View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11826_high_35 (Length: 307)
Name: NF11826_high_35
Description: NF11826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11826_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 30279867 - 30280145
Alignment:
| Q |
19 |
ctatgggtgtggatcttgtggttcaagcttcagttgttcaagctattatatggctcactttgcttctatttgtgttggagtttagaagaacgggaataga |
118 |
Q |
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| T |
30279867 |
ctatgggtgtggatcttgtggttcaagcttcagttgttcaagctattatatggctcactttgcttctatttgtgttggagtttagaagaacgggaataga |
30279966 |
T |
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| Q |
119 |
ggggactataaccactttgaaaccgaaggctagtagcattagtaatgtgacatgtgaaggtgaagaaagtaaagatgttgaagcaaataacatagtagaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30279967 |
ggggactataaccactttgaaaccgaaggctagtagcattagtaatgtgacatgtgaaggtgaagaaagtaaagatgttgaagcaaataacatagtagaa |
30280066 |
T |
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| Q |
219 |
tatacaagtagtaggcttcctttcttccaattgatgaagcgtgtgtggctcaaacttatagctaatccaaattcctatg |
297 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
30280067 |
tatacaagtagtaggcttcctttcttacaattgatgaagcgtgtgtggctcaaacttatagcaaatccaaattcctatg |
30280145 |
T |
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