View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11824_low_7 (Length: 238)
Name: NF11824_low_7
Description: NF11824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11824_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 10531263 - 10531064
Alignment:
| Q |
21 |
ttgacatcattgtacagtccttacagtaaagtctactcctatatctcgattcgctatttgtcgtgcgaactttctagaatcatttcctcaaataaaaact |
120 |
Q |
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| T |
10531263 |
ttgacatcattgtacagtc-ttacagtaaagtctactcctatatctcgattcgctatttgtcgtgcgaactttctagaatcatttcctcaaataaaaact |
10531165 |
T |
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| Q |
121 |
ccacaacaaagaaatgaacacttccttcacaatctagcgttcttcttcaacatgtcgcacaatcgcatcaccaccgattcccctctctctcatcgcatag |
220 |
Q |
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| T |
10531164 |
ccacagcaaagaaatgaacacttccttcacaatctagcgttcttcttcaacatgtcgcacaatcgcatcaccaccgattcccctctctctcatcgcatag |
10531065 |
T |
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