View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11826_low_39 (Length: 294)

Name: NF11826_low_39
Description: NF11826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11826_low_39
NF11826_low_39
[»] chr7 (52 HSPs)
chr7 (13-278)||(21278866-21279134)
chr7 (13-278)||(26015663-26015931)
chr7 (13-278)||(25876791-25877059)
chr7 (13-278)||(43246754-43247022)
chr7 (13-278)||(46321843-46322111)
chr7 (13-278)||(47065737-47066005)
chr7 (13-275)||(47779305-47779571)
chr7 (13-275)||(7900451-7900716)
chr7 (13-278)||(40995202-40995470)
chr7 (13-278)||(32541980-32542248)
chr7 (13-278)||(8203238-8203506)
chr7 (13-278)||(8215715-8215983)
chr7 (13-278)||(46923893-46924160)
chr7 (13-278)||(34591691-34591959)
chr7 (13-278)||(40705310-40705577)
chr7 (13-275)||(27324973-27325238)
chr7 (36-278)||(38875874-38876119)
chr7 (39-278)||(38283414-38283656)
chr7 (13-278)||(7790918-7791187)
chr7 (13-274)||(40994610-40994874)
chr7 (13-278)||(32662186-32662433)
chr7 (205-278)||(35924245-35924316)
chr7 (13-83)||(35924318-35924388)
chr7 (181-275)||(43775901-43775993)
chr7 (181-270)||(39597843-39597930)
chr7 (165-263)||(45870127-45870223)
chr7 (165-270)||(20492707-20492809)
chr7 (181-270)||(24980878-24980965)
chr7 (181-270)||(40862382-40862469)
chr7 (165-270)||(42436462-42436565)
chr7 (219-278)||(42095782-42095839)
chr7 (164-236)||(19021015-19021087)
chr7 (219-278)||(39074364-39074421)
chr7 (219-278)||(43047094-43047151)
chr7 (181-270)||(12847148-12847235)
chr7 (165-270)||(7883634-7883737)
chr7 (165-263)||(40305431-40305527)
chr7 (181-270)||(10594107-10594194)
chr7 (29-95)||(25765044-25765110)
chr7 (165-270)||(29042167-29042269)
chr7 (165-270)||(36688694-36688796)
chr7 (15-93)||(48642094-48642172)
chr7 (219-275)||(21874639-21874693)
chr7 (181-270)||(241705-241791)
chr7 (181-227)||(46101868-46101914)
chr7 (165-228)||(47540353-47540417)
chr7 (165-228)||(47546910-47546974)
chr7 (165-251)||(12428641-12428725)
chr7 (165-277)||(30173420-30173530)
chr7 (165-263)||(48641965-48642060)
chr7 (184-277)||(44709873-44709964)
chr7 (181-227)||(48874357-48874403)
[»] chr6 (24 HSPs)
chr6 (13-278)||(29630298-29630565)
chr6 (13-278)||(3094603-3094871)
chr6 (13-278)||(18893690-18893958)
chr6 (13-278)||(6625373-6625641)
chr6 (13-278)||(29122155-29122423)
chr6 (13-278)||(7141278-7141546)
chr6 (26-278)||(6167750-6168005)
chr6 (77-278)||(25335003-25335207)
chr6 (102-278)||(13889849-13890027)
chr6 (165-263)||(8811261-8811357)
chr6 (165-263)||(7081002-7081098)
chr6 (165-270)||(6925800-6925903)
chr6 (184-269)||(34085821-34085904)
chr6 (181-270)||(23350377-23350464)
chr6 (15-92)||(7081155-7081232)
chr6 (15-92)||(8811127-8811204)
chr6 (165-234)||(18024436-18024505)
chr6 (181-270)||(11369054-11369141)
chr6 (165-236)||(5714932-5715003)
chr6 (13-51)||(13889811-13889849)
chr6 (212-270)||(31091150-31091206)
chr6 (166-263)||(32173670-32173765)
chr6 (203-263)||(8525555-8525613)
chr6 (203-270)||(29623168-29623233)
[»] chr3 (52 HSPs)
chr3 (13-275)||(20048352-20048618)
chr3 (13-278)||(10999560-10999828)
chr3 (13-278)||(20835396-20835664)
chr3 (13-278)||(22781721-22781989)
chr3 (13-278)||(37971488-37971756)
chr3 (13-278)||(38871135-38871403)
chr3 (13-278)||(4515828-4516096)
chr3 (13-278)||(25710901-25711169)
chr3 (13-278)||(40585985-40586253)
chr3 (13-278)||(33712438-33712705)
chr3 (13-278)||(4044622-4044890)
chr3 (13-278)||(10841247-10841514)
chr3 (13-278)||(53974325-53974592)
chr3 (13-278)||(41069851-41070117)
chr3 (13-278)||(36430282-36430549)
chr3 (14-260)||(6268173-6268422)
chr3 (13-278)||(33966910-33967164)
chr3 (52-278)||(7156541-7156753)
chr3 (165-270)||(36885711-36885814)
chr3 (165-278)||(7680974-7681085)
chr3 (181-270)||(35039595-35039682)
chr3 (181-270)||(49779841-49779928)
chr3 (219-278)||(84403-84460)
chr3 (219-278)||(32236147-32236204)
chr3 (165-263)||(38145211-38145307)
chr3 (165-270)||(11123881-11123984)
chr3 (165-270)||(36232642-36232745)
chr3 (181-270)||(44354485-44354572)
chr3 (219-275)||(24395113-24395167)
chr3 (182-270)||(48584857-48584943)
chr3 (219-278)||(7679722-7679779)
chr3 (219-278)||(20657412-20657469)
chr3 (219-278)||(26090216-26090273)
chr3 (165-236)||(47098274-47098345)
chr3 (165-278)||(11095662-11095773)
chr3 (165-270)||(14279129-14279232)
chr3 (181-270)||(30418713-30418800)
chr3 (181-270)||(36841092-36841179)
chr3 (15-93)||(47098139-47098217)
chr3 (181-270)||(51662149-51662236)
chr3 (171-236)||(54556402-54556467)
chr3 (219-278)||(672082-672139)
chr3 (165-252)||(52812168-52812253)
chr3 (165-251)||(39627093-39627176)
chr3 (15-93)||(1774218-1774296)
chr3 (181-270)||(2613313-2613400)
chr3 (181-270)||(4596413-4596499)
chr3 (166-278)||(33392526-33392635)
chr3 (164-228)||(1774098-1774162)
chr3 (166-263)||(8947833-8947927)
chr3 (181-228)||(52343145-52343192)
chr3 (181-228)||(19941745-19941792)
[»] chr5 (40 HSPs)
chr5 (13-278)||(43518093-43518362)
chr5 (13-278)||(9065713-9065981)
chr5 (13-278)||(43293460-43293728)
chr5 (13-278)||(4155971-4156239)
chr5 (13-278)||(33280824-33281092)
chr5 (13-278)||(24559083-24559351)
chr5 (13-278)||(24600115-24600383)
chr5 (26-278)||(31527393-31527648)
chr5 (13-278)||(19034523-19034791)
chr5 (13-270)||(37865898-37866158)
chr5 (13-278)||(13145684-13145951)
chr5 (165-270)||(10666096-10666199)
chr5 (181-263)||(31484679-31484759)
chr5 (181-263)||(41881895-41881975)
chr5 (165-270)||(7338643-7338745)
chr5 (181-270)||(8232566-8232653)
chr5 (169-270)||(36294204-36294303)
chr5 (165-270)||(37274574-37274677)
chr5 (165-270)||(40738915-40739018)
chr5 (219-278)||(25084871-25084928)
chr5 (219-278)||(25142844-25142901)
chr5 (220-278)||(38760537-38760593)
chr5 (15-93)||(12189146-12189224)
chr5 (165-270)||(18522184-18522287)
chr5 (165-270)||(18864453-18864556)
chr5 (181-270)||(42437350-42437437)
chr5 (219-278)||(6469947-6470004)
chr5 (167-270)||(12189267-12189368)
chr5 (165-270)||(13210948-13211051)
chr5 (165-270)||(15272728-15272831)
chr5 (182-270)||(4621169-4621255)
chr5 (219-278)||(19617736-19617793)
chr5 (219-278)||(29920305-29920362)
chr5 (181-270)||(18978473-18978560)
chr5 (165-270)||(43548543-43548645)
chr5 (165-261)||(31498869-31498963)
chr5 (181-260)||(37340833-37340910)
chr5 (165-232)||(6245246-6245313)
chr5 (181-225)||(38768315-38768359)
chr5 (188-232)||(35319755-35319799)
[»] chr4 (52 HSPs)
chr4 (13-278)||(42723996-42724264)
chr4 (13-278)||(28406253-28406521)
chr4 (13-278)||(39540216-39540484)
chr4 (13-278)||(52913008-52913276)
chr4 (13-278)||(53874925-53875193)
chr4 (13-278)||(19873937-19874205)
chr4 (13-278)||(20434177-20434445)
chr4 (13-278)||(37234020-37234288)
chr4 (13-278)||(42348675-42348943)
chr4 (13-278)||(55215408-55215676)
chr4 (30-278)||(10541864-10542115)
chr4 (13-278)||(55219882-55220150)
chr4 (13-278)||(56362833-56363100)
chr4 (14-278)||(613838-614105)
chr4 (12-278)||(55183341-55183610)
chr4 (13-269)||(25857564-25857823)
chr4 (13-278)||(23895009-23895278)
chr4 (13-275)||(52839547-52839812)
chr4 (13-278)||(38291670-38291938)
chr4 (13-278)||(52307272-52307540)
chr4 (13-278)||(53035833-53036098)
chr4 (141-278)||(43830165-43830300)
chr4 (165-270)||(43458363-43458466)
chr4 (165-268)||(11682233-11682334)
chr4 (165-268)||(11690512-11690613)
chr4 (181-270)||(35339632-35339719)
chr4 (165-270)||(40430145-40430248)
chr4 (165-270)||(47467379-47467482)
chr4 (166-270)||(49298-49400)
chr4 (219-278)||(20737705-20737762)
chr4 (181-263)||(24034548-24034628)
chr4 (181-270)||(41202333-41202420)
chr4 (181-270)||(51322672-51322759)
chr4 (219-275)||(56018719-56018773)
chr4 (165-260)||(3026414-3026507)
chr4 (165-270)||(1522806-1522909)
chr4 (166-270)||(24897008-24897109)
chr4 (183-270)||(7318450-7318536)
chr4 (181-251)||(30217111-30217179)
chr4 (165-270)||(13962450-13962552)
chr4 (165-270)||(22301719-22301819)
chr4 (181-270)||(43621562-43621649)
chr4 (198-270)||(22847127-22847197)
chr4 (203-270)||(28803978-28804043)
chr4 (165-278)||(48990360-48990468)
chr4 (165-251)||(34159052-34159136)
chr4 (165-236)||(36851460-36851531)
chr4 (169-270)||(8713247-8713343)
chr4 (181-270)||(50561587-50561673)
chr4 (165-226)||(20293267-20293328)
chr4 (219-278)||(31709730-31709787)
chr4 (181-263)||(32932614-32932694)
[»] chr2 (34 HSPs)
chr2 (13-278)||(45505587-45505855)
chr2 (13-278)||(1481826-1482094)
chr2 (13-278)||(25853234-25853502)
chr2 (13-278)||(39697579-39697847)
chr2 (13-278)||(1520191-1520459)
chr2 (13-278)||(43577018-43577286)
chr2 (13-278)||(44143375-44143643)
chr2 (13-278)||(2390489-2390756)
chr2 (13-278)||(34202294-34202562)
chr2 (13-278)||(10638793-10639060)
chr2 (13-278)||(21657942-21658209)
chr2 (13-278)||(40811575-40811842)
chr2 (13-278)||(42342983-42343250)
chr2 (19-278)||(3178241-3178503)
chr2 (13-278)||(13195940-13196207)
chr2 (13-274)||(37094107-37094371)
chr2 (13-278)||(927079-927327)
chr2 (112-278)||(15011834-15012002)
chr2 (13-222)||(874953-875154)
chr2 (165-270)||(13480508-13480611)
chr2 (220-278)||(32551681-32551737)
chr2 (166-270)||(26170999-26171101)
chr2 (220-278)||(35895507-35895563)
chr2 (181-236)||(44456787-44456842)
chr2 (165-270)||(4331840-4331943)
chr2 (165-270)||(38629368-38629471)
chr2 (182-257)||(31569635-31569708)
chr2 (181-263)||(7722648-7722728)
chr2 (166-236)||(45443516-45443585)
chr2 (219-275)||(27980924-27980978)
chr2 (219-275)||(28067454-28067508)
chr2 (166-270)||(44798832-44798933)
chr2 (181-227)||(458584-458630)
chr2 (181-232)||(16313558-16313609)
[»] chr1 (49 HSPs)
chr1 (13-278)||(34270574-34270842)
chr1 (13-278)||(39569256-39569524)
chr1 (13-278)||(52044190-52044458)
chr1 (13-278)||(44721886-44722154)
chr1 (13-278)||(52024740-52025008)
chr1 (13-278)||(42948204-42948473)
chr1 (13-278)||(6653239-6653507)
chr1 (13-278)||(26150966-26151234)
chr1 (30-278)||(40400048-40400299)
chr1 (13-278)||(20581514-20581781)
chr1 (29-278)||(33010603-33010855)
chr1 (13-278)||(18909230-18909498)
chr1 (13-278)||(24317196-24317462)
chr1 (13-278)||(50727812-50728080)
chr1 (13-278)||(2482430-2482701)
chr1 (13-274)||(2138046-2138310)
chr1 (13-278)||(13942158-13942426)
chr1 (13-278)||(51677049-51677317)
chr1 (49-278)||(15932801-15933033)
chr1 (52-278)||(49823219-49823448)
chr1 (84-275)||(28852791-28852985)
chr1 (195-278)||(13240207-13240288)
chr1 (181-263)||(40498647-40498727)
chr1 (181-278)||(23444319-23444413)
chr1 (165-270)||(29922183-29922286)
chr1 (181-270)||(41712783-41712870)
chr1 (181-270)||(51002006-51002093)
chr1 (165-270)||(51776052-51776155)
chr1 (169-269)||(5672915-5673013)
chr1 (165-269)||(17605751-17605853)
chr1 (219-278)||(11173512-11173569)
chr1 (219-278)||(14247457-14247514)
chr1 (219-278)||(39982278-39982335)
chr1 (219-278)||(51290564-51290621)
chr1 (165-270)||(14290252-14290355)
chr1 (181-270)||(17474687-17474774)
chr1 (181-270)||(26307869-26307956)
chr1 (219-278)||(40536800-40536857)
chr1 (55-98)||(13240166-13240209)
chr1 (181-270)||(8114879-8114966)
chr1 (181-270)||(32086505-32086592)
chr1 (182-270)||(35273849-35273935)
chr1 (181-268)||(9640866-9640951)
chr1 (181-270)||(13146045-13146131)
chr1 (181-270)||(19247752-19247839)
chr1 (165-270)||(7009031-7009131)
chr1 (181-228)||(19514111-19514158)
chr1 (181-253)||(12601893-12601963)
chr1 (165-236)||(24527597-24527665)
[»] scaffold0391 (1 HSPs)
scaffold0391 (13-278)||(3890-4158)
[»] chr8 (49 HSPs)
chr8 (13-278)||(8376255-8376523)
chr8 (13-278)||(26122326-26122594)
chr8 (13-278)||(23357057-23357325)
chr8 (26-278)||(5988203-5988458)
chr8 (13-278)||(43664126-43664393)
chr8 (13-278)||(24822524-24822792)
chr8 (30-278)||(3137042-3137293)
chr8 (13-278)||(35605352-35605620)
chr8 (13-278)||(39365261-39365528)
chr8 (13-275)||(42512177-42512442)
chr8 (13-278)||(26290579-26290847)
chr8 (13-278)||(26303836-26304104)
chr8 (13-278)||(34564829-34565097)
chr8 (13-278)||(26337191-26337459)
chr8 (30-278)||(3032715-3032966)
chr8 (39-278)||(17122105-17122347)
chr8 (43-278)||(34917553-34917791)
chr8 (35-278)||(8656569-8656815)
chr8 (74-275)||(22439467-22439671)
chr8 (165-270)||(12722579-12722682)
chr8 (181-270)||(31793823-31793910)
chr8 (15-93)||(2828154-2828232)
chr8 (165-270)||(41942319-41942422)
chr8 (181-270)||(42687915-42688002)
chr8 (219-278)||(15839470-15839527)
chr8 (219-278)||(28885723-28885780)
chr8 (219-278)||(28909677-28909734)
chr8 (181-263)||(36057706-36057786)
chr8 (181-263)||(38168459-38168539)
chr8 (165-270)||(11266156-11266259)
chr8 (209-278)||(12713578-12713645)
chr8 (219-278)||(8013936-8013993)
chr8 (219-278)||(11587913-11587970)
chr8 (219-278)||(17601349-17601406)
chr8 (219-278)||(37577998-37578055)
chr8 (165-270)||(38945711-38945811)
chr8 (219-278)||(5599872-5599929)
chr8 (219-278)||(5640691-5640748)
chr8 (165-236)||(4005820-4005891)
chr8 (27-93)||(7969872-7969938)
chr8 (165-278)||(38234432-38234543)
chr8 (165-257)||(7969992-7970081)
chr8 (181-251)||(5552-5620)
chr8 (181-270)||(4229659-4229746)
chr8 (166-236)||(5347437-5347506)
chr8 (182-236)||(44025627-44025681)
chr8 (168-236)||(16571211-16571278)
chr8 (165-270)||(38460060-38460162)
chr8 (203-270)||(35329723-35329787)
[»] scaffold0368 (1 HSPs)
scaffold0368 (13-278)||(13877-14146)
[»] scaffold0438 (1 HSPs)
scaffold0438 (13-278)||(1916-2184)
[»] scaffold0007 (2 HSPs)
scaffold0007 (13-278)||(156917-157184)
scaffold0007 (181-270)||(200056-200143)
[»] scaffold0276 (2 HSPs)
scaffold0276 (13-278)||(13851-14118)
scaffold0276 (46-278)||(12535-12770)
[»] scaffold0248 (1 HSPs)
scaffold0248 (102-278)||(2915-3093)
[»] scaffold0896 (2 HSPs)
scaffold0896 (165-263)||(3708-3804)
scaffold0896 (15-92)||(3575-3651)
[»] scaffold0065 (1 HSPs)
scaffold0065 (219-278)||(38424-38481)
[»] scaffold0003 (1 HSPs)
scaffold0003 (165-228)||(365809-365872)
[»] scaffold0578 (1 HSPs)
scaffold0578 (181-228)||(8781-8828)


Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 21278866 - 21279134
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21278866 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctaatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 21278965  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  21278966 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaaaaaagaaggaatatgct 21279065  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  21279066 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 21279134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 26015663 - 26015931
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26015663 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 26015762  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  26015763 tatggttttaaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 26015862  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  26015863 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 26015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 25877059 - 25876791
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25877059 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttatttgaaatcatgaatggacgtgagaaag 25876960  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25876959 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatgattttggaagaggggttttggggtgtaaccaagaaagaaggaatatgct 25876860  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  25876859 ttttgaaaatcaaattttataaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 25876791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 43246754 - 43247022
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43246754 gagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 43246853  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  43246854 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 43246953  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  43246954 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 43247022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 46321843 - 46322111
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46321843 gagaacccataacaagaaaaacacaatcgattcaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 46321942  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  46321943 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 46322042  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  46322043 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 46322111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 47065737 - 47066005
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  47065737 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 47065836  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  47065837 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 47065936  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  47065937 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaagtagggtg 47066005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 47779305 - 47779571
Alignment:
Q  13 gagaacccataagaagaaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaa 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  47779305 gagaacccataagaagaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcataaatggacgtgagaaa 47779404  T
Q  111 gtatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 206  Q
     ||||  ||| |||||||||||||||||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47779405 atatgattttgaaaatcttcgcagaacacaatcgatcgattgtagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 47779504  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  47779505 tttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagg 47779571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 7900716 - 7900451
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  7900716 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 7900617  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  7900616 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 7900517  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  7900516 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagg 7900451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 40995470 - 40995202
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40995470 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 40995371  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  40995370 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatatgct 40995271  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||||    
T  40995270 ttttgataatcaaattttatgaaaggg--taatcttatcattttggggtgcaaccatgattaantagggtg 40995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 32541980 - 32542248
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  32541980 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgaaaaag 32542079  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||| ||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  32542080 tatggttttgaaaatcttcgtagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 32542179  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  32542180 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 32542248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 8203238 - 8203506
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8203238 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 8203337  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| | |    
T  8203338 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaaaggggttttggggtgtaaccaaaaaagaaggaataggtt 8203437  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  8203438 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggagtgcaaccatgattaactaaggtg 8203506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 8215715 - 8215983
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8215715 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 8215814  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| | |    
T  8215815 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaaaaggggttttggggtgtaaccaaaaaagaaggaataggtt 8215914  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  8215915 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggagtgcaaccatgattaactaaggtg 8215983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 46924160 - 46923893
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46924160 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 46924062  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  46924061 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 46923962  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  46923961 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactatggtg 46923893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 34591959 - 34591691
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34591959 gagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 34591860  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| ||||||| || ||| |||||||| |||    
T  34591859 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaacaaaaaaaaaaggaataggct 34591760  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  34591759 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttgaggtgcaaccatgattaactagggtg 34591691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 40705310 - 40705577
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40705310 gagaacccataacaagacaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 40705409  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||| |||    
T  40705410 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaa-aatgaaggaataggct 40705508  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  40705509 ttttgaaaatcaaattttatgaaaggg--caatcttgtcattttggggtgcaaccatgattaactagggtg 40705577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 27325238 - 27324973
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27325238 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 27325139  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||| |||    
T  27325138 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgaaagaagggttttggggtgtaaccaaaaaagaaggaataggct 27325039  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||| |||||||||| ||||||||||    
T  27325038 ttttgaaaatcaaattttatgaaagg--ataatcttatcattttggagtgcaaccataattaactagg 27324973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 36 - 278
Target Start/End: Original strand, 38875874 - 38876119
Alignment:
Q  36 caatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcag 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  38875874 caatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcag 38875973  T
Q  135 aacacaat----cgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaa 230  Q
    ||||||||    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  38875974 aacacaattgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaa 38876073  T
Q  231 agggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  38876074 aggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 38876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 39 - 278
Target Start/End: Original strand, 38283414 - 38283656
Alignment:
Q  39 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaac 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  38283414 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaac 38283513  T
Q  138 acaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagg 233  Q
    |||||||    ||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283514 acaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagg 38283613  T
Q  234 gtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |  |||| |||||||||||||||||||||||||||||||||||||    
T  38283614 g--taatattgtcattttggggtgcaaccatgattaactagggtg 38283656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 7791187 - 7790918
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  7791187 gagaactcataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatttgctttgaaatcatgaatggacgtgagaaag 7791088  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaac-caagaaagaaggaatatgc 206  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||||||||||||||||  |||||| |||||||  || |||||||||||| ||    
T  7791087 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggatttttggggtgtaacaaaaaaaagaaggaataggc 7790988  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
     |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  7790987 attttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 7790918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 40994610 - 40994874
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatg-gcgtgagaaag 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||  ||||||||||    
T  40994610 gagaactcataacaagaaaaacacaatcgattgaagaacaacacttgctaacctggtttgcttcgaattttcttggaaatcatgaatgaacgtgagaaag 40994709  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||||  ||    
T  40994710 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaaaaaagaaggaatagact 40994809  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactag 274  Q
    |||||||||||||||||||| |||||  ||||||| || |||||  |||||||||||||||||||||    
T  40994810 ttttgaaaatcaaattttataaaagg--ataatctcgttattttatggtgcaaccatgattaactag 40994874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 32662186 - 32662433
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  32662186 gagaacccataacaggaaaaacacaattgattgaagaacaacacttgctaacatgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 32662285  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgcttttt 211  Q
    ||||| ||| |||||||||||||||                 |||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||||||    
T  32662286 tatggttttgaaaatcttcgcagaa-----------------ttatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagacttttt 32662368  T
Q  212 gaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  32662369 gaaaatcaaattttatgaaaagg--taatcttgtcattttggggtgcaaccatgattaactagggtg 32662433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 35924316 - 35924245
Alignment:
Q  205 gctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  35924316 gctttttgaaaatcaaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 35924245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 35924388 - 35924318
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaatttt 83  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35924388 gagaacccataacaagaaaaacgcaatcgattgaagaacaacacttgctaacctgatttgtttcgaatttt 35924318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 275
Target Start/End: Complemental strand, 43775993 - 43775901
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||| || ||||||||||||||||||| |||||| ||||    
T  43775993 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagg--ataattttatcattttggggtgcaaccaggattaaatagg 43775901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 39597843 - 39597930
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||| |||  ||||| |||||||||||||||||||||| ||||||    
T  39597843 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgacagg--ataattttgtcattttggggtgcaaccaggattaa 39597930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 45870127 - 45870223
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| ||||||||||| ||||||||||    
T  45870127 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttgtcattttgaggtgcaacca 45870223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 20492809 - 20492707
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |||||||| |||||| |||||||||| |||||||  || ||||||||||||||||||||||     
T  20492809 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttt-gaaaattaaattttatggaagggta--attttgtcattttggggtgcaaccag 20492713  T
Q  265 gattaa 270  Q
    ||||||    
T  20492712 gattaa 20492707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 24980965 - 24980878
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| |||||||||| ||||||||||| ||||||    
T  24980965 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttgtcattttagggtgcaaccaggattaa 24980878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 40862469 - 40862382
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||| |||||||||| |||||||| || ||||||    
T  40862469 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagg--ataattttgtcattttagggtgcaatcaggattaa 40862382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 42436462 - 42436565
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||| ||||||||||||||  |||||||||| |||||  ||||||||||||||||||||||| |||     
T  42436462 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaactaaattttatggaaggg--taatcttgtcattttggggtgcagccag 42436559  T
Q  265 gattaa 270  Q
    ||||||    
T  42436560 gattaa 42436565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 42095782 - 42095839
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  42095782 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 42095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 19021015 - 19021087
Alignment:
Q  164 ggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    ||||||| |||||||| |||||||||| ||| |||||| |  |||||||||||||||||||||||||||||||    
T  19021015 ggaagagaggttttggggtgtaaccaaaaaataaggaagagactttttgaaaatcaaattttatgaaagggta 19021087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 39074364 - 39074421
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  39074364 aaattttatgaaagggta--atcttgtcattttagggtgcaaccatgattaactagggtg 39074421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 43047094 - 43047151
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  43047094 aaattttatgaaagggta--atcttgtcattttagggtgcaaccatgattaactagggtg 43047151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 12847148 - 12847235
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| ||| || ||||||||||||||| |||||||||| |||||  |||| || ||||||||| ||||||||| ||||||    
T  12847148 gtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaaggg--taattttatcattttggagtgcaaccaggattaa 12847235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 7883634 - 7883737
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcatttt-ggggtgcaacca 263  Q
    |||||||| |||| | ||||| |||||||| |||||| |||||||||||||||  |||||||||||||||  |||| || ||||||| ||||||||||||    
T  7883634 gaagagggattttagggtgtacccaagaaaaaaggaagatgctttttgaaaat-taattttatgaaaggg--taattttttcattttgggggtgcaacca 7883730  T
Q  264 tgattaa 270  Q
     ||||||    
T  7883731 ggattaa 7883737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 40305431 - 40305527
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||| |||| | |||||||||||||| |||| | |||| |||||||||| ||||||| ||||||||  |||| ||||||||||  ||||||||||    
T  40305431 gaagagggattttagggtgtaaccaagaaaaaaggcagatgcattttgaaaattaaattttttgaaaggg--taattttgtcatttttaggtgcaacca 40305527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 10594194 - 10594107
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||| ||||| |||||||||| ||||   ||||  ||| ||||||||||||||||| ||||||    
T  10594194 gtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatggaagg--ttaattctgttattttggggtgcaaccaggattaa 10594107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 25765110 - 25765044
Alignment:
Q  29 aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcat 95  Q
    ||||||| | ||||||||||||||  || ||||||||| || |||||||||||||||||||||||||    
T  25765110 aaaaacatagtcgattgaagaacacaacatgctaaccttatctgcttcgaattttctttgaaatcat 25765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 29042269 - 29042167
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||| |||||| ||||||||  ||||||||||||||  ||||| ||||||||||| |||||||| |     
T  29042269 gaagagggattttagggtgtaaccaagaaaaaatgaagatgcttgttgaaaat-taattttatgaaagg--ataattttgtcattttgaggtgcaactag 29042173  T
Q  265 gattaa 270  Q
    ||||||    
T  29042172 gattaa 29042167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 36688694 - 36688796
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |||||||||||||||  ||||||||| ||||  ||||| ||||||||||| | |||||| |     
T  36688694 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaat-taattttatggaagg--ataattttgtcattttgagatgcaacaag 36688790  T
Q  265 gattaa 270  Q
    ||||||    
T  36688791 gattaa 36688796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 48642172 - 48642094
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 93  Q
    ||||| |||| |||||||| | ||||||||||||||||  |||| ||||||| |  |||||||||||||||||||||||    
T  48642172 gaaccaataacaagaaaaatataatcgattgaagaacacaacttactaacctcacatgcttcgaattttctttgaaatc 48642094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 21874639 - 21874693
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    ||||||||||||||   |||||||||||||||| |||||||||||||||||||||||    
T  21874639 aaattttatgaaaga--ataatcttgtcattttagggtgcaaccatgattaactagg 21874693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 241791 - 241705
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| |||||||||||||||  ||||||||| |||||  |||| || |||||||  ||||||| |||||||||    
T  241791 gtgtaaccaagaaaaaaggaagatgctttttgaaaat-taattttatggaaggg--taattttatcattttaaggtgcaagcatgattaa 241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 46101914 - 46101868
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttat 227  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||    
T  46101914 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttat 46101868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 47540417 - 47540353
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaa-ggaatatgctttttgaaaatcaaattttatg 228  Q
    |||||||| |||| | |||||||||||||| || |||| ||||||||||||||| ||||||||||    
T  47540417 gaagagggattttagggtgtaaccaagaaaaaaaggaagatgctttttgaaaattaaattttatg 47540353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 228
Target Start/End: Complemental strand, 47546974 - 47546910
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaa-ggaatatgctttttgaaaatcaaattttatg 228  Q
    |||||||| |||| | |||||||||||||| || |||| ||||||||||||||| ||||||||||    
T  47546974 gaagagggattttagggtgtaaccaagaaaaaaaggaagatgctttttgaaaattaaattttatg 47546910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 12428725 - 12428641
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcatttt 251  Q
    |||||||| |||| | |||||||||||||| |||||| ||| ||||| ||||| |||||| ||| ||||  ||||| ||||||||||    
T  12428725 gaagagggattttagggtgtaaccaagaaaaaaggaagatgttttttaaaaattaaatttgatggaagg--ataattttgtcatttt 12428641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 277
Target Start/End: Original strand, 30173420 - 30173530
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttat-gaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||| |||| | ||||||| || ||| |||||| ||| ||||||||||| ||||||||| ||||||   |||| |||||||||||   ||||||||    
T  30173420 gaagagggattttagggtgtaacaaaaaaaaaaggaagatgttttttgaaaattaaattttatagaaagg---taattttgtcattttgaaatgcaacca 30173516  T
Q  264 tgattaactagggt 277  Q
     |||||| ||||||    
T  30173517 agattaaatagggt 30173530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 48642060 - 48641965
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    ||||||| ||||| |  ||||||||||||||||| || ||||||||| ||||| ||||| |||||||| |  |||| ||||| |||||||||| |||||    
T  48642060 gaagaggagttttaggatgtaaccaagaaagaagaaaaatgctttttaaaaat-aaattctatgaaagag--taattttgtcgttttggggtgtaacca 48641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 44709873 - 44709964
Alignment:
Q  184 taaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggt 277  Q
    ||||||||||| || ||| ||||||||||||||| ||||||||| |||||  ||||| || |||||||  | | |||||| |||||| ||||||    
T  44709873 taaccaagaaaaaatgaagatgctttttgaaaattaaattttataaaagg--ataattttatcattttatgatacaaccaggattaaatagggt 44709964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 48874357 - 48874403
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttat 227  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||    
T  48874357 gtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttat 48874403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 29630298 - 29630565
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  29630298 gagaacccataagaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgctttgaattttctttgaaatcatgaatggacgtgagaaag 29630396  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29630397 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaagaaggaatatgct 29630496  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29630497 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 29630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 3094871 - 3094603
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  3094871 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacatgatttgcttcgaattttatttgaaatcatgaatggacgtgagaaag 3094772  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||| |||||||    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  3094771 tatggttttgaaaatcttcgcagaacataatcgatcgattggagaattatggttttggaagagaggttttggggtgtaaccaagaaagaaggaatatgct 3094672  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  3094671 ttttgaaaatcaaattttatgaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 3094603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 18893958 - 18893690
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18893958 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 18893859  T
Q  112 tatggatttaaaaatcttcgcagaaca----caatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||    |||||| |||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||    
T  18893858 tatggttttgaaaatcttcgcagaacacaatcaatcggttggagaattatggttctggaagaagggttttggggtgtaaccaaaaaagaaggaatatgct 18893759  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  18893758 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgtaaccatgattaactagggtg 18893690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 6625641 - 6625373
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatg-gcgtgagaaag 111  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6625641 gagaacccataacaagaaaaacacaatctattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaag 6625542  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  6625541 tatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 6625442  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  6625441 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttagggtgcaaccatgattaactagggtg 6625373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 29122155 - 29122423
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29122155 gagaacccataataagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 29122254  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||| ||||||    |||||||| |||||||||||||||||||| ||||||||  |||||||||| |||||||||||| |||    
T  29122255 tatggttttgaaaatcttcgcataacacaatcgatcgattgaagaattatggttttggaagaagggttttgaggtgtaaccaaaaaagaaggaataggct 29122354  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29122355 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 29122423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 7141546 - 7141278
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7141546 gagaacccataacaaaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 7141447  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||| |||    
T  7141446 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaataggct 7141347  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||    
T  7141346 ttttgaaaatcaaattttatgaaagg--ataatcttgttattttggggtgcaactatgattaactagggtg 7141278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 6167750 - 6168005
Alignment:
Q  26 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  6167750 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatgggtttgaaa 6167849  T
Q  125 atcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaa 220  Q
    ||||||||||||||||    ||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  6167850 atcttcgcagaacacaatcgatcgattggagaattatggatttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaa 6167949  T
Q  221 attttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||   ||||||||||||||| ||||||||||||||||||||||||||    
T  6167950 attttatgaaagg--ttaatcttgtcattttagggtgcaaccatgattaactagggtg 6168005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 77 - 278
Target Start/End: Original strand, 25335003 - 25335207
Alignment:
Q  77 gaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagagg 171  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||| |    
T  25335003 gaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaag 25335102  T
Q  172 ggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaac 271  Q
    |||||||| ||||||| || |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  25335103 ggttttggggtgtaacaaaaaaagaaggaataagctttttgaaaatcaaattttatgaaagg--ataatcttgtcattttgaggtgcaaccatgattaac 25335200  T
Q  272 tagggtg 278  Q
    |||||||    
T  25335201 tagggtg 25335207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 13889849 - 13890027
Alignment:
Q  102 cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaa 197  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  13889849 cgtgagaaagtatggttttgaaaatcttcgtagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaa 13889948  T
Q  198 ggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||| ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||    
T  13889949 ggaataggctttttgaaaatcaaattttatgaaaggg--taatcttgttattttggggtgcaaccatgattaattagggtg 13890027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 8811261 - 8811357
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||  ||||| || ||||||||||||| |||||    
T  8811261 gaagaagggttttggagtgtaaccaagaaaaaaggaagatgctttttcaaaatcaaattttatgtaagg--ataattttatcattttggggtgtaacca 8811357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 7081098 - 7081002
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||||||  ||||  ||||| || ||||||||||||| |||||    
T  7081098 gaagagggattttggagtgtaaccaaaaaagaaggaagaggctttttgaaaatcaaattttatctaagg--ataattttatcattttggggtgtaacca 7081002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 6925903 - 6925800
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| |  ||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| ||||||||||||||||||| ||     
T  6925903 gaagagggattttaggatgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaatcag 6925806  T
Q  265 gattaa 270  Q
    ||||||    
T  6925805 gattaa 6925800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 34085821 - 34085904
Alignment:
Q  184 taaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatta 269  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| |||||||||||||||||||||| |||||    
T  34085821 taaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttgtcattttggggtgcaaccaggatta 34085904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 23350464 - 23350377
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| |  ||||||||||||||||||| ||||||    
T  23350464 gtgtaaacaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataatttgatcattttggggtgcaaccaggattaa 23350377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 7081232 - 7081155
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 92  Q
    |||||||||| |||||||||| ||| |||||||||| |  ||||| |||||| |||||||||||| ||||||||||||    
T  7081232 gaacccataacaagaaaaacataattgattgaagaatacaacttgttaaccttatttgcttcgaaatttctttgaaat 7081155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 8811127 - 8811204
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 92  Q
    |||||||||| |||||||||| ||| |||||||||| |  |||||||||||| |||||||| ||| ||||||||||||    
T  8811127 gaacccataacaagaaaaacataattgattgaagaatacaacttgctaaccttatttgctttgaaatttctttgaaat 8811204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 18024505 - 18024436
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaaggg 234  Q
    ||||||||||||| | ||||||||||||||||||||| | ||||||| ||||| | ||||||||||||||    
T  18024505 gaagaggggttttcgggtgtaaccaagaaagaaggaagaagctttttcaaaattagattttatgaaaggg 18024436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 11369054 - 11369141
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| || |||||||||||| |||||||||  ||| |  |||| ||||||||||| |||||||||| ||||||    
T  11369054 gtgtaaccaagaaaaaaggaagattctttttgaaaattaaattttatagaagag--taattttgtcattttgaggtgcaaccaagattaa 11369141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 5715003 - 5714932
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||| |||| | |||||||||| | | || ||| ||||||||||||||| ||||||||||||||||||    
T  5715003 gaagagggattttagggtgtaaccaaaagaaaatgaagatgctttttgaaaattaaattttatgaaagggta 5714932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 13889811 - 13889849
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaac 51  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  13889811 gagaacccataacaagaaaaacacaatcgattgaagaac 13889849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 31091150 - 31091206
Alignment:
Q  212 gaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||| |||||||||| |||||||  || |||||||||||||||||||||| ||||||    
T  31091150 gaaaattaaattttatggaagggta--attttgtcattttggggtgcaaccaggattaa 31091206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 32173670 - 32173765
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgc-tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||||| ||||| |||||| | || ||||||||||| ||||||||| ||| ||  |||| ||||||||||||| || |||||    
T  32173670 aagaggggttttggggtgtaaccgagaaa-aaggaagaggcttttttgaaaattaaattttataaaatgg--taattttgtcattttgggatgtaacca 32173765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 8525613 - 8525555
Alignment:
Q  203 atgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    ||||||||||||||| |||||||||| |||||  |||| || |||||||||| ||||||||    
T  8525613 atgctttttgaaaattaaattttatggaaggg--taattttatcattttgggatgcaacca 8525555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 29623168 - 29623233
Alignment:
Q  203 atgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||||| |||||||||| || |  ||||| ||||||||||  |||||||||| ||||||    
T  29623168 atgctttttgaaaattaaattttatggaaag--ataattttgtcattttaaggtgcaaccaggattaa 29623233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 20048618 - 20048352
Alignment:
Q  13 gagaacccataagaagaaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaa 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20048618 gagaacccataagaagaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaa 20048519  T
Q  111 gtatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 206  Q
    |||||  ||| |||||||||||||||||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20048518 gtatgattttgaaaatcttcgcagaacacaatcgatcgattgtagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 20048419  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  20048418 tttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagg 20048352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 10999560 - 10999828
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10999560 gagaacccataagaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 10999659  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||| |||||||||||||||||||    |||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  10999660 tatggttttgaaattcttcgcagaacacaatcgatctattgcagaattatggttttggaagaggggttttgggatgtaaccaagaaagaaggaatatgct 10999759  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10999760 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 10999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 20835396 - 20835664
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20835396 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 20835495  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  20835496 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 20835595  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  20835596 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 20835664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 22781721 - 22781989
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22781721 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 22781820  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  22781821 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 22781920  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  22781921 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttgtggtgcaaccatgattaactagggtg 22781989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 37971488 - 37971756
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37971488 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 37971587  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||| |||    
T  37971588 tatggtttttaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaatgaataggct 37971687  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  37971688 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 37971756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 38871403 - 38871135
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38871403 gagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 38871304  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||| |||    
T  38871303 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaatggttttggggtgtaaccaaaaaagaaggaataggct 38871204  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  38871203 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 38871135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 4515828 - 4516096
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4515828 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 4515927  T
Q  112 tatggatttaaaaatcttcgcagaacac----aatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||    ||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||| |||    
T  4515928 tatggttttgaaaatcttcgcagaacacaatgaatcgattggagaattatggttttggaagaaaggttttggggtgtaaccaaaaaagaaggaataggct 4516027  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  4516028 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagggtg 4516096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 25711169 - 25710901
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  25711169 gagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaaa 25711070  T
Q  112 tatggatttaaaaatcttcgcagaaca----caatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||    | ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  25711069 tatggttttgaaaatcttcgcagaacaccatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 25710970  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  25710969 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 25710901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 40585985 - 40586253
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  40585985 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgcttcgaattttctttaaaatcatgaatggacgtgagaaag 40586084  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||| ||||||||    |||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||    
T  40586085 tatggttttgaaaatcttcgaagaacacaatcgatcgattggagaattatggttttggaagaaaggttttggggtgtaaccaaaaaagaaggaatatgct 40586184  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  40586185 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 40586253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 33712438 - 33712705
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33712438 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 33712536  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  33712537 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 33712636  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  33712637 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagggtg 33712705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 4044622 - 4044890
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  4044622 gagaacccataataagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgctttgaattttctttgaaatcatgaatggacgtgagaaag 4044721  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||| ||||||||    |||||||| |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  4044722 tatggttttgaaaatcttcgtagaacacaatcgatcgattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 4044821  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||    
T  4044822 ttttgaaaatcaaattttatgaaaggg--taatcttgttattttggggtgcaaccatgattaactagggtg 4044890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 10841247 - 10841514
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10841247 gagaacccataacaagagaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 10841345  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||| ||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  10841346 tatggttttgaaaatcttcgcaaaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 10841445  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10841446 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 10841514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 53974592 - 53974325
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53974592 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgttaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 53974494  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  53974493 tatggttttgaaaatcttcgcagaacacaatcgatggattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 53974394  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  53974393 ttttgaaaatcaaattttatgaatggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 53974325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 41070117 - 41069851
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41070117 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 41070019  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||| ||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  41070018 tatggttttgaaaatcttcgcaaaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 41069919  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  41069918 ttttgaaaatcaaattttatgaaaggg--taatcttgtcatttt-aggtgcaaccatgattaactagggtg 41069851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 36430549 - 36430282
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36430549 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 36430451  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||| ||||||    |||||||||||||||||| |||||||||| ||||||||| ||||||| || |||||||||||| |||    
T  36430450 tatggttttgaaaatcttcgcaaaacacaatcgatcgattggagaattatgattttggaagaagggttttggggtgtaacaaaaaaagaaggaataggct 36430351  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||    
T  36430350 ttttgaaaatcaaattttatcaaagag--taatcttgtcattttggggtgcaaccatgattaactagggtg 36430282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 260
Target Start/End: Original strand, 6268173 - 6268422
Alignment:
Q  14 agaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagt 112  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6268173 agaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagt 6268272  T
Q  113 atggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctt 208  Q
    |||| ||| |||||||||| ||||||||    |||||||||||||||||||||||||||||  |||||||| ||||||  || |||||||||||| ||||    
T  6268273 atggttttgaaaatcttcgtagaacacaatcgatcgattggagaattatggttttggaagaacggttttggggtgtaataaaaaaagaaggaataggctt 6268372  T
Q  209 tttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaa 260  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||||||||    
T  6268373 tttgaaaatcaaattttaggaaaggg--taatcttgtcattttggggtgcaa 6268422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 33967164 - 33966910
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  33967164 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggatgtgagaaag 33967065  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||| ||||||||              |||||||| |||||||||| ||||||||||||  ||    
T  33967064 tatggttttgaaaatcttcgcagaacacaatcgatcgattgaagaattat--------------ggttttggggtgtaaccaaaaaagaaggaatagact 33966979  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  33966978 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttgggatgcaaccatgattaactagggtg 33966910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 52 - 278
Target Start/End: Original strand, 7156541 - 7156753
Alignment:
Q  52 aacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcgattgga 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||| |||    |||         |||| |||||    
T  7156541 aacacttgctaacctgatttgcttcgaattttctttgaaatcatgaaaggacgtgagaaagtatggttttgaaa----tcg---------atcgtttgga 7156627  T
Q  151 gaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattt 250  Q
    ||| ||||||||||||||||||||||||| |||||||| | ||||||||||||  || ||||||||||||||||||||||||||  ||||||| ||||||    
T  7156628 gaaatatggttttggaagaggggttttggggtgtaacctaaaaagaaggaatagactctttgaaaatcaaattttatgaaaggg--taatcttatcattt 7156725  T
Q  251 tggggtgcaaccatgattaactagggtg 278  Q
    |||| |||||||||||||||||||||||    
T  7156726 tgggatgcaaccatgattaactagggtg 7156753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 36885711 - 36885814
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||  |||| |||||||||| |||||||||||     
T  36885711 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaataaaattttatgaaaggg--taattttgtcattttagggtgcaaccag 36885808  T
Q  265 gattaa 270  Q
    ||||||    
T  36885809 gattaa 36885814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 7680974 - 7681085
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||| |||||| | |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| |||||||||| |||||||||||     
T  7680974 gaagagaggttttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttagggtgcaaccag 7681071  T
Q  265 gattaactagggtg 278  Q
     ||||| |||||||    
T  7681072 aattaaatagggtg 7681085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 35039682 - 35039595
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  35039682 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaaccaggattaa 35039595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 49779841 - 49779928
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||| |  ||||| ||||||||||||| |||||||| ||||||    
T  49779841 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaag--ataattttgtcattttgggatgcaaccaagattaa 49779928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 84460 - 84403
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  84460 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 84403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 32236204 - 32236147
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32236204 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 32236147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 38145211 - 38145307
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||||||||| ||||||||||||||||  |||| |||||||||| |||||||||||    
T  38145211 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaaggg--taattttgtcattttagggtgcaacca 38145307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 11123984 - 11123881
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| ||| || || |||||||||||| |||||||||| |||||  |||| |||||||||||||| |||||||     
T  11123984 gaagagggattttagggtgtaaccaagaaaaaagaaagatactttttgaaaattaaattttatggaaggg--taattttgtcattttggggcgcaaccag 11123887  T
Q  265 gattaa 270  Q
    ||||||    
T  11123886 gattaa 11123881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 36232642 - 36232745
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||| ||||| ||||||||||||||||  |||| |||||||||| |||||||||||     
T  36232642 gaagagggattttagggtgtaaccaagaaaaaaggaagagtcttttttaaaattaaattttatgaaaggg--taattttgtcattttagggtgcaaccag 36232739  T
Q  265 gattaa 270  Q
    ||||||    
T  36232740 gattaa 36232745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 44354485 - 44354572
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| | |||||||| ||||||||||| |||||||||| ||||  |||||  ||||||||||||||||||||| ||||||    
T  44354485 gtgtaaccaagaaaaatggaatatgttttttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaaccaggattaa 44354572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 24395167 - 24395113
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  24395167 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagg 24395113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 48584943 - 48584857
Alignment:
Q  182 tgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||| ||| || ||||||||||||||| |||||||||||||||  ||||| |||||||||||| || |||||| ||||||    
T  48584943 tgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatgaaagg--ataattttgtcattttggagtacaaccaggattaa 48584857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 7679722 - 7679779
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  7679722 aaattttatgaaagggta--atcttgtcattttggagtgcaaccatgattaactagggtg 7679779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 20657412 - 20657469
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  20657412 aaattttatgaaagggta--atcttgtcattttggagtgcaaccatgattaactagggtg 20657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 26090273 - 26090216
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  26090273 aaattttatgaaagggta--atcttgtcattttgaggtgcaaccatgattaactagggtg 26090216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 47098274 - 47098345
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    ||||| ||||||||| ||||||||||||||||||||| |  |||||||||||| |||||||||| |||||||    
T  47098274 gaagaagggttttggggtgtaaccaagaaagaaggaagagactttttgaaaatgaaattttatgcaagggta 47098345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 11095773 - 11095662
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||| ||||  ||||||||  | ||||||||||  | ||||||||     
T  11095773 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaatattatagaagggtat--ttttgtcattttatgatgcaaccag 11095676  T
Q  265 gattaactagggtg 278  Q
    |||||| |||||||    
T  11095675 gattaaatagggtg 11095662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 14279232 - 14279129
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||| ||||||||||||||| |||||||||| ||  |  |||| |||||||||| |||||||||||     
T  14279232 gaagagggattttagggtgtaaccaagaaaaaatgaacatgctttttgaaaattaaattttatggaaaag--taattttgtcattttagggtgcaaccag 14279135  T
Q  265 gattaa 270  Q
    ||||||    
T  14279134 gattaa 14279129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 30418800 - 30418713
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||  ||||  |||||  ||||||||||| ||||| ||||||||||    
T  30418800 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatagaagg--ataattctgtcattttggagtgcagccatgattaa 30418713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 36841092 - 36841179
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| || |||||||| ||| |||||| ||||||    
T  36841092 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttatcattttgaggtacaaccaggattaa 36841179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 47098139 - 47098217
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 93  Q
    |||||||| | |||||||||| ||| ||||||||||||  |||||||||||| ||||||||| ||||||||||| ||||    
T  47098139 gaacccatgacaagaaaaacataattgattgaagaacacaacttgctaaccttatttgcttcaaattttctttgcaatc 47098217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 51662149 - 51662236
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| || ||||||| || |||||||| ||||||    
T  51662149 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttatcattttaggatgcaaccaggattaa 51662236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 54556467 - 54556402
Alignment:
Q  171 gggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    ||||||||| |||||||||||| |||||||| |  |||||| ||||||||||||||||||||||||    
T  54556467 gggttttggggtgtaaccaagagagaaggaagaaactttttaaaaatcaaattttatgaaagggta 54556402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 672139 - 672082
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||||||    
T  672139 aaattttatgaaagggta--atcttatcattttggagtgcaaccatgattaactagggtg 672082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 52812253 - 52812168
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttg 252  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||| ||  | ||||| |||||||||||    
T  52812253 gaagagggattttagtgtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaa--gaataattttgtcattttg 52812168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 39627093 - 39627176
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcatttt 251  Q
    ||||||||||||||| |||||||||| |||||||||| || |||||| ||||| ||||||||| |||||  ||||| ||||||||||    
T  39627093 gaagaggggttttggggtgtaaccaaaaaagaaggaaaatactttttaaaaat-aaattttataaaagg--ataattttgtcatttt 39627176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 1774296 - 1774218
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 93  Q
    |||||||| | ||| |||||| ||||||||||||||||   ||| ||||||| ||||||||| ||||||||||||||||    
T  1774296 gaacccatgacaagtaaaacataatcgattgaagaacatagcttcctaaccttatttgcttcaaattttctttgaaatc 1774218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 2613313 - 2613400
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||| ||||||||||| |||||||||||||||  ||||| || ||||||||   |||||||| ||||||    
T  2613313 gtgtaaccaagaaaaaaggaagatgttttttgaaaattaaattttatgaaagg--ataattttatcattttgaaatgcaaccaagattaa 2613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 4596413 - 4596499
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| |||||||||||||||  ||||||||| |||||  |||| ||||||||||||| |||||| | ||||||    
T  4596413 gtgtaaccaagaaaaaaggaagatgctttttgaaaat-taattttatggaaggg--taattttgtcattttgggatgcaactaggattaa 4596499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 33392635 - 33392526
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatg 265  Q
    |||||| |||||||  ||||||| ||||| |||||| |  |||||||||||| ||||||||||||| ||  |||| |||||||||||||||  ||||| |    
T  33392635 aagaggtgttttgggatgtaaccgagaaa-aaggaaaagactttttgaaaattaaattttatgaaaagg--taattttgtcattttggggtataaccagg 33392539  T
Q  266 attaactagggtg 278  Q
    ||||| |||||||    
T  33392538 attaaatagggtg 33392526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 228
Target Start/End: Complemental strand, 1774162 - 1774098
Alignment:
Q  164 ggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatg 228  Q
    ||||||||||||||||  |||||||||||||||||||| |  |||||| ||||| ||||||||||    
T  1774162 ggaagaggggttttgggatgtaaccaagaaagaaggaagaaactttttaaaaattaaattttatg 1774098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 263
Target Start/End: Original strand, 8947833 - 8947927
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||| | ||||||| ||| ||||||||| | ||||||||||||||||| | ||||||||   ||||| ||||||||| || ||| |||||    
T  8947833 aagaggggttttagggtgtaacaaaggaagaaggaagaggctttttgaaaatcaaactatatgaaag---ataattttgtcatttcggagtgtaacca 8947927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 52343192 - 52343145
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatg 228  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  52343192 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatg 52343145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 19941792 - 19941745
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatg 228  Q
    ||||||| |||||| |||||| ||||||||||||||| ||||||||||    
T  19941792 gtgtaacaaagaaaaaaggaagatgctttttgaaaattaaattttatg 19941745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 43518093 - 43518362
Alignment:
Q  13 gagaacccataagaagaaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaa 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  43518093 gagaacccataagaagaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcattaatggacgtgagaaa 43518192  T
Q  111 gtatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 206  Q
    |||||| ||| |||||||||||||||||||||||||    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43518193 gtatggttttgaaaatcttcgcagaacacaatcgatcgattgtagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 43518292  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||    
T  43518293 tttttgaaaatcaaattttatgaaaggg--tactcttgtcattttggggtgcaaccatgattaactagggtg 43518362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 9065981 - 9065713
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9065981 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 9065882  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  9065881 tatggttttgaaaatcttcgcagaacacaatcgatcaattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 9065782  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9065781 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 9065713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 43293460 - 43293728
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43293460 gagaacccataacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 43293559  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  43293560 tatggttttgaaaatcttcgcagaacacaatcgatctgttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 43293659  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||    
T  43293660 ttttgaaaatcaaattttataaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 43293728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 4155971 - 4156239
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4155971 gagaacccgtaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 4156070  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||  ||| |||||||||||||||||||    |||||||||||||||||| |||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  4156071 tatgattttgaaaatcttcgcagaacacaatcgatcgattggagaattatgattttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 4156170  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4156171 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 4156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 33281092 - 33280824
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33281092 gagaacccataacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 33280993  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||||    ||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  33280992 tatggttttgaaaatcttcgcagaacacaatcgatcggttggaaaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 33280893  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||    
T  33280892 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtacaaccatgattaactagggtg 33280824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 24559351 - 24559083
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24559351 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 24559252  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||| |||||||||||||||| ||||  |||||||| |||||||||| ||||||||||||  ||    
T  24559251 tatggttttgaaaatcttcgcagaacacagtcgatcgattagagaattatggttttgtaagaaaggttttggggtgtaaccaaaaaagaaggaatagact 24559152  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  24559151 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgactaactagggtg 24559083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 24600383 - 24600115
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24600383 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 24600284  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||| |||||||||||||||| ||||  |||||||| |||||||||| ||||||||||||  ||    
T  24600283 tatggttttgaaaatcttcgcagaacacagtcgatcgattagagaattatggttttgtaagaaaggttttggggtgtaaccaaaaaagaaggaatagact 24600184  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||    
T  24600183 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgactaactagggtg 24600115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 26 - 278
Target Start/End: Original strand, 31527393 - 31527648
Alignment:
Q  26 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaa 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||    
T  31527393 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttgaaa 31527492  T
Q  125 atcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaa 220  Q
    ||||||||||||||||||||||    || |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  31527493 atcttcgcagaacacaatcgatcgattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaa 31527592  T
Q  221 attttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  31527593 attttatgaaaggg--taatcttgtcattttggagtgcaaccatgattaactagggtg 31527648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 19034523 - 19034791
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaat-ggcgtgagaaag 111  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||    
T  19034523 gagaatccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcataaatagacgtgagaaag 19034622  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| |||||||||  ||||||||| |||||||||||| |||    
T  19034623 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttgggatgtaaccaaaaaagaaggaataagct 19034722  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||    
T  19034723 ttttgaaaatcaaattttatgaaagg--ataatcttgttattttggggtgcaaccatgattaactaaggtg 19034791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 270
Target Start/End: Complemental strand, 37866158 - 37865898
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaat-ggcgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  37866158 gagaacccataataagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatagacgtgagaaag 37866059  T
Q  112 tatggatttaaaaatcttcgcagaacacaatc----gattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||    ||||||||||||||||||||||||||  |||||||| |||||||||| ||||||| |||| |||    
T  37866058 tatggttttgaaaatcttcgcagaacacaatcgattgattggagaattatggttttggaagaatggttttggggtgtaaccaaaaaagaagaaataggct 37865959  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||    
T  37865958 ttttgaaaatcaaattttatgaaagg--ataattttgtcattttggggtgcaatcatgattaa 37865898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 13145684 - 13145951
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13145684 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacatgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 13145782  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||| ||||||||||    ||||||| ||||||||||||||||||||| ||||||||| |||||| ||| |||||||||| | | |    
T  13145783 tatggttttgaaaatctttgcagaacacaatcgatcgatttgagaattatggttttggaagaagggttttggggtgtaatcaaaaaagaaggaaaaggtt 13145882  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  13145883 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 13145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 10666096 - 10666199
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| || |||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||||     
T  10666096 gaagagggattttagggtgtaaccaagaaaaaaggaagatactttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaaccag 10666193  T
Q  265 gattaa 270  Q
    ||||||    
T  10666194 gattaa 10666199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 31484759 - 31484679
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||||    
T  31484759 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaacca 31484679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 41881895 - 41881975
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| || ||  |||| ||||||||||||||||||||||    
T  41881895 gtgtaaccaagaaaaaaggaatatgctttttgaaaattaaattttatggaaagg--taattttgtcattttggggtgcaacca 41881975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 7338745 - 7338643
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||| ||||||| |||||| ||||||||||||||| ||||||||||||| ||  |||| ||||||||||||||||||||||     
T  7338745 gaagagggattttagggtgtaatcaagaaa-aaggaagatgctttttgaaaattaaattttatgaaaagg--taattttgtcattttggggtgcaaccag 7338649  T
Q  265 gattaa 270  Q
    ||||||    
T  7338648 gattaa 7338643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 8232653 - 8232566
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||| |||||| |||||| ||| ||||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||    
T  8232653 gtgtaactaagaaaaaaggaagatgttttttgaaaattaaattttatgaaaggg--taatcttatcattttggggtgcaaccaggattaa 8232566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 36294303 - 36294204
Alignment:
Q  169 aggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatt 268  Q
    ||||||||||| ||||| ||||| ||||||||| | || |||||||||| |||||||||| |||||  |||| |||||||||||||||| ||||||||||    
T  36294303 aggggttttggggtgtagccaaggaagaaggaagaggccttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgtaaccatgatt 36294206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 37274574 - 37274677
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||| ||||||||||||||| |||||||||| |||||  |||| ||||||||||||||||||| ||     
T  37274574 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaagcag 37274671  T
Q  265 gattaa 270  Q
    ||||||    
T  37274672 gattaa 37274677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 40739018 - 40738915
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||||||||| ||||||||||||||||  |||| |||||||||| |||||||||||     
T  40739018 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaaggg--taattttgtcattttagggtgcaaccag 40738921  T
Q  265 gattaa 270  Q
    ||||||    
T  40738920 gattaa 40738915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 25084928 - 25084871
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25084928 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 25084871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 25142901 - 25142844
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  25142901 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 25142844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 38760537 - 38760593
Alignment:
Q  220 aattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  38760537 aattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 38760593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 12189146 - 12189224
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 93  Q
    |||||||| | |||||||||| ||| ||| |||||||| ||||||||||||| |||||||||||| |||||||||||||    
T  12189146 gaacccatgacaagaaaaacataattgatcgaagaacaccacttgctaacctcatttgcttcgaactttctttgaaatc 12189224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 18522287 - 18522184
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| |||| ||||||||||| |||||| ||| ||||||||||| |||||||||| ||||  ||||| |||| ||||| |||||||||||     
T  18522287 gaagagggatttttgagtataaccaagaaaaaaggaagatgttttttgaaaattaaattttatggaagg--ataattttgttattttagggtgcaaccag 18522190  T
Q  265 gattaa 270  Q
    ||||||    
T  18522189 gattaa 18522184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 18864556 - 18864453
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||| ||||| ||||||||||||||||  |||| |||||||||| |||||||||||     
T  18864556 gaagagggattttagggtgtaaccaagaaaaaaggaagagtcttttttaaaattaaattttatgaaaggg--taattttgtcattttagggtgcaaccag 18864459  T
Q  265 gattaa 270  Q
    ||||||    
T  18864458 gattaa 18864453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 42437350 - 42437437
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||| ||||  |||||  ||||||||||||||||||||| ||||||    
T  42437350 gtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaaccaggattaa 42437437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 6469947 - 6470004
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  6469947 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactaaggtg 6470004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 12189267 - 12189368
Alignment:
Q  167 agaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatga 266  Q
    ||||| ||||||| ||||||||||||||||||| | | | ||||||||||| |||||||||| |||||  |||| || ||||||||||||| ||||| ||    
T  12189267 agaggagttttggggtgtaaccaagaaagaagggagaggttttttgaaaattaaattttatggaaggg--taattttatcattttggggtgtaaccagga 12189364  T
Q  267 ttaa 270  Q
    ||||    
T  12189365 ttaa 12189368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 13210948 - 13211051
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||| ||  |  |||| ||||||||||  ||||||||||     
T  13210948 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaacag--taattttgtcattttaaggtgcaaccag 13211045  T
Q  265 gattaa 270  Q
    ||||||    
T  13211046 gattaa 13211051  T

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Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 15272728 - 15272831
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| ||| || ||||||||||||||| |||||||||| ||||  ||||| ||| |||||||  |||||||||     
T  15272728 gaagagggattttagggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaagg--ataattttgacattttgaagtgcaaccag 15272825  T
Q  265 gattaa 270  Q
    ||||||    
T  15272826 gattaa 15272831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 4621255 - 4621169
Alignment:
Q  182 tgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||| |||||| |  |||||||||||| ||||||||||||||||  |||| |||||||||| || |||||||| ||||||    
T  4621255 tgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaaggg--taattttgtcattttaggatgcaaccaggattaa 4621169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 19617736 - 19617793
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||||||    
T  19617736 aaattttatgaaagggta--atcttgttattttggggtgcaactatgattaactagggtg 19617793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 29920362 - 29920305
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||||    
T  29920362 aaattttatgaaagggta--atcttgttattttgaggtgcaaccatgattaactagggtg 29920305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 18978560 - 18978473
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| || ||| || |||||||||||| |||||||||  ||||  |||||  ||||||||||||||||||||| ||||||    
T  18978560 gtgtaaccaagaaaaaaagaagatactttttgaaaattaaattttatagaagg--ataattctgtcattttggggtgcaaccaggattaa 18978473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 43548543 - 43548645
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||  |||| ||||||||| || ||| | |||| ||||||||||||||| |||||||||| ||||  |||||  |||||||||||||||||||||     
T  43548543 gaagaggaattttagagtgtaacaaaaaaa-acggaagatgctttttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaaccag 43548639  T
Q  265 gattaa 270  Q
    ||||||    
T  43548640 gattaa 43548645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 261
Target Start/End: Complemental strand, 31498963 - 31498869
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaac 261  Q
    |||||||| |||| | |||||| ||||||| || ||| ||||||||||||||| |||||||||| |||||  |||| |||||||||| | |||||||    
T  31498963 gaagagggattttagggtgtaatcaagaaaaaacgaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttagagtgcaac 31498869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 37340910 - 37340833
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaa 260  Q
    |||||||||| ||| |||||| ||||||||||||||| |||||||||| ||||  |||||  |||||||||||| |||||    
T  37340910 gtgtaaccaaaaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattctgtcattttgggatgcaa 37340833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 6245313 - 6245246
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaag 232  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||||||||| ||||||||||||||    
T  6245313 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaag 6245246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 38768359 - 38768315
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaatttt 225  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||    
T  38768359 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaatttt 38768315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 35319755 - 35319799
Alignment:
Q  188 caagaaagaaggaatatgctttttgaaaatcaaattttatgaaag 232  Q
    |||||||||||||| |   ||||||||||||||||||||||||||    
T  35319755 caagaaagaaggaagagattttttgaaaatcaaattttatgaaag 35319799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 42723996 - 42724264
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42723996 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 42724095  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  42724096 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 42724195  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  42724196 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 42724264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 28406253 - 28406521
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28406253 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 28406352  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||    
T  28406353 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagact 28406452  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  28406453 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 28406521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 39540216 - 39540484
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  39540216 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgtttcgaattttctttgaaatcatgaatggacgtgagaaag 39540315  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  39540316 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 39540415  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  39540416 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 39540484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 52913008 - 52913276
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  52913008 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttacttcgaattttctttgaaatcatgaatggacgtgagaaag 52913107  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  52913108 tatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 52913207  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  52913208 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 52913276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 53874925 - 53875193
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53874925 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 53875024  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||||    |||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||  |||    
T  53875025 tatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatgggct 53875124  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  53875125 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 53875193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 19873937 - 19874205
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19873937 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 19874036  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  19874037 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 19874136  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||| |||||||    
T  19874137 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaagtagggtg 19874205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 20434445 - 20434177
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20434445 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 20434346  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||||||| |||    
T  20434345 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagagttttggggtgtaaccaaaaaagaaggaataggct 20434246  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  20434245 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaagtagggtg 20434177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 37234020 - 37234288
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37234020 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 37234119  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  37234120 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 37234219  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||    
T  37234220 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccataattaactaaggtg 37234288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 42348943 - 42348675
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42348943 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 42348844  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||| |||    
T  42348843 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaataggct 42348744  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  42348743 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttagggtgcaaccatgattaactagggtg 42348675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 55215408 - 55215676
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55215408 gagaacccgtaacaagaaaaacacaatcgattgaataacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 55215507  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  55215508 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 55215607  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  55215608 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 55215676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 278
Target Start/End: Original strand, 10541864 - 10542115
Alignment:
Q  30 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatct 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  10541864 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatct 10541963  T
Q  129 tcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattt 224  Q
    ||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  10541964 tcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaagaaagaatatgctttttgaaaatcaaattt 10542063  T
Q  225 tatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  10542064 tatgaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 10542115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 55220150 - 55219882
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggc-gtgagaaag 111  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||    
T  55220150 gagaacccgtaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttatttgaaatcatgaatggatgtgagaaag 55220051  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  55220050 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 55219951  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  55219950 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 55219882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 56363100 - 56362833
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  56363100 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 56363002  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| | |    
T  56363001 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggtt 56362902  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  56362901 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 56362833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 614105 - 613838
Alignment:
Q  14 agaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagt 112  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  614105 agaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagt 614006  T
Q  113 atggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctt 208  Q
    |||| ||| |||||||||||||||||||    |||||||| |||||||||||||||||||| ||||||||| |||||||||| | |||||||||| ||||    
T  614005 atggttttgaaaatcttcgcagaacacaattgatcgattgcagaattatggttttggaagaagggttttggggtgtaaccaaaagagaaggaataggctt 613906  T
Q  209 tttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||    
T  613905 tttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactggggtg 613838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 12 - 278
Target Start/End: Original strand, 55183341 - 55183610
Alignment:
Q  12 agagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaa 110  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  55183341 agagaacccgtaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaa 55183440  T
Q  111 gtatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 206  Q
    ||||||  || |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||    
T  55183441 gtatggtattgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggc 55183540  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||    
T  55183541 tttttgaaaatcaaattttatgaaagag--taatcttatcattttggggtgcaaccatgattaactagggtg 55183610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 269
Target Start/End: Complemental strand, 25857823 - 25857564
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  25857823 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgaaaaag 25857724  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  25857723 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 25857624  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatta 269  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  25857623 ttttgaaaatcaaattttatgaaaagg--taatcttgtcattttggggtgcaaccatgatta 25857564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 23895009 - 23895278
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  23895009 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttcttcgaaatcatgaatggacgtgagaaag 23895108  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaacc-aagaaagaaggaatatgc 206  Q
    ||||| ||| ||||||||||||||||||||||||    ||||||||||||||||||||||||  |||||||| |||||||| || |||||||||||| ||    
T  23895109 tatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaagaatggttttggggtgtaaccaaaaaaagaaggaataggc 23895208  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  23895209 tttttgaaaatcaaattttatgaaagg--ataatcttgtcattttgggatgcaaccatgattaactagggtg 23895278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 275
Target Start/End: Original strand, 52839547 - 52839812
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52839547 gagaacccataataagaaaaacacaatcgattgaagaacaacacttgataacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 52839646  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||| |||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  52839647 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaatcatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataagct 52839746  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    |||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||    
T  52839747 ttttgaaaatcaaattttatgaaaggg--taattttgtcgttttggggtgcaaccatgattaactagg 52839812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 38291670 - 38291938
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38291670 gagaacccataacaagaaaaacacaatggattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 38291769  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||||| |||    
T  38291770 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttagggtgtaaccaaaaaagaaggaataggct 38291869  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||   |||||||||||||||  |||||||||||||||||||||||||    
T  38291870 ttttgaaaatcaaattttatgaaagg--ttaatcttgtcattttttggtgcaaccatgattaactagggtg 38291938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 52307272 - 52307540
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52307272 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 52307371  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||  |||||||||| ||||||||||||    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||    
T  52307372 tatgattttaaaaatcatcgcagaacacaatcgatcgattggagaattatggttttggaagaggaattttggggtgtaaccaagaaagaaggaataggct 52307471  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||| |||||||||||||||  |||||||| ||||||| || |||||||||||||||||||||||    
T  52307472 ttttgaaaattaaattttatgaaagg--ataatcttatcattttaggatgcaaccatgattaactagggtg 52307540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 53035833 - 53036098
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||| || ||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  53035833 gagaatccgtaacaagaaaaatacaatcgattgaagaacaacatttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 53035932  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||||| |      
T  53035933 tatggttttgaaaatcttcgcagaacacaatcgatcgattggataattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagg-- 53036030  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
     ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  53036031 -tttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 53036098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 141 - 278
Target Start/End: Original strand, 43830165 - 43830300
Alignment:
Q  141 atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataat 240  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||    
T  43830165 atcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaaggg--taat 43830262  T
Q  241 cttgtcattttggggtgcaaccatgattaactagggtg 278  Q
     ||||||||||| |||||||||||||||||||||||||    
T  43830263 attgtcattttgaggtgcaaccatgattaactagggtg 43830300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 43458363 - 43458466
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| || |||||||||||| |||||||||| |||||  |||| |||||||||||||||||||||||    
T  43458363 gaagagggattttagggtgtaaccaagaaaaaaggaagatactttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaaccat 43458460  T
Q  265 gattaa 270  Q
    ||||||    
T  43458461 gattaa 43458466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 11682334 - 11682233
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||| || ||||||| |||||||||||     
T  11682334 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagg--ataattttatcattttagggtgcaaccag 11682237  T
Q  265 gatt 268  Q
    ||||    
T  11682236 gatt 11682233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 268
Target Start/End: Complemental strand, 11690613 - 11690512
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||| || ||||||| |||||||||||     
T  11690613 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagg--ataattttatcattttagggtgcaaccag 11690516  T
Q  265 gatt 268  Q
    ||||    
T  11690515 gatt 11690512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 35339632 - 35339719
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||| |||||  ||||||||||||||| ||||||||||| ||||||    
T  35339632 gtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaaggg--taatcttgtcattttagggtgcaaccaggattaa 35339719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 40430248 - 40430145
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||| ||||||||||||||| |||||||||| |||||  |||| |||||||||| |||||||||||     
T  40430248 gaagagggattttagggtgtaaccaagaaaaaaagaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttagggtgcaaccag 40430151  T
Q  265 gattaa 270  Q
    ||||||    
T  40430150 gattaa 40430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 47467379 - 47467482
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||| ||||  |||||||||| |||||  |||| ||||||||||||| |||||||||    
T  47467379 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttaaaaactaaattttatggaaggg--taattttgtcattttgggatgcaaccat 47467476  T
Q  265 gattaa 270  Q
    ||||||    
T  47467477 gattaa 47467482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 49298 - 49400
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatg 265  Q
    ||||||| |||| | |||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||  |||| |||||||||| | ||||||||| |    
T  49298 aagagggattttagggtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatgaaaggg--taattttgtcattttagagtgcaaccaag 49395  T
Q  266 attaa 270  Q
    |||||    
T  49396 attaa 49400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 20737762 - 20737705
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  20737762 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 20737705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 24034628 - 24034548
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| ||||||||||||||| ||||||    
T  24034628 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtacaacca 24034548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 41202333 - 41202420
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| |||| |||||||||| |||||||||| ||||  |||||  ||||||||||||||||||||| ||||||    
T  41202333 gtgtaaccaagaaaaaaggaagatgcattttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaaccaggattaa 41202420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 51322759 - 51322672
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| ||| || ||||||||||||||| |||||||||||||||  ||||| || |||||||| |||||||||| ||||||    
T  51322759 gtgtaaccaagaaaaaagaaaaatgctttttgaaaattaaattttatgaaagg--ataattttatcattttgaggtgcaaccaagattaa 51322672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 56018719 - 56018773
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  56018719 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagg 56018773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 260
Target Start/End: Complemental strand, 3026507 - 3026414
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaa 260  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| |||||||||| || |||||    
T  3026507 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttaggatgcaa 3026414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 1522909 - 1522806
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| ||| || ||||||||||||||| |||||||||| ||| |  |||| |||||||||| || ||||||||     
T  1522909 gaagagggattttagggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaagag--taattttgtcattttaggatgcaaccag 1522812  T
Q  265 gattaa 270  Q
    ||||||    
T  1522811 gattaa 1522806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 24897109 - 24897008
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatg 265  Q
    |||||||||||||| |||||||| | ||| |||||| | ||||||||||| | |||||||||||||| |||  || |||||||||||||||| ||||| |    
T  24897109 aagaggggttttggggtgtaaccgacaaa-aaggaagaggctttttgaaacttaaattttatgaaagagta--attttgtcattttggggtgtaaccagg 24897013  T
Q  266 attaa 270  Q
    |||||    
T  24897012 attaa 24897008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 270
Target Start/End: Complemental strand, 7318536 - 7318450
Alignment:
Q  183 gtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||| ||| || ||||||||||||||| |||||||||| ||||| ||||| |||| |||||| ||||||| || ||||||    
T  7318536 gtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaaggg-ataattttgtaattttgaggtgcaatcaggattaa 7318450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 30217111 - 30217179
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcatttt 251  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| ||||||||||    
T  30217111 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttgtcatttt 30217179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 13962450 - 13962552
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||  |||||||||||||||  ||||||||| || ||  |||| |||||||||||||||||||| |     
T  13962450 gaagagggattttagggtgtaaccaagaaaaaaggatgatgctttttgaaaat-taattttatggaaagg--taattttgtcattttggggtgcaactag 13962546  T
Q  265 gattaa 270  Q
    ||||||    
T  13962547 gattaa 13962552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 22301719 - 22301819
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    ||||||||||||||| ||||| || |||| ||||||| | ||||||| ||||| ||||||||||||||||||  || |||| |||||||||||||||||     
T  22301719 gaagaggggttttggggtgta-ccgagaa-gaaggaagaggcttttt-aaaattaaattttatgaaagggta--attttgttattttggggtgcaaccag 22301813  T
Q  265 gattaa 270  Q
    ||||||    
T  22301814 gattaa 22301819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 43621562 - 43621649
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||| ||||||||||| ||||||||| |||||  ||||| |||||||||| || ||||| || ||||||    
T  43621562 gtgtaaccaagaaaaaaggaagatgatttttgaaaattaaattttataaaagg--ataattttgtcattttaggatgcaatcaggattaa 43621649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 22847197 - 22847127
Alignment:
Q  198 ggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||| ||||||||||||||| ||||||||||||| |  |||||  ||||||||||||||||||||| ||||||    
T  22847197 ggaagatgctttttgaaaattaaattttatgaaaag--ataattctgtcattttggggtgcaaccaggattaa 22847127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 28803978 - 28804043
Alignment:
Q  203 atgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||||| |||||||||| |||||  |||| |||||||||| |||| |||||||||||||    
T  28803978 atgctttttgaaaattaaattttatggaaggg--taattttgtcattttagggtacaaccatgattaa 28804043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 48990468 - 48990360
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||   |||||||||||||| |||||||||| |||||  |||| || ||||||| ||||||||| |     
T  48990468 gaagagggattttagggtgtaaccaagaaaaaaaga---tgctttttgaaaattaaattttatggaaggg--taattttatcattttagggtgcaacgag 48990374  T
Q  265 gattaactagggtg 278  Q
    |||||| |||||||    
T  48990373 gattaaatagggtg 48990360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 251
Target Start/End: Complemental strand, 34159136 - 34159052
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcatttt 251  Q
    |||||||| |||| | |||||||||||||| || ||| ||||||||||||||| |||||||||  ||||  ||||| ||||||||||    
T  34159136 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatagaagg--ataattttgtcatttt 34159052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 36851531 - 36851460
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||| |||| | ||||||| |||||| |||||| |  |||||||||||| ||||||||||||||||||    
T  36851531 gaagagggattttagggtgtaactaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagggta 36851460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 8713343 - 8713247
Alignment:
Q  169 aggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatt 268  Q
    ||||||||||| |||||||| |||| ||||||| | ||||||| ||||| ||||||||||||||||  |||| |||||||||||||||| ||| | ||||    
T  8713343 aggggttttgg-gtgtaaccgagaa-gaaggaagaggcttttt-aaaattaaattttatgaaaggg--taattttgtcattttggggtgtaacaaggatt 8713249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 50561673 - 50561587
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| ||| || |||||||||||||||  ||||||||| |||||  |||| |||||||||| | ||||||||| ||||||    
T  50561673 gtgtaaccaagaaaaaagaaagatgctttttgaaaat-taattttatggaaggg--taattttgtcattttagagtgcaaccaggattaa 50561587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 20293267 - 20293328
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaatttta 226  Q
    |||||||| |||| | |||||||||||||| |||||| |||| |||||||||| ||||||||    
T  20293267 gaagagggattttagggtgtaaccaagaaaaaaggaagatgcattttgaaaattaaatttta 20293328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 31709787 - 31709730
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||| |||||  ||||||||||||||||  ||||||||||||||||| |||||||    
T  31709787 aaattttataaaagg--ataatcttgtcattttaaggtgcaaccatgattaattagggtg 31709730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 32932694 - 32932614
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| || ||| ||||||||| ||||| |||||||||||||   | |||| ||||||||||| | ||||||||    
T  32932694 gtgtaaccaagaaaaaaagaagatgcttttttaaaattaaattttatgaaa--atgtaattttgtcattttgagatgcaacca 32932614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 45505587 - 45505855
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45505587 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 45505686  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  45505687 tatggttttaaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 45505786  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  45505787 ttttgaaaattaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 45505855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 1482094 - 1481826
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  1482094 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaaa 1481995  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  1481994 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 1481895  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  1481894 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 1481826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 25853234 - 25853502
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  25853234 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgaaaaag 25853333  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  25853334 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 25853433  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  25853434 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 25853502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 39697579 - 39697847
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  39697579 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttctaattttctttgaaatcatgaatggacgtgagaaag 39697678  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  39697679 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatatgct 39697778  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  39697779 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaactatgattaactagggtg 39697847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 1520459 - 1520191
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1520459 gagaacccataacaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 1520360  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  1520359 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 1520260  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  1520259 ttttgaaaatcaaattttatgaaaggg--taatcttatcattttggggtgcaaccatgattaactagggtg 1520191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 43577286 - 43577018
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43577286 gagaacccataacaagaaaaacacaatcgattcaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 43577187  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  43577186 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 43577087  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  43577086 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagggtg 43577018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 44143643 - 44143375
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  44143643 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcaaattttctttgaaatcatgaatggacgtgagaaag 44143544  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||| ||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  44143543 tatggttttgaaaatcttcgcataacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 44143444  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  44143443 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 44143375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 2390489 - 2390756
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2390489 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 2390587  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  2390588 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 2390687  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  2390688 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttagggtgcaaccatgattaactagggtg 2390756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 34202562 - 34202294
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  34202562 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaaa 34202463  T
Q  112 tatggatttaaaaatcttcgcagaaca----caatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||    ||||||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| |||    
T  34202462 tatggttttgaaaatcttcgcagaacacaatcaatcgattggagaattatggtttttgaagaagggttttggggtgtaaccaaaaaagaaggaataggct 34202363  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  34202362 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgtaaccatgattaactagggtg 34202294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 10639060 - 10638793
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  10639060 gagaacccataagaagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttaaaaccatgaatggacgtgagaaag 10638961  T
Q  112 tatggatttaaaaatcttcgcagaaca----caatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||| ||||    | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  10638960 tatggttttgaaaatcttcgcataacagaatcgatcgattggagaattatggttttggaagagggg-tttggggtgtaaccaagaaagaaggaatatgct 10638862  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  10638861 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagggtg 10638793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 21658209 - 21657942
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21658209 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 21658111  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||| | ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  21658110 tatagttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 21658011  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  21658010 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttagggtgcaaccatgattaactagggtg 21657942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 40811575 - 40811842
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  40811575 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcaaattttctttgaaatcatgaatggacgtgagaaag 40811673  T
Q  112 tatggatttaaaaatcttcgcagaacacaatc----gattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||    |||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  40811674 tatggttttgaaaatcttcgcagaacacaatctatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 40811773  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  40811774 ttttgaaaatcaaattttatgaaagg--ataatcttttcattttggggtgcaaccatgattaactagggtg 40811842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 42343250 - 42342983
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42343250 gagaacccataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 42343152  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    |||||||||||||||||| |||| ||||||||| |||||||||| |||||||||||| |||    
T  42343151 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgaaagaagggttttggggtgtaaccaaaaaagaaggaataggct 42343052  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  42343051 ttttgaaaatcaaattttatgaaagg--ataatcttatcattttggggtgcaaccatgattaactagggtg 42342983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 3178503 - 3178241
Alignment:
Q  19 ccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatgga 117  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  3178503 ccataacaagaaaaacacaatcgattgaagaacaacacttgttaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggt 3178404  T
Q  118 tttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttga 213  Q
    ||| |||||||||||||||||||||||||    ||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||| |||||||||    
T  3178403 tttgaaaatcttcgcagaacacaatcgatcgattggagaattatggctttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttga 3178304  T
Q  214 aaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||  ||||||| ||||||| ||||||||||||||||||||||||||    
T  3178303 aaatcaaattttatgaaaggg--taatcttatcattttagggtgcaaccatgattaactagggtg 3178241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 13195940 - 13196207
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  13195940 gagaactcataacaagaaaa-cacaatcgattgaagaacaacacttgctaacctgatttgcttcaaattttctttgaaatcatgaatagacgtgagaaag 13196038  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||  |||||||||||| |||    
T  13196039 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccacaaaagaaggaataggct 13196138  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  13196139 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 13196207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 274
Target Start/End: Complemental strand, 37094371 - 37094107
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37094371 gagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 37094272  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||| ||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  37094271 tatggttttgaaaatctttgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 37094172  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactag 274  Q
    |||||||||||||||||||||||| |  |||||||| |||||||||  |||||||||||||||||||    
T  37094171 ttttgaaaatcaaattttatgaaaag--ataatcttatcattttggtatgcaaccatgattaactag 37094107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 927327 - 927079
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  927327 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 927228  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||              |||||||| |||||      |||||||||||| |||    
T  927227 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattat--------------ggttttggggtgta------aaagaaggaataggct 927148  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  927147 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 112 - 278
Target Start/End: Complemental strand, 15012002 - 15011834
Alignment:
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  15012002 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 15011903  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  15011902 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 15011834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 875154 - 874953
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||    
T  875154 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgctttgaattttctttgaaatcgtgaatggacgtgagagag 875055  T
Q  112 tatggatttaaaaatcttcgcagaacacaatc----gattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    |||             |||||||||||| |||    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||    
T  875054 tat-------------ttcgcagaacacgatcgattgattggagaattatggttttggaagaggggttttggggtgtaaccaagaaataaggaataggct 874968  T
Q  208 ttttgaaaatcaaat 222  Q
    |||||||||||||||    
T  874967 ttttgaaaatcaaat 874953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 13480508 - 13480611
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||  |||| ||||||||||  ||||||| ||     
T  13480508 gaagagggattttagggtgtaaccaagaaaaaaggaaaatgctttttgaaaattaaattttatgaaaggg--taattttgtcattttaaggtgcaatcag 13480605  T
Q  265 gattaa 270  Q
    ||||||    
T  13480606 gattaa 13480611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 278
Target Start/End: Original strand, 32551681 - 32551737
Alignment:
Q  220 aattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32551681 aattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 32551737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 26171101 - 26170999
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatg 265  Q
    ||||||| |||| | |||||||||||||| ||  || ||||||||||||||| |||||||||| |||||  |||| |||| ||||||||||||||||| |    
T  26171101 aagagggattttagggtgtaaccaagaaaaaaaaaagatgctttttgaaaattaaattttatggaaggg--taattttgttattttggggtgcaaccaag 26171004  T
Q  266 attaa 270  Q
    |||||    
T  26171003 attaa 26170999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 220 - 278
Target Start/End: Complemental strand, 35895563 - 35895507
Alignment:
Q  220 aattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  35895563 aattttatgaaagggta--atcttgtcattttggagtgcaaccatgattaactagggtg 35895507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 44456787 - 44456842
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  44456787 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagggta 44456842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 4331840 - 4331943
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| ||||||    |||||||||||| ||||||||||||||||  |||| |||||||||| || ||||||||     
T  4331840 gaagagggattttagggtgtaaccaagaaaaaaggaagtgtctttttgaaaattaaattttatgaaaggg--taattttgtcattttaggatgcaaccag 4331937  T
Q  265 gattaa 270  Q
    ||||||    
T  4331938 gattaa 4331943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 38629368 - 38629471
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||||||||| |||||||||||||||  ||||| || ||||||| || ||||||||     
T  38629368 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaagg--ataattttatcattttaggatgcaaccag 38629465  T
Q  265 gattaa 270  Q
    ||||||    
T  38629466 gattaa 38629471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 31569635 - 31569708
Alignment:
Q  182 tgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtg 257  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| |||||||||| |||||    
T  31569635 tgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttgtcattttagggtg 31569708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 7722648 - 7722728
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||| |||||||||| |||| |||||||||| |||||  |||| || |||||||| ||||||||||    
T  7722648 gtgtaaccaagaaaaaaggaagatgctttttgtaaattaaattttatggaaggg--taattttatcattttgaggtgcaacca 7722728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 45443516 - 45443585
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||||||||| |||||||| ||||| || ||| | ||||||||||||| ||||||||||||||||||    
T  45443516 aagaggggttttggggtgtaaccgagaaa-aatgaagaggctttttgaaaattaaattttatgaaagggta 45443585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 27980924 - 27980978
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||| ||||    
T  27980924 aaattttatgaaagg--ataatcttgtcattttggggtgtaaccatgattaagtagg 27980978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 28067454 - 28067508
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    |||||||||||||||  |||||||||||||||||||||| |||||||||||| ||||    
T  28067454 aaattttatgaaagg--ataatcttgtcattttggggtgtaaccatgattaagtagg 28067508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 44798933 - 44798832
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatg 265  Q
    |||||||||||||| |||||||| ||||| |||||| | ||||||||||| | |||||||||||||| |  |||| |||||||||||  ||| ||||| |    
T  44798933 aagaggggttttggggtgtaaccgagaaa-aaggaagaggctttttgaaacttaaattttatgaaagag--taattttgtcattttgaagtgtaaccagg 44798837  T
Q  266 attaa 270  Q
    |||||    
T  44798836 attaa 44798832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 458584 - 458630
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttat 227  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||    
T  458584 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttat 458630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 16313558 - 16313609
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaag 232  Q
    |||||| ||||||| |||||| ||||||||||||||| ||||||||| ||||    
T  16313558 gtgtaagcaagaaaaaaggaagatgctttttgaaaattaaattttataaaag 16313609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 34270574 - 34270842
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34270574 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 34270673  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  34270674 tatggtttttaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 34270773  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  34270774 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 34270842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 39569256 - 39569524
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39569256 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 39569355  T
Q  112 tatggatttaaaaatcttcgcagaaca----caatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||    | ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  39569356 tatggttttgaaaatcttcgcagaacacgatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 39569455  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  39569456 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 39569524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 52044190 - 52044458
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52044190 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 52044289  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  52044290 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 52044389  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  52044390 ttttgaaaatcaaattttatgaaaggg--taatcttatcattttggggtgcaaccatgattaactagggtg 52044458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 44722154 - 44721886
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44722154 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 44722055  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||| ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  44722054 tatggttttgaaaatcttcgcagaacacaatcgatcgattagagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 44721955  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  44721954 ttttgaaaatcaaattttatgaaaggg--taatcttatcattttggggtgcaaccatgattaactagggtg 44721886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 52025008 - 52024740
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  52025008 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacatgagaaag 52024909  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  52024908 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 52024809  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  52024808 ttttgaaaatcaaattttatgaaaggg--taatcctgtcattttggggtgcaaccatgattaactagggtg 52024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 42948473 - 42948204
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgatt-gaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaa 110  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42948473 gagaacccataacaagaaaaacacaatcgatttgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaa 42948374  T
Q  111 gtatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 206  Q
    |||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||    
T  42948373 gtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggc 42948274  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  42948273 tttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagggtg 42948204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 6653507 - 6653239
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6653507 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 6653408  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||| |||||||||| | ||||||| |||||||||| |||||||||||| |||    
T  6653407 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatgattttggaagaagagttttggggtgtaaccaaaaaagaaggaataggct 6653308  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  6653307 ttttgaaagtcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 6653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 26150966 - 26151234
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26150966 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 26151065  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    |||||||||||||||||||||||| |||| | ||||| | |||||||||| ||||||||||||||||    
T  26151066 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttgaaagaagagttttagggtgtaaccaaaaaagaaggaatatgct 26151165  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  26151166 ttttgaaaatcaaattttatgaaagg--ataatcttatcattttggggtgcaaccatgattaactagggtg 26151234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 278
Target Start/End: Complemental strand, 40400299 - 40400048
Alignment:
Q  30 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatct 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| |||||||    
T  40400299 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcctgaatggacgtgagaaagtatggttttgaaaatct 40400200  T
Q  129 tcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattt 224  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  40400199 tcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaaattt 40400100  T
Q  225 tatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  40400099 tatgaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 40400048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 20581781 - 20581514
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  20581781 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacataatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 20581682  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||| ||||||||    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||    
T  20581681 tatggttttgaaaatcttcgaagaacacaatcgatcgattggagaattatggttttggaagaggggttttgg-gtgtaaccaaaaaagaaggaataggct 20581583  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  20581582 ttttgaaaatcaaattttatgaaaggg--taattttgtcattttggggtgcaaccatgattaactagggtg 20581514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 33010603 - 33010855
Alignment:
Q  29 aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatc 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  33010603 aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatc 33010702  T
Q  128 ttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaatt 223  Q
    |||||| ||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  33010703 ttcgcaaaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaatt 33010802  T
Q  224 ttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  33010803 ttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 33010855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 18909498 - 18909230
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  18909498 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaaa 18909399  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||| |||    
T  18909398 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaagaataggct 18909299  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||  |||||||||||||||||||||||    
T  18909298 ttttgaaaatcaaattttatgaaaggg--taatattgtcattttggaatgcaaccatgattaactagggtg 18909230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 24317462 - 24317196
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24317462 gagaacccataacaagaaaa-cataatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 24317364  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  24317363 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatgg-tttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 24317265  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  24317264 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 24317196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 50728080 - 50727812
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50728080 gagaacccacaacaagaaaaacacaatcaattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 50727981  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||  ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| ||||||| || ||| |||||||| |||    
T  50727980 tatgattttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaacaaaaaaaaaaggaataggct 50727881  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  50727880 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 50727812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 2482430 - 2482701
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-----cgtgag 107  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     ||||||    
T  2482430 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattt-ctttgaaatcatgaatggacggacgtgag 2482528  T
Q  108 aaagtatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaata 203  Q
    ||||||||| ||| |||||||| ||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  2482529 aaagtatggttttgaaaatctttgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaata 2482628  T
Q  204 tgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
     ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  2482629 ggctttttgaaaatcaaattttatgaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 2482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 2138046 - 2138310
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatg-gcgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  2138046 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaag 2138145  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||    ||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||| | |    
T  2138146 tatggttttgaaaatcttcgcagaacacaatcgatcaattggagaattatagttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggtt 2138245  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactag 274  Q
    |||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||||||||||||    
T  2138246 ttttgaaaatcaaattttatgaaaggg--taatcttatcattttgaggtgcaaccatgattaactag 2138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 13942426 - 13942158
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||    
T  13942426 gagaacccataataagaaaaacacaatcgagtgaagaacaacacttgctaacctgatttgctttaaattttctttgaaatcatgaatggacgtgagaaag 13942327  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||| | ||||||||||||    ||||||||||||||||||||||| | ||||||| |||||||||| |||||||||||| |||    
T  13942326 tatggttttgaaaatcttcgaaaaacacaatcgatcgattggagaattatggttttggaagaagagttttggggtgtaaccaaaaaagaaggaataggct 13942227  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||    
T  13942226 ttttgaaaatcaaattttatgaaagg--ataatcttgtcattttggggtgcaaccatgattaaatagggtg 13942158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 51677049 - 51677317
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51677049 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgttaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 51677148  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcga----ttggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||||||||||||    |||||||||||||||||||||||| | ||||||| |||||||||| |||||||||||| |||    
T  51677149 tatggttttgaaaatcttcgcagaacacaatcgatcggttggagaattatggttttggaagaagagttttggggtgtaaccaaaaaagaaggaataggct 51677248  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||| ||||||||||||||||||||  |||||||||||||||| |  |||||| ||||||||||||||||    
T  51677249 ttttgtaaatcaaattttatgaaagg--ataatcttgtcattttagaatgcaactatgattaactagggtg 51677317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 49 - 278
Target Start/End: Complemental strand, 15933033 - 15932801
Alignment:
Q  49 aacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcgat- 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||     
T  15933033 aacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggtttttaaaatcttcgcagaacacaatcgatc 15932934  T
Q  147 ---tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatctt 243  Q
       ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  15932933 gattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaagg--ataatctt 15932836  T
Q  244 gtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||||||||||    
T  15932835 gtcattttggggtgcaaccatgattaactagggtg 15932801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 52 - 278
Target Start/End: Complemental strand, 49823448 - 49823219
Alignment:
Q  52 aacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcgat---- 146  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||        
T  49823448 aacacttgctaacctgatttacttcgaattttctttgaaatcatgaatggacgtgaaaaagtatggttttgaaaatcttcgcagaacacaatcgatcgat 49823349  T
Q  147 tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtc 246  Q
    |||||||||||||||| |||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||    
T  49823348 tggagaattatggtttcggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttataaaaggg--taatcttgtc 49823251  T
Q  247 attttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||| |||||||    
T  49823250 attttggggtgcaaccatgattaattagggtg 49823219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 84 - 275
Target Start/End: Original strand, 28852791 - 28852985
Alignment:
Q  84 ctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttg 178  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    ||||||||||||| ||||||||||| ||||||||    
T  28852791 ctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatagttttggaagaagggttttg 28852890  T
Q  179 gagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    | |||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||    
T  28852891 gggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagg 28852985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 13240207 - 13240288
Alignment:
Q  195 gaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||  || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  13240207 gaaggaatagactctttgaaaatcaaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 13240288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 40498727 - 40498647
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||    
T  40498727 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaaggg--taattttgtcattttggggtgcaacca 40498647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 23444319 - 23444413
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||| |||||| |||||||| |||||| |||||||||||||||  ||||| |||||||| ||||||||||||| |||||| |||||||    
T  23444319 gtgtaaccaagaaaaaaggaagatgctttt-gaaaattaaattttatgaaagg--ataattttgtcattgtggggtgcaaccaagattaaatagggtg 23444413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 29922183 - 29922286
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| |  |||||||||||| ||||||||||||||||  |||| |||||||||| |||||||||||     
T  29922183 gaagagggattttagggtgtaaccaagaaaaaaggaagagtctttttgaaaattaaattttatgaaaggg--taattttgtcattttagggtgcaaccag 29922280  T
Q  265 gattaa 270  Q
    ||||||    
T  29922281 gattaa 29922286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 41712870 - 41712783
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  |||||  ||||||||||||||||||||| ||||||    
T  41712870 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaaccaggattaa 41712783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 51002006 - 51002093
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||||||  ||||| |||||||||| |||||||| || ||||||    
T  51002006 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatgaaagg--ataattttgtcattttagggtgcaatcaggattaa 51002093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 51776155 - 51776052
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||| ||||| |||||||||| |||||  |||| ||||||||||||| ||||||||     
T  51776155 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatggaaggg--taattttgtcattttgggatgcaaccag 51776058  T
Q  265 gattaa 270  Q
    ||||||    
T  51776057 gattaa 51776052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 5673013 - 5672915
Alignment:
Q  169 aggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatt 268  Q
    |||| |||| |||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| |||||||||| || |||||||| ||||    
T  5673013 agggattttagagtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttaggatgcaaccaggatt 5672916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 17605853 - 17605751
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||| || ||  |||| |||||||||| |||||||||||     
T  17605853 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaagg--taattttgtcattttagggtgcaaccag 17605756  T
Q  265 gatta 269  Q
    |||||    
T  17605755 gatta 17605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 11173512 - 11173569
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  11173512 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 11173569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 14247457 - 14247514
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  14247457 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 14247514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 39982335 - 39982278
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  39982335 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 39982278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 51290621 - 51290564
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  51290621 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 51290564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 14290252 - 14290355
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| ||| || ||||||||||||||| |||||||||| |||||  |||| ||||||||||  ||||||||||     
T  14290252 gaagagggattttagggtgtaaccaagaaaaaagaaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttaaggtgcaaccag 14290349  T
Q  265 gattaa 270  Q
    ||||||    
T  14290350 gattaa 14290355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 17474774 - 17474687
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| || |||||||||||| |||||||||||||||  ||||| |||||||||| || |||||||| ||||||    
T  17474774 gtgtaaccaagaaaaaaggaagattctttttgaaaattaaattttatgaaagg--ataattttgtcattttaggatgcaaccaggattaa 17474687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 26307956 - 26307869
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  ||||| ||||||||||  |||||||||| ||||||    
T  26307956 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattttgtcattttaaggtgcaaccaagattaa 26307869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 40536800 - 40536857
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  40536800 aaattttatgaaagggta--atcttgtcattttgaggtgcaaccatgattaactagggtg 40536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 13240166 - 13240209
Alignment:
Q  55 acttgctaacctgatttgcttcgaattttctttgaaatcatgaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13240166 acttgctaacctgatttgcttcgaattttctttgaaatcatgaa 13240209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 8114879 - 8114966
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||| || ||||  ||||| |||||||||| ||||||||||| ||||||    
T  8114879 gtgtaaccaagaaaaaaagaagatgctttttgaaaattaaattttctggaagg--ataattttgtcattttagggtgcaaccaggattaa 8114966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 32086592 - 32086505
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| |||| |||||||||| |||||||||| ||||  |||||  |||||||||||||||||| || ||||||    
T  32086592 gtgtaaccaagaaaaaaggaagatgccttttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaatcaggattaa 32086505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 35273935 - 35273849
Alignment:
Q  182 tgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  |||||  ||||||||| || |||||||| ||||||    
T  35273935 tgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattctgtcattttaggatgcaaccaggattaa 35273849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 9640866 - 9640951
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatt 268  Q
    |||||||||||||| || ||| ||||||||||||||| ||||||||| ||||||  |||| |||||||||| || |||||||| ||||    
T  9640866 gtgtaaccaagaaaaaaagaagatgctttttgaaaattaaattttataaaaggg--taattttgtcattttaggatgcaaccaggatt 9640951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 13146131 - 13146045
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| |||||||||||||||  ||||||||| ||| |  |||| |||||||||| ||||||||||| ||||||    
T  13146131 gtgtaaccaagaaaaaaggaagatgctttttgaaaat-taattttatggaagag--taattttgtcattttagggtgcaaccaggattaa 13146045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 19247752 - 19247839
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| || ||||||| || |||||||| ||||||    
T  19247752 gtgtaatcaagaaaaaaggaagatgctttttgaaaataaaattttatggaaggg--taattttatcattttaggatgcaaccaggattaa 19247839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 7009131 - 7009031
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    ||||||||||||||| ||||| | ||  ||||||||| | ||||||| ||||| ||||||||||||||||  |||| |||| ||||||||||| |||||     
T  7009131 gaagaggggttttggggtgtaccgaa--aagaaggaagaggcttttt-aaaattaaattttatgaaaggg--taattttgttattttggggtgtaaccag 7009037  T
Q  265 gattaa 270  Q
    ||||||    
T  7009036 gattaa 7009031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 19514111 - 19514158
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatg 228  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  19514111 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatg 19514158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 12601963 - 12601893
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttgg 253  Q
    |||||||||| ||| |||||| ||||||||||||||| |||||||||| ||  | ||||| ||||||||||||    
T  12601963 gtgtaaccaaaaaaaaaggaagatgctttttgaaaattaaattttatggaa--gaataattttgtcattttgg 12601893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 24527597 - 24527665
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    ||||||||||||||| ||||||| |   ||||||||| ||||||||| ||||| ||||||||||||| ||||    
T  24527597 gaagaggggttttggggtgtaacga--gaagaaggaagatgcttttt-aaaattaaattttatgaaatggta 24527665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 4158 - 3890
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4158 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 4059  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||| |||    
T  4058 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaataggct 3959  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3958 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 8376523 - 8376255
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8376523 gagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 8376424  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  ||    
T  8376423 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagact 8376324  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  8376323 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 8376255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 26122326 - 26122594
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  26122326 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaat 26122425  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  26122426 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatatgct 26122525  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  26122526 ttttgaaaatcaaattttatgaaaggg--taatcttatcattttggggtgcaaccatgattaactagggtg 26122594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 23357057 - 23357325
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatg-gcgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  23357057 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaag 23357156  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  23357157 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 23357256  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||    
T  23357257 ttttgaaaatcaaattttatgaaaagg--taatcttgtcattttggggtgcaaccatgattaactagggtg 23357325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 5988458 - 5988203
Alignment:
Q  26 aagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaa 124  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  5988458 aagaaaaacacaattgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaa 5988359  T
Q  125 atcttcgcagaacacaatc----gattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaa 220  Q
    |||||||||||||||||||    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  5988358 atcttcgcagaacacaatcaatcgattggagaattatggttttggaagaggggttttgggatgtaaccaagaaagaaggaatatgctttttgaaaatcaa 5988259  T
Q  221 attttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  5988258 attttatgaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 5988203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 43664126 - 43664393
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43664126 gagaacccacaacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 43664225  T
Q  112 tatggatttaaaaatcttcgcagaacaca---atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctt 208  Q
    ||||| ||| |||||||||||||||||||   ||| ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||    
T  43664226 tatggttttgaaaatcttcgcagaacacaatcatcaattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctt 43664325  T
Q  209 tttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  43664326 tttgaaaatcaaattttatgaaaggg--taatcttgtcattttgaggtgcaaccatgattaactagggtg 43664393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 24822524 - 24822792
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  24822524 gagaacccataaaaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaat 24822623  T
Q  112 tatggatttaaaaatcttcgcagaaca----caatcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||    | |||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||||| |||    
T  24822624 tatggttttgaaaatcttcgcagaacaccatcgatcgattggagaattatggttttggaagaatggttttggggtgtaaccaaaaaagaaggaataggct 24822723  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  24822724 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 24822792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 30 - 278
Target Start/End: Original strand, 3137042 - 3137293
Alignment:
Q  30 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatct 128  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  3137042 aaaacacaatcgattgaagaacaagacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatct 3137141  T
Q  129 tcgcagaacacaatcgatt----ggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattt 224  Q
    |||||||||||||||||||    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3137142 tcgcagaacacaatcgattgattggagaattatggttttcgaagaggggttttggggtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattt 3137241  T
Q  225 tatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  3137242 tatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactacggtg 3137293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 35605620 - 35605352
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  35605620 gagaactcataacaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacatgagaaag 35605521  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||| ||||    ||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  35605520 tatggttttgaaaatcttcgcagagcacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 35605421  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  35605420 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttgaggtgcaaccatgattaactagggtg 35605352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 39365528 - 39365261
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39365528 gagaacccataacaagaaaa-cacagtcaattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 39365430  T
Q  112 tatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  39365429 tatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 39365330  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  39365329 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 39365261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 275
Target Start/End: Complemental strand, 42512442 - 42512177
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  42512442 gagaacccataacaagaaaaacacaatcgattgaagaacaacacttgctaacttgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 42512343  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||| ||||||||    |||||||||||||||||  |||||||||||||||||||| |||||||||| |||||||||||| |||    
T  42512342 tatggttttgaaaatcttcggagaacacaatcgatcgattggagaattataattttggaagaggggttttggggtgtaaccaaaaaagaaggaataggct 42512243  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagg 275  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  42512242 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttgggatgcaaccatgattaactagg 42512177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 26290579 - 26290847
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26290579 gagaacccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 26290678  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||| |||||||||||    ||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||  |||    
T  26290679 tatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggct 26290778  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  26290779 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 26290847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 26303836 - 26304104
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26303836 gagaacccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 26303935  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||| |||||||||||    ||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||  |||    
T  26303936 tatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggct 26304035  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  26304036 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 26304104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 34564829 - 34565097
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34564829 gagaacccataacaaaaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 34564928  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||||||||||| |||    |||||||||||||||||| |||||||||| ||||||||| ||||||| || |||||||||||| |||    
T  34564929 tatggttttgaaaatcttcgcagaatacaatcgatcgattggagaattatgattttggaagaagggttttggggtgtaacaaaaaaagaaggaataggct 34565028  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||    
T  34565029 ttttgaaaatcaaattttataaaagg--ataatcttgtcattttggggtgcaaccatgattaactagggtg 34565097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 26337191 - 26337459
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26337191 gagaatccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 26337290  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||| |||||||||||    ||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||  |||    
T  26337291 tatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggct 26337390  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  26337391 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 26337459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 30 - 278
Target Start/End: Original strand, 3032715 - 3032966
Alignment:
Q  30 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatct 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| |||||||    
T  3032715 aaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgaacgtgagaaagtatggttttgaaaatct 3032814  T
Q  129 tcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattt 224  Q
    ||||||||||||||||    ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |||| |||||||||||||||||| |    
T  3032815 tcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaagaaataggctttttgaaaatcaaatgt 3032914  T
Q  225 tatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3032915 tatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 3032966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 17122347 - 17122105
Alignment:
Q  39 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaac 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  17122347 tcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaac 17122248  T
Q  138 acaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagg 233  Q
    |||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  17122247 acaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaagg 17122148  T
Q  234 gtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |  ||||||||| ||||||||||||||||||||||||||||||||    
T  17122147 g--taatcttgttattttggggtgcaaccatgattaactagggtg 17122105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 43 - 278
Target Start/End: Complemental strand, 34917791 - 34917553
Alignment:
Q  43 ttgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaa 141  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  34917791 ttgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaa 34917692  T
Q  142 t----cgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtat 237  Q
    |    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||||||  |    
T  34917691 ttgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatgaaaggg--t 34917594  T
Q  238 aatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  34917593 aatcttgtcattttggggtgcatccatgattaactagggtg 34917553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 35 - 278
Target Start/End: Complemental strand, 8656815 - 8656569
Alignment:
Q  35 acaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgca 133  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  8656815 acaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgca 8656716  T
Q  134 gaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatga 229  Q
    |||||||||||||    ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  8656715 gaacacaatcgatcgattggagaattatggttttggaataagggttttggggtgtaaccaaaaaagaaggaatagactttttgaaaatcaaattttatga 8656616  T
Q  230 aagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||   ||||||||||||||| || |||||||||||||||||||||||    
T  8656615 aagg--ttaatcttgtcatttttggttgcaaccatgattaactagggtg 8656569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 74 - 275
Target Start/End: Original strand, 22439467 - 22439671
Alignment:
Q  74 ttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaag 168  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||    
T  22439467 ttcgaattttctttgaaatcatgaatggacgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaag 22439566  T
Q  169 aggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgatt 268  Q
    | ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||||||    
T  22439567 aagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaaggg--taatcttgtcattttgaggtgtaaccatgatt 22439664  T
Q  269 aactagg 275  Q
    |||||||    
T  22439665 aactagg 22439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 12722682 - 12722579
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| || ||| ||||||||||||||| |||||||||| |||||  |||| ||||||||||||||||||||||     
T  12722682 gaagagggattttagggtgtaaccaagaaaaaatgaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaaccag 12722585  T
Q  265 gattaa 270  Q
    ||||||    
T  12722584 gattaa 12722579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 31793823 - 31793910
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  31793823 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaaggg--taattttgtcattttggggtgcaaccaggattaa 31793910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 2828154 - 2828232
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 93  Q
    |||||||| | |||||||||||||||||| ||||||||  ||||| |||||| ||||||||||||||||||||||||||    
T  2828154 gaacccatgacaagaaaaacacaatcgatcgaagaacacaacttgttaaccttatttgcttcgaattttctttgaaatc 2828232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 41942319 - 41942422
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| ||| || ||||||||||||||| |||||||||| ||||  ||||| ||||||||||||| ||||||||     
T  41942319 gaagagggattttagggtgtaaccaagaaaaaagtaagatgctttttgaaaattaaattttatggaagg--ataattttgtcattttgggatgcaaccag 41942416  T
Q  265 gattaa 270  Q
    ||||||    
T  41942417 gattaa 41942422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 42687915 - 42688002
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||||||||| ||||| |||||||||| |||||  |||| |||||||||||||||||||||| ||||||    
T  42687915 gtgtaaccaagaaaaaaggaagatgctttttaaaaattaaattttatggaaggg--taattttgtcattttggggtgcaaccaagattaa 42688002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 15839527 - 15839470
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  15839527 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 15839470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 28885723 - 28885780
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  28885723 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 28885780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 28909734 - 28909677
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  28909734 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactagggtg 28909677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 36057706 - 36057786
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||  |||||  |||||||||||||||||||||    
T  36057706 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagg--ataattctgtcattttggggtgcaacca 36057786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 38168459 - 38168539
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||||  |||| || ||||||||| |||||||||    
T  38168459 gtgtaaccaagaaaaaaggaatatgctttttgaaaattaaattttatggaaggg--taattttatcattttggagtgcaacca 38168539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 11266259 - 11266156
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| |||||||||  ||| |  ||||||| |||||||| ||||||||||     
T  11266259 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatagaagag--taatcttatcattttgaggtgcaaccag 11266162  T
Q  265 gattaa 270  Q
    ||||||    
T  11266161 gattaa 11266156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 12713578 - 12713645
Alignment:
Q  209 tttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||| ||| ||||  || |||||||||||||||||||||||||||||||||||||    
T  12713578 tttgaaaatcaaattttataaaaaggta--atattgtcattttggggtgcaaccatgattaactagggtg 12713645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 8013936 - 8013993
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  8013936 aaattttatgaaagggta--atcttgtcattttggagtgcaaccatgattaactagggtg 8013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 11587970 - 11587913
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  11587970 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaattagggtg 11587913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 17601406 - 17601349
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  17601406 aaattttatgaaagggta--atcttgtcattttggggtgcaaccatgattaactaaggtg 17601349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 37578055 - 37577998
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  37578055 aaattttatgaaagggta--atcttgtcattttggagtgcaaccatgattaactagggtg 37577998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 38945811 - 38945711
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||  |||| |||||||||||||||| |||||   |||||||||||||| |||||||||| ||||  ||||| |||||||||| |||||||||||     
T  38945811 gaagaggaattttagagtgtaaccaagaaaaaagga---tgctttttgaaaattaaattttatggaagg--ataattttgtcattttagggtgcaaccag 38945717  T
Q  265 gattaa 270  Q
    ||||||    
T  38945716 gattaa 38945711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 5599872 - 5599929
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||    
T  5599872 aaattttatgaaagggta--atcttgtcattttggaatgcaaccatgattaactagggtg 5599929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 5640748 - 5640691
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||    
T  5640748 aaattttatgaaagggta--atcttgtcattttggaatgcaaccatgattaactagggtg 5640691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Complemental strand, 4005891 - 4005820
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||| |||| | || ||||||||||| |||||| ||||||||||||||| |||||||||| |||||||    
T  4005891 gaagagggattttagggtataaccaagaaaaaaggaagatgctttttgaaaattaaattttatggaagggta 4005820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 7969872 - 7969938
Alignment:
Q  27 agaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatc 93  Q
    ||||||||| ||||||||||||||||  |||| ||||||| || | |||||||||||||||||||||    
T  7969872 agaaaaacataatcgattgaagaacacaacttactaacctcatctccttcgaattttctttgaaatc 7969938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 38234543 - 38234432
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| ||||  ||||||||||||||| ||| || ||||||||| ||||| |||||||||| ||||  || || |||||||||||  |||||| ||     
T  38234543 gaagagggattttatagtgtaaccaagaaaaaagaaagatgctttttaaaaattaaattttatggaagg--atcattttgtcattttgaagtgcaaacag 38234446  T
Q  265 gattaactagggtg 278  Q
    |||||| |||||||    
T  38234445 gattaaatagggtg 38234432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 257
Target Start/End: Original strand, 7969992 - 7970081
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtg 257  Q
    ||||||||||||||  ||||||||||||||||||||| |  |||||| ||||| ||||||||||||| ||  |||| |||||||||| |||||    
T  7969992 gaagaggggttttgaggtgtaaccaagaaagaaggaaaagactttttaaaaat-aaattttatgaaaagg--taattttgtcattttagggtg 7970081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 5620 - 5552
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcatttt 251  Q
    |||||||||||||| |||||| || |||||||||||| |||||||||| ||||  ||||| ||||||||||    
T  5620 gtgtaaccaagaaaaaaggaagatactttttgaaaattaaattttatggaagg--ataattttgtcatttt 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 4229746 - 4229659
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    |||||||||||||| |||||| ||| ||||||||||| |||||||||| ||||  |||||  ||||||||||   |||||||| ||||||    
T  4229746 gtgtaaccaagaaaaaaggaagatgttttttgaaaattaaattttatggaagg--ataattctgtcattttgaaatgcaaccaggattaa 4229659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 5347437 - 5347506
Alignment:
Q  166 aagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||||||||| |||||||| | ||| |||||| | ||||||||||| | ||||||||||||||||||    
T  5347437 aagaggggttttggggtgtaaccgataaa-aaggaagaggctttttgaaacttaaattttatgaaagggta 5347506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 44025681 - 44025627
Alignment:
Q  182 tgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||| |||||||    
T  44025681 tgtaaccaagaaaaaaggaaaatgctttttgaaaatttaattttatggaagggta 44025627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 16571211 - 16571278
Alignment:
Q  168 gaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggta 236  Q
    |||||||||| | |||||||||||||||||||||   ||||||| ||||| ||| ||||||||||||||    
T  16571211 gaggggttttcgggtgtaaccaagaaagaaggaaacagctttttaaaaat-aaactttatgaaagggta 16571278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 38460060 - 38460162
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccat 264  Q
    |||||||| |||| | ||||||| || ||| |||||| |||||||| |||||| || ||||||  |||||||  || ||||||||||| ||||||||||     
T  38460060 gaagagggattttagggtgtaacaaaaaaaaaaggaagatgcttttcgaaaattaa-ttttatagaagggta--attttgtcattttgaggtgcaaccag 38460156  T
Q  265 gattaa 270  Q
    ||||||    
T  38460157 gattaa 38460162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 35329723 - 35329787
Alignment:
Q  203 atgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||||||||||||| || ||||||| ||||  ||||| |||||||||||| ||||||||| ||||||    
T  35329723 atgctttttgaaaattaa-ttttatggaagg--ataattttgtcattttggagtgcaaccaggattaa 35329787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 13 - 278
Target Start/End: Complemental strand, 14146 - 13877
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgatt-gaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaa 110  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14146 gagaacccataacaagaaaaacacaatcgatttgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaa 14047  T
Q  111 gtatggatttaaaaatcttcgcagaacacaatcgat----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgc 206  Q
    |||||| ||| |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||    
T  14046 gtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggc 13947  T
Q  207 tttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  13946 tttttgaaaatcaaattttatgaaaggg--taatcttgtcattttagggtgcaaccatgattaactagggtg 13877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 1916 - 2184
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1916 gagaacccataacaagaaaaaaacaatcgattgaagaacaacactttctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 2015  T
Q  112 tatggatttaaaaatcttcgcagaacaca----atcgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| ||||||| |||||||||||    ||||||||||||||||||||||||||||| || |||||| |||||||||| |||||||||||  |||    
T  2016 tatggttttgaaaatctccgcagaacacaatcgatcgattggagaattatggttttggaagaaggattttggggtgtaaccaaaaaagaaggaatgggct 2115  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  2116 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttggggtgcaaccatgattaactagggtg 2184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 179; Significance: 1e-96; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 156917 - 157184
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  156917 gagaacccataacaagaaaa-cgcaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttcttgaaaatcatgaatggacgtgagaaag 157015  T
Q  112 tatggatttaaaaatcttcgcagaacacaat----cgattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||| ||| |||||||||||||||||||||    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||    
T  157016 tatggttttgaaaatcttcgcagaacacaattgatcgattggagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggct 157115  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||    
T  157116 ttttgaaaatcaaattttatgaaaggg--taatcttgtcattttttggtgcaaccatgattaactagggtg 157184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 200143 - 200056
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaa 270  Q
    ||||| |||||||| |||||| ||| ||||||||||| |||||||||| |||||  |||| ||||||||||||| |||| ||| ||||||    
T  200143 gtgtagccaagaaaaaaggaagatgttttttgaaaattaaattttatggaaggg--taattttgtcattttgggatgcatccaggattaa 200056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 175; Significance: 3e-94; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 13 - 278
Target Start/End: Original strand, 13851 - 14118
Alignment:
Q  13 gagaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaag 111  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13851 gagaacccataacaa-aaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaag 13949  T
Q  112 tatggatttaaaaatcttcgcagaacacaatc----gattggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgct 207  Q
    ||||  ||| ||||||||||||||||||||||    ||||| |||||||| ||||||||| | ||||||||| |||||||||| |||||||||||| |||    
T  13950 tatgcttttgaaaatcttcgcagaacacaatcgatggattgaagaattatcgttttggaaaaagggttttggggtgtaaccaaaaaagaaggaataggct 14049  T
Q  208 ttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||    
T  14050 ttttgaaaatcaaattttatgaaagg--ataatcttataattttggggtgcaaccatgattaactagggtg 14118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 46 - 278
Target Start/End: Complemental strand, 12770 - 12535
Alignment:
Q  46 aagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatgg-cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcg 144  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||    
T  12770 aagaacaacacttgctaacctgatttgcttcgaattttctttgaaatcatgaatggacgtgagaaagtatgcttttgaaaatcttcgcagaacacaatcg 12671  T
Q  145 at----tggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataat 240  Q
    ||    || |||||||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||    
T  12670 atggattgaagaattatggttttggaagaagggttttggggtgtaaccaaaaaagaaggaataggctttttgaaaatcaaattttatgaaaggg--taat 12573  T
Q  241 cttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12572 cttgtcattttggggtgcaaccatgattaactagggtg 12535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 102 - 278
Target Start/End: Original strand, 2915 - 3093
Alignment:
Q  102 cgtgagaaagtatggatttaaaaatcttcgcagaacacaatcg----attggagaattatggttttggaagaggggttttggagtgtaaccaagaaagaa 197  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||||||| ||||| |    
T  2915 cgtgagaaagtatggttttgaaaatcttcgcagaacacaatcgatcgattggagaattatggttttggaagaggggttttggggtgtaaccatgaaagga 3014  T
Q  198 ggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    |||||||||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||||||||||||||||||    
T  3015 ggaatatgctttttgaaaatcaaattttataaaaggg--taatattgtcattttggggtgcaaccatgattaactagggtg 3093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 3708 - 3804
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatgaaagggtataatcttgtcattttggggtgcaacca 263  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||  ||||| || ||||||||||||| |||||    
T  3708 gaagaagggttttggagtgtaaccaagaaaaaaggaagatgctttttcaaaatcaaattttatgtaagg--ataattttatcattttggggtgtaacca 3804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 3575 - 3651
Alignment:
Q  15 gaacccataagaagaaaaacacaatcgattgaagaacaacacttgctaacctgatttgcttcgaattttctttgaaat 92  Q
    |||||||||| |||||||||| ||| |||||||||| |  |||||||||||| |||||||| |||  |||||||||||    
T  3575 gaacccataacaagaaaaacataattgattgaagaatacaacttgctaaccttatttgctttgaa-attctttgaaat 3651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 38424 - 38481
Alignment:
Q  219 aaattttatgaaagggtataatcttgtcattttggggtgcaaccatgattaactagggtg 278  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  38424 aaattttatgaaagggta--atcttgtcattttggagtgcaaccatgattaactagggtg 38481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 365809 - 365872
Alignment:
Q  165 gaagaggggttttggagtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatg 228  Q
    |||||||| |||| | |||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  365809 gaagagggattttagggtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatg 365872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 8828 - 8781
Alignment:
Q  181 gtgtaaccaagaaagaaggaatatgctttttgaaaatcaaattttatg 228  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  8828 gtgtaaccaagaaaaaaggaagatgctttttgaaaattaaattttatg 8781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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