View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11825_low_37 (Length: 241)
Name: NF11825_low_37
Description: NF11825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11825_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 16691697 - 16691916
Alignment:
| Q |
1 |
actttcatacagtaaaagtaaagagtatattgtggataatgaagaagaacaaagaaagataagaaattgtattttcatcttaaatgttaaaatattatta |
100 |
Q |
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| T |
16691697 |
actttcatacagtaaaagtaaagagtatattgtggataatgaagaagaacaaagaaagataagaaattgtattttcatcttaaatgttaaaatattatta |
16691796 |
T |
|
| Q |
101 |
tattctgcaatttggatcaaatcactagatgttccaccttatcttattactctacatgt-aaatcaaactatgccatcataacattaaatttttcttttg |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |
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| T |
16691797 |
tattctgcaatttggatcaaatcactagatgttccaccttatcttattactctacatgtaaaatcaaactatgccatcataacatt-aatttttcttttg |
16691895 |
T |
|
| Q |
200 |
ccaattttccaaatattcttc |
220 |
Q |
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||||||||||||||||||||| |
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| T |
16691896 |
ccaattttccaaatattcttc |
16691916 |
T |
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