View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11825_low_11 (Length: 434)
Name: NF11825_low_11
Description: NF11825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11825_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 11 - 420
Target Start/End: Original strand, 11349984 - 11350393
Alignment:
| Q |
11 |
agaaagttgaagtagctataaaagttgtctcgggtctcttaaagctcgatttataattgagagcataatatactactttgttctcaaatgttgtattagg |
110 |
Q |
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| T |
11349984 |
agaaagttgaagcagttataaaagttgtctcgggcctcttaaaggtcgatttgtaattgagagcataatatactacttggttctcaaatgttgtattagg |
11350083 |
T |
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| Q |
111 |
caagaaatctaataataagggaggcatgtgtgttaactactctggtcttaataggacattccccgccccccaaacatttgtaaaatagttgataattcat |
210 |
Q |
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| T |
11350084 |
caagaaatctaataataagtgaggcatgtgtgttaactactctggtctcaataggacattccccgccccccaaacatttataaaatagttgataattcat |
11350183 |
T |
|
| Q |
211 |
ttgagtttaaattaccatcattcatggattcgtactctagctataactagatccccatggatcctaaggaccaagaaaatagggctttcttgactaagga |
310 |
Q |
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| T |
11350184 |
ttgagtttaaattaccatcattcatggattcgtactctagttataactagatccccatggatcctaaggaccaagaaaatagggctttcttgactaagga |
11350283 |
T |
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| Q |
311 |
caagaaatcattgctataaggtaatgttgttcggccataaaatcaccgaagccacttaccaaagatgatgaatgagatattcaaaaaccaaatatgagac |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
11350284 |
caagaaatcattgctataaggtaatgttgttcggccataaaatcaccgaagccacttaccaaagatgatgaatgagatattcaaaaacaaaatatgagac |
11350383 |
T |
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| Q |
411 |
atgcttgatg |
420 |
Q |
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| T |
11350384 |
atgcttgatg |
11350393 |
T |
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