View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11826_high_28 (Length: 353)
Name: NF11826_high_28
Description: NF11826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11826_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 38972751 - 38972431
Alignment:
| Q |
13 |
atataaactatttcaatgagacatcacactttcactatcattgattataattattcaagtgggtggatcatattagctagttgatatttcagtgccactt |
112 |
Q |
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| T |
38972751 |
atataaactatttcaatgagacatcacactttcactatcattgattataattattcaagtgggtggatcatactagctagttgatatttcactgccactt |
38972652 |
T |
|
| Q |
113 |
gaatgatatggttcaggtcttcattagcttaatca-aagtttgtgaattccaaattcatgtcctaaaaatacaataacattaaaactcttgatgagattt |
211 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
38972651 |
gaatgatatggttcaggtcttcattagcttaatcacaagtttgtgaattccaaattcatgtcctaaaaatacaataacattaaaactcttgatgaga-tt |
38972553 |
T |
|
| Q |
212 |
tgttgcctattattgcttatctcctttattggatttgagagattaatctatacaattgatgatagatttacctcacaaataaatactagtagttgatata |
311 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
38972552 |
tgttgcctattattgcttatctcctttatcggatttgagagattaatctat----ttgatgatagatttacctcaaaaataaatactagtagttgatata |
38972457 |
T |
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| Q |
312 |
ggaattgtggtgtctttattattata |
337 |
Q |
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|||||||||||||||||||||||||| |
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| T |
38972456 |
ggaattgtggtgtctttattattata |
38972431 |
T |
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