View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11823_low_1 (Length: 651)

Name: NF11823_low_1
Description: NF11823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11823_low_1
NF11823_low_1
[»] chr4 (40 HSPs)
chr4 (21-255)||(13740255-13740488)
chr4 (21-268)||(21355727-21355983)
chr4 (21-219)||(23218223-23218421)
chr4 (21-219)||(45143890-45144088)
chr4 (21-219)||(45152659-45152857)
chr4 (22-222)||(54785192-54785403)
chr4 (21-222)||(47825813-47826024)
chr4 (21-222)||(21604330-21604542)
chr4 (21-222)||(46164369-46164581)
chr4 (21-222)||(8432983-8433195)
chr4 (535-635)||(21348420-21348520)
chr4 (27-200)||(33753972-33754142)
chr4 (25-132)||(38115443-38115557)
chr4 (21-117)||(14800000-14800096)
chr4 (363-401)||(5442447-5442485)
chr4 (363-401)||(23988253-23988291)
chr4 (363-401)||(27769120-27769158)
chr4 (363-401)||(32683135-32683173)
chr4 (363-401)||(48262131-48262169)
chr4 (364-401)||(32323126-32323163)
chr4 (220-255)||(23218439-23218474)
chr4 (220-255)||(45143837-45143872)
chr4 (220-255)||(45152606-45152641)
chr4 (363-401)||(37916864-37916902)
chr4 (363-401)||(50019247-50019285)
chr4 (363-401)||(51321923-51321961)
chr4 (363-401)||(54342203-54342241)
chr4 (364-401)||(29649131-29649168)
chr4 (363-400)||(38234660-38234697)
chr4 (364-401)||(49833973-49834010)
chr4 (365-401)||(37827533-37827569)
chr4 (365-401)||(41726162-41726198)
chr4 (363-398)||(5105001-5105036)
chr4 (505-540)||(21355529-21355564)
chr4 (367-401)||(48531925-48531959)
chr4 (363-401)||(49500640-49500678)
chr4 (363-393)||(54852661-54852691)
chr4 (21-78)||(3187589-3187646)
chr4 (363-392)||(16019913-16019942)
chr4 (363-399)||(37369432-37369468)
[»] chr8 (36 HSPs)
chr8 (21-219)||(1668023-1668221)
chr8 (21-219)||(16658738-16658936)
chr8 (21-219)||(38521229-38521424)
chr8 (25-218)||(6786356-6786550)
chr8 (21-222)||(22432294-22432506)
chr8 (21-222)||(29182578-29182790)
chr8 (21-222)||(27576667-27576885)
chr8 (21-222)||(774683-774896)
chr8 (21-112)||(22014860-22014951)
chr8 (21-132)||(11472358-11472476)
chr8 (54-147)||(43916091-43916184)
chr8 (21-117)||(42808687-42808783)
chr8 (168-222)||(22014748-22014802)
chr8 (165-222)||(780493-780550)
chr8 (25-117)||(33360397-33360489)
chr8 (165-222)||(18068479-18068536)
chr8 (21-73)||(780365-780417)
chr8 (81-140)||(34212961-34213020)
chr8 (363-401)||(14781248-14781286)
chr8 (363-401)||(18957834-18957872)
chr8 (363-401)||(32498947-32498985)
chr8 (363-401)||(34893414-34893452)
chr8 (363-401)||(37857933-37857971)
chr8 (364-401)||(44724898-44724935)
chr8 (365-401)||(9287608-9287644)
chr8 (220-255)||(38521442-38521477)
chr8 (363-401)||(4030443-4030481)
chr8 (363-401)||(18305077-18305115)
chr8 (367-401)||(19716983-19717017)
chr8 (367-401)||(42304745-42304779)
chr8 (220-251)||(16658689-16658720)
chr8 (367-401)||(10294516-10294550)
chr8 (363-401)||(16365333-16365371)
chr8 (363-397)||(20831080-20831114)
chr8 (363-401)||(39466634-39466672)
chr8 (365-401)||(31626356-31626392)
[»] chr3 (37 HSPs)
chr3 (21-219)||(52893349-52893547)
chr3 (21-219)||(2338819-2339015)
chr3 (21-166)||(21239406-21239551)
chr3 (21-222)||(9456318-9456530)
chr3 (535-635)||(50724024-50724124)
chr3 (535-635)||(50788725-50788825)
chr3 (22-117)||(40922976-40923071)
chr3 (22-117)||(2733793-2733888)
chr3 (363-401)||(10728125-10728163)
chr3 (363-401)||(11432603-11432641)
chr3 (363-401)||(17947276-17947314)
chr3 (363-401)||(27239327-27239365)
chr3 (363-401)||(36673260-36673298)
chr3 (365-401)||(20833954-20833990)
chr3 (365-401)||(37455892-37455928)
chr3 (220-255)||(2339033-2339068)
chr3 (220-255)||(21239338-21239373)
chr3 (362-401)||(54629909-54629948)
chr3 (367-401)||(10661244-10661278)
chr3 (363-401)||(18750691-18750729)
chr3 (363-401)||(45254555-45254593)
chr3 (363-401)||(50761222-50761260)
chr3 (363-401)||(50902418-50902456)
chr3 (363-401)||(52617087-52617125)
chr3 (364-401)||(48380206-48380243)
chr3 (363-398)||(7319139-7319174)
chr3 (363-398)||(24149837-24149872)
chr3 (366-401)||(51736870-51736905)
chr3 (81-140)||(4329855-4329916)
chr3 (363-401)||(31645364-31645402)
chr3 (363-401)||(39841555-39841593)
chr3 (363-401)||(40898124-40898162)
chr3 (367-401)||(44904961-44904995)
chr3 (182-219)||(21239391-21239428)
chr3 (364-401)||(23752504-23752541)
chr3 (363-400)||(34483199-34483236)
chr3 (363-391)||(26108496-26108524)
[»] chr2 (26 HSPs)
chr2 (21-219)||(3935375-3935573)
chr2 (27-215)||(38978382-38978570)
chr2 (21-222)||(25697570-25697782)
chr2 (27-77)||(32339602-32339652)
chr2 (363-401)||(214625-214663)
chr2 (363-401)||(379966-380004)
chr2 (363-401)||(10658486-10658524)
chr2 (363-401)||(18178328-18178366)
chr2 (363-401)||(25289211-25289249)
chr2 (363-401)||(26789841-26789879)
chr2 (363-401)||(28845634-28845672)
chr2 (363-402)||(3464642-3464681)
chr2 (363-398)||(20156344-20156379)
chr2 (220-255)||(38978592-38978627)
chr2 (363-401)||(30239161-30239199)
chr2 (363-401)||(33136653-33136691)
chr2 (93-134)||(8485531-8485572)
chr2 (88-140)||(20917027-20917079)
chr2 (365-401)||(43079540-43079576)
chr2 (220-251)||(3935591-3935622)
chr2 (367-401)||(2374033-2374067)
chr2 (171-204)||(8485607-8485640)
chr2 (364-401)||(13832669-13832706)
chr2 (363-391)||(1188676-1188704)
chr2 (369-401)||(3576811-3576843)
chr2 (369-401)||(7027961-7027993)
[»] scaffold1160 (2 HSPs)
scaffold1160 (21-222)||(2382-2577)
scaffold1160 (220-255)||(2324-2359)
[»] scaffold0393 (1 HSPs)
scaffold0393 (21-219)||(11172-11367)
[»] chr5 (24 HSPs)
chr5 (21-222)||(3174068-3174280)
chr5 (21-222)||(32863552-32863760)
chr5 (21-222)||(10572607-10572819)
chr5 (21-147)||(19209115-19209241)
chr5 (21-147)||(23737872-23737998)
chr5 (21-123)||(43300188-43300290)
chr5 (25-138)||(41958605-41958717)
chr5 (93-219)||(18739449-18739581)
chr5 (22-117)||(22273148-22273243)
chr5 (25-68)||(18739410-18739453)
chr5 (363-401)||(4239580-4239618)
chr5 (363-401)||(13717151-13717189)
chr5 (363-401)||(13926989-13927027)
chr5 (363-401)||(13999214-13999252)
chr5 (363-401)||(40012817-40012855)
chr5 (363-401)||(4549364-4549402)
chr5 (363-401)||(39853408-39853446)
chr5 (365-401)||(5950470-5950506)
chr5 (363-399)||(7947134-7947170)
chr5 (363-399)||(28593000-28593036)
chr5 (537-619)||(5527370-5527452)
chr5 (363-401)||(37014913-37014951)
chr5 (368-401)||(1459300-1459333)
chr5 (367-399)||(17519567-17519599)
[»] chr7 (37 HSPs)
chr7 (21-222)||(6472247-6472459)
chr7 (21-222)||(9371711-9371923)
chr7 (21-147)||(21358025-21358155)
chr7 (22-222)||(35012978-35013190)
chr7 (21-138)||(44660309-44660425)
chr7 (30-117)||(31419280-31419367)
chr7 (363-401)||(3023980-3024018)
chr7 (363-401)||(21068414-21068452)
chr7 (363-401)||(23102347-23102385)
chr7 (363-401)||(29894013-29894051)
chr7 (363-401)||(39785154-39785192)
chr7 (365-401)||(29613906-29613942)
chr7 (366-401)||(37971509-37971544)
chr7 (363-401)||(510704-510742)
chr7 (363-401)||(9881401-9881439)
chr7 (81-140)||(12003038-12003099)
chr7 (363-401)||(18839350-18839388)
chr7 (363-401)||(28034232-28034270)
chr7 (363-401)||(28343366-28343404)
chr7 (363-401)||(30823643-30823681)
chr7 (363-401)||(37328883-37328921)
chr7 (363-401)||(39029109-39029147)
chr7 (363-401)||(40459833-40459871)
chr7 (366-400)||(46035452-46035486)
chr7 (363-401)||(48136362-48136400)
chr7 (364-401)||(12741430-12741467)
chr7 (364-401)||(46405302-46405339)
chr7 (363-395)||(33891384-33891416)
chr7 (363-398)||(3635187-3635222)
chr7 (366-401)||(32884815-32884850)
chr7 (367-401)||(7994212-7994246)
chr7 (363-397)||(12893108-12893142)
chr7 (363-393)||(26183121-26183151)
chr7 (363-393)||(33383668-33383698)
chr7 (363-401)||(47067746-47067784)
chr7 (363-391)||(47879770-47879798)
chr7 (363-391)||(47914848-47914876)
[»] chr1 (34 HSPs)
chr1 (21-222)||(29599254-29599466)
chr1 (21-222)||(324583-324795)
chr1 (20-140)||(17480989-17481109)
chr1 (21-219)||(26354912-26355122)
chr1 (21-147)||(48184225-48184349)
chr1 (25-100)||(26014504-26014579)
chr1 (28-222)||(6165049-6165245)
chr1 (28-112)||(16764537-16764621)
chr1 (28-110)||(10801568-10801650)
chr1 (170-222)||(16764681-16764733)
chr1 (168-222)||(10801711-10801765)
chr1 (165-222)||(26014430-26014487)
chr1 (363-401)||(6313632-6313670)
chr1 (363-401)||(25613148-25613186)
chr1 (363-401)||(28386558-28386596)
chr1 (363-401)||(29395538-29395576)
chr1 (363-401)||(46329024-46329062)
chr1 (363-401)||(48176646-48176684)
chr1 (165-222)||(48184143-48184200)
chr1 (363-399)||(15835374-15835410)
chr1 (363-398)||(1923096-1923131)
chr1 (363-401)||(25830360-25830398)
chr1 (363-401)||(49232040-49232078)
chr1 (363-401)||(51702650-51702688)
chr1 (363-400)||(48199004-48199041)
chr1 (363-400)||(48207587-48207624)
chr1 (365-401)||(45273617-45273653)
chr1 (363-398)||(49197761-49197796)
chr1 (363-401)||(9321619-9321657)
chr1 (363-393)||(18799413-18799443)
chr1 (363-401)||(20111682-20111720)
chr1 (367-401)||(38535261-38535295)
chr1 (367-401)||(38557479-38557513)
chr1 (363-391)||(47781325-47781353)
[»] chr6 (17 HSPs)
chr6 (21-147)||(32397218-32397349)
chr6 (46-147)||(9302995-9303095)
chr6 (22-117)||(7171047-7171142)
chr6 (81-140)||(14654645-14654704)
chr6 (165-222)||(32397136-32397193)
chr6 (363-401)||(7498156-7498194)
chr6 (363-401)||(30384172-30384210)
chr6 (363-401)||(31068476-31068514)
chr6 (363-401)||(31896693-31896731)
chr6 (174-222)||(16497344-16497392)
chr6 (363-401)||(4199587-4199625)
chr6 (81-140)||(32397747-32397808)
chr6 (363-400)||(7104581-7104618)
chr6 (363-400)||(8790012-8790049)
chr6 (168-200)||(9302935-9302967)
chr6 (363-398)||(23929374-23929409)
chr6 (364-401)||(14261552-14261589)
[»] scaffold1084 (1 HSPs)
scaffold1084 (25-132)||(1208-1319)
[»] scaffold0054 (2 HSPs)
scaffold0054 (28-222)||(2776-2972)
scaffold0054 (364-401)||(36401-36438)
[»] scaffold1300 (1 HSPs)
scaffold1300 (21-154)||(925-1067)
[»] scaffold0285 (2 HSPs)
scaffold0285 (28-112)||(8383-8467)
scaffold0285 (171-222)||(8528-8579)
[»] scaffold0005 (1 HSPs)
scaffold0005 (21-117)||(39631-39727)
[»] scaffold0940 (1 HSPs)
scaffold0940 (363-401)||(3574-3612)
[»] scaffold0492 (1 HSPs)
scaffold0492 (363-399)||(12094-12130)
[»] scaffold0042 (1 HSPs)
scaffold0042 (363-401)||(57170-57208)
[»] scaffold0110 (1 HSPs)
scaffold0110 (363-396)||(38750-38783)
[»] scaffold0287 (1 HSPs)
scaffold0287 (363-398)||(10863-10898)
[»] scaffold1521 (1 HSPs)
scaffold1521 (363-401)||(1292-1330)
[»] scaffold0383 (1 HSPs)
scaffold0383 (363-401)||(16147-16185)
[»] scaffold0152 (1 HSPs)
scaffold0152 (363-401)||(29389-29427)
[»] scaffold0839 (1 HSPs)
scaffold0839 (364-401)||(3114-3151)
[»] scaffold0095 (1 HSPs)
scaffold0095 (365-401)||(21829-21865)


Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 21 - 255
Target Start/End: Original strand, 13740255 - 13740488
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13740255 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 13740354  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  |||| |    
T  13740355 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcacttgctttggt-t 13740453  T
Q  221 gggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    |||||||||||||||||||||||||||||||||||    
T  13740454 gggagaagaaaaggatcgcgtttctcacttgttct 13740488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 21 - 268
Target Start/End: Complemental strand, 21355983 - 21355727
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21355983 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacgttaccttacaagttacaacaattagggtttgtggagagag 21355884  T
Q  121 atggagatagctctctaaactgaagaaggaggagag---------taatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccgg 211  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21355883 atggagatagctctctaaactgaagaaggaggagagtaatgaaagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcacccg 21355784  T
Q  212 cggtggtgtgggagaagaaaaggatcgcgtttctcacttgttctacagcagcctaaa 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21355783 cggtggtgtgggagaagaaaaggatcgcgtttctcacttgttctacagcagcctaaa 21355727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 23218223 - 23218421
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23218223 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 23218322  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23218323 atggagataactctctaaactgaagaaggaggagagtaatcgcggcggcagtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 23218421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 45144088 - 45143890
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45144088 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 45143989  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45143988 atggagatagctttctaaactgaaggaggaggagagtaatcgcggaggcggtgatggatggagaaggaggagagtgatcgcggctcaccggcggtggtg 45143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 45152857 - 45152659
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45152857 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 45152758  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  45152757 atggagatagctttctaaactgaaggaggaggagagtaatcgcggaggcggtgatggatggagaaggaggagagtgatcgcggctcaccggcggtggtg 45152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 54785192 - 54785403
Alignment:
Q  22 aagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga-- 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  54785192 aagaacatgtaatcatcaaatcagaatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagaga 54785291  T
Q  120 --gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccg 210  Q
      |||||||| ||||| ||||||| |||||  |  | || | |||| |      |||||||||||||||||||||||||||||||||| ||||||| |||    
T  54785292 tggatggagacagctccctaaactaaagaatcaatacagaagatcgaggaggatgcggcggtgatggatggagaaggaggagagtggttgcggctcgccg 54785391  T
Q  211 gcggtggtgtgg 222  Q
    ||||||||||||    
T  54785392 gcggtggtgtgg 54785403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 47826024 - 47825813
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47826024 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 47825925  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg-----gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccg 210  Q
    |    |||||||||||||||||||| |||||  |  | || | || | |     ||||||||||||||||||||||||| |||||||||||||||| |||    
T  47825924 atggatggagatagctctctaaactaaagaatcaatacagaagattgagggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgccg 47825825  T
Q  211 gcggtggtgtgg 222  Q
    || |||||||||    
T  47825824 gcagtggtgtgg 47825813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 21604542 - 21604330
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21604542 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 21604443  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
    |    |||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  21604442 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 21604343  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  21604342 ggcagtggtgtgg 21604330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 46164369 - 46164581
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  46164369 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 46164468  T
Q  120 ---gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       |||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  46164469 atggatggagatagctctctaaactaaagaatcaatatagaagatagaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 46164568  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  46164569 ggcagtggtgtgg 46164581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 8432983 - 8433195
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  8432983 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaataacattcaatttcacattaccttacaagtaacaacaattagggtttgtggagagag 8433082  T
Q  120 ---gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       ||||||||||||| |||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  8433083 atggatggagatagctttctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 8433182  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  8433183 ggcagtggtgtgg 8433195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 535 - 635
Target Start/End: Complemental strand, 21348520 - 21348420
Alignment:
Q  535 tcaaattgtaaaataaaaaatggagtatgcgaaaaactaattctcagaagggtggaggtatttttgacggcggtggcgaactgaaaggggtgaattaaag 634  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  21348520 tcaaattgtaaaataaaaaatggagtatgcgaaaaactaattctcagaacggtggaggtatttttgacggcggtgacgaactgaaagggatggattaaag 21348421  T
Q  635 g 635  Q
    |    
T  21348420 g 21348420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 200
Target Start/End: Original strand, 33753972 - 33754142
Alignment:
Q  27 catgtaatcatcaaatcataatcataattgaaggaaattacattcaat--ttcacatt-accttacaagttacaacaattagggtttgtggagagagatg 123  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||  ||||  || || ||||   ||||||||||||||||||||||| |||||||    
T  33753972 catgtaatcatcaaatcaaaatcataattgaagaaaattacattcaatatttcaatttcacattac---ttacaacaattagggtttgtggaaagagatg 33754068  T
Q  124 gagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcg 200  Q
    |||||| ||||| |||||||||||||| |||||||||     || |||||||||||||||||| ||| |||||||||    
T  33754069 gagataactctcaaaactgaagaaggatgagagtaat---tacgtcggtgatggatggagaagtaggtgagtggtcg 33754142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 38115557 - 38115443
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataatt----gaaggaaattacattcaatttcacattaccttacaagttacaacaattagggt---ttgtggaga 117  Q
    ||||||||||||||| |||| ||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||    
T  38115557 aacatgtaatcatcatatcagaatcataattaattgaaggaaattacattcaatttcacattaccttacaaattacaacaattagggtttgttgtggaga 38115458  T
Q  118 gagatggagatagct 132  Q
    |||||| ||||||||    
T  38115457 gagatgaagatagct 38115443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 14800000 - 14800096
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||| |||||||||| |  ||||||||| |||||||||| |||||| ||||||| ||||||||  || |||||| ||||||||||||||||||    
T  14800000 aaagaacacgtaatcatcagagaataatcatatttgaaggaaaatacatttaatttcatattaccttgaaatttacaaaaattagggtttgtggaga 14800096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 5442485 - 5442447
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5442485 ggggtgtattggattaggattttaaaagactattttaat 5442447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 23988291 - 23988253
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23988291 ggggtgtattggattaggattttaaaagactattttaat 23988253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 27769158 - 27769120
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27769158 ggggtgtattggattaggattttaaaagactattttaat 27769120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 32683135 - 32683173
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32683135 ggggtgtattggattaggattttaaaagactattttaat 32683173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 48262169 - 48262131
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48262169 ggggtgtattggattaggattttaaaagactattttaat 48262131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 401
Target Start/End: Complemental strand, 32323163 - 32323126
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32323163 gggtgtattggattaggattttaaaagactattttaat 32323126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 23218439 - 23218474
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  23218439 tgggagaagaaaaggatcgcgtttctcacttgttct 23218474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 45143872 - 45143837
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  45143872 tgggagaagaaaaggatcgcgtttctcacttgttct 45143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 45152641 - 45152606
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  45152641 tgggagaagaaaaggatcgcgtttctcacttgttct 45152606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 37916902 - 37916864
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  37916902 ggggtgtattggattaggattttaagagactattttaat 37916864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 50019285 - 50019247
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  50019285 ggggtgtattggattagaattttaaaagactattttaat 50019247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 51321961 - 51321923
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  51321961 ggggtgtattggattaggattttaaaatactattttaat 51321923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 54342241 - 54342203
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  54342241 ggggtgtattggattagaattttaaaagactattttaat 54342203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 29649131 - 29649168
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  29649131 gggtgaattggattaggattttaaaagactattttaat 29649168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 38234697 - 38234660
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaa 400  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  38234697 ggggtgtattggattaggattttaaaagacttttttaa 38234660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 49833973 - 49834010
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    |||| |||||||||||||||||||||||||||||||||    
T  49833973 gggtatattggattaggattttaaaagactattttaat 49834010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 37827533 - 37827569
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37827533 ggtgtattggattagaattttaaaagactattttaat 37827569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 41726198 - 41726162
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||| ||||||||||||||||||||||    
T  41726198 ggtgtattggattatgattttaaaagactattttaat 41726162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 5105036 - 5105001
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||||||||||||||||| |||||    
T  5105036 ggggtgtattggattaggattttaaaagacaatttt 5105001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 540
Target Start/End: Complemental strand, 21355564 - 21355529
Alignment:
Q  505 tttatttttataaatagttaatcaacttcatcaaat 540  Q
    |||||||||||||||||||||| |||||||||||||    
T  21355564 tttatttttataaatagttaatgaacttcatcaaat 21355529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 48531925 - 48531959
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    |||||| ||||||||||||||||||||||||||||    
T  48531925 tgtatttgattaggattttaaaagactattttaat 48531959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 49500640 - 49500678
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  49500640 ggggtgtattggattagaattttgaaagactattttaat 49500678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 54852661 - 54852691
Alignment:
Q  363 ggggtgtattggattaggattttaaaagact 393  Q
    |||||||||||||||||||||||||||||||    
T  54852661 ggggtgtattggattaggattttaaaagact 54852691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 3187589 - 3187646
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttca 78  Q
    |||||||||||||||||||||  | ||||| | || ||||||| ||||||||||||||    
T  3187589 aaagaacatgtaatcatcaaagaagaatcagatttaaaggaaaatacattcaatttca 3187646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 392
Target Start/End: Complemental strand, 16019942 - 16019913
Alignment:
Q  363 ggggtgtattggattaggattttaaaagac 392  Q
    ||||||||||||||||||||||||||||||    
T  16019942 ggggtgtattggattaggattttaaaagac 16019913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 37369432 - 37369468
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttta 399  Q
    ||||||||||||||||||||||||||| || ||||||    
T  37369432 ggggtgtattggattaggattttaaaaaacaatttta 37369468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 1668221 - 1668023
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1668221 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 1668122  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1668121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 1668023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 16658936 - 16658738
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16658936 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 16658837  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16658836 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 16658738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 38521229 - 38521424
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38521229 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 38521328  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    ||||||||| |||||||||||   ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38521329 atggagataactctctaaact---gaaggaggagagtaatcgcggcggcagtgatggatggagaaggagaagagtggtcgcggctcaccggcggtggtg 38521424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 6786550 - 6786356
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataattgaaggaaattacattcaa-tttcacattaccttacaagttacaacaattagggtttgtggagagagatg 123  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6786550 aacatgtaatcatcaaatcaaaatcagaattgaaggaagttacattcaaatttcacattaccttacaagttacagcaattagggtttgtggagagagatg 6786451  T
Q  124 gagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggt 218  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  6786450 gagatagctttcaaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggttcgacggcggtggt 6786356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 22432294 - 22432506
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22432294 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 22432393  T
Q  120 ---gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       |||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  22432394 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 22432493  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  22432494 ggcagtggtgtgg 22432506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 29182578 - 29182790
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29182578 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 29182677  T
Q  120 ---gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       |||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  29182678 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 29182777  T
Q  210 ggcggtggtgtgg 222  Q
     || |||||||||    
T  29182778 agcagtggtgtgg 29182790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 27576885 - 27576667
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataat------tgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtgg 114  Q
    |||||||||||||||||||||||| ||||| |||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27576885 aaagaacatgtaatcatcaaatcagaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtgg 27576786  T
Q  115 agagaga----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcgg 203  Q
    |||||||    |||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||    
T  27576785 agagagatggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcgg 27576686  T
Q  204 ctcaccggcggtggtgtgg 222  Q
    ||| ||||| |||||||||    
T  27576685 ctcgccggcagtggtgtgg 27576667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 774683 - 774896
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaa-tttcacattaccttacaagttacaacaattagggtttgtggaga-- 117  Q
    |||||||||||||| |||| |||| ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||      
T  774683 aaagaacatgtaattatcatatcagaatcagaattgaaggaaattacattcaaatttcacattaccttataagttacaacaattagggtttgtggagaag 774782  T
Q  118 ga--gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcac 208  Q
    ||  |||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||||||||||||||||| || |    
T  774783 gatggatggagatagctctctaaactaaagaatcaatacagaagatggaggaggatgcggcggtgatggatggagaaggaggagagtggtcgcggttcgc 774882  T
Q  209 cggcggtggtgtgg 222  Q
    ||||||||||||||    
T  774883 cggcggtggtgtgg 774896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 22014951 - 22014860
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgt 112  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22014951 aaagaatatgtaatcatcaaacaataatcataattgaaggaaattacattcaatttcacattaacttacaagttacaacaattagggtttgt 22014860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 11472358 - 11472476
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataat----tgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtt---tgtg 113  Q
    ||||||||||||||||||| |||| |||||||||    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||    
T  11472358 aaagaacatgtaatcatcatatcagaatcataattaattgaaggaaattacattcaatttcacattaccttacaaattacaacaattagggttttctgtg 11472457  T
Q  114 gagagagatggagatagct 132  Q
    |||||||||| ||||||||    
T  11472458 gagagagatgaagatagct 11472476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 43916184 - 43916091
Alignment:
Q  54 ttgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagagatggagatagctctctaaactgaagaa 147  Q
    ||||||||||||||||| || |||||||| |||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  43916184 ttgaaggaaattacattaaaattcacatttccttacaatttacaacaatcagggtttatggagagagatggagatagctctctaaactgaagaa 43916091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 42808783 - 42808687
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    ||||||||||||||||||| |  ||||||||| |||||||||| |||||||||||||| |||||||| ||| |||||| ||||||||||||||||||    
T  42808783 aaagaacatgtaatcatcagagaataatcatatttgaaggaaaatacattcaatttcatattaccttgcaatttacaagaattagggtttgtggaga 42808687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 22014802 - 22014748
Alignment:
Q  168 gcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22014802 gcggtgatggatggagaaggaggagagtggtcgcggctcaccagcggtggtgtgg 22014748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 780493 - 780550
Alignment:
Q  165 gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  780493 gcggcggtgatggatggagaaggaggagagtggtcgcggttcgccggcggtggtgtgg 780550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 33360489 - 33360397
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    ||||||||||||||| |  ||||||||| |||||||||| |||||||||||||| |||| ||| ||| |||| | ||||||||||||||||||    
T  33360489 aacatgtaatcatcagagaataatcatatttgaaggaaaatacattcaatttcatattaacttgcaatttaccagaattagggtttgtggaga 33360397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 18068536 - 18068479
Alignment:
Q  165 gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  18068536 gcggcggtgatggatggagaaggagaagagtggtcgcggctcgccggcagtggtgtgg 18068479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 780365 - 780417
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaa 73  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  780365 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaa 780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 34212961 - 34213020
Alignment:
Q  81 ttaccttacaagttacaacaattagggtttgtggagagagatggagatagctctctaaac 140  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||| |||||    
T  34212961 ttaccttacaatttacaagaactagggtttgtggagagagatggagatagctctttaaac 34213020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 14781248 - 14781286
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14781248 ggggtgtattggattaggattttaaaagactattttaat 14781286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 18957834 - 18957872
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18957834 ggggtgtattggattaggattttaaaagactattttaat 18957872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 32498985 - 32498947
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32498985 ggggtgtattggattaggattttaaaagactattttaat 32498947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 34893452 - 34893414
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34893452 ggggtgtattggattaggattttaaaagactattttaat 34893414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 37857971 - 37857933
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  37857971 ggggtgtattggattaggattttaaaagactattttaat 37857933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 44724898 - 44724935
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44724898 gggtgtattggattaggattttaaaagactattttaat 44724935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 9287608 - 9287644
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||    
T  9287608 ggtgtattggattaggattttaaaagactattttaat 9287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 38521442 - 38521477
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  38521442 tgggagaagaaaaggatcgcgtttctcacttgttct 38521477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 4030443 - 4030481
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4030443 ggggtgtattagattaggattttaaaagactattttaat 4030481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 18305077 - 18305115
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  18305077 ggggtgtattggattaggattttaaaagacaattttaat 18305115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 19716983 - 19717017
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||    
T  19716983 tgtattggattaggattttaaaagactattttaat 19717017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 42304745 - 42304779
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||    
T  42304745 tgtattggattaggattttaaaagactattttaat 42304779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 251
Target Start/End: Complemental strand, 16658720 - 16658689
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttg 251  Q
    ||||||||||||||||||||||||||||||||    
T  16658720 tgggagaagaaaaggatcgcgtttctcacttg 16658689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 10294516 - 10294550
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||| |||||||||||    
T  10294516 tgtattggattaggattttaaaacactattttaat 10294550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 16365371 - 16365333
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  16365371 ggggtgtattgaattaggattttaaaagacaattttaat 16365333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 20831080 - 20831114
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattt 397  Q
    ||||||||||| |||||||||||||||||||||||    
T  20831080 ggggtgtattgaattaggattttaaaagactattt 20831114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 39466634 - 39466672
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  39466634 ggggtgtattggattaagattttaaaagattattttaat 39466672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 31626392 - 31626356
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||| |||||||||||||||||||| |||||||||||    
T  31626392 ggtgcattggattaggattttaaaacactattttaat 31626356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 52893547 - 52893349
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52893547 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 52893448  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52893447 atggagatagctttctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtgatcgcggctcaccggcggtggtg 52893349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 2338819 - 2339015
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2338819 aaagaacatgtaata--caaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 2338916  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2338917 atggagataactctctaaactgaagaaggaggagagtaatcgcggcggcagtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 2339015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 21 - 166
Target Start/End: Complemental strand, 21239551 - 21239406
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21239551 aaagaacatgtaatcatcaaatcataatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 21239452  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggc 166  Q
    | |||||||||| ||||||||||||||| |||||||| ||||||||    
T  21239451 acggagatagctttctaaactgaagaagaaggagagtgatcgcggc 21239406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 9456530 - 9456318
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9456530 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattacctttcaagttacaacaattagggtttgtggagagag 9456431  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
    |    ||||||||||| |||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| ||||||||||| |||| ||    
T  9456430 atggatggagatagctgtctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcagctcgcc 9456331  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  9456330 ggcagtggtgtgg 9456318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 535 - 635
Target Start/End: Original strand, 50724024 - 50724124
Alignment:
Q  535 tcaaattgtaaaataaaaaatggagtatgcgaaaaactaattctcagaagggtggaggtatttttgacggcggtggcgaactgaaaggggtgaattaaag 634  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||| |||||||    
T  50724024 tcaaatcgtaaaacaaaaaatggagtatgcgaaaaactaattctcagaacggtgaagttatttttgacggcggtggcgaactgaaaggggtggattaaag 50724123  T
Q  635 g 635  Q
    |    
T  50724124 g 50724124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 535 - 635
Target Start/End: Complemental strand, 50788825 - 50788725
Alignment:
Q  535 tcaaattgtaaaataaaaaatggagtatgcgaaaaactaattctcagaagggtggaggtatttttgacggcggtggcgaactgaaaggggtgaattaaag 634  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||| |||||||    
T  50788825 tcaaatcgtaaaacaaaaaatggagtatgcgaaaaactaattctcagaacggtgaagttatttttgacggcggtggcgaactgaaaggggtggattaaag 50788726  T
Q  635 g 635  Q
    |    
T  50788725 g 50788725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 40923071 - 40922976
Alignment:
Q  22 aagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||||||||||||| |  ||||||||| |||||||||| |||||||||||||  |||||||| ||| |||||| ||||||||||||||||||    
T  40923071 aagaacatgtaatcatcagagaataatcatatttgaaggaaaatacattcaatttcttattaccttgcaatttacaagaattagggtttgtggaga 40922976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 2733888 - 2733793
Alignment:
Q  22 aagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||||||||||||| |  ||||||||| |||||||||| || ||||||||||  |||||||| ||| |||||| ||||||||||||||||||    
T  2733888 aagaacatgtaatcatcagagaataatcatatttgaaggaaaatagattcaatttcttattaccttgcaatttacaagaattagggtttgtggaga 2733793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 10728125 - 10728163
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10728125 ggggtgtattggattaggattttaaaagactattttaat 10728163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 11432641 - 11432603
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11432641 ggggtgtattggattaggattttaaaagactattttaat 11432603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 17947314 - 17947276
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17947314 ggggtgtattggattaggattttaaaagactattttaat 17947276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 27239327 - 27239365
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27239327 ggggtgtattggattaggattttaaaagactattttaat 27239365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 36673260 - 36673298
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36673260 ggggtgtattggattaggattttaaaagactattttaat 36673298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 20833990 - 20833954
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||    
T  20833990 ggtgtattggattaggattttaaaagactattttaat 20833954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 37455928 - 37455892
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||    
T  37455928 ggtgtattggattaggattttaaaagactattttaat 37455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 2339033 - 2339068
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  2339033 tgggagaagaaaaggatcgcgtttctcacttgttct 2339068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 21239373 - 21239338
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  21239373 tgggagaagaaaaggatcgcgtttctcacttgttct 21239338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 401
Target Start/End: Complemental strand, 54629948 - 54629909
Alignment:
Q  362 cggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  54629948 cggggtgtattggattaggattttaaaagacaattttaat 54629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 401
Target Start/End: Complemental strand, 10661278 - 10661244
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||    
T  10661278 tgtattggattaggattttaaaagactattttaat 10661244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 18750729 - 18750691
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  18750729 ggggtgtattgaattaggattttaaaagactattttaat 18750691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 45254555 - 45254593
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  45254555 ggggtgtattagattaggattttaaaagactattttaat 45254593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 50761222 - 50761260
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  50761222 ggggtgtattggattaggatattaaaagactattttaat 50761260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 50902418 - 50902456
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  50902418 ggggtgtattggattaagattttaaaagactattttaat 50902456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 52617087 - 52617125
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  52617087 ggggtgtattggattaggattttaaaagacaattttaat 52617125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 401
Target Start/End: Complemental strand, 48380243 - 48380206
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||| |||||||||||||||||||||    
T  48380243 gggtgtattggattagaattttaaaagactattttaat 48380206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 7319174 - 7319139
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||||||||||||||||| |||||    
T  7319174 ggggtgtattggattaggattttaaaagacaatttt 7319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 24149837 - 24149872
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||| |||||||||||||||||||    
T  24149837 ggggtgtattggattaagattttaaaagactatttt 24149872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Original strand, 51736870 - 51736905
Alignment:
Q  366 gtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||| |||||||||||    
T  51736870 gtgtattggattaggattttaaaatactattttaat 51736905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 4329855 - 4329916
Alignment:
Q  81 ttaccttacaagttacaacaattagggtttgtg--gagagagatggagatagctctctaaac 140  Q
    ||||||||||| |||| | || |||||||||||  ||||||||||||||||||||| |||||    
T  4329855 ttaccttacaatttactagaactagggtttgtggagagagagatggagatagctctttaaac 4329916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 31645364 - 31645402
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  31645364 ggggtgtattggattaagattttaaaagacaattttaat 31645402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 39841555 - 39841593
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  39841555 ggggtgtattgaattatgattttaaaagactattttaat 39841593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 40898162 - 40898124
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  40898162 ggggtgtattcgattagaattttaaaagactattttaat 40898124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 44904961 - 44904995
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||| ||||||||||||||||||||||    
T  44904961 tgtattggattaagattttaaaagactattttaat 44904995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 21239428 - 21239391
Alignment:
Q  182 agaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  21239428 agaagaaggagagtgatcgcggctcaccggcggtggtg 21239391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 23752504 - 23752541
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||  |||||||||||||||||||||||||||    
T  23752504 gggtgtatttaattaggattttaaaagactattttaat 23752541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 34483199 - 34483236
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaa 400  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  34483199 ggggtgtattgaattaggattttacaagactattttaa 34483236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 26108524 - 26108496
Alignment:
Q  363 ggggtgtattggattaggattttaaaaga 391  Q
    |||||||||||||||||||||||||||||    
T  26108524 ggggtgtattggattaggattttaaaaga 26108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 3935375 - 3935573
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3935375 aaagaacatgtaatcatcaaattataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 3935474  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3935475 atggagatagctctctaaactgaagaagtaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 3935573  T

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Target: chr2; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 38978382 - 38978570
Alignment:
Q  27 catgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagagatggag 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38978382 catgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacactaccttacaagttacaacaattagggtttgtggagagagatggag 38978481  T
Q  127 atagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggt 215  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  38978482 atagctttctaaactgaagaaggaggagagtaattgcggcggcggtgatggatggagaaggaggagagtgatcgcggctcaccggcggt 38978570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 25697570 - 25697782
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  25697570 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagtaacaacaattagggtttgtggagagag 25697669  T
Q  120 ---gatggagatagctctctaaactgaagaa-----ggaggagagtaatcgcg--gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       |||||||||||||||||||||| |||||       || ||| | |  | |  ||||||||||||||||||||||||| |||||||||||||||| ||    
T  25697670 atggatggagatagctctctaaactaaagaatctatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 25697769  T
Q  210 ggcggtggtgtgg 222  Q
     || |||||||||    
T  25697770 agcagtggtgtgg 25697782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 32339652 - 32339602
Alignment:
Q  27 catgtaatcatcaaatcataatcataattgaaggaaattacattcaatttc 77  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  32339652 catgtaatcatcaaatcagaatcataattgaagaaaattacattcaatttc 32339602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 214625 - 214663
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  214625 ggggtgtattggattaggattttaaaagactattttaat 214663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 380004 - 379966
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  380004 ggggtgtattggattaggattttaaaagactattttaat 379966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 10658524 - 10658486
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10658524 ggggtgtattggattaggattttaaaagactattttaat 10658486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 18178366 - 18178328
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18178366 ggggtgtattggattaggattttaaaagactattttaat 18178328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 25289249 - 25289211
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25289249 ggggtgtattggattaggattttaaaagactattttaat 25289211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 26789879 - 26789841
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26789879 ggggtgtattggattaggattttaaaagactattttaat 26789841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 28845672 - 28845634
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28845672 ggggtgtattggattaggattttaaaagactattttaat 28845634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 363 - 402
Target Start/End: Complemental strand, 3464681 - 3464642
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaatt 402  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  3464681 ggggtgtattggattaggattttacaagactattttaatt 3464642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 20156344 - 20156379
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    ||||||||||||||||||||||||||||||||||||    
T  20156344 ggggtgtattggattaggattttaaaagactatttt 20156379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Original strand, 38978592 - 38978627
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  38978592 tgggagaagaaaaggatcgcgtttctcacttgttct 38978627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 30239161 - 30239199
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  30239161 ggggtgtattggattatgattttaaaagactattttaat 30239199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 33136691 - 33136653
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  33136691 ggggtgtattggattaggattttaaaagacaattttaat 33136653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 8485531 - 8485572
Alignment:
Q  93 ttacaacaattagggtttgtggagagagatggagatagctct 134  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  8485531 ttacaagaattagggtttgtggagagagatagagatagctct 8485572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 20917079 - 20917027
Alignment:
Q  88 acaagttacaacaattagggtttgtggagagagatggagatagctctctaaac 140  Q
    |||| |||||| || || ||||||||||||||||||||||||||||| |||||    
T  20917079 acaatttacaagaactaaggtttgtggagagagatggagatagctctttaaac 20917027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 43079576 - 43079540
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||| |||||||||||||||||||||    
T  43079576 ggtgtattggattagaattttaaaagactattttaat 43079540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 251
Target Start/End: Original strand, 3935591 - 3935622
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttg 251  Q
    ||||||||||||||||||||||||||||||||    
T  3935591 tgggagaagaaaaggatcgcgtttctcacttg 3935622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Complemental strand, 2374067 - 2374033
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    ||||||| |||||||||||||||||||||||||||    
T  2374067 tgtattgtattaggattttaaaagactattttaat 2374033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 8485607 - 8485640
Alignment:
Q  171 gtgatggatggagaaggaggagagtggtcgcggc 204  Q
    |||||||||||||||||||| |||||||||||||    
T  8485607 gtgatggatggagaaggaggtgagtggtcgcggc 8485640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 13832669 - 13832706
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||  |||||||||||||||||||||||||||    
T  13832669 gggtgtattcaattaggattttaaaagactattttaat 13832706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Original strand, 1188676 - 1188704
Alignment:
Q  363 ggggtgtattggattaggattttaaaaga 391  Q
    |||||||||||||||||||||||||||||    
T  1188676 ggggtgtattggattaggattttaaaaga 1188704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 3576843 - 3576811
Alignment:
Q  369 tattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||| |||||||||    
T  3576843 tattggattaggattttaaaagattattttaat 3576811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 7027993 - 7027961
Alignment:
Q  369 tattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||| |||||||||    
T  7027993 tattggattaggattttaaaagattattttaat 7027961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 179; Significance: 3e-96; HSPs: 2)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 2577 - 2382
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2577 aaagaacatgtaatcatcaaatcataat------tgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 2484  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgt 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2483 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgt 2384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 255
Target Start/End: Complemental strand, 2359 - 2324
Alignment:
Q  220 tgggagaagaaaaggatcgcgtttctcacttgttct 255  Q
    ||||||||||||||||||||||||||||||||||||    
T  2359 tgggagaagaaaaggatcgcgtttctcacttgttct 2324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 173; Significance: 1e-92; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 21 - 219
Target Start/End: Original strand, 11172 - 11367
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11172 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattaggatttgtggagagag 11271  T
Q  121 atggagatagctctctaaactgaagaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtg 219  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  11272 atggagatagctctctaaact---gaaggaggagagtaatcgcggcggcggtgatggatggagaaggaggaaagtggtcgcggctcaccgtcggtggtg 11367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 3174280 - 3174068
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3174280 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 3174181  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
    |    |||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  3174180 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 3174081  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  3174080 ggcagtggtgtgg 3174068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 32863760 - 32863552
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  32863760 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagatgg 32863661  T
Q  121 atggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcg 213  Q
    ||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| |||||     
T  32863660 atggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgccggca 32863561  T
Q  214 gtggtgtgg 222  Q
    |||||||||    
T  32863560 gtggtgtgg 32863552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 10572819 - 10572607
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572819 aaagaacatgtaatcatcaaatcagaatcacaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 10572720  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
    |    |||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  10572719 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 10572620  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  10572619 ggcagtggtgtgg 10572607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 19209115 - 19209241
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||| ||| || ||||| | |||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||    
T  19209115 aaagaacatgtaatcattaaagcagaatcagatttgaaggaaattacattcaatttcacgttaccttacgatttacaacaattagggtttatggagagag 19209214  T
Q  121 atggagatagctctctaaactgaagaa 147  Q
    ||| |||||||||| ||||||||||||    
T  19209215 atgcagatagctctttaaactgaagaa 19209241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 23737998 - 23737872
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||| |||  | ||||| | |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||    
T  23737998 aaagaacatgtaatcattaaagaagaatcagatttgaaggaaattacattcaatttcatgttaccttacaatttacaacaattagggtttatggagagag 23737899  T
Q  121 atggagatagctctctaaactgaagaa 147  Q
    ||| |||||||||| ||||||||||||    
T  23737898 atgcagatagctctttaaactgaagaa 23737872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 43300290 - 43300188
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||| |||  | ||||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||    
T  43300290 aaagaacatgtaatcattaaagaaaaatcagaattgaacgaaattacattcaatttcacattaccttataatttacaacaattagggtttatggagagag 43300191  T
Q  121 atg 123  Q
    |||    
T  43300190 atg 43300188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 41958605 - 41958717
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagagatgg 124  Q
    ||||||||||||| |||  | ||||| ||||||| ||||||||||||||||||||||||||||  || | |||||||||||||||| ||||||||||| |    
T  41958605 aacatgtaatcattaaagaaaaatcagaattgaacgaaattacattcaatttcacattaccttgtaattaacaacaattagggtttatggagagagat-g 41958703  T
Q  125 agatagctctctaa 138  Q
    ||||| ||||||||    
T  41958704 agataactctctaa 41958717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 18739449 - 18739581
Alignment:
Q  93 ttacaacaattagggtttgtggagagagatggag----atagctctctaaactgaagaaggag---gagagtaatcgcggcggcggtgatggatggagaa 185  Q
    |||||| |||||||||||||||||||||||| ||    | ||||||||||| |||||||| ||   ||||||||||||||   |||||||||||||||||    
T  18739449 ttacaataattagggtttgtggagagagatgaaggaagaaagctctctaaattgaagaagaagaaggagagtaatcgcgg---cggtgatggatggagaa 18739545  T
Q  186 ggaggagagtgg--tcgcggctcaccggcggtggtg 219  Q
     |||||||||||  ||||||||||||||||||||||    
T  18739546 agaggagagtggtctcgcggctcaccggcggtggtg 18739581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Original strand, 22273148 - 22273243
Alignment:
Q  22 aagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||||||||||||| |  ||||||||| |||||||||| || ||||||||||  |||||||| ||| |||||| ||||||||||||||||||    
T  22273148 aagaacatgtaatcatcagagaataatcatatttgaaggaaaatagattcaatttcttattaccttgcaatttacaagaattagggtttgtggaga 22273243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 18739410 - 18739453
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataattgaaggaaattaca 68  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  18739410 aacatgtaatcatcaaatcagaatcataattgaaggaaattaca 18739453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 4239580 - 4239618
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4239580 ggggtgtattggattaggattttaaaagactattttaat 4239618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 13717189 - 13717151
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13717189 ggggtgtattggattaggattttaaaagactattttaat 13717151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 13927027 - 13926989
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13927027 ggggtgtattggattaggattttaaaagactattttaat 13926989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 13999214 - 13999252
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13999214 ggggtgtattggattaggattttaaaagactattttaat 13999252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 40012817 - 40012855
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40012817 ggggtgtattggattaggattttaaaagactattttaat 40012855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 4549364 - 4549402
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4549364 ggggtgtattcgattaggattttaaaagactattttaat 4549402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 39853446 - 39853408
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  39853446 ggggtgtattggattagaattttaaaagactattttaat 39853408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 5950506 - 5950470
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||| ||||||||||||||||||||||    
T  5950506 ggtgtattggattatgattttaaaagactattttaat 5950470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 7947134 - 7947170
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttta 399  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7947134 ggggtgtattgaattaggattttaaaagactatttta 7947170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 399
Target Start/End: Original strand, 28593000 - 28593036
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttta 399  Q
    |||||||||||||||||||||||||||||| ||||||    
T  28593000 ggggtgtattggattaggattttaaaagacaatttta 28593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 619
Target Start/End: Original strand, 5527370 - 5527452
Alignment:
Q  537 aaattgtaaaataaaaaatggagtatgcgaaaaactaattctcagaagggtggaggtatttttgacggcggtggcgaactgaa 619  Q
    |||| |||||| |||||||||| |   ||||||||| | |||||| | |||||||| || || ||||||||||||||||||||    
T  5527370 aaatcgtaaaacaaaaaatggatttctcgaaaaactgaatctcagtatggtggaggcatcttggacggcggtggcgaactgaa 5527452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 37014951 - 37014913
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  37014951 ggggtgtattggattagaattttaaaagattattttaat 37014913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 401
Target Start/End: Original strand, 1459300 - 1459333
Alignment:
Q  368 gtattggattaggattttaaaagactattttaat 401  Q
    |||||| |||||||||||||||||||||||||||    
T  1459300 gtattgaattaggattttaaaagactattttaat 1459333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 367 - 399
Target Start/End: Complemental strand, 17519599 - 17519567
Alignment:
Q  367 tgtattggattaggattttaaaagactatttta 399  Q
    |||||||||||| ||||||||||||||||||||    
T  17519599 tgtattggattaagattttaaaagactatttta 17519567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 2e-54; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 6472247 - 6472459
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6472247 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 6472346  T
Q  120 ---gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       |||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  6472347 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 6472446  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  6472447 ggcagtggtgtgg 6472459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 9371923 - 9371711
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9371923 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 9371824  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
    |    |||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  9371823 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 9371724  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  9371723 ggcagtggtgtgg 9371711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 21358025 - 21358155
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21358025 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 21358124  T
Q  120 ---gatggagatagctctctaaactgaagaa 147  Q
       |||||||||||||||||||||| |||||    
T  21358125 atggatggagatagctctctaaactaaagaa 21358155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 35012978 - 35013190
Alignment:
Q  22 aagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga-- 119  Q
    ||||||||||||| ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  35012978 aagaacatgtaattatcaaatcagaatcaggattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagaga 35013077  T
Q  120 --gatggagatagctctctaaactgaagaaggaggagagta-atcgcg-------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
      |||||||||||||||||||||| |||||  |  | || | || | |       ||||||||||||||||||||||||| |||||||||||||| | ||    
T  35013078 tggatggagatagctctctaaactaaagaatcaatacagaagattgagggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggcccgcc 35013177  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  35013178 ggcagtggtgtgg 35013190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 44660425 - 44660309
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||||| |||  | ||||| ||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||| |||||||||    
T  44660425 aaagaacatgtaatcattaaagaaaaatcagaattgaacgaaattacattcaatttcacattaccttataatttagaacaattagggtttatggagagag 44660326  T
Q  121 atggagatagctctctaa 138  Q
    || |||||| ||||||||    
T  44660325 at-gagataactctctaa 44660309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 31419367 - 31419280
Alignment:
Q  30 gtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||||| |  ||||||||| |||||||||| |||||||||||||  |||||||| ||| |||||| ||||||||||||||||||    
T  31419367 gtaatcatcagagaataatcatatttgaaggaaaatacattcaatttcttattaccttgcaatttacaagaattagggtttgtggaga 31419280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 3024018 - 3023980
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3024018 ggggtgtattggattaggattttaaaagactattttaat 3023980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 21068452 - 21068414
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21068452 ggggtgtattggattaggattttaaaagactattttaat 21068414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 23102385 - 23102347
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23102385 ggggtgtattggattaggattttaaaagactattttaat 23102347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 29894051 - 29894013
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29894051 ggggtgtattggattaggattttaaaagactattttaat 29894013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 39785192 - 39785154
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39785192 ggggtgtattggattaggattttaaaagactattttaat 39785154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 29613906 - 29613942
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||    
T  29613906 ggtgtattggattaggattttaaaagactattttaat 29613942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 401
Target Start/End: Original strand, 37971509 - 37971544
Alignment:
Q  366 gtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||||||||||    
T  37971509 gtgtattggattaggattttaaaagactattttaat 37971544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 510742 - 510704
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  510742 ggggtgtattggattgggattttaaaagactattttaat 510704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 9881401 - 9881439
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  9881401 ggggtgtattggattaggattttaaaagacaattttaat 9881439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 12003038 - 12003099
Alignment:
Q  81 ttaccttacaagttacaacaattagggtttgtgg--agagagatggagatagctctctaaac 140  Q
    ||||||||||| |||||| ||||||||| |||||  |||||||||||||||||||| |||||    
T  12003038 ttaccttacaatttacaagaattagggtgtgtggaaagagagatggagatagctctttaaac 12003099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 18839388 - 18839350
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  18839388 ggggtgtattggattaggattttaaaagattattttaat 18839350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 28034232 - 28034270
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  28034232 ggggtgtattgaattaggattttaaaagactattttaat 28034270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 28343404 - 28343366
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  28343404 ggggtgtattggattgggattttaaaagactattttaat 28343366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 30823681 - 30823643
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30823681 ggggtgtattgaattaggattttaaaagactattttaat 30823643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 37328921 - 37328883
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  37328921 ggggtgtattggattagaattttaaaagactattttaat 37328883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 39029147 - 39029109
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  39029147 ggggtgtattggattaggattttaaaagattattttaat 39029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 40459833 - 40459871
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  40459833 ggggtgtattggattagaattttaaaagactattttaat 40459871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 400
Target Start/End: Original strand, 46035452 - 46035486
Alignment:
Q  366 gtgtattggattaggattttaaaagactattttaa 400  Q
    |||||||||||||||||||||||||||||||||||    
T  46035452 gtgtattggattaggattttaaaagactattttaa 46035486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 48136362 - 48136400
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  48136362 ggggtatattggattaggattttaaaagactattttaat 48136400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 401
Target Start/End: Complemental strand, 12741467 - 12741430
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  12741467 gggtgtattggattaagattttaaaagactattttaat 12741430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 46405302 - 46405339
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  46405302 gggtgtattagattaggattttaaaagactattttaat 46405339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 363 - 395
Target Start/End: Original strand, 33891384 - 33891416
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactat 395  Q
    |||||||||||||||||||||||||||||||||    
T  33891384 ggggtgtattggattaggattttaaaagactat 33891416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 3635222 - 3635187
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||||||||||||||||| |||||    
T  3635222 ggggtgtattggattaggattttaaaagacaatttt 3635187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Complemental strand, 32884850 - 32884815
Alignment:
Q  366 gtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32884850 gtgtattggattaagattttaaaagactattttaat 32884815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Complemental strand, 7994246 - 7994212
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||| |||||||||    
T  7994246 tgtattggattaggattttaaaagagtattttaat 7994212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 397
Target Start/End: Original strand, 12893108 - 12893142
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattt 397  Q
    ||||||||||||||||||||||||||| |||||||    
T  12893108 ggggtgtattggattaggattttaaaatactattt 12893142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 26183151 - 26183121
Alignment:
Q  363 ggggtgtattggattaggattttaaaagact 393  Q
    |||||||||||||||||||||||||||||||    
T  26183151 ggggtgtattggattaggattttaaaagact 26183121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 33383698 - 33383668
Alignment:
Q  363 ggggtgtattggattaggattttaaaagact 393  Q
    |||||||||||||||||||||||||||||||    
T  33383698 ggggtgtattggattaggattttaaaagact 33383668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 47067784 - 47067746
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  47067784 ggggtgtattgaattagaattttaaaagactattttaat 47067746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 47879798 - 47879770
Alignment:
Q  363 ggggtgtattggattaggattttaaaaga 391  Q
    |||||||||||||||||||||||||||||    
T  47879798 ggggtgtattggattaggattttaaaaga 47879770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 47914876 - 47914848
Alignment:
Q  363 ggggtgtattggattaggattttaaaaga 391  Q
    |||||||||||||||||||||||||||||    
T  47914876 ggggtgtattggattaggattttaaaaga 47914848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 21 - 222
Target Start/End: Original strand, 29599254 - 29599466
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga- 119  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  29599254 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 29599353  T
Q  120 ---gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
       |||||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  29599354 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 29599453  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  29599454 ggcagtggtgtgg 29599466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 324795 - 324583
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  324795 aaagaacatctaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggcttgtggagagag 324696  T
Q  121 a----tggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcacc 209  Q
    |    |||||||||||||||||||| |||||  |  | || | || | |      ||||||||||||||||||||||||| |||||||||||||||| ||    
T  324695 atggatggagatagctctctaaactaaagaatcaatacagaagattgaggggggtgcggcggtgatggatggagaaggagaagagtggtcgcggctcgcc 324596  T
Q  210 ggcggtggtgtgg 222  Q
    ||| |||||||||    
T  324595 ggcagtggtgtgg 324583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 17480989 - 17481109
Alignment:
Q  20 caaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagaga 119  Q
    ||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  17480989 caaagaacatgtaatcatcaaagaataatcatatttgaaggaaaatacattcaatttcacattaccttacaatttacaagaattaggatttgtggagaga 17481088  T
Q  120 gatggagatagctctctaaac 140  Q
    ||||||||||||||| |||||    
T  17481089 gatggagatagctctttaaac 17481109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 26355122 - 26354912
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaa-tttcacattaccttacaagttacaacaattagggtttgtggaga-- 117  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||      
T  26355122 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaagttacattcaaatttcacattaccttacaagttacaacaattagggtttgtggagaag 26355023  T
Q  118 ga--gatggagatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcac 208  Q
    ||  ||||||||||||||||| ||||  ||||  |  | || | || | |      ||||||||||||||||||||||||||||||||||||||| || |    
T  26355022 gatggatggagatagctctctgaactatagaatcaatacagaagatggaggaggatgcggcggtgatggatggagaaggaggagagtggtcgcggttcgc 26354923  T
Q  209 cggcggtggtg 219  Q
    |||||||||||    
T  26354922 cggcggtggtg 26354912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 48184349 - 48184225
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    |||||||||||||||||||||||| |||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48184349 aaagaacatgtaatcatcaaatcagaat------tgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 48184256  T
Q  121 a----tggagatagctctctaaactgaagaa 147  Q
    |    |||||||||||||||||||| |||||    
T  48184255 atggatggagatagctctctaaactaaagaa 48184225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 26014579 - 26014504
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaaca 100  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26014579 aacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaatttcacattaccttacaagttacaaca 26014504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 28 - 222
Target Start/End: Original strand, 6165049 - 6165245
Alignment:
Q  28 atgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggt---ttgtggagagagatgg 124  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||     
T  6165049 atgtaatcatcaaatcagaatcagaattgaagacaattacattcaatttcacattaacttacaagttacaacaattagggtttgttgtggagagagatg- 6165147  T
Q  125 agatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtgg 217  Q
           ||||||||||||||||     | || | || | |      || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6165148 -------tctctaaactgaagaatcgaaacagaagatggaggagtatgcagcggtgatggatggagaaggaggagagtggtcgcggctcaccagcggtgg 6165240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 16764537 - 16764621
Alignment:
Q  28 atgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgt 112  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16764537 atgtaatcatcaaatcagaatcagaattgaagacaattacattcaatttcacattaacttacaagttacaacaattagggtttgt 16764621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 10801568 - 10801650
Alignment:
Q  28 atgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggttt 110  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10801568 atgtaatcatcaaatcagaatcagaattgaagacaattacattcaatttcacattaacttacaagttacaacaattagggttt 10801650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 16764681 - 16764733
Alignment:
Q  170 ggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16764681 ggtgatggatggagaaggaggagagtggtcgcggctcaccagcggtggtgtgg 16764733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 10801711 - 10801765
Alignment:
Q  168 gcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  10801711 gcggtgatggatggagaaggaggagagtggtcgcggctcacaagcggtggtgtgg 10801765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 26014487 - 26014430
Alignment:
Q  165 gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    ||||||||||||||||||||||||| |||||||||||||||| || || |||||||||    
T  26014487 gcggcggtgatggatggagaaggagaagagtggtcgcggctcgccagcagtggtgtgg 26014430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 6313670 - 6313632
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6313670 ggggtgtattggattaggattttaaaagactattttaat 6313632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 25613186 - 25613148
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25613186 ggggtgtattggattaggattttaaaagactattttaat 25613148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 28386558 - 28386596
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28386558 ggggtgtattggattaggattttaaaagactattttaat 28386596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 29395538 - 29395576
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29395538 ggggtgtattggattaggattttaaaagactattttaat 29395576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 46329062 - 46329024
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46329062 ggggtgtattggattaggattttaaaagactattttaat 46329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 48176646 - 48176684
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48176646 ggggtgtattggattaggattttaaaagactattttaat 48176684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 48184200 - 48184143
Alignment:
Q  165 gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    |||||||||||||||||||||| || |||||||||||||||  ||||| |||||||||    
T  48184200 gcggcggtgatggatggagaagaagaagagtggtcgcggcttgccggcagtggtgtgg 48184143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 15835410 - 15835374
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttta 399  Q
    |||||||||||||||||||||||||||||||||||||    
T  15835410 ggggtgtattggattaggattttaaaagactatttta 15835374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 1923096 - 1923131
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    ||||||||||||||||||||||||||||||||||||    
T  1923096 ggggtgtattggattaggattttaaaagactatttt 1923131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 25830360 - 25830398
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  25830360 ggggtgtattgaattaggattttaaaagactattttaat 25830398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 49232078 - 49232040
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  49232078 ggggtgtattggattaggattttaaaagacaattttaat 49232040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 51702688 - 51702650
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  51702688 ggggtgtataggattaggattttaaaagactattttaat 51702650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 48199041 - 48199004
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaa 400  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  48199041 ggggtgtattggattaggattttaaaagacttttttaa 48199004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 48207624 - 48207587
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaa 400  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  48207624 ggggtgtattggattaggattttaaaagacttttttaa 48207587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 45273653 - 45273617
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||| |||||||||    
T  45273653 ggtgtattggattaggattttaaaagattattttaat 45273617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 49197761 - 49197796
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||||||||||||||||| |||||    
T  49197761 ggggtgtattggattaggattttaaaagacaatttt 49197796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 9321619 - 9321657
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  9321619 ggggtgtattgaattgggattttaaaagactattttaat 9321657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 18799443 - 18799413
Alignment:
Q  363 ggggtgtattggattaggattttaaaagact 393  Q
    |||||||||||||||||||||||||||||||    
T  18799443 ggggtgtattggattaggattttaaaagact 18799413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 20111682 - 20111720
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  20111682 ggggtgtatttgattacgattttaaaagactattttaat 20111720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 38535261 - 38535295
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||| |||||||||    
T  38535261 tgtattggattaggattttaaaagattattttaat 38535295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 401
Target Start/End: Original strand, 38557479 - 38557513
Alignment:
Q  367 tgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||| |||||||||    
T  38557479 tgtattggattaggattttaaaagattattttaat 38557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 391
Target Start/End: Complemental strand, 47781353 - 47781325
Alignment:
Q  363 ggggtgtattggattaggattttaaaaga 391  Q
    |||||||||||||||||||||||||||||    
T  47781353 ggggtgtattggattaggattttaaaaga 47781325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 9e-41; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 32397349 - 32397218
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattc-aatttcacattaccttacaagttacaacaattagggtttgtggaga-- 117  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||      
T  32397349 aaagaacatgtaatcatcaaatcagaatcagaattgaaggaaattacattcaaatttcacattaccttataagttacaacaattagggtttgtggagaag 32397250  T
Q  118 ga--gatggagatagctctctaaactgaagaa 147  Q
    ||  |||||||||||||||||||||| |||||    
T  32397249 gatggatggagatagctctctaaactaaagaa 32397218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 9303095 - 9302995
Alignment:
Q  46 aatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagagatggagatagctctctaaactgaag 145  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||| |||||| ||||| ||    
T  9303095 aatcaaaattgaaggaaattacattcaatttcacattacctttcaagtt-taacaattagggtttgtggagagagatggagataactctctgaactggag 9302997  T
Q  146 aa 147  Q
    ||    
T  9302996 aa 9302995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 7171142 - 7171047
Alignment:
Q  22 aagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||||||||||||| |  ||||||||| |||||||||| || ||||||||||  |||||||| ||| |||||| ||||||||||||||||||    
T  7171142 aagaacatgtaatcatcagagaataatcatatttgaaggaaaatagattcaatttcttattaccttgcaatttacaagaattagggtttgtggaga 7171047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 14654645 - 14654704
Alignment:
Q  81 ttaccttacaagttacaacaattagggtttgtggagagagatggagatagctctctaaac 140  Q
    ||||||||||| |||||| || |||||||||||||||||||||||||||||||| |||||    
T  14654645 ttaccttacaatttacaagaactagggtttgtggagagagatggagatagctctttaaac 14654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 32397193 - 32397136
Alignment:
Q  165 gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    ||||||||||||||||||| |||||||||||||||| || || |||||||||||||||    
T  32397193 gcggcggtgatggatggagcaggaggagagtggtcggggatcgccggcggtggtgtgg 32397136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 7498194 - 7498156
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7498194 ggggtgtattggattaggattttaaaagactattttaat 7498156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 30384172 - 30384210
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30384172 ggggtgtattggattaggattttaaaagactattttaat 30384210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 31068514 - 31068476
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31068514 ggggtgtattggattaggattttaaaagactattttaat 31068476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 31896731 - 31896693
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31896731 ggggtgtattggattaggattttaaaagactattttaat 31896693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 16497344 - 16497392
Alignment:
Q  174 atggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  16497344 atggatggagaaggagaagagtggtcgcggctcgccggcagtggtgtgg 16497392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 4199587 - 4199625
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  4199587 ggggtgtattggattaggattttaaaacactattttaat 4199625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 32397808 - 32397747
Alignment:
Q  81 ttaccttacaagttacaacaattagggtttgtggaga--gagatggagatagctctctaaac 140  Q
    ||||||||||| |||||| || |||||||||||||||  ||||||||||||||||| |||||    
T  32397808 ttaccttacaatttacaagaactagggtttgtggagagagagatggagatagctctttaaac 32397747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 400
Target Start/End: Complemental strand, 7104618 - 7104581
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaa 400  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  7104618 ggggtgtattggattaggattttaaaagacttttttaa 7104581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 400
Target Start/End: Original strand, 8790012 - 8790049
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaa 400  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  8790012 ggggtgtattggattaggattttaaaagacttttttaa 8790049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 9302967 - 9302935
Alignment:
Q  168 gcggtgatggatggagaaggaggagagtggtcg 200  Q
    |||||||||||||||||||||||||||||||||    
T  9302967 gcggtgatggatggagaaggaggagagtggtcg 9302935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Complemental strand, 23929409 - 23929374
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||||||||||||||||| |||||    
T  23929409 ggggtgtattggattaggattttaaaagacaatttt 23929374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 14261552 - 14261589
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  14261552 gggtgtattggattatgattttaaaagacaattttaat 14261589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1084 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold1084
Description:

Target: scaffold1084; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 1319 - 1208
Alignment:
Q  25 aacatgtaatcatcaaatcataatcataatt----gaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggagagag 120  Q
    ||||||||||||||| |||| ||||||||||    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| | |||||    
T  1319 aacatgtaatcatcatatcagaatcataattaattgaaggaaattacattcaatttcacattaccttacaaattacaacaattagtgtttgttgtgagag 1220  T
Q  121 atggagatagct 132  Q
    ||| ||||||||    
T  1219 atgaagatagct 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 2972 - 2776
Alignment:
Q  28 atgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggt---ttgtggagagagatgg 124  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||     
T  2972 atgtaatcatcaaatcagaatcagaattgaagacaattacattcaatttcacattaacttacaagttacaacaattagggtttgttgtggagagagatg- 2874  T
Q  125 agatagctctctaaactgaagaaggaggagagta-atcgcg------gcggcggtgatggatggagaaggaggagagtggtcgcggctcaccggcggtgg 217  Q
           ||||||||||||||||     | || | || | |      || |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2873 -------tctctaaactgaagaatcgaaacagaagatggaggagtatgcagcggtgatggatggagaaggaggagagtggtcgcggctcaccagcggtgg 2781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 36401 - 36438
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36401 gggtgtattggattaggattttaaaagactattttaat 36438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 925 - 1067
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattga----aggaaattacattcaatttcacattaccttacaagttacaacaattagggt---ttgtg 113  Q
    ||||||||| ||||||||| |||| |||||||||| |    |||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||    
T  925 aaagaacatataatcatcatatcagaatcataattaattaaaggaaattacattcaatttcacattaccttacaaattacaacaattagggtttgttgtg 1024  T
Q  114 gagagagatggagatagct--ctctaaactgaagaaggaggag 154  Q
    |||||||||| ||||||||   ||||||| ||||| |||||||    
T  1025 gagagagatgaagatagctgaatctaaacagaagatggaggag 1067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 28 - 112
Target Start/End: Original strand, 8383 - 8467
Alignment:
Q  28 atgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgt 112  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8383 atgtaatcatcaaatcagaatcagaattgaagacaattacattcaatttcacattaacttacaagttacaacaattagggtttgt 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 8528 - 8579
Alignment:
Q  171 gtgatggatggagaaggaggagagtggtcgcggctcaccggcggtggtgtgg 222  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8528 gtgatggatggagaaggaggagagtggtcgcggctcaccagcggtggtgtgg 8579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 39727 - 39631
Alignment:
Q  21 aaagaacatgtaatcatcaaatcataatcataattgaaggaaattacattcaatttcacattaccttacaagttacaacaattagggtttgtggaga 117  Q
    |||||||| |||||||||| |  ||||||||| |||||||||| |||||| ||||||| ||||||||  || |||||| ||||||||||||||||||    
T  39727 aaagaacacgtaatcatcagagaataatcatatttgaaggaaaatacatttaatttcatattaccttgaaatttacaaaaattagggtttgtggaga 39631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 3574 - 3612
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3574 ggggtgtattggattaggattttaaaagactattttaat 3612  T

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Target: scaffold0492 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 399
Target Start/End: Complemental strand, 12130 - 12094
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttta 399  Q
    |||||||||||||||||||||||||||||||||||||    
T  12130 ggggtgtattggattaggattttaaaagactatttta 12094  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 57170 - 57208
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  57170 ggggtgtattggattagaattttaaaagactattttaat 57208  T

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Target: scaffold0110 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 363 - 396
Target Start/End: Original strand, 38750 - 38783
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatt 396  Q
    ||||||||||||||||||||||||||||||||||    
T  38750 ggggtgtattggattaggattttaaaagactatt 38783  T

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Target: scaffold0287 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 398
Target Start/End: Original strand, 10863 - 10898
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactatttt 398  Q
    |||||||||||||||||||||||||||||| |||||    
T  10863 ggggtgtattggattaggattttaaaagacaatttt 10898  T

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Target: scaffold1521 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 1292 - 1330
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  1292 ggggagtattgaattaggattttaaaagactattttaat 1330  T

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Target: scaffold0383 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Original strand, 16147 - 16185
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  16147 ggggagtattgaattaggattttaaaagactattttaat 16185  T

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Target: scaffold0152 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 363 - 401
Target Start/End: Complemental strand, 29427 - 29389
Alignment:
Q  363 ggggtgtattggattaggattttaaaagactattttaat 401  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  29427 ggggagtattgaattaggattttaaaagactattttaat 29389  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 401
Target Start/End: Original strand, 3114 - 3151
Alignment:
Q  364 gggtgtattggattaggattttaaaagactattttaat 401  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  3114 gggtgtattagattaagattttaaaagactattttaat 3151  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 21865 - 21829
Alignment:
Q  365 ggtgtattggattaggattttaaaagactattttaat 401  Q
    |||||||||||||| |||||||||||| |||||||||    
T  21865 ggtgtattggattaagattttaaaagattattttaat 21829  T

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