View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11825_low_16 (Length: 405)

Name: NF11825_low_16
Description: NF11825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11825_low_16
NF11825_low_16
[»] chr5 (28 HSPs)
chr5 (20-270)||(8338734-8338982)
chr5 (279-393)||(33149628-33149742)
chr5 (283-393)||(36732932-36733042)
chr5 (280-393)||(40145404-40145517)
chr5 (286-393)||(18520874-18520981)
chr5 (283-393)||(2740274-2740384)
chr5 (281-393)||(14831812-14831924)
chr5 (281-393)||(28177773-28177885)
chr5 (282-393)||(35785198-35785309)
chr5 (283-393)||(13811652-13811762)
chr5 (281-390)||(42414295-42414404)
chr5 (283-393)||(6679698-6679808)
chr5 (283-393)||(35943882-35943992)
chr5 (283-393)||(15409600-15409710)
chr5 (282-392)||(26720515-26720625)
chr5 (282-392)||(26990264-26990374)
chr5 (284-393)||(36875602-36875702)
chr5 (283-387)||(3921261-3921365)
chr5 (283-387)||(2252164-2252268)
chr5 (283-393)||(20073506-20073616)
chr5 (327-393)||(21370048-21370114)
chr5 (283-392)||(31008988-31009097)
chr5 (283-372)||(41470427-41470516)
chr5 (331-394)||(31132392-31132455)
chr5 (283-348)||(33825359-33825424)
chr5 (283-387)||(39688893-39688997)
chr5 (283-387)||(9603813-9603917)
chr5 (284-348)||(16327902-16327966)
[»] chr1 (31 HSPs)
chr1 (282-393)||(9474866-9474977)
chr1 (283-393)||(3000319-3000429)
chr1 (283-393)||(2581915-2582025)
chr1 (283-393)||(38595154-38595264)
chr1 (283-393)||(41758805-41758915)
chr1 (280-393)||(27564725-27564838)
chr1 (281-393)||(47452310-47452422)
chr1 (282-390)||(48716275-48716383)
chr1 (286-401)||(44548358-44548473)
chr1 (283-393)||(8346378-8346488)
chr1 (283-393)||(38632311-38632421)
chr1 (283-393)||(50630458-50630568)
chr1 (283-393)||(32813247-32813357)
chr1 (283-393)||(51898673-51898783)
chr1 (283-393)||(43132-43242)
chr1 (281-393)||(37649196-37649308)
chr1 (283-393)||(23597081-23597191)
chr1 (303-392)||(45044551-45044640)
chr1 (282-387)||(50590996-50591101)
chr1 (313-390)||(13414791-13414868)
chr1 (281-394)||(26440732-26440845)
chr1 (282-387)||(41608489-41608594)
chr1 (283-387)||(5958996-5959100)
chr1 (286-394)||(26274435-26274543)
chr1 (284-393)||(11152368-11152476)
chr1 (283-392)||(37926429-37926538)
chr1 (283-393)||(49811517-49811627)
chr1 (281-367)||(6260868-6260954)
chr1 (281-387)||(47748441-47748546)
chr1 (288-393)||(44453984-44454089)
chr1 (279-383)||(3302533-3302637)
[»] chr4 (34 HSPs)
chr4 (282-392)||(11511453-11511563)
chr4 (282-393)||(6034043-6034154)
chr4 (283-393)||(480437-480547)
chr4 (283-393)||(24995097-24995207)
chr4 (283-393)||(48183039-48183149)
chr4 (283-393)||(29234235-29234345)
chr4 (283-393)||(41236347-41236457)
chr4 (283-393)||(50052418-50052528)
chr4 (283-393)||(42044357-42044467)
chr4 (282-393)||(54473523-54473634)
chr4 (281-387)||(3481652-3481758)
chr4 (283-393)||(29239886-29239996)
chr4 (283-393)||(23608235-23608345)
chr4 (282-393)||(31910191-31910302)
chr4 (282-393)||(50526161-50526272)
chr4 (281-393)||(40574777-40574889)
chr4 (321-401)||(41823920-41824000)
chr4 (288-393)||(53352556-53352660)
chr4 (283-387)||(19670712-19670816)
chr4 (283-387)||(29977885-29977989)
chr4 (283-387)||(47986208-47986312)
chr4 (283-387)||(50813888-50813992)
chr4 (283-351)||(55475191-55475259)
chr4 (301-387)||(17983739-17983825)
chr4 (283-393)||(48647716-48647826)
chr4 (291-384)||(28480267-28480360)
chr4 (291-384)||(28481142-28481235)
chr4 (291-384)||(28482017-28482110)
chr4 (283-387)||(8343159-8343263)
chr4 (283-387)||(32766958-32767062)
chr4 (283-387)||(47104544-47104648)
chr4 (283-351)||(29547991-29548059)
chr4 (291-387)||(29589736-29589831)
chr4 (279-351)||(18924527-18924599)
[»] chr2 (32 HSPs)
chr2 (283-393)||(30915463-30915573)
chr2 (283-401)||(7465717-7465835)
chr2 (283-393)||(17473020-17473130)
chr2 (283-393)||(9058480-9058590)
chr2 (283-392)||(5574479-5574588)
chr2 (281-393)||(13438341-13438453)
chr2 (281-393)||(19930810-19930922)
chr2 (286-393)||(28863458-28863565)
chr2 (282-393)||(40701477-40701588)
chr2 (283-393)||(10249372-10249482)
chr2 (283-393)||(33436090-33436200)
chr2 (279-393)||(28381645-28381759)
chr2 (283-393)||(32505638-32505748)
chr2 (281-393)||(40613892-40614004)
chr2 (281-387)||(27864702-27864808)
chr2 (283-393)||(20700815-20700925)
chr2 (283-393)||(38273132-38273242)
chr2 (282-393)||(4060684-4060795)
chr2 (283-392)||(38882802-38882913)
chr2 (283-393)||(42257193-42257303)
chr2 (283-392)||(26891495-26891604)
chr2 (284-387)||(41575138-41575242)
chr2 (283-393)||(36168836-36168946)
chr2 (282-387)||(17820000-17820105)
chr2 (283-348)||(33436211-33436276)
chr2 (281-387)||(43490119-43490225)
chr2 (289-393)||(3439985-3440089)
chr2 (283-387)||(38732354-38732458)
chr2 (283-393)||(2533124-2533233)
chr2 (301-387)||(2997483-2997569)
chr2 (299-387)||(13365369-13365457)
chr2 (283-387)||(45097731-45097835)
[»] chr3 (38 HSPs)
chr3 (280-393)||(53982008-53982121)
chr3 (288-393)||(52629305-52629410)
chr3 (282-393)||(33644199-33644310)
chr3 (283-393)||(49607414-49607524)
chr3 (283-393)||(54868885-54868995)
chr3 (283-392)||(11095346-11095453)
chr3 (284-393)||(31456690-31456799)
chr3 (287-394)||(48587080-48587187)
chr3 (283-393)||(8076393-8076503)
chr3 (283-393)||(17470405-17470515)
chr3 (283-393)||(24699944-24700054)
chr3 (283-393)||(33118841-33118951)
chr3 (283-392)||(27714882-27714991)
chr3 (279-393)||(26141522-26141636)
chr3 (283-393)||(9562999-9563109)
chr3 (283-393)||(41189754-41189864)
chr3 (283-387)||(14623835-14623939)
chr3 (288-393)||(26754700-26754805)
chr3 (282-393)||(20764905-20765016)
chr3 (282-393)||(30801723-30801834)
chr3 (283-393)||(51419350-51419460)
chr3 (283-364)||(35536626-35536707)
chr3 (283-393)||(36707418-36707524)
chr3 (284-387)||(13898051-13898154)
chr3 (283-393)||(11347912-11348022)
chr3 (283-393)||(11907371-11907481)
chr3 (283-365)||(41080709-41080790)
chr3 (283-393)||(47531865-47531975)
chr3 (283-348)||(8956762-8956827)
chr3 (282-351)||(45058585-45058653)
chr3 (288-387)||(42823116-42823215)
chr3 (283-351)||(36331410-36331478)
chr3 (283-387)||(1758452-1758558)
chr3 (312-387)||(36331325-36331400)
chr3 (291-393)||(39670019-39670121)
chr3 (283-393)||(48375696-48375806)
chr3 (283-348)||(35965809-35965874)
chr3 (290-386)||(35093592-35093688)
[»] chr8 (30 HSPs)
chr8 (279-393)||(34012286-34012400)
chr8 (281-393)||(15197331-15197443)
chr8 (283-393)||(12831047-12831157)
chr8 (281-393)||(504111-504223)
chr8 (283-393)||(14547922-14548032)
chr8 (280-393)||(23122587-23122700)
chr8 (282-393)||(40423933-40424044)
chr8 (283-393)||(44507077-44507187)
chr8 (283-393)||(1179930-1180040)
chr8 (284-393)||(5957831-5957940)
chr8 (283-387)||(10284627-10284731)
chr8 (283-393)||(37038479-37038589)
chr8 (281-393)||(43414571-43414683)
chr8 (283-393)||(4854853-4854963)
chr8 (282-388)||(15048177-15048282)
chr8 (288-393)||(10621077-10621182)
chr8 (302-393)||(8841422-8841513)
chr8 (283-393)||(15258919-15259029)
chr8 (279-348)||(20074969-20075038)
chr8 (283-387)||(16383377-16383481)
chr8 (327-393)||(9122229-9122295)
chr8 (283-351)||(30479506-30479574)
chr8 (283-387)||(34307216-34307320)
chr8 (283-387)||(17443825-17443929)
chr8 (283-387)||(24307789-24307893)
chr8 (283-366)||(14055609-14055692)
chr8 (283-387)||(42221515-42221619)
chr8 (283-387)||(16056397-16056501)
chr8 (283-351)||(24307629-24307697)
chr8 (325-392)||(38229470-38229537)
[»] chr7 (35 HSPs)
chr7 (283-393)||(8080373-8080483)
chr7 (281-393)||(35137531-35137643)
chr7 (283-393)||(4999504-4999614)
chr7 (283-393)||(7389389-7389499)
chr7 (282-393)||(38267039-38267150)
chr7 (283-392)||(36361904-36362013)
chr7 (281-393)||(19329840-19329952)
chr7 (283-394)||(3434562-3434673)
chr7 (283-393)||(38837217-38837327)
chr7 (283-393)||(40957707-40957817)
chr7 (283-392)||(36362026-36362135)
chr7 (286-393)||(3783998-3784105)
chr7 (283-392)||(19436178-19436287)
chr7 (284-393)||(32951483-32951592)
chr7 (281-387)||(8238210-8238317)
chr7 (281-393)||(3694365-3694477)
chr7 (283-387)||(35468851-35468955)
chr7 (281-386)||(21234399-21234504)
chr7 (283-387)||(38044197-38044301)
chr7 (283-393)||(36208173-36208283)
chr7 (288-401)||(35522881-35522994)
chr7 (283-387)||(22343361-22343465)
chr7 (283-387)||(40846109-40846213)
chr7 (283-387)||(41915741-41915845)
chr7 (283-393)||(46033791-46033901)
chr7 (282-387)||(32564422-32564527)
chr7 (283-393)||(11044188-11044288)
chr7 (283-377)||(46374808-46374902)
chr7 (282-387)||(41423681-41423786)
chr7 (283-383)||(7727906-7728006)
chr7 (283-393)||(26296644-26296754)
chr7 (283-348)||(10343598-10343663)
chr7 (283-387)||(18207180-18207283)
chr7 (281-335)||(31735882-31735936)
chr7 (282-387)||(39255920-39256024)
[»] chr6 (19 HSPs)
chr6 (279-393)||(32869674-32869788)
chr6 (286-393)||(22880648-22880755)
chr6 (281-393)||(17598552-17598664)
chr6 (283-393)||(11427616-11427728)
chr6 (283-393)||(6209455-6209565)
chr6 (283-392)||(29857827-29857936)
chr6 (282-393)||(31109390-31109501)
chr6 (281-387)||(31953026-31953132)
chr6 (283-393)||(31976248-31976358)
chr6 (283-393)||(15832577-15832687)
chr6 (282-387)||(15508020-15508125)
chr6 (283-387)||(15990038-15990142)
chr6 (283-387)||(30341356-30341460)
chr6 (314-393)||(23128117-23128196)
chr6 (283-392)||(31110752-31110859)
chr6 (287-388)||(28536483-28536582)
chr6 (288-387)||(9379708-9379807)
chr6 (284-393)||(946377-946486)
chr6 (282-387)||(4231547-4231652)
[»] scaffold0321 (1 HSPs)
scaffold0321 (283-393)||(10099-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (283-392)||(4029-4138)
[»] scaffold1268 (1 HSPs)
scaffold1268 (281-393)||(919-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (281-393)||(919-1031)
[»] scaffold0018 (1 HSPs)
scaffold0018 (299-387)||(152514-152602)
[»] scaffold0110 (1 HSPs)
scaffold0110 (282-387)||(8859-8964)


Alignment Details
Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 20 - 270
Target Start/End: Complemental strand, 8338982 - 8338734
Alignment:
Q  20 ttttcttcgtttggatgataccaccattgtttctgcttgcttagttttggatctgttttggtcgttgccggttttctcagcaaagctacttgttttcagg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                     ||||||    
T  8338982 ttttcttcgtttggatgataccaccattgtttctgcttgcttagttttggatctgttttggtcgttgccggtt---------------------ttcagg 8338904  T
Q  120 caagctagtgagttaagtttctctcacagactgtatctcccttaacaagagaaagagggaaaacaagctactaagcttcttc-------------aagag 206  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||             |||||    
T  8338903 caagctagtgagttaagtttctctcacagacggtatctcccttaacaagagaaagagggaaaacaagctactaagcttcttcaagaagcttcttcaagag 8338804  T
Q  207 cagagtgagcagcccttacctt------tctataccttcttttttccatttcttactagtttttcgtgcc 270  Q
    ||||||||| ||||||||||||      ||||||||||||||||||||||||||||||||||||||||||    
T  8338803 cagagtgagtagcccttacctttctatgtctataccttcttttttccatttcttactagtttttcgtgcc 8338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 279 - 393
Target Start/End: Complemental strand, 33149742 - 33149628
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 378  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||| |||||    
T  33149742 ttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacac 33149643  T
Q  379 tttctcttttctctc 393  Q
    |||||||||||||||    
T  33149642 tttctcttttctctc 33149628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 36733042 - 36732932
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||| |||| |||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  36732942 tcttttctctc 36732932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 280 - 393
Target Start/End: Original strand, 40145404 - 40145517
Alignment:
Q  280 tatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 379  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||    
T  40145404 tatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 40145503  T
Q  380 ttctcttttctctc 393  Q
    ||||||||||||||    
T  40145504 ttctcttttctctc 40145517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 18520981 - 18520874
Alignment:
Q  286 taatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 385  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T
Q  386 tttctctc 393  Q
    ||| ||||    
T  18520881 tttatctc 18520874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 2740274 - 2740384
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  2740374 tcttttctctc 2740384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 14831812 - 14831924
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||| |||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 14831911  T
Q  381 tctcttttctctc 393  Q
    ||| |||| ||||    
T  14831912 tcttttttttctc 14831924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 28177773 - 28177885
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||||||| |||||| | |||||||||||||||||||||||| |||||| ||||| || ||||| ||||||||| ||||||||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  28177873 tctcttttctctc 28177885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 35785198 - 35785309
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||| ||||| ||||| ||||||| |||| |||| ||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacacttt 35785297  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  35785298 ctcttttctctc 35785309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 13811652 - 13811762
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||| ||||||||||||||||||| | |||||||| | ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13811751  T
Q  383 tcttttctctc 393  Q
    |||| ||||||    
T  13811752 tcttctctctc 13811762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 42414404 - 42414295
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||  ||| | |||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| |||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 42414305  T
Q  381 tctcttttct 390  Q
    | ||||||||    
T  42414304 tatcttttct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 6679698 - 6679808
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| | |||| | |||||||||| ||||||||||||| |||||| ||||| || ||||| ||||||||| ||||||||| ||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  6679798 tcttttctctc 6679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 35943992 - 35943882
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||||||||||||| | |||||||| | ||||||||||||| |||||| ||||| ||||| ||||||| |||  |||| |||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  35943892 tctttcctctc 35943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 15409710 - 15409600
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| |  |||||||  |||||||||||||| |||||| ||||| |||| ||| ||||||||| |||| |||||| ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  15409610 tcttttctctc 15409600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 392
Target Start/End: Original strand, 26720515 - 26720625
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| |||||| | |||||||||||||| ||||| ||| |||||| ||||| || | ||| |||| |||| |||| ||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  382 ctcttttctct 392  Q
    |||||||||||    
T  26720615 ctcttttctct 26720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 392
Target Start/End: Original strand, 26990264 - 26990374
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| |||||| | |||||||||||||| ||||| ||| |||||| ||||| || | ||| |||| |||| |||| ||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  382 ctcttttctct 392  Q
    |||||||||||    
T  26990364 ctcttttctct 26990374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 36875702 - 36875602
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||         |||||||||||| |||| |||| ||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacactttct 36875612  T
Q  384 cttttctctc 393  Q
    ||||| ||||    
T  36875611 cttttttctc 36875602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 3921365 - 3921261
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  383 tcttt 387  Q
    |||||    
T  3921265 tcttt 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 2252268 - 2252164
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  383 tcttt 387  Q
    |||||    
T  2252168 tcttt 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 20073616 - 20073506
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||| ||||||| | ||||||  |||||||||||||||||| ||||||||||| |  || ||   ||||||||||| | |||| |||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  383 tcttttctctc 393  Q
    | ||| |||||    
T  20073516 tatttcctctc 20073506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 21370048 - 21370114
Alignment:
Q  327 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 393  Q
    ||||||||  |||||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctc 21370114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 31008988 - 31009097
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||| |  |||||||  |||  ||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 31009087  T
Q  383 tcttttctct 392  Q
    | ||| ||||    
T  31009088 tatttcctct 31009097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 372
Target Start/End: Complemental strand, 41470516 - 41470427
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaa 372  Q
    ||||||| ||||||||||||| |||| | |||||||| ||||| | |  || |||||||| ||||| |||||||||||||||||| ||||    
T  41470516 gagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaa 41470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 394
Target Start/End: Original strand, 31132392 - 31132455
Alignment:
Q  331 ccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctct 394  Q
    ||||| |||||| ||||| |||||||||||||||||| |||| || ||||| ||||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttctctct 31132455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 33825424 - 33825359
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    |||||||||| ||||||||  ||||| | ||||||||| | ||||||||||||||||||| |||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgaca 33825359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 39688997 - 39688893
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||  | |||||||| || |||||||||||| |||||| ||| |||| ||||  || |||||| | ||  ||||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  383 tcttt 387  Q
    |||||    
T  39688897 tcttt 39688893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 9603813 - 9603917
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| ||| |||||| |   ||||||| | || ||||| ||| |||||| |||||  | ||||  |||||||| ||||| |||||||||    
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttc 9603912  T
Q  383 tcttt 387  Q
    |||||    
T  9603913 tcttt 9603917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 16327902 - 16327966
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    |||||||||| ||| | | |||||| | |||||||| || ||||||||||||||||||| |||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgaca 16327966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 9474977 - 9474866
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  9474877 ctcttttctctc 9474866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 3000319 - 3000429
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  3000419 tcttttctctc 3000429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 2581915 - 2582025
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  383 tcttttctctc 393  Q
    | |||||||||    
T  2582015 ttttttctctc 2582025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 38595154 - 38595264
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| ||||| |||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  38595254 tcttttctctc 38595264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 41758805 - 41758915
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||| ||||| |||||| ||||| |||||||| ||||||||| ||||||||||||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  41758905 tcttttctctc 41758915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 280 - 393
Target Start/End: Complemental strand, 27564838 - 27564725
Alignment:
Q  280 tatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 379  Q
    |||||||||||||||||||||| |||||| | |||||||||| ||||||||||||| |||||| ||||| ||| |||||||||||||| |||| ||||||    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T
Q  380 ttctcttttctctc 393  Q
    ||||||||||||||    
T  27564738 ttctcttttctctc 27564725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 47452422 - 47452310
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||| | ||| ||||||||||||| |||| |||| |||||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  47452322 tctcttttctctc 47452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 48716383 - 48716275
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T
Q  382 ctcttttct 390  Q
     ||||||||    
T  48716283 atcttttct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 401
Target Start/End: Complemental strand, 44548473 - 44548358
Alignment:
Q  286 taatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 385  Q
    |||||||||||||||| | |||| | |||||||||| ||||| ||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  386 tttctctctgcttctc 401  Q
    ||||||||| ||||||    
T  44548373 tttctctcttcttctc 44548358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 8346488 - 8346378
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||| |||| |||| | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||| | |||| |||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  8346388 tcttttctctc 8346378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 38632421 - 38632311
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||| ||| ||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  38632321 tcttttctctc 38632311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 50630458 - 50630568
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||| |||||||| | |||||||| ||||||  ||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  50630558 tcttttctctc 50630568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 32813247 - 32813357
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| | |||||||||||||| ||||||||| |||||| ||||| || ||||| ||||||||| |||| |||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  32813347 tcttttctctc 32813357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 51898783 - 51898673
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  383 tcttttctctc 393  Q
    | ||| |||||    
T  51898683 tatttcctctc 51898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 43132 - 43242
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||  |||||    ||||||| ||||||||||||||| |||||| ||||| |||||||||||||| ||| |||| |||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  43232 tcttttctctc 43242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 37649196 - 37649308
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||||||||||| | |||| | ||||||||| |||||||||||||| |||||| ||||| || |||||||| |  ||| |||| |||||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactt 37649295  T
Q  381 tctcttttctctc 393  Q
    || ||||||||||    
T  37649296 tcccttttctctc 37649308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 23597191 - 23597081
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| | |||| | ||||||||| |||||| |||||||||||||| ||||| || | ||||| ||||  | |||||||||||||     
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttta 23597092  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  23597091 tcttttctctc 23597081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 303 - 392
Target Start/End: Complemental strand, 45044640 - 45044551
Alignment:
Q  303 ccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctct 392  Q
    |||||| | |||||||||| ||||||||||| | |||||| |||||||||| ||| ||||||||| ||||||||| ||||||||||||||    
T  45044640 ccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctcttttctct 45044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 50591101 - 50590996
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  382 ctcttt 387  Q
    ||||||    
T  50591001 ctcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 13414791 - 13414868
Alignment:
Q  313 caatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttct 390  Q
    ||||||||||||||||||||||| |||||| | ||| |||||||||||||||||  |||| |||| ||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttct 13414868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 281 - 394
Target Start/End: Original strand, 26440732 - 26440845
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| | |||| ||||||| ||||||||  ||||||||||||| ||||||||| |||||| ||||| || | ||| |||| |||| | || |||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactt 26440831  T
Q  381 tctcttttctctct 394  Q
    ||||||||||||||    
T  26440832 tctcttttctctct 26440845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 41608594 - 41608489
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||| ||| |||||| | ||||||||||| ||||||| |||| |||||| |||||||| | ||  ||||||||||||||  |||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  382 ctcttt 387  Q
    ||||||    
T  41608494 ctcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 5959100 - 5958996
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||  | ||||||||||  |||||||||||| |||||| |||||||| ||||  ||||||||| ||||  ||||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  383 tcttt 387  Q
    |||||    
T  5959000 tcttt 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 286 - 394
Target Start/End: Original strand, 26274435 - 26274543
Alignment:
Q  286 taatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 385  Q
    ||||||||||||||||||||||  | |||||||| | ||||||| ||||| |||||| |||||  |||||||||||| || | ||||  ||||||| |||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttct 26274534  T
Q  386 tttctctct 394  Q
    |||||||||    
T  26274535 tttctctct 26274543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 11152476 - 11152368
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    |||||||| ||||||||||| |||| | ||||||||||||| |||| ||||| |||||| ||||| ||||||| || ||||||| |||| ||| ||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T
Q  384 cttttctctc 393  Q
     ||| |||||    
T  11152377 ttttcctctc 11152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 37926538 - 37926429
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||| | | |||| | |||||||| | ||| |||||||||||||||| ||||| || | ||| |||| |||||||||  ||||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  37926438 tcttttctct 37926429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 49811627 - 49811517
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||| ||||||| |||||| |  ||||||||| ||||||| ||||| |||||| ||||| |||| ||  | ||| ||| |||| |||||||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  49811527 tcttttctctc 49811517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 6260868 - 6260954
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccg 367  Q
    |||||| |||||| ||||| | |||||| | | ||||||||| |  |||||||||||||||| | |||||| |||||||||||||||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccg 6260954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 47748441 - 47748546
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||| | |||||||| | ||||||||||||| |||||||| |||||||| |||||||| | ||  |||| |||| ||||  | ||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  381 tctcttt 387  Q
    |||||||    
T  47748540 tctcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 44453984 - 44454089
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||||||||||| |||  | |||||||| |  |||| ||||||| |||||| |||||||| || ||||||| |||  |||| |||||||| |||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttcttt 44454083  T
Q  388 tctctc 393  Q
     |||||    
T  44454084 cctctc 44454089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 383
Target Start/End: Complemental strand, 3302637 - 3302533
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 378  Q
    ||||||||||||||||||| ||| |||||| |  ||||| |  | | |||||||||| |||||| ||||| ||| |||  |||||||| ||||| |||||    
T  3302637 ttatgagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacac 3302538  T
Q  379 tttct 383  Q
    |||||    
T  3302537 tttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 282 - 392
Target Start/End: Complemental strand, 11511563 - 11511453
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  382 ctcttttctct 392  Q
    |||||||||||    
T  11511463 ctcttttctct 11511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 6034043 - 6034154
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||| ||||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  6034143 ctcttttctctc 6034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 480547 - 480437
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  480447 tcttttctctc 480437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 24995207 - 24995097
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  24995107 tcttttctctc 24995097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 48183149 - 48183039
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  48183049 tcttttctctc 48183039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 29234345 - 29234235
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||  || |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  29234245 tcttttctctc 29234235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 41236347 - 41236457
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  41236447 tcttttctctc 41236457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 50052528 - 50052418
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  50052428 tctttcctctc 50052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 42044467 - 42044357
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||| ||||  ||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  42044367 tcttttctctc 42044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 54473634 - 54473523
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| |  ||||||||| ||||||||||||| |||||| | ||| |||||||||||||||||| |||| ||||||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T
Q  382 ctcttttctctc 393  Q
     |||||||||||    
T  54473534 atcttttctctc 54473523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 3481652 - 3481758
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||| |||||| |||||  ||||||||||||||||  |||| |||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactt 3481751  T
Q  381 tctcttt 387  Q
    |||||||    
T  3481752 tctcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 29239886 - 29239996
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||||| | ||| |||||||||||||||||  |||| |||||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  29239986 tctttcctctc 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 23608235 - 23608345
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||||||||||| |||||| ||||| ||||||||||| || ||  |||| |||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  383 tcttttctctc 393  Q
    |||||| ||||    
T  23608335 tcttttatctc 23608345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 31910191 - 31910302
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| |||||| |  |||||||| |||||||||||||| |||||| |||||  ||| ||| ||||||||| |||| ||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  31910291 ctcttttctctc 31910302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 50526272 - 50526161
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    |||||||||||||||||||| | |||| | |||||||||||||||||||||||| |||||| ||||| || ||||||||||  ||| |||| ||| ||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgcttt 50526173  T
Q  382 ctcttttctctc 393  Q
    || ||| |||||    
T  50526172 ctatttcctctc 50526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 40574777 - 40574889
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||||||| |||||| | | |||||||||||||||||||||| |||||| ||||| |  |  || |||| |||| |||| |||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactt 40574876  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  40574877 tctcttttctctc 40574889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 321 - 401
Target Start/End: Original strand, 41823920 - 41824000
Alignment:
Q  321 cctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctctgcttctc 401  Q
    ||||| ||||||||| |||||| ||||| |||||||| ||||||||| |||| ||||||||||||||||||||| ||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctc 41824000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 53352660 - 53352556
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    ||||||||||||||||||||| | ||||||||  |||| ||||| ||| |||||| ||||| ||||| | |||||||||| |||| || |||||||||||    
T  53352660 atgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T
Q  388 tctctc 393  Q
    ||||||    
T  53352561 tctctc 53352556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 19670816 - 19670712
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| ||||||| |||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  383 tcttt 387  Q
    |||||    
T  19670716 tcttt 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 29977885 - 29977989
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| | | || ||| | ||||||||||| || ||||||||| |||||| ||||| |||||||  ||||||||  |||| |||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  383 tcttt 387  Q
    |||||    
T  29977985 tcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 47986208 - 47986312
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | |||||||| || |||||| ||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  383 tcttt 387  Q
    |||||    
T  47986308 tcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 50813992 - 50813888
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||| ||||| | | ||||||||| |||||||||||| |||||| |||||||| ||||  || |||||| ||||  ||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  383 tcttt 387  Q
    |||||    
T  50813892 tcttt 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 55475191 - 55475259
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    |||| |||||||||| ||| |||||| | |||||||||||||||||||||||| |||||| ||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgt 55475259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 387
Target Start/End: Complemental strand, 17983825 - 17983739
Alignment:
Q  301 acccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 48647826 - 48647716
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||| ||||| ||| |||||| || |||||||||  || |||||||||||||||| | ||| || ||||||||||| ||| |||| |||| ||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  48647726 tctttcctctc 48647716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 28480360 - 28480267
Alignment:
Q  291 atacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctc 384  Q
    ||||||||||| |||||| |  ||||||||   || |||| |||| |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  28480360 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 28481235 - 28481142
Alignment:
Q  291 atacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctc 384  Q
    ||||||||||| |||||| |  ||||||||   || |||| |||| |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  28481235 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 384
Target Start/End: Complemental strand, 28482110 - 28482017
Alignment:
Q  291 atacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctc 384  Q
    ||||||||||| |||||| |  ||||||||   || |||| |||| |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  28482110 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 8343263 - 8343159
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||| | |||||||| ||||||||||| |||||||||| |||||||| | ||  ||||||||| | ||  | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  383 tcttt 387  Q
    |||||    
T  8343163 tcttt 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 32766958 - 32767062
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||| ||||| | ||||||||||| |||||||||| | |||||| |||||||| | ||  ||||||| | ||||  ||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  383 tcttt 387  Q
    |||||    
T  32767058 tcttt 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 47104544 - 47104648
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||| |||||||  |||||||  |||||||| || ||||||||||| |||||||||||| || ||    | ||||||  ||||||||||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttc 47104643  T
Q  383 tcttt 387  Q
    |||||    
T  47104644 tcttt 47104648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 29548059 - 29547991
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    |||| |||||||||| ||| |||||| | |||||||| || |||||||||||| |||||| ||||||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgt 29547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 291 - 387
Target Start/End: Complemental strand, 29589831 - 29589736
Alignment:
Q  291 atacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    ||||||| |||||||||| | ||||||||||| |||||||||||| |||||| ||| |||| | ||  ||||||||  ||||  |||||||||||||    
T  29589831 atacataaacacccttagtt-gcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 18924599 - 18924527
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    |||||||| ||||| |||| | |||||||| | ||||||||||| |||| | ||||| |||||| ||||||||    
T  18924599 ttatgagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgt 18924527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 30915463 - 30915573
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  30915563 tcttttctctc 30915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 7465835 - 7465717
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  383 tcttttctctctgcttctc 401  Q
    |||||| ||||| ||||||    
T  7465735 tcttttatctcttcttctc 7465717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 17473020 - 17473130
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  17473120 tcttttctctc 17473130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 9058480 - 9058590
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| |||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  9058580 tcttttctctc 9058590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 5574588 - 5574479
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  5574488 tcttttctct 5574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 13438341 - 13438453
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||||||| |  ||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  13438441 tctcttttctctc 13438453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 19930922 - 19930810
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||| ||||||||||||||||||||||| | |||||||||||||||||| ||||| |||||| ||||| ||||||| |||||||||| ||||||||||||    
T  19930922 atgaataatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactt 19930823  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  19930822 tctcttttctctc 19930810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 286 - 393
Target Start/End: Original strand, 28863458 - 28863565
Alignment:
Q  286 taatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 385  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  386 tttctctc 393  Q
    ||| ||||    
T  28863558 tttatctc 28863565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 40701477 - 40701588
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||||| |||| ||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 40701576  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  40701577 ctcttttctctc 40701588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 10249482 - 10249372
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| |  ||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  10249382 tcttttctctc 10249372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 33436200 - 33436090
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  33436100 tctttcctctc 33436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 279 - 393
Target Start/End: Complemental strand, 28381759 - 28381645
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 378  Q
    |||||||||||||||||||||||||||||| | |||||||||| || |||||||||| |||||| ||||| |||||||| ||||| ||| |||| |||||    
T  28381759 ttatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacac 28381660  T
Q  379 tttctcttttctctc 393  Q
    |||||||||||||||    
T  28381659 tttctcttttctctc 28381645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 32505748 - 32505638
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| |  ||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  383 tcttttctctc 393  Q
    | |||||||||    
T  32505648 tattttctctc 32505638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 40614004 - 40613892
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||||||| |||||| | |||||||||||||||||||||||| |||||| ||||| || | ||| ||||||||| |||| |||||||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactt 40613905  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  40613904 tctcttttctctc 40613892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 27864702 - 27864808
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||||||  | |||||||||||||||||| ||||| |||||| ||||| ||| |||||||||||||| | || |||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  381 tctcttt 387  Q
    |||||||    
T  27864802 tctcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 20700815 - 20700925
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||  | ||||||||||||||||| || ||| |||||| ||||| |||||||||||||||||| | || |||||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  20700915 tctttcctctc 20700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 38273242 - 38273132
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||||||  ||||||| |||||||||||||| ||||||||| |||||| ||||| |||| ||| ||||||||| || | |||||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  38273142 tcttttctctc 38273132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 4060684 - 4060795
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||| |  ||||||||| ||||||| ||||| |||||| ||||| ||||| ||||||| |||| | || ||||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T
Q  382 ctcttttctctc 393  Q
    || |||||||||    
T  4060784 cttttttctctc 4060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 38882913 - 38882802
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtgga---ccccgtacaaacacact 379  Q
    |||||||||||||||||||||||||| | |||||| ||||||||||| ||||| |||||| ||||| |||||||||||||   ||||| |||| | ||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcact 38882815  T
Q  380 ttctcttttctct 392  Q
    |||||||||||||    
T  38882814 ttctcttttctct 38882802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 42257193 - 42257303
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| | |||| | |||||||| | |||||||||||||||||||| ||||| || | ||| ||||||||| |||| |||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  42257293 tcttttctctc 42257303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 26891604 - 26891495
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||| ||||||||| | ||||||||||| | |||||||||| |||||| |||||||| |||||||||||| || |||| |||| ||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  383 tcttttctct 392  Q
    ||||| ||||    
T  26891504 tctttcctct 26891495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 41575138 - 41575242
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggacccc-gtacaaacacactttc 382  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||  |||| ||||||||||||||| |||| |||||||||   |||| |||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  383 tcttt 387  Q
    |||||    
T  41575238 tcttt 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 36168836 - 36168946
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| ||||||||  ||||||| ||||| || |||||| |||||||||||| || | ||| ||||||||| |||| || ||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  36168936 tcttttctctc 36168946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 17820105 - 17820000
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| |  ||| | ||||||||||| |||||||||||| |||||| |||||||| || |||||||||||  ||||||||| |||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacatttt 17820006  T
Q  382 ctcttt 387  Q
    ||||||    
T  17820005 ctcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 33436211 - 33436276
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgaca 33436276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 43490119 - 43490225
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||| |||||||||| |  |||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  381 tctcttt 387  Q
    | |||||    
T  43490219 tatcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 393
Target Start/End: Original strand, 3439985 - 3440089
Alignment:
Q  289 tgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctttt 388  Q
    |||||| ||||||||||||| | ||||||||| | | |||||||||| |||||| | ||||||  | |||||||||||| |||| |||| |||||||||     
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  389 ctctc 393  Q
    |||||    
T  3440085 ctctc 3440089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 38732354 - 38732458
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||  |  ||||||| || |||||||||||| |||||| |||||||| ||||  ||||||||| ||||  ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  383 tcttt 387  Q
    |||||    
T  38732454 tcttt 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 2533124 - 2533233
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||  | |||||||| ||||||||| ||||| |||||| ||||| |||| ||| | ||||||| |||| ||||||||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  383 tcttttctctc 393  Q
    |||||| ||||    
T  2533223 tcttttatctc 2533233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 387
Target Start/End: Complemental strand, 2997569 - 2997483
Alignment:
Q  301 acccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 13365369 - 13365457
Alignment:
Q  299 acacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||||||| |||||| |||| |||||||||||| |||||| ||||||||   ||  ||||||||| ||||  |||||||||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 45097835 - 45097731
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||| | |||||||| || |||||||||| | |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  383 tcttt 387  Q
    |||||    
T  45097735 tcttt 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 5e-41; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 280 - 393
Target Start/End: Original strand, 53982008 - 53982121
Alignment:
Q  280 tatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 379  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||    
T  53982008 tatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 53982107  T
Q  380 ttctcttttctctc 393  Q
    ||||||||||||||    
T  53982108 ttctcttttctctc 53982121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 52629305 - 52629410
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T
Q  388 tctctc 393  Q
    ||||||    
T  52629405 tctctc 52629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 33644199 - 33644310
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  33644299 ctcttttctctc 33644310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 49607414 - 49607524
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||  |||| |||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  49607514 tcttttctctc 49607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 54868995 - 54868885
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||||| |||| |||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  54868895 tcttttctctc 54868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 11095453 - 11095346
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||  |||||| | ||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttc 11095356  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  11095355 tcttttctct 11095346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 31456690 - 31456799
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    ||||||||||||||||||||| |||   |||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| ||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  384 cttttctctc 393  Q
    ||||||||||    
T  31456790 cttttctctc 31456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 287 - 394
Target Start/End: Complemental strand, 48587187 - 48587080
Alignment:
Q  287 aatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctt 386  Q
    ||||||||||||| |||||||| | |||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| ||||  ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  387 ttctctct 394  Q
    ||||||||    
T  48587087 ttctctct 48587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 8076393 - 8076503
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| |||||||||| | ||| |||||||||||||||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  8076493 tctttcctctc 8076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 17470405 - 17470515
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||||| |||| | |||||||||| ||| ||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  17470505 tcttttctctc 17470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 24700054 - 24699944
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||||| || || || | ||||||||||| ||||||||||||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  24699954 tctttcctctc 24699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 33118951 - 33118841
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||  | ||||||||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  33118851 tctttcctctc 33118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 27714991 - 27714882
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||||| |||| | | |||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| |||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  383 tcttttctct 392  Q
    |||| |||||    
T  27714891 tcttctctct 27714882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 279 - 393
Target Start/End: Complemental strand, 26141636 - 26141522
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 378  Q
    |||||||| |||||||||||||| |||||| | |||||||||||||| ||||||||| |||||| ||||| || ||||| ||||||||  |||| |||||    
T  26141636 ttatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacac 26141537  T
Q  379 tttctcttttctctc 393  Q
    |||||||||||||||    
T  26141536 tttctcttttctctc 26141522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 9562999 - 9563109
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| ||||| ||||||  ||||||| ||||||||| ||| |||||||| ||||| ||||||||||||| || | ||||||||||||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttc 9563098  T
Q  383 tcttttctctc 393  Q
    ||| |||||||    
T  9563099 tctcttctctc 9563109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 41189864 - 41189754
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||| | |||||||| | |||||||||||||||||||||||||| || | ||| ||||||||| |||| |||||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  41189764 tcttttctctc 41189754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 14623939 - 14623835
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||||||| ||||||||  ||| ||||||| |  |||| |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  383 tcttt 387  Q
    |||||    
T  14623839 tcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 26754700 - 26754805
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    ||||| ||||||||||||||| | ||||||||||||| |||| ||||| |||||| |||||||| ||||| ||||||||| |||| |||| |||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 26754799  T
Q  388 tctctc 393  Q
     |||||    
T  26754800 cctctc 26754805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 20765016 - 20764905
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||| ||||||||| |||||| | | ||||||| |||| ||||||||| |||||| ||||| || | ||| |||||||||||||| ||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  20764916 ctcttttctctc 20764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 30801834 - 30801723
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    |||| |||||||||||||||||||||| |   |||||||||||||| ||||||| |||||| |||||||||||||  ||||||||  |||| |||| |||    
T  30801834 tgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacatttt 30801735  T
Q  382 ctcttttctctc 393  Q
    |||||| |||||    
T  30801734 ctctttcctctc 30801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 51419460 - 51419350
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| ||||||||  ||||||| ||||| ||||||||| |||||| ||||| || | ||| | ||||||| |||| |||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  51419360 tcttttctctc 51419350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 364
Target Start/End: Original strand, 35536626 - 35536707
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggacc 364  Q
    ||||||||||||||||||| |||||  | |||||||||| |||||||||||||||||||| ||||| || |||| |||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggacc 35536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 36707524 - 36707418
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||| |||||||| |  ||||||||||||||||| ||||| |||||| ||||| ||||| ||||||| ||||      |||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccg----cgcacactttc 36707429  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  36707428 tcttttctctc 36707418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 13898154 - 13898051
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    |||||||||| ||| ||| |||||| | ||||||||||| ||||||||||||||||||| ||||| ||  ||| ||||||| |  |||| ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  384 cttt 387  Q
    ||||    
T  13898054 cttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 11348022 - 11347912
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| |  ||||||| ||||||||| ||||| |||||| ||||| || | ||| ||||||| | | || |||||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  11347922 tcttttctctc 11347912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 11907371 - 11907481
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||||||||||||| |  |||||||| | |  |||| |||| |||||| |||||||| ||||  ||||||||| |||| |||| ||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  11907471 tcttttctctc 11907481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 365
Target Start/End: Original strand, 41080709 - 41080790
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccc 365  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||||||  |||||| ||| |||| |||| ||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc 41080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 47531865 - 47531975
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||||| |||||||||| ||| ||| ||||| || ||| ||||| || | ||  || |||||| |||| |||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  47531965 tcttttctctc 47531975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 8956762 - 8956827
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    ||||||||||||||||||| |||||  | |||||||| |||||||||||||||||||||| |||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgaca 8956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 45058653 - 45058585
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    ||||| |||||||||| |||||||||| | ||||||||||| ||||||||||||||||||| ||||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgt 45058585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 42823116 - 42823215
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||||| ||||| |||  | | ||||||||| |||||||||||| ||||||||||||||| ||||  ||||||||| | ||  | |||||||||||    
T  42823116 atgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctcttt 42823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 36331478 - 36331410
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    |||| |||||||||| |||||||||||| ||||| ||||| |||||| ||||| |||||| || |||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgt 36331410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 1758558 - 1758452
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccct--ttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||| ||||||||||| || || ||| | |||||||||||   |||||||||||| |||||| |||||| | || |||||||| ||  ||||||||| ||    
T  1758558 gagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattt 1758459  T
Q  381 tctcttt 387  Q
    |||||||    
T  1758458 tctcttt 1758452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 312 - 387
Target Start/End: Complemental strand, 36331400 - 36331325
Alignment:
Q  312 gcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    ||||| ||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  36331400 gcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 393
Target Start/End: Original strand, 39670019 - 39670121
Alignment:
Q  291 atacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttct 390  Q
    ||||||||||| |||||  | |||||| | || |||||| | | |||||||||||||| ||  ||| ||||||| ||||||  ||||||| |||||||||    
T  39670019 atacatagacatccttatgtggcaatatatcccttgacatctatataaaaatttgacacgtgatcatgtggacctcgtacacgcacacttcctcttttct 39670118  T
Q  391 ctc 393  Q
    |||    
T  39670119 ctc 39670121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 48375806 - 48375696
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||| ||||||||||||||| |  |||||||||| |  | | ||| | |||||| |||| ||| ||||| ||||||||| |||| |||| ||||    
T  48375806 gagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttc 48375707  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  48375706 tctttcctctc 48375696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 35965874 - 35965809
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    ||||||||||||||| ||| |||||  |   |||||| |||||||||||||||||||||| |||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgaca 35965809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 386
Target Start/End: Original strand, 35093592 - 35093688
Alignment:
Q  290 gatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctt 386  Q
    |||||||||||| | |||| |  ||||||| | ||||||| ||||  |||||| |||||||| |||| ||| || || ||||| |||||||||||||    
T  35093592 gatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactttctctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 3e-39; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 279 - 393
Target Start/End: Complemental strand, 34012400 - 34012286
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 378  Q
    |||||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||| |||||    
T  34012400 ttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacac 34012301  T
Q  379 tttctcttttctctc 393  Q
    |||||||||||||||    
T  34012300 tttctcttttctctc 34012286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 15197331 - 15197443
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  15197431 tctcttttctctc 15197443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 12831047 - 12831157
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  12831147 tcttttctctc 12831157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 504223 - 504111
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| |    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacat 504124  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  504123 tctcttttctctc 504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 14547922 - 14548032
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||| ||||||||||||||||||| | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 14548021  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  14548022 tcttttctctc 14548032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 280 - 393
Target Start/End: Complemental strand, 23122700 - 23122587
Alignment:
Q  280 tatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 379  Q
    ||||||||||||||||||||||||||||  | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| | || ||||||    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T
Q  380 ttctcttttctctc 393  Q
    ||||||||||||||    
T  23122600 ttctcttttctctc 23122587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 40424044 - 40423933
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||| ||||| |||||| ||||| ||||||| |||||||||| |||| ||||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  40423944 ctcttttctctc 40423933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 44507187 - 44507077
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | | ||||||| |||| ||||||||| |||||| ||||| ||||||||||||||||||||||| || ||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  44507087 tcttttctctc 44507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 1180040 - 1179930
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||| ||||| ||||||| |||||  ||| |||| |||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  1179940 tcttttctctc 1179930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 5957831 - 5957940
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    ||||||||||||||||||  ||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| ||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  384 cttttctctc 393  Q
    |||| |||||    
T  5957931 ctttcctctc 5957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 10284731 - 10284627
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||||||||||||  |  |||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  383 tcttt 387  Q
    |||||    
T  10284631 tcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 37038479 - 37038589
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| | |||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  383 tcttttctctc 393  Q
    | ||| |||||    
T  37038579 tatttcctctc 37038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 43414683 - 43414571
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||||||| |||||||| |||| ||||||||||||||||||| |||||| | ||| || ||||| |||| |||| |||| |||||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactt 43414584  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  43414583 tctcttttctctc 43414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 4854963 - 4854853
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| | |||||||||||||| ||||| |||||||||| ||| |||| | ||| ||||||| | |||| |||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  4854863 tcttttctctc 4854853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 388
Target Start/End: Complemental strand, 15048282 - 15048177
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| |||||| | |||||||||||||||||| ||||| |||||| ||||| |||| ||| ||||||||| |||| ||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  382 ctctttt 388  Q
    |||||||    
T  15048183 ctctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 10621182 - 10621077
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||||||||| |||||| | | |||||||||||||||||||||| |||||| ||||| |||| ||| | || |||| |||| ||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T
Q  388 tctctc 393  Q
    ||||||    
T  10621082 tctctc 10621077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 302 - 393
Target Start/End: Complemental strand, 8841513 - 8841422
Alignment:
Q  302 cccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 393  Q
    ||||||| | ||| |||||||||||||||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||||||| |||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctc 8841422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 15259029 - 15258919
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||| || ||||||| |||||||| || | |||| |||||||||||| |||||||| ||||||||||||| | |||| |||| ||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  15258929 tctttcctctc 15258919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 348
Target Start/End: Complemental strand, 20075038 - 20074969
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    ||||||||||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||| |||||    
T  20075038 ttatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgaca 20074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 16383377 - 16383481
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  383 tcttt 387  Q
    |||||    
T  16383477 tcttt 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 9122229 - 9122295
Alignment:
Q  327 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 393  Q
    ||||||||| |||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctc 9122295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 351
Target Start/End: Complemental strand, 30479574 - 30479506
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    |||| |||||||||| |||||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgt 30479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 34307216 - 34307320
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  || |||||| ||||  ||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  383 tcttt 387  Q
    |||||    
T  34307316 tcttt 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 17443825 - 17443929
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| |  ||||||||   || |||| |||| |||||| ||||||||||||| |||||||||  ||||| ||||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  383 tcttt 387  Q
    |||||    
T  17443925 tcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 24307893 - 24307789
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | |||||||| || |||||||||||| |||||| ||| |||| | ||  ||||||||| ||||  ||||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  383 tcttt 387  Q
    |||||    
T  24307793 tcttt 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 366
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggacccc 366  Q
    |||| ||||||||| ||||||||||| |  |||||||| | |||||| ||||| |||||| | |||||||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 42221515 - 42221619
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||| ||| |||||| |  |||||||  | | |||||||||| |||||| ||||| ||| |||  |||||||| ||||| |||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  383 tcttt 387  Q
    |||||    
T  42221615 tcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 16056501 - 16056397
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||  |  ||||||| || |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  383 tcttt 387  Q
    |||||    
T  16056401 tcttt 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 351
Target Start/End: Original strand, 24307629 - 24307697
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 351  Q
    |||| |||||||||| |||||||||| | |||||||| || |||||||||||| |||||| ||| ||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgt 24307697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 392
Target Start/End: Original strand, 38229470 - 38229537
Alignment:
Q  325 tgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctct 392  Q
    ||||||||||| |||||| |||||||| ||||||||||  | |||||| |||| ||||||||| ||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctctttcctct 38229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 8080483 - 8080373
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||| |||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  8080383 tcttttctctc 8080373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 35137531 - 35137643
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||||||||||| |||||| | ||| |||||||||||||||||| ||||||||||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  35137631 tctcttttctctc 35137643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 4999614 - 4999504
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||| ||| | |||||||||||||||||| ||||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  383 tcttttctctc 393  Q
    |||||| ||||    
T  4999514 tcttttatctc 4999504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 7389389 - 7389499
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  7389489 tcttttctctc 7389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 38267039 - 38267150
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  38267139 ctcttttctctc 38267150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 36362013 - 36361904
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  36361913 tcttttctct 36361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 19329840 - 19329952
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||||||||||| |||||| | |||||||||| ||||||||||||| |||||| ||||| ||| |||||||||||||| |||| |||||||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 19329939  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  19329940 tctcttttctctc 19329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 394
Target Start/End: Original strand, 3434562 - 3434673
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||||||| |||||  ||||| ||||||||||||| |||| |||| |||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  383 tcttttctctct 394  Q
    ||||||||||||    
T  3434662 tcttttctctct 3434673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 38837217 - 38837327
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  38837317 tcttttctctc 38837327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 40957707 - 40957817
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||| ||||| | ||||||||| |||||| ||||||| |||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  40957807 tcttttctctc 40957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 36362026 - 36362135
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | | |||||| ||||||||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  36362126 tcttttctct 36362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 393
Target Start/End: Original strand, 3783998 - 3784105
Alignment:
Q  286 taatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 385  Q
    ||||||||||||||||||||||| | |||||||| | ||||||||||||| |||||| ||||| ||||||||||||| |||| |||| ||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  386 tttctctc 393  Q
    ||||||||    
T  3784098 tttctctc 3784105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 19436287 - 19436178
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||| |  ||||||||| ||||||||||||| |||||| ||||| ||||||||||||| |||| | || |||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  19436187 tcttttctct 19436178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 32951592 - 32951483
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    ||||||||||||||||||| |||||||  ||||||| ||||| ||| ||||| |||||| | ||| |||||||||||||||||| |||| ||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  384 cttttctctc 393  Q
    ||||||||||    
T  32951492 cttttctctc 32951483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 281 - 387
Target Start/End: Original strand, 8238210 - 8238317
Alignment:
Q  281 atgagtaatgatacatagacaccct-tagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 379  Q
    |||||| |||||||||| ||||||| ||| | |||||||||||||||||||||||| |||||| |||||||||||||  ||||||||| ||||  |||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  380 ttctcttt 387  Q
    ||||||||    
T  8238310 ttctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 3694365 - 3694477
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||| |||||||| ||| |||||||||| |  ||||||||| ||| ||||||||| |||||| ||||| ||||||| ||||| |||| |||| |||||||    
T  3694365 atgaataatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactt 3694464  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  3694465 tctcttttctctc 3694477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 35468955 - 35468851
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||| | | ||||   || |||||||| | ||||||||||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttc 35468856  T
Q  383 tcttt 387  Q
    |||||    
T  35468855 tcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 386
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||| |||||||||||||| |||||| |  |||||||||||||||||| |||| |||||||||||| |||| ||| || |||||| |||| |||| ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  381 tctctt 386  Q
    ||||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 38044197 - 38044301
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||| ||||| |||||| |||||||||| ||  ||||||||| ||||  ||||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  383 tcttt 387  Q
    |||||    
T  38044297 tcttt 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 36208173 - 36208283
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| ||||||||||||||||||||| | | ||||||  | |||||||||||| |||||  |||||||| ||||||||||||| | |||| |||| ||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  36208273 tctttcctctc 36208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 401
Target Start/End: Original strand, 35522881 - 35522994
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||||||||| |||||  | |||||||||| ||| ||||||||| |||||| ||||| || | ||  |||| |||| |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T
Q  388 tctctctgcttctc 401  Q
    ||||||| ||||||    
T  35522981 tctctcttcttctc 35522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 22343361 - 22343465
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| ||||||||   ||  ||||||||| ||||  ||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  383 tcttt 387  Q
    |||||    
T  22343461 tcttt 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 40846213 - 40846109
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| ||| |||||| | ||||||||||| |||||| ||||| |||||| | ||||||||| |  ||||||||| ||||| ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  383 tcttt 387  Q
    |||||    
T  40846113 tcttt 40846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 41915741 - 41915845
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||| ||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  383 tcttt 387  Q
    |||||    
T  41915841 tcttt 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 46033901 - 46033791
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||| |  ||||| | |||||||||||||| |||||||||||||||| ||||| || ||||| || || ||| |||| || | ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  46033801 tcttttctctc 46033791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 32564527 - 32564422
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||| |||  ||||| | ||||||||||| |||||||||||| |||||| |||||||| |  |  ||||||||| ||||| |||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  382 ctcttt 387  Q
    ||||||    
T  32564427 ctcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 11044188 - 11044288
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||||           ||||| |||||||||||||||||| ||||  ||||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacactttc 11044277  T
Q  383 tcttttctctc 393  Q
    ||||| |||||    
T  11044278 tctttcctctc 11044288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 377
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacaca 377  Q
    |||| |||||||||||||| |||||| | |||| ||||||||| ||||||||| |||||| ||||| || | ||| ||||||||| |||| ||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 41423681 - 41423786
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| | |||||| | ||||||||  |||||||  ||| |||||| |||||||| ||||||| || ||||||||| || | |||    
T  41423681 tgagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatatttt 41423780  T
Q  382 ctcttt 387  Q
    ||||||    
T  41423781 ctcttt 41423786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 7727906 - 7728006
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | | ||||||||  ||||||  ||||||||||| |||||||| ||||  ||||||||| ||||  ||||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  383 t 383  Q
    |    
T  7728006 t 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 26296644 - 26296754
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| |  ||||| ||||||| ||| |||||||||||| ||| | || | ||  ||||||||| |||| | || ||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttc 26296743  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  26296744 tcttttctctc 26296754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 10343663 - 10343598
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 348  Q
    |||||||||||||||||||||||||| | | |||||||   |||||||||||| |||||| |||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 18207180 - 18207283
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| | ||||||||||  |||||||||| | |||||| | ||| || | |||||| |||||  |||| |||||||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacactttc 18207278  T
Q  383 tcttt 387  Q
    |||||    
T  18207279 tcttt 18207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 31735882 - 31735936
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccaca 335  Q
    |||||| |||||||||||||| |||||| | ||||||||| |||| |||||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccaca 31735936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 39256024 - 39255920
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||||||| |||||| | ||||||||||  |||| ||||| | |||||| ||||| || | ||||||||| ||  ||||  |||||||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacacttt 39255926  T
Q  382 ctcttt 387  Q
    ||||||    
T  39255925 ctcttt 39255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 279 - 393
Target Start/End: Original strand, 32869674 - 32869788
Alignment:
Q  279 ttatgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 378  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||    
T  32869674 ttatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 32869773  T
Q  379 tttctcttttctctc 393  Q
    |||||||||||||||    
T  32869774 tttctcttttctctc 32869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 286 - 393
Target Start/End: Complemental strand, 22880755 - 22880648
Alignment:
Q  286 taatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 385  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||| |||| | ||||| |||||||||||||||||| |||| ||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  386 tttctctc 393  Q
    ||||||||    
T  22880655 tttctctc 22880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 281 - 393
Target Start/End: Original strand, 17598552 - 17598664
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||||||| | |||||||| | ||||||||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  17598652 tctcttttctctc 17598664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 11427616 - 11427728
Alignment:
Q  283 gagtaatgatacatagacaccct--tagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    |||||||||||||||||||||||  ||| | |||||||| ||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  381 tctcttttctctc 393  Q
    |||||||||||||    
T  11427716 tctcttttctctc 11427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 6209565 - 6209455
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||||||||||||||||||||||||| | |||||||||  |||||||| |||| |||||| || || |||||||||||||||||| || | |||||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  6209465 tcttttctctc 6209455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 29857827 - 29857936
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||||| |||||| |||||||||| ||| ||||||||| |||||| ||||| ||||| ||||||| |||| | || |||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  29857927 tcttttctct 29857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 282 - 393
Target Start/End: Complemental strand, 31109501 - 31109390
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    |||||||||||  |||||||||||||| | |||||||||||||||||| ||||| |||||| ||||| |||||||||| ||||||| | ||  |||||||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacacttt 31109402  T
Q  382 ctcttttctctc 393  Q
    ||||||||||||    
T  31109401 ctcttttctctc 31109390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 31953132 - 31953026
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||||||||| ||||||||  ||| ||||||| |  ||||||||||||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactt 31953033  T
Q  381 tctcttt 387  Q
    |||||||    
T  31953032 tctcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 31976248 - 31976358
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| | |||||| ||||||| ||||||||| |||||| ||||| || ||||| || |||||| |||| |||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  31976348 tcttttctctc 31976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 15832577 - 15832687
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||||| |||| |  ||||| | | ||||||||||||| |||||||||||| ||||||||||||| || | ||||| ||| ||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttc 15832676  T
Q  383 tcttttctctc 393  Q
    |||||| ||||    
T  15832677 tcttttttctc 15832687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 15508125 - 15508020
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  382 ctcttt 387  Q
    ||||||    
T  15508025 ctcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 15990142 - 15990038
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  383 tcttt 387  Q
    |||||    
T  15990042 tcttt 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 30341460 - 30341356
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||| |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  383 tcttt 387  Q
    |||||    
T  30341360 tcttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 393
Target Start/End: Complemental strand, 23128196 - 23128117
Alignment:
Q  314 aatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 393  Q
    |||||| ||||||||||||||| |||||| ||||| ||||||||||||| |||  |||| ||||||||||||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctc 23128117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 392
Target Start/End: Complemental strand, 31110859 - 31110752
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||| |||||| | ||||||||||||||||||| |||  |||||| ||||| |||  ||| ||||||| | |||| |||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  31110761 tcttttctct 31110752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 388
Target Start/End: Complemental strand, 28536582 - 28536483
Alignment:
Q  287 aatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctt 386  Q
    ||||||||||| ||| |||||| | |||||||| || |||||||||||| |||||| ||||| |  |||| |||||||||  |||| |||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 387
Target Start/End: Complemental strand, 9379807 - 9379708
Alignment:
Q  288 atgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||||||||| ||||||||  ||||||| || |||||||||| | |||||||||||| || | || ||||| | |  ||||||||| |||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 946377 - 946486
Alignment:
Q  284 agtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 383  Q
    ||||| |||||||||||| |||||| |   |||||||||||||||||| ||  |||||| |||||  |||||||||  | ||||  | | ||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttct 946476  T
Q  384 cttttctctc 393  Q
    ||||||||||    
T  946477 cttttctctc 946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 4231547 - 4231652
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| ||||| |||| ||| | |||| | ||||||||||| ||| |||||||| |||||| ||||| || | ||  ||||||||| ||||  |||||||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  382 ctcttt 387  Q
    ||||||    
T  4231647 ctcttt 4231652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 393
Target Start/End: Complemental strand, 10209 - 10099
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    |||| |||||||||||||||| |||| | |||||||| ||||||||| |||||||||||| ||||| ||||||||||||||| ||||||| |||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttc 10110  T
Q  383 tcttttctctc 393  Q
    |||||||||||    
T  10109 tcttttctctc 10099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 392
Target Start/End: Original strand, 4029 - 4138
Alignment:
Q  283 gagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 382  Q
    ||||||||||||||||||||| |||||| |||||||||| ||| ||||||||| |||||| ||||| ||||| ||||||| |||| | || |||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  383 tcttttctct 392  Q
    ||||||||||    
T  4129 tcttttctct 4138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 1031 - 919
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||||||||||| | |||| | |||||||||||||| ||| ||||| |||||  ||||| ||||||||||| | |||| |||| |||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  381 tctcttttctctc 393  Q
    ||||||| |||||    
T  931 tctctttcctctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 281 - 393
Target Start/End: Complemental strand, 1031 - 919
Alignment:
Q  281 atgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 380  Q
    ||||||||||||||||||||| | |||| | |||||||||||||| ||| ||||| |||||  ||||| ||||||||||| | |||| |||| |||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  381 tctcttttctctc 393  Q
    ||||||| |||||    
T  931 tctctttcctctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 299 - 387
Target Start/End: Original strand, 152514 - 152602
Alignment:
Q  299 acacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 387  Q
    |||||||| | | ||||||||||| |||||||||||| |||||| |||||||| ||||  |||| |||| ||||| |||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 8964 - 8859
Alignment:
Q  282 tgagtaatgatacatagacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 381  Q
    ||||| |||||| ||||||| |||||  |  ||||||||  ||||||| | ||| ||||||||||||  ||||||||||||||||  ||||  ||| |||    
T  8964 tgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacatttt 8865  T
Q  382 ctcttt 387  Q
    ||||||    
T  8864 ctcttt 8859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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