560372)
chr1 (358-401)||(4482546-4482589)
chr1 (358-401)||(6438012-6438055)
chr1 (280-331)||(6893264-6893315)
chr1 (358-401)||(7191111-7191154)
chr1 (358-401)||(8984454-8984497)
chr1 (359-398)||(9866135-9866174)
chr1 (358-401)||(12048072-12048115)
chr1 (358-401)||(12502202-12502245)
chr1 (358-401)||(12650332-12650375)
chr1 (358-401)||(13773247-13773290)
chr1 (358-401)||(15819549-15819592)
chr1 (358-401)||(16313654-16313697)
chr1 (358-401)||(21265735-21265778)
chr1 (358-401)||(25999929-25999972)
chr1 (358-401)||(26550572-26550615)
chr1 (358-401)||(27818647-27818690)
chr1 (358-401)||(27871009-27871052)
chr1 (358-401)||(28564293-28564336)
chr1 (358-401)||(32594330-32594373)
chr1 (358-401)||(40519491-40519534)
chr1 (358-401)||(43884873-43884916)
chr1 (282-349)||(48638526-48638593)
chr1 (358-401)||(52369676-52369719)
chr1 (305-363)||(12374508-12374566)
chr1 (306-363)||(25540976-25541034)
chr1 (282-331)||(15775733-15775782)
chr1 (358-399)||(32970751-32970792)
chr1 (360-401)||(48643704-48643745)
chr1 (361-401)||(6213503-6213543)
chr1 (292-363)||(44019280-44019352)
[»] chr4 (52 HSPs)
chr4 (301-399)||(9661563-9661662)
chr4 (292-401)||(40994051-40994169)
chr4 (285-401)||(44602482-44602599)
chr4 (285-401)||(10402438-10402563)
chr4 (285-401)||(10417169-10417294)
chr4 (292-363)||(34040432-34040504)
chr4 (285-401)||(56087902-56088027)
chr4 (358-401)||(39696286-39696329)
chr4 (358-401)||(55021633-55021676)
chr4 (283-401)||(7686210-7686337)
chr4 (283-401)||(26919416-26919543)
chr4 (285-363)||(43481034-43481112)
chr4 (285-350)||(35465432-35465497)
chr4 (301-401)||(12775187-12775296)
chr4 (361-401)||(13264222-13264262)
chr4 (285-401)||(40051619-40051744)
chr4 (283-362)||(42073154-42073233)
chr4 (306-349)||(481554-481597)
chr4 (358-401)||(2222618-2222661)
chr4 (358-401)||(3036003-3036046)
chr4 (358-401)||(5304958-5305001)
chr4 (358-401)||(9761194-9761237)
chr4 (358-401)||(10141062-10141105)
chr4 (358-401)||(12581976-12582019)
chr4 (358-401)||(15208601-15208644)
chr4 (358-401)||(21935556-21935599)
chr4 (358-401)||(33325508-33325551)
chr4 (358-401)||(35948131-35948174)
chr4 (358-401)||(37251192-37251235)
chr4 (358-401)||(37719079-37719122)
chr4 (358-401)||(41854212-41854255)
chr4 (358-401)||(42395306-42395349)
chr4 (358-401)||(43147332-43147375)
chr4 (358-401)||(43596974-43597017)
chr4 (358-401)||(46774978-46775021)
chr4 (358-401)||(46998316-46998359)
chr4 (358-401)||(47934020-47934063)
chr4 (358-401)||(48950863-48950906)
chr4 (358-401)||(49757232-49757275)
chr4 (358-401)||(49901561-49901604)
chr4 (358-401)||(52731387-52731430)
chr4 (358-401)||(53634199-53634242)
chr4 (358-401)||(55536458-55536501)
chr4 (359-401)||(4234233-4234275)
chr4 (291-364)||(25526446-25526520)
chr4 (358-399)||(10406979-10407020)
chr4 (292-349)||(19594237-19594294)
chr4 (358-399)||(48825769-48825810)
chr4 (284-401)||(53376627-53376753)
chr4 (361-401)||(6371196-6371236)
chr4 (315-362)||(36802165-36802213)
chr4 (357-401)||(37920992-37921036)
[»] scaffold0031 (1 HSPs)
scaffold0031 (283-360)||(49998-50076)
[»] scaffold0025 (1 HSPs)
scaffold0025 (292-363)||(65781-65853)
[»] scaffold0024 (1 HSPs)
scaffold0024 (358-401)||(59862-59905)
[»] scaffold1185 (1 HSPs)
scaffold1185 (358-401)||(2341-2384)
[»] scaffold0690 (1 HSPs)
scaffold0690 (358-401)||(3745-3788)
[»] scaffold0608 (1 HSPs)
scaffold0608 (358-401)||(9045-9088)
[»] scaffold0460 (1 HSPs)
scaffold0460 (358-401)||(12538-12581)
[»] scaffold0128 (1 HSPs)
scaffold0128 (358-401)||(17699-17742)
[»] scaffold0088 (1 HSPs)
scaffold0088 (358-401)||(10774-10817)
[»] scaffold0028 (1 HSPs)
scaffold0028 (358-401)||(112187-112230)
[»] scaffold0014 (1 HSPs)
scaffold0014 (358-401)||(12209-12252)
[»] scaffold0121 (1 HSPs)
scaffold0121 (358-400)||(12073-12115)
[»] scaffold0294 (1 HSPs)
scaffold0294 (361-401)||(17209-17249)
[»] scaffold0154 (1 HSPs)
scaffold0154 (292-363)||(1720-1792)


Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 17 - 401
Target Start/End: Original strand, 39780532 - 39780927
Alignment:
Q  17 aaataggattttactctttttagtttattcatggagcttccttttgtcatgtttatttggtggtccttccttccagcacttttgtccgcaatcatacaat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39780532 aaataggattttactctttttagtttattcatggagcttccttttgtcatgtttatttggtggtccttccttccagcacttttgtccccaatcatacaat 39780631  T
Q  117 tttaaacgaaatttacttccagtttgtaaagtatgcttgtgtctttaagaaacgcgttacatatatttgaacattttattttatttattagaaaataatc 216  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39780632 tttaaacgaaatttacttccagtttgtaaagtatgcttgtgt-tttaagaaacgcgttacatatatttgaacattttattttatttattagaaaataatc 39780730  T
Q  217 tagcatacctgac----nnnnnnnnnnnntctagcatgtaagtgagacttgtgagttaataaatgtgtgattatccccatgagcgtaactcaattggtag 312  Q
    |||||||||||||                ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||    
T  39780731 tagcatacctgaccaaaaaaaataaaaaatctagcatgtaagtgagacttgtgagttaataaatgtgtgattatccccgtgagcgtagctcaattgctag 39780830  T
Q  313 agatattgcattttatatgtaagggttagggttcgaatccggacactc--------cacaactaaattgtgttagctctagccactagactacttga 401  Q
     |||||||||||||||||| |||||   | ||||||| ||||||||||        |||||||||||||||||||||||||||| ||||||||||||    
T  39780831 ggatattgcattttatatgcaagggccggagttcgaacccggacactccacttcttcacaactaaattgtgttagctctagccattagactacttga 39780927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 399
Target Start/End: Original strand, 4153557 - 4153667
Alignment:
Q  298 taactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggaca--------ctccacaactaaattgtgttagctctagcca 388  Q
    ||||||| ||||||| |||||||||||||||||||| ||||| ||||||||| | ||||||        |||||||| |||||||||| |||||||||||    
T  4153557 taactcagttggtagggatattgcattttatatgtatgggttggggttcgaacttcggacactctacttctccacaattaaattgtgtgagctctagcca 4153656  T
Q  389 ctagactactt 399  Q
    |||||||||||    
T  4153657 ctagactactt 4153667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 39919167 - 39919049
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctc 382  Q
    ||||||| ||||| || || | ||||||| |||||||||| ||||||| | | |   ||||||||| || ||||||||||||| |||||||||| |||||    
T  39919167 tatccccgtgagcttagcttagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtgtgagctc 39919068  T
Q  383 tagccactagactacttga 401  Q
    |||||||||| ||||||||    
T  39919067 tagccactaggctacttga 39919049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 39791700 - 39791749
Alignment:
Q  33 tttttagtttattcatggagcttccttttgtcatgtttatttggtggtcc 82  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||    
T  39791700 tttttagtttattcatggagcttctttctgtcatgtttatttggtggtcc 39791749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 39791746 - 39791798
Alignment:
Q  100 gtccgcaatcatacaattttaaacgaaatttacttccagtttgtaaagtatgc 152  Q
    |||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  39791746 gtccccaatcatacaattttaaatgaaatttacttccagtttgaaaagtatgc 39791798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 16280264 - 16280322
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    |||||||||||||||||||||||||||| ||||| |||||||||  |||||||||||||    
T  16280264 ttggtagagatattgcattttatatgtaggggttggggttcgaaccccggacactccac 16280322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 39886287 - 39886160
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaattg 373  Q
    |||||||| ||||| || |||| ||||||| |||||||||| ||||||||| | | | ||||||||| || |||||||||||        || |||||||    
T  39886287 ttatccccgtgagcatagctcagttggtagggatattgcatattatatgtaggagctggggttcgaaccccggacactccacttctccacaattaaattg 39886188  T
Q  374 tgttagctctagccactagactacttga 401  Q
    ||| ||||||||||||||||||||||||    
T  39886187 tgtgagctctagccactagactacttga 39886160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 6558797 - 6558923
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggaca--------ctccacaactaaattgt 374  Q
    ||||||| ||||| || |||||||||||| |||||||||| ||||||| | ||||  ||||||||| ||||||||        |||||||| ||||||||    
T  6558797 tatccccgtgagcttagctcaattggtagggatattgcatattatatgcaggggtcggggttcgaactccggacaccctacttctccacaattaaattgt 6558896  T
Q  375 gttagctctagccactagactacttga 401  Q
    || |||||||| |||||| ||||||||    
T  6558897 gtgagctctagtcactaggctacttga 6558923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 11786051 - 11786008
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  11786051 ctccacaattaaattgtgtgagctctagccactagactacttga 11786008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 11897327 - 11897370
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  11897327 ctccacaattaaattgtgtgagctctagccactagactacttga 11897370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 15241475 - 15241518
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  15241475 ctccacaattaaattgtgtgagctctagccactagactacttga 15241518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 16386732 - 16386689
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  16386732 ctccacaattaaattgtgtgagctctagccactagactacttga 16386689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 16789149 - 16789192
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  16789149 ctccacaattaaattgtgtgagctctagccactagactacttga 16789192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 16891425 - 16891468
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  16891425 ctccacaattaaattgtgtgagctctagccactagactacttga 16891468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 41319442 - 41319399
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  41319442 ctccacaattaaattgtgtgagctctagccactagactacttga 41319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 42885847 - 42885890
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  42885847 ttggtagagatattgcatattatatgtaagggttggggttcgaa 42885890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 43580957 - 43581000
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  43580957 ctccacaattaaattgtgtgagctctagccactagactacttga 43581000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 8241045 - 8241111
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||||||||||| || |||| ||||||| |||||||||| ||||||| ||||||  |||||||||    
T  8241045 ttatccccatgagcttagctcagttggtagggatattgcatattatatgcaagggtcggggttcgaa 8241111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 19480762 - 19480697
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||||| ||||| |||||||||||||||  |||| ||||||||||||| |||||| |||||||||    
T  19480762 ttatccccgtgagcttaactcaattggtaggaatatcgcattttatatgt-agggttggggttcgaa 19480697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 27498649 - 27498699
Alignment:
Q  351 ccggacactccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| ||||||| |||||||||| |||||||||||||| |||||||||    
T  27498649 ccggacaatccacaattaaattgtgtgagctctagccactaaactacttga 27498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 39795769 - 39795819
Alignment:
Q  40 tttattcatggagcttccttttgtcatgtttatttggtggtccttccttcc 90  Q
    |||||| |||||||||||||||||||||||| || | ||||||||||||||    
T  39795769 tttattaatggagcttccttttgtcatgtttcttagctggtccttccttcc 39795819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 352
Target Start/End: Complemental strand, 19891501 - 19891432
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc 352  Q
    |||||| | ||||| ||||||| ||||||  |||||||||||||||||| | ||||| ||||||||||||    
T  19891501 ttatcctcgtgagcttaactcagttggtaaggatattgcattttatatgcaggggttggggttcgaatcc 19891432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 33999054 - 33999135
Alignment:
Q  282 attatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactcca 362  Q
    |||||| |||| ||| ||||||| ||||||  |||||| ||||||||||||| ||||| |||||||||  ||||||||||||    
T  33999054 attatctccattagcttaactcagttggtaacgatattacattttatatgtaggggttggggttcgaaccccggacactcca 33999135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 333
Target Start/End: Original strand, 26912830 - 26912878
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgta 333  Q
    |||||| ||||| ||||||||||||||| |||||||||| |||||||||    
T  26912830 atccccgtgagcttaactcaattggtagggatattgcatattatatgta 26912878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 34398461 - 34398533
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||| ||||||||||||||||||||| |||||||||||| | | ||  |||||||||  |||||||||||||    
T  34398461 tgagcttaactcaattggtagagatatcgcattttatatgcaggagtcggggttcgaaccccggacactccac 34398533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 2301562 - 2301519
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2301562 ctccacaattaaattgtgtgagctctagccactaggctacttga 2301519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 2848292 - 2848335
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2848292 ctccacaattaaattgtgtgagctctagccactaggctacttga 2848335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 4745867 - 4745824
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  4745867 ctccacaattaaattgtgtgagctctagccactaggctacttga 4745824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 8968828 - 8968871
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  8968828 ctccacaattaaattgtgtgagctctagccactaggctacttga 8968871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 9835112 - 9835155
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  9835112 ctccacaattaaattgtgtgagctctagccactaggctacttga 9835155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 10404206 - 10404249
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10404206 ctccacaattaaattgtgtgagctctagccactaggctacttga 10404249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 11795572 - 11795615
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  11795572 ctccacaattaaattgtgtgagctctagccactaggctacttga 11795615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 12463835 - 12463878
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12463835 ctccacaattaaattgtgtgagctctagccactaggctacttga 12463878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 21749369 - 21749326
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  21749369 ctccacaattaaattgtgtgagctctagccactaggctacttga 21749326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 25400358 - 25400315
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  25400358 ctccacaattaaattgtgtgagctctagccactaggctacttga 25400315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 25648075 - 25648032
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  25648075 ctccacaattaaattgtgtgagctctagccactaggctacttga 25648032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 27765336 - 27765379
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  27765336 ctccacaattaaattgtgtgagctctagccactaggctacttga 27765379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 29691436 - 29691479
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  29691436 ctccacaattaaattgtgtgagctctagccactaggctacttga 29691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 34389604 - 34389561
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||    
T  34389604 ctccacaattaaattgtgtgagctcaagccactagactacttga 34389561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 35515591 - 35515634
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  35515591 ctccacaattaaattgtgtgagctctagccactaggctacttga 35515634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 37034802 - 37034849
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    ||||||||||||| || |||||||||||| ||||| ||||||||||||    
T  37034802 tatccccatgagcttagctcaattggtagggatatcgcattttatatg 37034849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 43328270 - 43328317
Alignment:
Q  289 ccatgagcgtaactcaattggtagagatattgcattttatatgtaagg 336  Q
    |||||||| ||||||| ||||||||||||||| || ||||||||||||    
T  43328270 ccatgagcttaactcagttggtagagatattgtatattatatgtaagg 43328317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 1269240 - 1269194
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||| ||||| || ||||||||||||||||||||||| |||||||    
T  1269240 atccccgtgagcttagctcaattggtagagatattgcatattatatg 1269194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 42525479 - 42525517
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagacta 396  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  42525479 ctccacaattaaattgtgtgagctctagccactagacta 42525517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 3712142 - 3712093
Alignment:
Q  282 attatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    ||||||||| | ||| || |||| ||||||||||||||||||||||||||    
T  3712142 attatccccgtaagcttagctcagttggtagagatattgcattttatatg 3712093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 35241414 - 35241471
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaatccggacactccac 363  Q
    |||||||||||||||||| ||||||| | ||||  ||||||||| || ||||||||||    
T  35241414 ttggtagagatattgcatattatatgcaggggtcggggttcgaaccctgacactccac 35241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 6526129 - 6526165
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagac 394  Q
    |||||||| |||||||||| |||||||||||||||||    
T  6526129 ctccacaattaaattgtgtgagctctagccactagac 6526165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 7968426 - 7968386
Alignment:
Q  298 taactcaattggtagagatattgcattttatatgtaagggt 338  Q
    ||||||||||||||||||||||||||  |||||||| ||||    
T  7968426 taactcaattggtagagatattgcataatatatgtaggggt 7968386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 8478873 - 8478841
Alignment:
Q  369 aattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||||||||||||||||||||    
T  8478873 aattgtgtgagctctagccactagactacttga 8478841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 17064933 - 17064885
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||| | ||||| ||||||||||||||| |||||||||| |||||||    
T  17064933 ttatcctcgtgagcttaactcaattggtagggatattgcatattatatg 17064885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 22931605 - 22931565
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  22931605 cacaattaaattgtgtgagctctaaccactagactacttga 22931565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 333
Target Start/End: Complemental strand, 31074200 - 31074152
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgta 333  Q
    |||||| ||||| ||||||| ||||||| |||||| |||||||||||||    
T  31074200 atccccgtgagcttaactcagttggtagggatattacattttatatgta 31074152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 49728694 - 49728796
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggacactccacaactaaattgtgttagct 381  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||||||| ||| |  ||||||||||| ||||||||||||||| |||||||||| ||||    
T  49728694 ttatcccc-tgagcttaactcaattggtagggatattgcattttatatgcaagagccagggttcgaatcccggacactccacaattaaattgtgtgagct 49728792  T
Q  382 ctag 385  Q
    ||||    
T  49728793 ctag 49728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 21405159 - 21405276
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccggacactccacaactaaattgtgttagctct 383  Q
    ||||||| ||||| || |||| |||| || |||||||||||| ||||||| | | | |||||||||||| |||||||||||| |||||| ||| ||||||    
T  21405159 tatccccgtgagcttacctcagttggaagggatattgcatttaatatgtaggagctggggttcgaatcccgacactccacaattaaattatgtgagctct 21405258  T
Q  384 agccactagactacttga 401  Q
    | ||||||||||| ||||    
T  21405259 aaccactagactatttga 21405276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 401
Target Start/End: Original strand, 54626353 - 54626464
Alignment:
Q  298 taactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac-------aactaaattgtgttagctctagccac 389  Q
    ||||||||||||||| ||||| |||||||||||||| | ||  ||||||||| || |||||||||||       || |||||||||| ||||||||||||    
T  54626353 taactcaattggtagggatatcgcattttatatgtaggagtcggggttcgaaccccggacactccactctccacaattaaattgtgtgagctctagccac 54626452  T
Q  390 tagactacttga 401  Q
    ||||||||||||    
T  54626453 tagactacttga 54626464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 1743870 - 1743790
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa--tccggacactccac 363  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||| |||   |||||||||   |||||||||||||    
T  1743870 atccccgtgagcttaactcaattggtagggatattgcattttatatgtaggggccggggttcgaacccccggacactccac 1743790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 6488120 - 6488185
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    ||||||||||||| || |||||||||||| |||||||||| ||||||| | ||| |||||||||||    
T  6488120 tatccccatgagcttagctcaattggtagggatattgcatattatatgcaggggctagggttcgaa 6488185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 3894623 - 3894666
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  3894623 ctccacaattaaattgtgtgagctctagccactagactacttga 3894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 11820083 - 11820126
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  11820083 ctccacaattaaattgtgtgagctctagccactagactacttga 11820126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 17729070 - 17729113
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  17729070 ctccacaattaaattgtgtgagctctagccactagactacttga 17729113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 19030299 - 19030342
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  19030299 ctccacaattaaattgtgtgagctctagccactagactacttga 19030342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 24430228 - 24430271
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  24430228 ctccacaattaaattgtgtgagctctagccactagactacttga 24430271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 52410232 - 52410189
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  52410232 ctccacaattaaattgtgtgagctctagccactagactacttga 52410189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 28193793 - 28193874
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    |||||||| ||||| ||||||| ||||||| |||||||||||||||||| | ||||  |||| ||||  |||||||||||||    
T  28193793 ttatccccttgagcttaactcagttggtagggatattgcattttatatgcaggggtcggggtacgaaccccggacactccac 28193874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 45871030 - 45871131
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||| ||||||| ||||||| || ||||||| | ||||  ||||||||| || |||||||| |||| | |||||||| || ||||||||||| |||||||    
T  45871030 ctcagttggtagggatattgtatattatatgcaggggtcggggttcgaaccccggacactctacaatttaattgtgtgagttctagccactaaactactt 45871129  T
Q  400 ga 401  Q
    ||    
T  45871130 ga 45871131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 48739818 - 48739692
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccg-gacac--------tccacaactaaattgt 374  Q
    ||||||| ||||| || |||| ||||||| |||||||||||||||||| | ||| | ||||||||| ||  |||||        ||||||| |||| |||    
T  48739818 tatccccgtgagcttagctcagttggtagggatattgcattttatatgcaggggctggggttcgaaccccagacaccccacttctccacaattaaactgt 48739719  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||||||||||||||||||||    
T  48739718 gtgagctctagccactagactacttga 48739692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 49194762 - 49194701
Alignment:
Q  288 cccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    ||||||| | |||||||||||||||  ||||||||| ||||||||| |||| ||||||||||    
T  49194762 cccatgaacttaactcaattggtaggaatattgcatattatatgtaggggtcagggttcgaa 49194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 2522919 - 2523048
Alignment:
Q  281 gattatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaat 371  Q
    |||||||||| ||||| || |||| ||||||| |||||||||| ||||||| ||| | | ||||| ||| || |||||||||||        || |||||    
T  2522919 gattatccccgtgagcttagctcagttggtagggatattgcatattatatgcaagagctggggtttgaaccccggacactccacttctccacaattaaat 2523018  T
Q  372 tgtgttagctctagccactagactacttga 401  Q
    ||||| ||||||||||||||| ||||||||    
T  2523019 tgtgtgagctctagccactaggctacttga 2523048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 7269952 - 7270077
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac--------aactaaattgtg 375  Q
    |||||| ||||| || |||| ||||||| |||||||||| ||||||| | | | | ||||||||| ||||||||||||||        || |||||||||    
T  7269952 atccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttctccacaattaaattgtg 7270051  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||||||| ||||||||    
T  7270052 tgagctctagccactaggctacttga 7270077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 338
Target Start/End: Complemental strand, 25638449 - 25638409
Alignment:
Q  298 taactcaattggtagagatattgcattttatatgtaagggt 338  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  25638449 taactcaattggtagagatattgcatattatatgtaggggt 25638409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 4139079 - 4139122
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  4139079 ctccacaattaaattgtgtgagctctagccactaggctacttga 4139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 4860240 - 4860283
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  4860240 ctccacaattaaattgtgtgagctctaaccactagactacttga 4860283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 4880248 - 4880291
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  4880248 ctccacaattaaattgtgtgagctctaaccactagactacttga 4880291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 6919954 - 6919911
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  6919954 ctccacaattaaattgtgtgagctctagccactaggctacttga 6919911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 8964767 - 8964724
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  8964767 ctccacaattaaattgtgtgagctctagccactaggctacttga 8964724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 10482844 - 10482801
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10482844 ctccacaattaaattgtgtgagctctagccactaggctacttga 10482801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 11234521 - 11234564
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  11234521 ctccacaaataaattgtgtgagctctagccattagactacttga 11234564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 18194417 - 18194460
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  18194417 ctccacaattaaattgtgtgagctctagccactaggctacttga 18194460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 23164144 - 23164101
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||||| |||||||||    
T  23164144 ctccacaattaaattgtgtgagctctagccactaaactacttga 23164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 28550304 - 28550261
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28550304 ctccacaattaaattgtgtgagctctagccactagtctacttga 28550261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 30555218 - 30555175
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  30555218 ctccacaattaaattgtgtgagctctagccactaggctacttga 30555175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 31316713 - 31316756
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||| || ||||||||||||||||||||||||    
T  31316713 ctccacaattaaattgggtgagctctagccactagactacttga 31316756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 31327492 - 31327449
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  31327492 ctccacaattaaattgtgtgagctctagccactaggctacttga 31327449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 32256545 - 32256502
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||||| |||||||||    
T  32256545 ctccacaattaaattgtgtgagctctagccactaaactacttga 32256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 33706718 - 33706675
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  33706718 ctccacaattaaattgtgtgagctctagccactaggctacttga 33706675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 34898758 - 34898715
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||||||| |||||||    
T  34898758 ctccacaattaaattgtgtgagctctagccactagattacttga 34898715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 37488451 - 37488408
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  37488451 ctccacaattaaattgtgtgagctctagccactaggctacttga 37488408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 37800602 - 37800559
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  37800602 ctccacaattaaattgtgtgagctctagccactaggctacttga 37800559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 38819315 - 38819272
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  38819315 ctccacaatttaattgtgtgagctctagccactagactacttga 38819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 39720014 - 39720057
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  39720014 ctccacaattaaattgtgtgagctctagccactaggctacttga 39720057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 40548382 - 40548425
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  40548382 ctccacaattaaattgtgtgagctctagccactaggctacttga 40548425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 40933822 - 40933779
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  40933822 ctccacaattaaattgtgtgagctctagccactaggctacttga 40933779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 41936398 - 41936355
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  41936398 ctccacaattaaattgtgtgagctctagccactaggctacttga 41936355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 45512986 - 45512943
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  45512986 ctccacaattaaattgtgtgagctctaaccactagactacttga 45512943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 45701423 - 45701466
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  45701423 ctccacaattaaattgtgtgagctctagccactaggctacttga 45701466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 48251651 - 48251694
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  48251651 ctccacaattaaattgtgtgagctctagccactaggctacttga 48251694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 50496805 - 50496762
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  50496805 ctccacaattaaattgtgtgagctctagccactaggctacttga 50496762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 50675733 - 50675690
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  50675733 ctccacaattaaattgtgtgagctctagccactaggctacttga 50675690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 53432728 - 53432685
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  53432728 ctccacaattaaattgtgtgagctctagccactaggctacttga 53432685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 331
Target Start/End: Original strand, 15492088 - 15492134
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||||||||| ||||| | ||||||| ||||||||||||||||||    
T  15492088 atccccatgagcttaactgagttggtagggatattgcattttatatg 15492134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 22472387 - 22472341
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||| ||||| ||||||| |||||||||||||||||| |||||||    
T  22472387 atccccgtgagcttaactcagttggtagagatattgcatattatatg 22472341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 34579449 - 34579407
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttg 400  Q
    |||||||| |||||||||| | |||||||||||||||||||||    
T  34579449 ctccacaattaaattgtgtgaactctagccactagactacttg 34579407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 39169766 - 39169875
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccgga-cactccacaactaaattgtgttagctctagccact 390  Q
    ||||| ||||||| || ||||||||||||||| | ||||| | |||   ||||||||| || || |||||||||| | |||||||| ||||||| |||||    
T  39169766 tgagcttaactcagttagtagagatattgcatat-atatgcaggggccggggttcgaaccccgaacactccacaatttaattgtgtgagctctaaccact 39169864  T
Q  391 agactacttga 401  Q
    | |||||||||    
T  39169865 atactacttga 39169875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 53906459 - 53906501
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||    
T  53906459 tccacaattaaattgtgtgagctctagccactaggctacttga 53906501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 7920399 - 7920440
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  7920399 ctccacaattaaattgtgtgagctctagccactaggctactt 7920440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 7938362 - 7938305
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    ||||| ||||||| ||||||| |||||| ||||||||||||| ||||  |||||||||    
T  7938362 tgagcttaactcagttggtagggatattacattttatatgtaggggtcggggttcgaa 7938305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 12894596 - 12894555
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgta 333  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||    
T  12894596 tgagcttaactcagttggtagggatattgcattttatatgta 12894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Original strand, 17218484 - 17218537
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaaggg 337  Q
    ||||||||||||| || |||| ||||||| |||||||||| ||||||| |||||    
T  17218484 tatccccatgagcttagctcagttggtagggatattgcatattatatgcaaggg 17218537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 401
Target Start/End: Original strand, 6447056 - 6447144
Alignment:
Q  314 gatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| || ||| ||| | |||| |||||||||| || ||||||||||||| | |||||||| || ||||||||||||  |||||||    
T  6447056 gatattgtatattacatgcaggggtcagggttcgaaccccggacactccacaatttaattgtgtgaggtctagccactaggttacttga 6447144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 8762071 - 8762027
Alignment:
Q  358 ctccacaactaaattgtgttag-ctctagccactagactacttga 401  Q
    |||||||| |||||||||| || ||||||||||||||||||||||    
T  8762071 ctccacaattaaattgtgtgaggctctagccactagactacttga 8762027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 21324733 - 21324693
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  21324733 cacaattaaattgtgtgagctctagccactaggctacttga 21324693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 32732591 - 32732531
Alignment:
Q  304 aattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||||||| ||||| |||||||||||| | ||||  ||||||||| ||||||||||||||    
T  32732591 aattggtagggatatcgcattttatatgcaggggtcggggttcgaactccggacactccac 32732531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 48887385 - 48887349
Alignment:
Q  365 actaaattgtgttagctctagccactagactacttga 401  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  48887385 actaaattgtgtgagctctagccactagactatttga 48887349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 50727319 - 50727271
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||||| ||||| ||||||| ||||||| ||||| ||||||||||||    
T  50727319 ttatccccgtgagcctaactcagttggtagggatatcgcattttatatg 50727271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 50785529 - 50785577
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||||| ||||| ||||||| ||||||| ||||| ||||||||||||    
T  50785529 ttatccccgtgagcctaactcagttggtagggatatcgcattttatatg 50785577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 7e-22; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 301 - 401
Target Start/End: Original strand, 37063533 - 37063634
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||| ||||||| |||||||||| ||||||| | |||  |||||||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  37063533 ctcagttggtagggatattgcatattatatgcaggggccagggttcgaactccggacactccacaatttaattgtgtgagctctagccactagactactt 37063632  T
Q  400 ga 401  Q
    ||    
T  37063633 ga 37063634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 38179302 - 38179201
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaatc-cggacactccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||| ||||||| |||||||||||||||||| | ||| | ||||||||| | |||||||||||||| |||||||||| |||||||| || ||| ||||||    
T  38179302 ctcagttggtagggatattgcattttatatgcaggggctggggttcgaacctcggacactccacaattaaattgtgtgagctctagtcattaggctactt 38179203  T
Q  400 ga 401  Q
    ||    
T  38179202 ga 38179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 38387681 - 38387777
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaatccg-gacactccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||| | ||| | ||||||||| ||  |||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  38387681 ttggtagggatattgcatattatatgcaggggctggggttcgaaccccagacactccacaatttaattgtgtgagctctagccactaggctacttga 38387777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 401
Target Start/End: Original strand, 19612733 - 19612829
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaatccg-gacactccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||| | | | ||||||||| ||  |||||||||||| | |||||||| ||||||||||| ||| ||||||||    
T  19612733 ttggtagggatattgcatattatatgtaggagctggggttcgaaccccagacactccacaatttaattgtgtgagctctagccattaggctacttga 19612829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 36005437 - 36005485
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  36005437 ttatccccgtgagcgtaactcaattggtagggatattgcatattatatg 36005485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 28153133 - 28153090
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  28153133 ctccacaattaaattgtgtgagctctagccactagactacttga 28153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 401
Target Start/End: Original strand, 17034730 - 17034857
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggaca--------ctccacaactaaattg 373  Q
    |||||||| ||||| || |||||||||||| |||||||||| ||||||| | | ||  |||||||||| |||||||        |||||||| ||||||     
T  17034730 ttatccccgtgagcttagctcaattggtagggatattgcatattatatgcaggagtcggggttcgaatcccggacactccacttctccacaattaaatta 17034829  T
Q  374 tgttagctctagccactagactacttga 401  Q
    ||| ||||||||||||||| ||||||||    
T  17034830 tgtgagctctagccactaggctacttga 17034857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 35798101 - 35798035
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||||| ||||| ||||||| ||| |||||||||||||| ||||||| | ||||| |||||||||    
T  35798101 ttatccccgtgagcttaactcagttgttagagatattgcatattatatgcaggggttggggttcgaa 35798035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 3438944 - 3439070
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaattgt 374  Q
    ||||||| |||||||| |||| ||||||| |||||||||| ||||||| | | ||  ||||||||| || |||||||||||        || ||||||||    
T  3438944 tatccccgtgagcgtagctcagttggtagggatattgcatattatatgcaggagtcggggttcgaaccccggacactccacttctccacaattaaattgt 3439043  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||||||||||||||| ||||    
T  3439044 gtgagctctagccactagactatttga 3439070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 38557297 - 38557171
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacac--------tccacaactaaattgt 374  Q
    ||||||| ||||| ||||||| ||||||| ||||| |||||||||||| | ||||  |||||||||  ||||||||        || |||| ||||||||    
T  38557297 tatccccgtgagcttaactcagttggtagggatatggcattttatatgcaggggtcggggttcgaaccccggacacttcacttatctacaattaaattgt 38557198  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||||||| ||||||||||||    
T  38557197 gtgagctctagccattagactacttga 38557171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 40688696 - 40688587
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggaca--------ctccacaactaaattgtgttagctctagccacta 391  Q
    |||| |||||||||||||||||||||||||| | |||  ||||||||||  |||||||        |||||||| |||||||||| ||||||| ||||||    
T  40688696 ctcagttggtagagatattgcattttatatgcaggggccagggttcgaaccccggacactctacttctccacaattaaattgtgtgagctctaaccacta 40688597  T
Q  392 gactacttga 401  Q
    | ||||||||    
T  40688596 ggctacttga 40688587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 1260263 - 1260306
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  1260263 ctccacaattaaattgtgtgagctctagccactaggctacttga 1260306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 1309117 - 1309074
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  1309117 ctccacaattaaattgtgtgagctctagccactaggctacttga 1309074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 1844896 - 1844939
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  1844896 ctccacaattaaattgtgtgagctctagccactaggctacttga 1844939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 6331640 - 6331683
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  6331640 ctccacaattaaattgtgtgagctctagccactaggctacttga 6331683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 11144205 - 11144163
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||||||||||||||||||| ||||||||    
T  11144205 ctccacaa-taaattgtgttagctctagccactaggctacttga 11144163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 17499028 - 17499071
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17499028 ctccacaattaaattgtgtgagctctagccactaggctacttga 17499071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 18694864 - 18694907
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  18694864 ctccacaattaaattgtgtgagctctagccactaggctacttga 18694907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 20296497 - 20296540
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  20296497 ctccacaattaaattgtgtgagctctagccactaggctacttga 20296540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 29449527 - 29449570
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  29449527 ctccacaattaaattgtgtgagctctagccattagactacttga 29449570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 30932437 - 30932394
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||| | ||||||||||||||||||||||||    
T  30932437 ctccacaattaaattgtatgagctctagccactagactacttga 30932394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 33228924 - 33228881
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  33228924 ctccacaattaaattgtgtgagctctagccactaggctacttga 33228881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 37486924 - 37486881
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||    
T  37486924 ctccacaattaaattgtgtgagctctagccactagactatttga 37486881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 38400393 - 38400436
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  38400393 ctccacaattaaattgtgtgagctctagccactaggctacttga 38400436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 38525626 - 38525547
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccgg-acactccac 363  Q
    |||||| ||||| || |||| ||||||  |||||||||||||||||| | |||| |||||||||| |||| |||||||||    
T  38525626 atccccgtgagcttagctcagttggtaaggatattgcattttatatgcaggggtcagggttcgaacccggaacactccac 38525547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 40535440 - 40535397
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  40535440 ctccacaattaaattgtgtgagctctagccactaggctacttga 40535397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 41509595 - 41509638
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  41509595 ctccacaattaaattgtgtgagctctagccactaggctacttga 41509638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 362 - 401
Target Start/End: Original strand, 43895996 - 43896035
Alignment:
Q  362 acaactaaattgtgttagctctagccactagactacttga 401  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  43895996 acaattaaattgtgtgagctctagccactagactacttga 43896035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 44186522 - 44186565
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  44186522 ctccacaattaaattgtgtgagctctagccaccagactacttga 44186565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 1232187 - 1232268
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggacactccac 363  Q
    |||||||| ||||| ||||||| ||||||  |||||  ||||||||||| | |||||  ||||||||| |||||||||||||    
T  1232187 ttatccccgtgagcttaactcagttggtaaggatatcacattttatatgcaggggttgaggttcgaatcccggacactccac 1232268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 4562743 - 4562702
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  4562743 ctccacaattaaattgtgtgagctctagccactaggctactt 4562702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 25076761 - 25076810
Alignment:
Q  282 attatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||||||  |||| ||||||| |||||| |||||||||||||||||||    
T  25076761 attatccccgcgagcttaactcagttggtaaagatattgcattttatatg 25076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 30871368 - 30871315
Alignment:
Q  311 agagatattgcattttatatgtaagggttagggttcgaat-ccggacactccac 363  Q
    ||||||||||||||||| ||| | |||| ||||||||||| |||||||||||||    
T  30871368 agagatattgcattttacatgcaggggtcagggttcgaatcccggacactccac 30871315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 3287037 - 3287005
Alignment:
Q  369 aattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||||||||||||||||||||    
T  3287037 aattgtgtgagctctagccactagactacttga 3287005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 13975208 - 13975248
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  13975208 cacaattaaattgtgtgagctctagccactagattacttga 13975248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 15764934 - 15764994
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc 352  Q
    ||||| || |||| ||||||| |||||||||| ||||||| | ||||| ||||||||||||    
T  15764934 tgagcttagctcagttggtagggatattgcatattatatgcaggggttggggttcgaatcc 15764994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 292 - 401
Target Start/End: Complemental strand, 48288467 - 48288357
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccact 390  Q
    ||||| ||||||| ||||||| |||||||||| ||||||| | | |    ||||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  48288467 tgagcttaactcagttggtagggatattgcatattatatgcaggagccgaggttcgaatcccggacactccacaattaaattgtgtgagctctagccact 48288368  T
Q  391 agactacttga 401  Q
    |||||||||||    
T  48288367 agactacttga 48288357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 21388520 - 21388637
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccacaactaaattgtgttagctct 383  Q
    ||||||||||||||| |||| ||||||| |||||||||| ||||||| | | |   |||||||||  ||||||||||||||| |||||||||| ||||||    
T  21388520 atccccatgagcgtagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtgtgagctct 21388619  T
Q  384 agccactagactacttga 401  Q
    ||||||||  ||||||||    
T  21388620 agccactaagctacttga 21388637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 401
Target Start/End: Complemental strand, 47255148 - 47255038
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccact 390  Q
    ||||| ||||||| |||| ||||||||||||| |||| || | | |   ||||||||| || ||||||| ||||| |||||||||| |||||||||||||    
T  47255148 tgagcttaactcagttggcagagatattgcatattatctgcaggagccggggttcgaaccccggacacttcacaattaaattgtgtgagctctagccact 47255049  T
Q  391 agactacttga 401  Q
    || ||||||||    
T  47255048 aggctacttga 47255038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 12615747 - 12615873
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacac--------tccacaactaaattgt 374  Q
    ||||||| ||||| ||||||| ||| ||| |||||||||| ||||||| | ||||| || |||||| |||||||||        ||||||| ||||||||    
T  12615747 tatccccttgagcttaactcagttgatagggatattgcatattatatgcaggggttgggattcgaactccggacaccccgcttctccacaattaaattgt 12615846  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||| ||||||||||||||||    
T  12615847 gtgagctctaaccactagactacttga 12615873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 35293628 - 35293579
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaat 350  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  35293628 ctcaaatggtagagatattgcattttatatgcaagggtcagggttcgaat 35293579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 3529859 - 3529902
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  3529859 ctccacaattaaattgtgtgagctctagccactagactacttga 3529902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 7401378 - 7401335
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  7401378 ctccacaattaaattgtgtgagctctagccactagactacttga 7401335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 24061320 - 24061277
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  24061320 ctccacaattaaattgtgtgagctctagccactagactacttga 24061277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 29281333 - 29281290
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  29281333 ctccacaattaaattgtgtgagctctagccactagactacttga 29281290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 31077894 - 31077851
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  31077894 ctccacaattaaattgtgtgagctctagccactagactacttga 31077851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 41913837 - 41913758
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||||| |||| || |||| ||| |||||||||||||||||||||| | |||| ||||||||||  |||||||||||||    
T  41913837 atccccacgagcttagctcagttgatagagatattgcattttatatgcaggggtcagggttcgaaccccggacactccac 41913758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 36174470 - 36174512
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  36174470 tccacaattaaattgtgtgagctctagccactagactacttga 36174512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 15655699 - 15655747
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    ||||| |||||||| || |||||||||||| ||||||||||||||||||    
T  15655699 ttatctccatgagcttagctcaattggtagggatattgcattttatatg 15655747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 47999777 - 47999902
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggacactccac--------aactaaattgtg 375  Q
    |||||| ||||| || |||| ||||||| |||||||||| ||||||||| | | | |||||||||| |||||||||||||        || |||||||||    
T  47999777 atccccgtgagcttagctcagttggtagggatattgcatattatatgtaggagctggggttcgaatcccggacactccacttctccataattaaattgtg 47999876  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||| ||| ||||||||    
T  47999877 tgagctctagccattaggctacttga 47999902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 2229054 - 2229097
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  2229054 ctccacaattaaattgtgtgagctctagccattagactacttga 2229097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 3062853 - 3062896
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  3062853 ctccacaattaaattgtgtgagctctagccactaggctacttga 3062896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 4960863 - 4960906
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  4960863 ctccacaattaaattgtgtgagctctagccactaggctacttga 4960906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 10244880 - 10244837
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10244880 ctccacaattaaattgtgtgagctctagccactaggctacttga 10244837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12640580 - 12640537
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12640580 ctccacaattaaattgtgtgagctctagccactaggctacttga 12640537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 21762883 - 21762840
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  21762883 ctccacaattaaattgtgtgagctctagccactaggctacttga 21762840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 24508905 - 24508948
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  24508905 ctccacaattaaattgtgtgagctctagccactaggctacttga 24508948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 24781109 - 24781152
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  24781109 ctccacaattaaattgtgtgagctctagccactaggctacttga 24781152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 26130173 - 26130130
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||||||||||| ||| |||||||||||||||    
T  26130173 ctccacaattaaattgtgttagctttagtcactagactacttga 26130130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 27510248 - 27510205
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  27510248 ctccacaattaaattgtgtgagctctagccactaggctacttga 27510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 28547772 - 28547729
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28547772 ctccacaattaaattgtgtgagctctagccactaggctacttga 28547729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 29617484 - 29617527
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  29617484 ctccacaattaaattgtgtgagctctagccactaggctacttga 29617527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 31026298 - 31026341
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  31026298 ctccacaattaaattgtgtgagctctagccactaggctacttga 31026341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 32619429 - 32619472
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  32619429 ctccacaattaaattgtgtgagctctagccactaggctacttga 32619472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 35645678 - 35645721
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  35645678 ctccacaattaaattgtgtgagctctagccactaggctacttga 35645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 35950207 - 35950250
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  35950207 ctccacaattaaattgtgtgagctctagccactaggctacttga 35950250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 43119423 - 43119380
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  43119423 ctccacaattaaattgtgtgagctctagccactaggctacttga 43119380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 44616681 - 44616724
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  44616681 ctccacaattaaattgtgtgagctctaaccactagactacttga 44616724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 46534739 - 46534696
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  46534739 ctccacaattaaattgtgtgagctctagccattagactacttga 46534696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 338
Target Start/End: Original strand, 23817192 - 23817238
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggt 338  Q
    ||||| ||||||||||||||| |||||||||| ||||||||| ||||    
T  23817192 tgagcttaactcaattggtagggatattgcatgttatatgtaggggt 23817238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 28444155 - 28444109
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||| ||||| ||||||| ||||||||||||| ||||||||||||    
T  28444155 atccccgtgagcttaactcagttggtagagatatcgcattttatatg 28444109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 399
Target Start/End: Original strand, 3532661 - 3532698
Alignment:
Q  362 acaactaaattgtgttagctctagccactagactactt 399  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  3532661 acaattaaattgtgtgagctctagccactagactactt 3532698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 331
Target Start/End: Complemental strand, 4232402 - 4232369
Alignment:
Q  298 taactcaattggtagagatattgcattttatatg 331  Q
    |||||||||||||||||||||||||| |||||||    
T  4232402 taactcaattggtagagatattgcatattatatg 4232369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 35815833 - 35815902
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc 352  Q
    |||||||| ||||| || |||| ||||||| ||||| |||||||||||| | ||||  ||||||||||||    
T  35815833 ttatccccgtgagcttagctcagttggtagggatatcgcattttatatgcaggggtcggggttcgaatcc 35815902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 5073262 - 5073310
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||||| ||||| ||||||| ||||||||||||||| || |||||||    
T  5073262 ttatccccgtgagcttaactcagttggtagagatattgtatattatatg 5073310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 9497979 - 9498027
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||||||||| |||||||||| ||||||||| ||||  |||||||||    
T  9497979 ctcaattggtagggatattgcatattatatgtaggggtcggggttcgaa 9498027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 15074894 - 15074854
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactact 398  Q
    |||||||| |||||| ||| |||||||||||||||||||||    
T  15074894 ctccacaattaaattatgtgagctctagccactagactact 15074854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 398
Target Start/End: Complemental strand, 24732542 - 24732502
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactact 398  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  24732542 ctccacaattaaattgtgtgagctctagccattagactact 24732502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 26801717 - 26801677
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  26801717 cacaattaaattgtgtgagctctagccactaggctacttga 26801677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 27634013 - 27634053
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  27634013 cacaattaaattgtgtaagctctagccacgagactacttga 27634053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 28424319 - 28424279
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||| ||||||||||||||||    
T  28424319 cacaattaaattgtgtgagctctaaccactagactacttga 28424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 35645594 - 35645642
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    ||||||||||||||||| |||| ||||||| ||||||| || |||||||    
T  35645594 ttatccccatgagcgtagctcagttggtagggatattgtatattatatg 35645642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 35683193 - 35683121
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||| || |||| ||||||| ||||| |||||||||||| | ||||  ||||||||| ||||||||||||||    
T  35683193 tgagcttagctcagttggtagggatatcgcattttatatgcaggggtcggggttcgaactccggacactccac 35683121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 49089589 - 49089621
Alignment:
Q  369 aattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||||||||||||||||||||    
T  49089589 aattgtgtgagctctagccactagactacttga 49089621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 266772 - 266653
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccg-gacactccacaactaaattgtgttagct 381  Q
    |||||||| ||||| || |||| ||||||| |||||||||| ||||||| | | |   ||||||||| ||  |||||||||||| |||||||||| ||||    
T  266772 ttatccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaaacccagacactccacaattaaattgtgtgagct 266673  T
Q  382 ctagccactagactacttga 401  Q
    ||||||||||| ||||||||    
T  266672 ctagccactaggctacttga 266653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 3190006 - 3189907
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||| ||||||| |||||||||| ||||||| |  |||  ||||||||| || ||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  3190006 ctcagttggtagggatattgcatattatatgca--ggtcggggttcgaaccccggacactccacaattaaattgtgtgagctctagccactaggctactt 3189909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 43656032 - 43656158
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatc-cggaca--------ctccacaactaaattgt 374  Q
    ||||||| ||||| || |||| ||||||| |||||||||| ||||||||| ||||  ||||||||| | ||||||        |||||||| | ||||||    
T  43656032 tatccccgtgagcttagctcagttggtagggatattgcatattatatgtaggggtcggggttcgaacctcggacattccacttctccacaatttaattgt 43656131  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||||||||||||||||||||    
T  43656132 gtgagctctagccactagactacttga 43656158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12216 - 12173
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  12216 ctccacaattaaattgtgttagctctagtcactagactacttga 12173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 6942522 - 6942479
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  6942522 ctccacaattaaattgtgtgagctctagccactagactacttga 6942479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 38344128 - 38344171
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  38344128 ctccacaattaaattgtgtgagctctagccactagactacttga 38344171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 43283957 - 43283914
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  43283957 ctccacaattaaattgtgtgagctctagccactagactacttga 43283914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 44673638 - 44673596
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  44673638 tccacaattaaattgtgtgagctctagccactagactacttga 44673596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 5332995 - 5333036
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  5332995 ctccacaattaaattgtgtgagctctagccactagactactt 5333036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 9070800 - 9070719
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatc-cggacactccac 363  Q
    |||||| | ||||| ||||||| || |||| ||||| |||||||||||||| |||| |||||||||| | ||||||||||||    
T  9070800 ttatcctcgtgagcttaactcagttagtagggatatcgcattttatatgtaggggtcagggttcgaacctcggacactccac 9070719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 11491876 - 11491917
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  11491876 ctccacaattaaattgtgtgagctctagccactagactactt 11491917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 8698646 - 8698586
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc 352  Q
    ||||| || |||| ||||||| |||||||||| ||||||||| ||||| ||||||||||||    
T  8698646 tgagcttagctcagttggtagggatattgcatattatatgtaggggttggggttcgaatcc 8698586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 349
Target Start/End: Original strand, 36540284 - 36540348
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||| ||||| ||||||| ||||||| |||||||||||||||||| | ||||  |||||||||    
T  36540284 atccccgtgagcttaactcagttggtagggatattgcattttatatgcaggggtcggggttcgaa 36540348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 39587544 - 39587669
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaattgtg 375  Q
    |||||| ||||| || |||| |||||||||||||||||||||||||  | ||||  || |||||| || |||||||||||        || |||||||||    
T  39587544 atccccgtgagcttagctcagttggtagagatattgcattttatattcaggggtcgggattcgaaccctggacactccacttctccacaattaaattgtg 39587643  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||||||| ||||||||    
T  39587644 tgagctctagccactaggctacttga 39587669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 43403289 - 43403414
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggaca--------ctccacaactaaattgtg 375  Q
    ||||| |||||| ||| ||| |||||||||||||||||| ||||||||| ||| | | ||||||| |  |||||        |||||||| |||||||||    
T  43403289 atccctatgagcttaattcagttggtagagatattgcatattatatgtaggggctggagttcgaaccttggacatcccacttctccacaattaaattgtg 43403388  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||| ||||||||||||||    
T  43403389 tgagctctagctactagactacttga 43403414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 257618 - 257661
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  257618 ctccacaattaaattgtgtgagctctagccactaggctacttga 257661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 658302 - 658259
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  658302 ctccacaattaaattgtgtgagctctagccactaggctacttga 658259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 844038 - 843995
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  844038 ctccacaattaaattgtgtgagctctagccactaggctacttga 843995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 2787072 - 2787029
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2787072 ctccacaattaaattgtgtgagctctagccactaggctacttga 2787029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 5570973 - 5571016
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||    
T  5570973 ctccacaattaaattatgtgagctctagccactagactacttga 5571016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 7816482 - 7816525
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  7816482 ctccacaattaaattgtgtgagctctagccactaggctacttga 7816525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 9187214 - 9187171
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  9187214 ctccacaattaaattgtgtgagctctagccactaggctacttga 9187171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 10568164 - 10568207
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10568164 ctccacaattaaattgtgtgagctctagccactaggctacttga 10568207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 10736865 - 10736822
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10736865 ctccacaattaaattgtgtgagctctagccactaggctacttga 10736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 10761898 - 10761941
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10761898 ctccacaattaaattgtgtgagctctagccactaggctacttga 10761941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 13647448 - 13647405
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  13647448 ctccacaatttaattgtgtgagctctagccactagactacttga 13647405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 13747873 - 13747830
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  13747873 ctccacaatttaattgtgtgagctctagccactagactacttga 13747830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 17027872 - 17027829
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17027872 ctccacaattaaattgtgtgagctctagccactaggctacttga 17027829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 17072554 - 17072511
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17072554 ctccacaattaaattgtgtgagctctagccactaggctacttga 17072511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 17558308 - 17558265
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17558308 ctccacaattaaattgtgtgagctctagccactaggctacttga 17558265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 17575717 - 17575760
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17575717 ctccacaattaaattgtgtgagctctagccactaggctacttga 17575760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 17698601 - 17698644
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17698601 ctccacaattaaattgtgtgagctctagccactaggctacttga 17698644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 18926126 - 18926083
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  18926126 ctccacaattaaattgtgtgagctctagccattagactacttga 18926083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 21133086 - 21133129
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  21133086 ctccacaattaaattgtgtgagctctagccactagtctacttga 21133129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 24480812 - 24480769
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||    
T  24480812 ctccacaattaaattatgtgagctctagccactagactacttga 24480769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 28909544 - 28909587
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28909544 ctccacaattaaattgtgtgagctctagccactaggctacttga 28909587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 29170844 - 29170887
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| || |||||||||||||||||||||    
T  29170844 ctccacaattaaattgtgtgagttctagccactagactacttga 29170887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 29514705 - 29514748
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  29514705 ctccacaattaaattgtgtgagctctagccactaggctacttga 29514748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 31450948 - 31450905
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  31450948 ctccacaattaaattgtgtgagctctagccactaggctacttga 31450905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 33838403 - 33838446
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  33838403 ctccacaattaaattgtgtgagctctagccactaggctacttga 33838446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 34266091 - 34266134
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  34266091 ctccacaattaaattgtgtgagctctagccactaggctacttga 34266134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 37717442 - 37717485
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  37717442 ctccacaattaaattgtgtgagctctagccactaggctacttga 37717485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 38219559 - 38219516
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  38219559 ctccacaattaaattgtgtgagctctagccactaggctacttga 38219516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 43186932 - 43186975
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  43186932 ctccacaattaaattgtgtgagctctagccactaggctacttga 43186975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 5326243 - 5326197
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||| ||||| || |||| ||||||||||||||||||||||||||    
T  5326243 atccccgtgagcttagctcagttggtagagatattgcattttatatg 5326197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 11127982 - 11128024
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||    
T  11127982 tccacaattaaattgtgtgagctctagccactaggctacttga 11128024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 26280857 - 26280811
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    |||||| ||||| ||||||| ||||||| ||||||||||||||||||    
T  26280857 atccccgtgagcttaactcagttggtagggatattgcattttatatg 26280811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 34472377 - 34472419
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||    
T  34472377 tccacaattaaattgtgtgagctctaaccactagactacttga 34472419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 37291001 - 37291042
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  37291001 ctccacaattaaattgtgtgagctctagccactaggctactt 37291042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 40322937 - 40322884
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaaggg 337  Q
    ||||||| ||||| |  |||| |||||||| |||||||||||||||||||||||    
T  40322937 tatccccgtgagcttggctcagttggtagaaatattgcattttatatgtaaggg 40322884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 363
Target Start/End: Complemental strand, 43856453 - 43856376
Alignment:
Q  287 ccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    |||| ||||| ||||||| ||||||| |||||||||||||||||| | |||   |||||||||  |||||||||||||    
T  43856453 ccccgtgagcttaactcagttggtagggatattgcattttatatgcaggggccggggttcgaaccccggacactccac 43856376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 3227313 - 3227349
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagac 394  Q
    |||||||| |||||||||| |||||||||||||||||    
T  3227313 ctccacaattaaattgtgtgagctctagccactagac 3227349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 349
Target Start/End: Original strand, 22487888 - 22487936
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||| ||||||| |||||||||||||||||| ||||||| |||| ||||    
T  22487888 ctcagttggtagggatattgcattttatatgcaagggttggggtacgaa 22487936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 24458406 - 24458438
Alignment:
Q  369 aattgtgttagctctagccactagactacttga 401  Q
    |||||||| ||||||||||||||||||||||||    
T  24458406 aattgtgtgagctctagccactagactacttga 24458438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 43287330 - 43287282
Alignment:
Q  303 caattggtagagatattgcattttatatgtaagggttagggttcgaatc 351  Q
    |||||||||||||||||| |||||||||||| ||| | ||||| |||||    
T  43287330 caattggtagagatattgtattttatatgtatgggctggggtttgaatc 43287282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 44089012 - 44088965
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||| |||||||||||||||||| |||||||| ||||| ||||||||||    
T  44089012 ctcagttggtagagatattgcatgttatatgt-agggtaagggttcgaa 44088965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 4408355 - 4408472
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatc-cggacactccacaactaaattgtgttagctct 383  Q
    |||||| ||||| || |||| ||||||| |||||||||| ||||||| | ||| | ||||||||| | | |||||||||||| | |||||||| ||||||    
T  4408355 atccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccacagacactccacaatttaattgtgtgagctct 4408454  T
Q  384 agccactagactacttga 401  Q
     |||||||| ||||||||    
T  4408455 ggccactaggctacttga 4408472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 399
Target Start/End: Complemental strand, 894684 - 894590
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccactagactactt 399  Q
    ||||||| |||||||||| ||||||| | ||||   |||||||| || ||||||||||||| | |||||||| ||||||||||||| ||||||||    
T  894684 ttggtagggatattgcatattatatgcaggggtcgaggttcgaaccccggacactccacaatttaattgtgtgagctctagccactggactactt 894590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 2816887 - 2817012
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacac--------tccacaactaaattgtg 375  Q
    |||||||||||| || |||||||||||| |||||||||| ||||||| | ||| |  | |||||| |||||||||        ||||||| |||||||||    
T  2816887 atccccatgagcttagctcaattggtagggatattgcatgttatatgcaggggctgagattcgaactccggacaccccacttctccacaattaaattgtg 2816986  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||||||| ||||||||    
T  2816987 tgagctctagccactaggctacttga 2817012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 7545408 - 7545451
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  7545408 ctccacaattaaattgtgtgagctctagccactagactacttga 7545451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 12284200 - 12284243
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  12284200 ctccacaattaaattgtgtgagctctagccactagactacttga 12284243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 22997415 - 22997458
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  22997415 ctccacaattaaattgtgtgagctctagccactagactacttga 22997458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 23790986 - 23790943
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  23790986 ctccacaattaaattgtgtgagctctagccactagactacttga 23790943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 31802132 - 31802175
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  31802132 ctccacaattaaattgtgtgagctctagccactagactacttga 31802175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 31803586 - 31803543
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  31803586 ctccacaattaaattgtgtgagctctagccactagactacttga 31803543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 10517195 - 10517321
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaattgt 374  Q
    ||||||| ||||| || |||| ||||||  |||||||||||||||||| | ||||  ||||||||| || |||||||||||        || ||||||||    
T  10517195 tatccccgtgagcttagctcagttggtatggatattgcattttatatgcaggggtcggggttcgaaccccggacactccacttctccacaattaaattgt 10517294  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||||||||||| ||||||||    
T  10517295 gtgagctctagccactaggctacttga 10517321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 401
Target Start/End: Original strand, 22574866 - 22574992
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccgg-acactccac--------aactaaattgt 374  Q
    ||||||| ||||| || |||| ||||||| ||||| |||||||||||| | ||||| ||||||||| || | |||||||||        || ||||||||    
T  22574866 tatccccgtgagcttagctcagttggtagggatatcgcattttatatgcaggggttggggttcgaaccccgcacactccacttctccacaattaaattgt 22574965  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||| ||||||||||||||||    
T  22574966 gtgagctctaaccactagactacttga 22574992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 24758735 - 24758800
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    ||||||| ||||| ||||||||||||||| ||||| |||||||||||| | ||||  |||||||||    
T  24758735 tatccccgtgagcttaactcaattggtagggatatcgcattttatatgcaggggtcggggttcgaa 24758800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 743642 - 743685
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||  ||||||||||||||||||||||||    
T  743642 ctccacaattaaattgtgcgagctctagccactagactacttga 743685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 3640593 - 3640636
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  3640593 ctccacaatttaattgtgtgagctctagccactagactacttga 3640636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 3794164 - 3794121
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  3794164 ctccacaattaaattgtgtgagctctagccactaggctacttga 3794121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 5052065 - 5052022
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  5052065 ctccacaattaaattgtgtgagctctagccactaggctacttga 5052022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 7207923 - 7207966
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  7207923 ctccacaattaaattgtgtgagctctagccactaggctacttga 7207966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 7328638 - 7328595
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  7328638 ctccacaattaaattgtgtgagctctagccactaggctacttga 7328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 7581123 - 7581166
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  7581123 ctccacaattaaattgtgtgagctctagccactaggctacttga 7581166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 8857162 - 8857205
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  8857162 ctccacaattaaattgtgtgagctctagccactaggctacttga 8857205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 9704495 - 9704538
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  9704495 ctccacaattaaattgtgtgagctctagccactaggctacttga 9704538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 13116615 - 13116572
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  13116615 ctccacaattaaattgtgtgagctctagccactaggctacttga 13116572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 17441830 - 17441787
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17441830 ctccacaattaaattgtgtgagctctagccactaggctacttga 17441787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 19953819 - 19953776
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  19953819 ctccacaattaaattgtgtgagctctagccactaggctacttga 19953776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 20584152 - 20584195
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  20584152 ctccacaattaaattgtgtgagctctagccattagactacttga 20584195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 26347483 - 26347526
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  26347483 ctccacaatttaattgtgtgagctctagccactagactacttga 26347526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 27218963 - 27219006
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  27218963 ctccacaattaaattgtgtgagctctagccactaggctacttga 27219006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 28148724 - 28148681
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28148724 ctccacaattaaattgtgtgagctctagccactaggctacttga 28148681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 32611545 - 32611502
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  32611545 ctccacaattaaattgtgtgagctctagccactaggctacttga 32611502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 33573896 - 33573939
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  33573896 ctccacaattaaattgtgtgagctctagccactaggctacttga 33573939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 33646914 - 33646957
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  33646914 ctccacaattaaattgtgtgagctctagccactaggctacttga 33646957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 33697186 - 33697107
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggacactccac 363  Q
    |||||| ||||| ||||||| ||| ||| |||||||||||||||||| | ||||  | |||||||| |||||||||||||    
T  33697186 atccccgtgagcttaactcagttgatagggatattgcattttatatgcaggggtcggagttcgaatcccggacactccac 33697107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 401
Target Start/End: Original strand, 607250 - 607300
Alignment:
Q  351 ccggacactccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||||||||||| |||||||||  | ||||||||||||| ||||||||    
T  607250 ccggacactccacaattaaattgtggaaactctagccactaggctacttga 607300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 14709072 - 14709014
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    |||||||||||||||||| ||||||||| |||   ||||||||| ||||||||||||||    
T  14709072 ttggtagagatattgcatattatatgtaggggccggggttcgaactccggacactccac 14709014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 20728961 - 20729027
Alignment:
Q  298 taactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||||| || ||||||||||||||| |||||||||||||   ||||||||| || |||||||||||    
T  20728961 taactcagttagtagagatattgcatattatatgtaagggccggggttcgaattctggacactccac 20729027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 24618489 - 24618447
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  24618489 tccacaattaaattgtgtgagttctagccactagactacttga 24618447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 28842734 - 28842776
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||||||||| ||||||||    
T  28842734 tccacaattaaattgtgtgagctctagccactaggctacttga 28842776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 10483611 - 10483530
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    |||||||| ||| | || |||| ||||||| |||||||||||||||||| | ||||  |||||||||  |||||||||||||    
T  10483611 ttatccccgtgatcttagctcagttggtagggatattgcattttatatgcaggggtcggggttcgaaccccggacactccac 10483530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 11301449 - 11301489
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||||| ||||||||||||||    
T  11301449 cacaattaaattgtgtgagctctagcaactagactacttga 11301489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 17454819 - 17454739
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||||| ||||| || |||| |||||||||||||||||| ||||||| | | ||  |||||||||  |||||||||||||    
T  17454819 tatccccgtgagcttatctcagttggtagagatattgcatattatatgcaggagtcggggttcgaaccccggacactccac 17454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 31935103 - 31935175
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||| || |||| ||||||| |||||||||||||||||| | ||||  |||||||||  |||||||||||||    
T  31935103 tgagcttagctcagttggtagggatattgcattttatatgcaggggtcggggttcgaaccccggacactccac 31935175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 3269616 - 3269733
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctct 383  Q
    |||||| ||||| || |||| ||||||| |||||||||| ||||||| | ||| | ||||||||| || ||||| ||||||| | |||||||| || |||    
T  3269616 atccccgtgagcttagctcagttggtagggatattgcatattatatgcaggggctggggttcgaaccctggacagtccacaatttaattgtgtgagttct 3269715  T
Q  384 agccactagactacttga 401  Q
    ||||||||| ||||||||    
T  3269716 agccactaggctacttga 3269733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 46021955 - 46021835
Alignment:
Q  282 attatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagc 380  Q
    ||||||||| |||||||| |||| |  |||| |||||||||| ||||||| | | |   ||||||||| || ||||||||||||| |||||||| | |||    
T  46021955 attatccccgtgagcgtagctcagtaagtagggatattgcatattatatgcaggagccggggttcgaaccccggacactccacaattaaattgtatgagc 46021856  T
Q  381 tctagccactagactacttga 401  Q
    |||||||||||| ||||||||    
T  46021855 tctagccactaggctacttga 46021835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 401
Target Start/End: Original strand, 44732628 - 44732755
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacac--------tccacaactaaattg 373  Q
    |||||||| ||||| ||||||| ||||||| |||||||||| ||||||| |||||   ||||||||| || ||||||        ||||||| |||||||    
T  44732628 ttatccccgtgagcttaactcagttggtagggatattgcatattatatgcaagggccggggttcgaaccccggacaccccacttctccacaattaaattg 44732727  T
Q  374 tgttagctctagccactagactacttga 401  Q
    ||| | ||||||||||||||||||||||    
T  44732728 tgtgaactctagccactagactacttga 44732755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 27642718 - 27642675
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  27642718 ctccacaattaaattgtgtgagctctagccactagactacttga 27642675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 29188715 - 29188758
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  29188715 ctccacaattaaattgtgtgagctctagccactagactacttga 29188758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 46225391 - 46225498
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccggacactccacaactaaattgtgttagctctagccacta 391  Q
    ||||| || |||| ||||||| |||||||||||||||||| | ||||  |||||| ||| |     |||||||| |||||||||| ||||||||||| ||    
T  46225391 tgagcttagctcagttggtagggatattgcattttatatgcaggggtcggggttcaaattccacttctccacaattaaattgtgtgagctctagccatta 46225490  T
Q  392 gactactt 399  Q
    ||||||||    
T  46225491 gactactt 46225498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 30360430 - 30360488
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    |||||||||||||||||||||||||||| ||||  |||||||||  |||||||||||||    
T  30360430 ttggtagagatattgcattttatatgtaggggtcggggttcgaaccccggacactccac 30360488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 1836500 - 1836617
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccg-gacactccacaactaaattgtgttagctct 383  Q
    |||||| ||||| || |||| ||||||| |||||| ||| ||||||| | |||| | | |||||| ||  |||||||||||| | |||||||| || | |    
T  1836500 atccccgtgagcttagctcagttggtagggatattacatattatatgcaggggtcaagattcgaaccctagacactccacaatttaattgtgtgagtttt 1836599  T
Q  384 agccactagactacttga 401  Q
    ||||||||||||||||||    
T  1836600 agccactagactacttga 1836617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 18534005 - 18534123
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaattgtgttagctc 382  Q
    ||||| || |||| |||||||||||||||||| ||||||||| | ||  ||||||||| || |||||||||||        || |||||||||| |||||    
T  18534005 tgagcttagctcagttggtagagatattgcatattatatgtaggagtcggggttcgaaccccggacactccacttctccacaattaaattgtgtgagctc 18534104  T
Q  383 tagccactagactacttga 401  Q
    |||||||||| ||||||||    
T  18534105 tagccactaggctacttga 18534123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 27344474 - 27344543
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc 352  Q
    |||||| | ||||| || |||| |||||||| ||||||||| ||||||||| ||| ||||||||||||||    
T  27344474 ttatcctcgtgagcttagctcagttggtagacatattgcatattatatgtaggggctagggttcgaatcc 27344543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 39922154 - 39922052
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaatccgga----cactccacaactaaattgtgttagctctagccactagacta 396  Q
    |||||||| |||||||||| ||| ||||||| | ||||||||||||||| || ||     |||| |||| |||||||||| |||||||| || |||||||    
T  39922154 ctcaattgttagagatattacatattatatgcaggggttagggttcgaaccccgaacactactctacaattaaattgtgtgagctctagacattagacta 39922055  T
Q  397 ctt 399  Q
    |||    
T  39922054 ctt 39922052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 298 - 363
Target Start/End: Complemental strand, 42127677 - 42127612
Alignment:
Q  298 taactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccggacactccac 363  Q
    ||||||||||||||  |||||||||| ||||||  |||||| |||||| ||| |||||||||||||    
T  42127677 taactcaattggtatggatattgcatattatatacaagggtcagggtttgaacccggacactccac 42127612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 17776837 - 17776962
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatc-cggaca--------ctccacaactaaattgtg 375  Q
    |||||||||||  || |||| |||||||  ||||||||||||||||| | |||| |||||||||| | ||||||        |||||||| |||||||||    
T  17776837 atccccatgagtttagctcagttggtaggcatattgcattttatatgcaggggtcagggttcgaacctcggacatttcacttctccacaattaaattgtg 17776936  T
Q  376 ttagctctagccactagactacttga 401  Q
      ||||||||||||||| ||||||||    
T  17776937 cgagctctagccactaggctacttga 17776962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 34656452 - 34656343
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaatc-cggaca--------ctccacaactaaattgtgttagctctagccacta 391  Q
    |||| ||| |||||||||||||||||||||| | ||||| ||||||||| | ||||||        |||||||| |||||||||| |||||||||||||     
T  34656452 ctcagttgatagagatattgcattttatatgcaggggttggggttcgaacctcggacactccacttctccacaattaaattgtgtgagctctagccactg 34656353  T
Q  392 gactacttga 401  Q
    || |||||||    
T  34656352 gattacttga 34656343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 1570183 - 1570140
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  1570183 ctccacaattaaattgtgtgagctctagccactaggctacttga 1570140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 2277833 - 2277876
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2277833 ctccacaattaaattgtgtgagctctagccactaggctacttga 2277876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 2754439 - 2754482
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||||| |||||||||    
T  2754439 ctccacaattaaattgtgtgagctctagccactaaactacttga 2754482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 3560372 - 3560329
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  3560372 ctccacaatttaattgtgtgagctctagccactagactacttga 3560329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 4482589 - 4482546
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  4482589 ctccacaattaaattgtgtgagctctagccactaggctacttga 4482546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 6438055 - 6438012
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  6438055 ctccacaattaaattgtgtgagctctagccactaggctacttga 6438012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 280 - 331
Target Start/End: Complemental strand, 6893315 - 6893264
Alignment:
Q  280 tgattatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    ||||||||||| ||||| || |||| ||||||| ||||||||||||||||||    
T  6893315 tgattatccccgtgagcttagctcagttggtagggatattgcattttatatg 6893264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 7191111 - 7191154
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  7191111 ctccacaattaaattgtgtgagctctagccactagcctacttga 7191154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 8984497 - 8984454
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  8984497 ctccacaattaaattgtgtgagctctagccactaggctacttga 8984454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 398
Target Start/End: Complemental strand, 9866174 - 9866135
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactact 398  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  9866174 tccacaattaaattgtgtgagctctagccactagactact 9866135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12048115 - 12048072
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12048115 ctccacaattaaattgtgtgagctctagccactaggctacttga 12048072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12502245 - 12502202
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12502245 ctccacaattaaattgtgtgagctctagccactaggctacttga 12502202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12650375 - 12650332
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12650375 ctccacaattaaattgtgtgagctctagccactaggctacttga 12650332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 13773247 - 13773290
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  13773247 ctccacaattaaattgtgtgagctctagccactaggctacttga 13773290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 15819592 - 15819549
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  15819592 ctccacaattaaattgtgtgagctctagccactaggctacttga 15819549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 16313697 - 16313654
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||  ||||||||||||||||||||||||    
T  16313697 ctccacaattaaattgtgggagctctagccactagactacttga 16313654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 21265735 - 21265778
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  21265735 ctccacaattaaattgtgtgagctctagccactaggctacttga 21265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 25999929 - 25999972
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||||||| |||||||    
T  25999929 ctccacaattaaattgtgtgagctctagccactagattacttga 25999972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 26550572 - 26550615
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||    
T  26550572 ctccacaattaaattgtgttagctctaaccactaggctacttga 26550615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 27818647 - 27818690
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  27818647 ctccacaattaaattgtgtgagctctagccactaggctacttga 27818690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 27871009 - 27871052
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  27871009 ctccacaattaaattgtgtaagctctagccactaggctacttga 27871052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 28564336 - 28564293
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28564336 ctccacaattaaattgtgtgagctctagccactaggctacttga 28564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 32594330 - 32594373
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  32594330 ctccacaattaaattgtgtgagctctagccactaggctacttga 32594373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 40519534 - 40519491
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  40519534 ctccacaattaaattgtgtgagctctagccactaggctacttga 40519491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 43884873 - 43884916
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| || |||||||||||||||||||||    
T  43884873 ctccacaattaaattgtgtgagttctagccactagactacttga 43884916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 48638526 - 48638593
Alignment:
Q  282 attatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    ||||||||| ||||| || |||| ||||||| |||||||||||||||||| | ||| | |||||||||    
T  48638526 attatccccgtgagcttagctcagttggtagggatattgcattttatatgcaggggctggggttcgaa 48638593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 52369676 - 52369719
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  52369676 ctccataattaaattgtgtgagctctagccactagactacttga 52369719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 12374566 - 12374508
Alignment:
Q  305 attggtagagatattgcattttatatgtaagggttagggttcgaatccggacactccac 363  Q
    ||||| ||||||||||||| ||||||| ||||||  ||||||||| |||||||| ||||    
T  12374566 attggcagagatattgcatattatatgcaagggtcggggttcgaacccggacaccccac 12374508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 25540976 - 25541034
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaatc-cggacactccac 363  Q
    ||||||| |||||||| ||||||||||| ||||  ||||||||||| ||||||||||||    
T  25540976 ttggtagggatattgcgttttatatgtaggggtcggggttcgaatctcggacactccac 25541034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 331
Target Start/End: Original strand, 15775733 - 15775782
Alignment:
Q  282 attatccccatgagcgtaactcaattggtagagatattgcattttatatg 331  Q
    ||||| ||| ||||| ||||||||||||||| |||||||||| |||||||    
T  15775733 attattcccgtgagcttaactcaattggtagggatattgcatattatatg 15775782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 32970792 - 32970751
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  32970792 ctccacaattaaattgtgtgagctctagccactaggctactt 32970751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 48643704 - 48643745
Alignment:
Q  360 ccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||| |||||||||| ||||||||||||||| ||||||||    
T  48643704 ccacaattaaattgtgtgagctctagccactaggctacttga 48643745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 6213503 - 6213543
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| || |||||||||||||||||||||    
T  6213503 cacaattaaattgtgtgagttctagccactagactacttga 6213543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 44019280 - 44019352
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggacactccac 363  Q
    ||||| || |||| ||| ||| |||||||||||||||||| ||||||  || ||||||| |||||||||||||    
T  44019280 tgagcttagctcagttgatagggatattgcattttatatgcaagggtcgggattcgaatcccggacactccac 44019352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 399
Target Start/End: Original strand, 9661563 - 9661662
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||| ||||||  |||||||||| ||||||||||| ||  | ||||||| || ||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  9661563 ctcagttggtatggatattgcatattatatgtaagagtcggagttcgaaccccggacactccacaattaaattgtatgagctctagccactaggctactt 9661662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 401
Target Start/End: Complemental strand, 40994169 - 40994051
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggaca--------ctccacaactaaattgtgttagctc 382  Q
    ||||| || |||| ||||||| |||||||||| ||||||||| | ||| |||||||||| |||||||        |||||||| |||||||||| |||||    
T  40994169 tgagcttagctcagttggtagggatattgcatattatatgtaggagttggggttcgaatcccggacactccacttctccacaattaaattgtgtgagctc 40994070  T
Q  383 tagccactagactacttga 401  Q
    |||||||||| ||||||||    
T  40994069 tagccactaggctacttga 40994051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 44602482 - 44602599
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccacaactaaattgtgttagctct 383  Q
    |||||| ||||| || |||| ||||||| |||||||||||||||||| | |||   |||||||||  || | |||||||||| | |||||||| ||||||    
T  44602482 atccccgtgagcttagctcagttggtagggatattgcattttatatgcaggggccggggttcgaaccccagccactccacaatttaattgtgtgagctct 44602581  T
Q  384 agccactagactacttga 401  Q
    | ||||||| ||||||||    
T  44602582 acccactaggctacttga 44602599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 10402438 - 10402563
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacac--------tccacaactaaattgtg 375  Q
    |||||| ||||| ||||||| |||||||||||||||||| ||||||| | ||||  | ||||||| || ||||||        ||||||| |||||||||    
T  10402438 atccccgtgagcttaactcagttggtagagatattgcatattatatgcaggggtcggagttcgaaccccggacacctcacttctccacaattaaattgtg 10402537  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||||||| ||||||||    
T  10402538 tgagctctagccactaggctacttga 10402563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 10417294 - 10417169
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacactccac--------aactaaattgtg 375  Q
    |||||||||||| || |||| ||||||| |||||| ||| ||||||| | | || |||||||||| || |||||||||||        || |||||||||    
T  10417294 atccccatgagcttagctcagttggtagggatattacatattatatgcaggagtcagggttcgaaccccggacactccacttctccacaattaaattgtg 10417195  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||||||||||||||||    
T  10417194 tgagctctagccactagactacttga 10417169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 34040432 - 34040504
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||| || |||| ||| |||| ||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  34040432 tgagcttagctcagttgatagaaatattgcattttatatgtaggggtcagggttcgaactccggacactccac 34040504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 56088027 - 56087902
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggacac--------tccacaactaaattgtg 375  Q
    |||||||| ||| || |||| ||||||| |||||||||||||||||| | |||   |||||||||||| ||||||        ||||||| |||||||||    
T  56088027 atccccataagcttagctcagttggtagggatattgcattttatatgcaggggccggggttcgaatcccggacaccccacttctccacaattaaattgtg 56087928  T
Q  376 ttagctctagccactagactacttga 401  Q
    | || |||||||||||||||||||||    
T  56087927 tgagttctagccactagactacttga 56087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 39696329 - 39696286
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  39696329 ctccacaattaaattgtgtgagctctagccactagactacttga 39696286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 55021633 - 55021676
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  55021633 ctccacaattaaattgtgtgagctctagccactagactacttga 55021676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 7686337 - 7686210
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatcc-ggaca--------ctccacaactaaattg 373  Q
    |||||||| ||||| || |||| |||||||||||||||||||||||||| | |||   ||||||||| || |||||        |||||||| |||||||    
T  7686337 ttatccccgtgagcttagctcagttggtagagatattgcattttatatgcaggggccggggttcgaaccctggacactccacttctccacaattaaattg 7686238  T
Q  374 tgttagctctagccactagactacttga 401  Q
    ||| ||||||||||| ||| ||||||||    
T  7686237 tgtgagctctagccattaggctacttga 7686210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 26919543 - 26919416
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac--------aactaaattg 373  Q
    |||||||| ||||| || |||| ||||||| |||||||||| ||||||| | | | | ||||||||| ||||||||||||||        || |||||||    
T  26919543 ttatccccgtgagcttagctcagttggtagggatattgcatattatatgcaggagctggggttcgaactccggacactccacttcttcacaattaaattg 26919444  T
Q  374 tgttagctctagccactagactacttga 401  Q
    ||| ||||||||||||||| ||||||||    
T  26919443 tgtgagctctagccactaggctacttga 26919416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 43481112 - 43481034
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccggacactccac 363  Q
    |||||| ||||| ||||||| ||||||| ||||||||| |||||||| | |||   ||||||||| |||||||||||||    
T  43481112 atccccgtgagcttaactcagttggtagggatattgcactttatatgcaggggccggggttcgaacccggacactccac 43481034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 35465432 - 35465497
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat 350  Q
    |||||| ||||| || |||| ||||||| |||||||||||||||||  | ||||||||||||||||    
T  35465432 atccccgtgagcttagctcagttggtagggatattgcattttatatacaggggttagggttcgaat 35465497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 401
Target Start/End: Complemental strand, 12775296 - 12775187
Alignment:
Q  301 ctcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggaca--------ctccacaactaaattgtgttagctctagccacta 391  Q
    |||| ||||||| |||||||||||||||||| | |||| |||||||||| || |||||        |||||||| |||||||||| |||| || ||||||    
T  12775296 ctcagttggtagggatattgcattttatatgcaggggtcagggttcgaattctggacactccacttctccacaattaaattgtgtgagctttacccacta 12775197  T
Q  392 gactacttga 401  Q
    ||||||||||    
T  12775196 gactacttga 12775187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 13264262 - 13264222
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  13264262 cacaattaaattgtgtgagctctagccactagactacttga 13264222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 401
Target Start/End: Original strand, 40051619 - 40051744
Alignment:
Q  285 atccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaatccg-gacac--------tccacaactaaattgtg 375  Q
    |||||| ||||| || |||| ||||||| |||||||||| ||||||||| ||||  ||||||||| ||  |||||        ||||||| |||||||||    
T  40051619 atccccgtgagcttagctcagttggtagggatattgcatattatatgtaggggtaggggttcgaaccccagacaccccacttctccacaattaaattgtg 40051718  T
Q  376 ttagctctagccactagactacttga 401  Q
    | ||||||||||||||| ||||||||    
T  40051719 tgagctctagccactaggctacttga 40051744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 362
Target Start/End: Original strand, 42073154 - 42073233
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactcca 362  Q
    |||||||| ||| | || |||| ||||||||||||||||||||||||||| |||||  |||||||||  ||||||||||||    
T  42073154 ttatccccgtgaacttagctcacttggtagagatattgcattttatatgt-agggtccgggttcgaaccccggacactcca 42073233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 481597 - 481554
Alignment:
Q  306 ttggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||    
T  481597 ttggtagagatattgcatattatatgtaggggttggggttcgaa 481554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 2222618 - 2222661
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2222618 ctccacaattaaattgtgtgagctctagccactaggctacttga 2222661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 3036046 - 3036003
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  3036046 ctccacaattaaattgtgtgagctctagccactaggctacttga 3036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 5305001 - 5304958
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  5305001 ctccacaattaaattgtgtgagctctagccactaggctacttga 5304958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 9761194 - 9761237
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  9761194 ctccacaattaaattgtgtgagctctaaccactagactacttga 9761237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 10141062 - 10141105
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10141062 ctccacaattaaattgtgtgagctctagccactaggctacttga 10141105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12582019 - 12581976
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12582019 ctccacaattaaattgtgtgagctctagccactaggctacttga 12581976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 15208601 - 15208644
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  15208601 ctccacaattaaattgtgtgagctctagccaatagactacttga 15208644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 21935556 - 21935599
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||| |||||||||||||||||||    
T  21935556 ctccacaattaaattgtgtgagctttagccactagactacttga 21935599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 33325508 - 33325551
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||||||||||||| |||||||||    
T  33325508 ctccacaattaaattgtgtgagctctagccactaaactacttga 33325551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 35948174 - 35948131
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  35948174 ctccacaattaaattgtgtgagctctagccactaggctacttga 35948131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 37251192 - 37251235
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| | ||||||||||||||||||||||    
T  37251192 ctccacaattaaattgtgtgaactctagccactagactacttga 37251235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 37719079 - 37719122
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  37719079 ctccacaagtaaattgtgtgagctctagccactaggctacttga 37719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 41854212 - 41854255
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||    
T  41854212 ctccacaattaaattgtgtgagctccagccactagactacttga 41854255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 42395306 - 42395349
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| |||| |||||||||||||||||||    
T  42395306 ctccacaattaaattgtgtgagctttagccactagactacttga 42395349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 43147375 - 43147332
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  43147375 ctccacaattaaattgtgtgagctctagccactaggctacttga 43147332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 43596974 - 43597017
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  43596974 ctccacaattaaattgtgtgagctctagccactaggctacttga 43597017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 46775021 - 46774978
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  46775021 ctccacaattaaattgtgtgagctctagccactaggctacttga 46774978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 46998359 - 46998316
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  46998359 ctccacaattaaattgtgtgagctctagccattagactacttga 46998316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 47934063 - 47934020
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  47934063 ctccacaatttaattgtgtgagctctagccactagactacttga 47934020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 48950863 - 48950906
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  48950863 ctccacaattaaattgtgtgagctctagccactaggctacttga 48950906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 49757275 - 49757232
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  49757275 ctccacaattaaattgtgtgagctctagccactaggctacttga 49757232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 49901561 - 49901604
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  49901561 ctccacaattaaattgtgtgagctctagccactaggctacttga 49901604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 52731430 - 52731387
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  52731430 ctccacaattaaattgtgtgagctctagccactaggctacttga 52731387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 53634242 - 53634199
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  53634242 ctccacaattaaattgtgtgagctctagccactaggctacttga 53634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 55536458 - 55536501
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  55536458 ctccacaattaaattgtgtgagctctagccactaggctacttga 55536501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 401
Target Start/End: Complemental strand, 4234275 - 4234233
Alignment:
Q  359 tccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||    
T  4234275 tccacaattaaattgtgtgagctctagccattagactacttga 4234233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 25526446 - 25526520
Alignment:
Q  291 atgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccaca 364  Q
    |||||| ||||||| ||||||| ||||||| || ||||||||||| ||| || ||||||  ||||||||||||||    
T  25526446 atgagcttaactcagttggtagggatattgtatattatatgtaagcgttgggattcgaagcccggacactccaca 25526520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 10407020 - 10406979
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||||||||||| ||||||    
T  10407020 ctccacaattaaattgtgtgagctctagccactaggctactt 10406979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 349
Target Start/End: Original strand, 19594237 - 19594294
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa 349  Q
    ||||| ||||||| ||| |||||||||||||| ||||||||| |||  ||||||||||    
T  19594237 tgagcttaactcagttgatagagatattgcatattatatgtaggggccagggttcgaa 19594294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 399
Target Start/End: Complemental strand, 48825810 - 48825769
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactactt 399  Q
    |||||||| |||||||||| ||||||| ||||||||||||||    
T  48825810 ctccacaattaaattgtgtgagctctaaccactagactactt 48825769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 53376753 - 53376627
Alignment:
Q  284 tatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggaca--------ctccacaactaaattgt 374  Q
    |||||||  |||| || |||||||||||| |||||||||| ||||||| |||||   |||||||||  |||||||        |||||||| ||||| ||    
T  53376753 tatccccgcgagcttagctcaattggtagggatattgcatgttatatgcaagggccggggttcgaaccccggacactccacttctccacaattaaatcgt 53376654  T
Q  375 gttagctctagccactagactacttga 401  Q
    || ||||||||| ||||||||||||||    
T  53376653 gtgagctctagctactagactacttga 53376627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 6371196 - 6371236
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  6371196 cacaattaaattgtgtgagctctagccactaggctacttga 6371236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 36802165 - 36802213
Alignment:
Q  315 atattgcattttatatgtaagggttagggttcgaa-tccggacactcca 362  Q
    ||||||||||||||||||| ||||| | ||||||| |||||||||||||    
T  36802165 atattgcattttatatgtaggggttggagttcgaactccggacactcca 36802213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 401
Target Start/End: Complemental strand, 37921036 - 37920992
Alignment:
Q  357 actccacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||    
T  37921036 actccacaattaaattgtgtgaactctagcaactagactacttga 37920992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 50076 - 49998
Alignment:
Q  283 ttatccccatgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactc 360  Q
    |||| ||| ||||| ||||||| ||| ||| |||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  50076 ttattcccgtgagcttaactcagttgatagggatattgcatattatatgtaggggttagggttcgaactccggacactc 49998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 65853 - 65781
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaat-ccggacactccac 363  Q
    ||||| || |||| ||||||| |||||||||| ||||||||| ||||| |||||||||| |||||||||||||    
T  65853 tgagcttagctcagttggtagggatattgcatattatatgtaggggttggggttcgaatcccggacactccac 65781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 59862 - 59905
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  59862 ctccacaattaaattgtgtgagctctagccactagactacttga 59905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 2384 - 2341
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  2384 ctccacaattaaattgtgtgagctctagccactaggctacttga 2341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 3745 - 3788
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  3745 ctccacaattaaattgtgtgagctctagccactaggctacttga 3788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 9045 - 9088
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  9045 ctccacaattaaattgtgtgagctctagccactaggctacttga 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 12538 - 12581
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12538 ctccacaattaaattgtgtgagctctagccactaggctacttga 12581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 17699 - 17742
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  17699 ctccacaattaaattgtgtgagctctagccactaggctacttga 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 10817 - 10774
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  10817 ctccacaattaaattgtgtgagctctagccactaggctacttga 10774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Original strand, 112187 - 112230
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  112187 ctccacaattaaattgtgtgagctctagccactaggctacttga 112230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 12252 - 12209
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttga 401  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  12252 ctccacaattaaattgtgtgagctctagccactaggctacttga 12209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 400
Target Start/End: Original strand, 12073 - 12115
Alignment:
Q  358 ctccacaactaaattgtgttagctctagccactagactacttg 400  Q
    |||||||| |||||||||| | |||||||||||||||||||||    
T  12073 ctccacaattaaattgtgtgaactctagccactagactacttg 12115  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 401
Target Start/End: Complemental strand, 17249 - 17209
Alignment:
Q  361 cacaactaaattgtgttagctctagccactagactacttga 401  Q
    ||||| |||||||||| ||||||||||||||| ||||||||    
T  17249 cacaattaaattgtgtgagctctagccactaggctacttga 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 1792 - 1720
Alignment:
Q  292 tgagcgtaactcaattggtagagatattgcattttatatgtaagggttagggttcgaa-tccggacactccac 363  Q
    ||||| |||||||  | |||| |||||| ||| ||||||||||||||| |||||||||  |||||||||||||    
T  1792 tgagcttaactcagctagtagggatattacatattatatgtaagggttggggttcgaaccccggacactccac 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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