View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11826_high_41 (Length: 290)
Name: NF11826_high_41
Description: NF11826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11826_high_41 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 19 - 276
Target Start/End: Complemental strand, 30889233 - 30888973
Alignment:
| Q |
19 |
taatatgtgacaattttcactagatatagttcttaatcttatgttttggatataagaagtttcaattttcactagatatagttctcatttgtgttctata |
118 |
Q |
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| T |
30889233 |
taatatgttacaattttcactagatatagttcttaatcttatgttttggatataagaagtttcaattttcactagatatagttctcatttgtgttctata |
30889134 |
T |
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| Q |
119 |
gtgtattccgtggcatagaatattgggaaaagatgaactagaagctcttatttcatgtgaaaagat---tgaggctcggtttggtttggagatattagat |
215 |
Q |
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| T |
30889133 |
gtgtattccgtggcatagaagattgggaaaagatggactagaagctcttatttcatgtgaaaagattgatgaggctcggtttggtttggagatattagat |
30889034 |
T |
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| Q |
216 |
ttgtgaagttcgtaattgaaggtaaaaggagttgaagaaagataattcatatgttgttcat |
276 |
Q |
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| T |
30889033 |
ttgcgaagttcgtaattgaaggtaaaaggagttgaagaaagataattcatatgttgttcat |
30888973 |
T |
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