View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11827_high_34 (Length: 308)

Name: NF11827_high_34
Description: NF11827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11827_high_34
NF11827_high_34
[»] chr6 (63 HSPs)
chr6 (20-300)||(5000457-5000735)
chr6 (122-287)||(16766660-16766825)
chr6 (122-300)||(10339056-10339235)
chr6 (134-300)||(5970051-5970211)
chr6 (122-300)||(9107301-9107479)
chr6 (122-300)||(18367787-18367964)
chr6 (122-288)||(9629345-9629511)
chr6 (122-286)||(34073280-34073442)
chr6 (123-190)||(32978842-32978909)
chr6 (122-190)||(24645530-24645598)
chr6 (122-190)||(28152147-28152215)
chr6 (122-285)||(31384885-31385047)
chr6 (122-300)||(10294057-10294235)
chr6 (133-300)||(8713935-8714097)
chr6 (187-300)||(9027128-9027241)
chr6 (198-285)||(30866151-30866238)
chr6 (122-248)||(7248360-7248486)
chr6 (129-285)||(3398584-3398733)
chr6 (122-286)||(13360315-13360467)
chr6 (122-286)||(34595098-34595251)
chr6 (122-190)||(4877992-4878059)
chr6 (122-270)||(17435179-17435327)
chr6 (192-263)||(19040339-19040410)
chr6 (192-294)||(5732511-5732613)
chr6 (117-266)||(7265530-7265668)
chr6 (193-275)||(9658854-9658936)
chr6 (186-300)||(10888969-10889083)
chr6 (120-287)||(11352322-11352491)
chr6 (122-232)||(16488521-16488631)
chr6 (121-251)||(26562688-26562818)
chr6 (157-270)||(4040446-4040559)
chr6 (150-251)||(8931561-8931662)
chr6 (198-287)||(13851699-13851788)
chr6 (207-287)||(7977846-7977926)
chr6 (171-267)||(9195734-9195830)
chr6 (158-270)||(25038038-25038150)
chr6 (122-190)||(28715344-28715412)
chr6 (122-287)||(1532201-1532365)
chr6 (124-206)||(23130405-23130487)
chr6 (207-300)||(7938066-7938159)
chr6 (122-179)||(8776910-8776967)
chr6 (221-285)||(853889-853953)
chr6 (122-190)||(6898223-6898291)
chr6 (187-255)||(9025490-9025558)
chr6 (190-242)||(11784215-11784267)
chr6 (122-190)||(13364647-13364715)
chr6 (123-197)||(8389411-8389485)
chr6 (207-294)||(8805588-8805675)
chr6 (151-261)||(32313393-32313504)
chr6 (122-168)||(9027238-9027284)
chr6 (226-300)||(21395342-21395416)
chr6 (133-191)||(23771626-23771684)
chr6 (207-277)||(31579241-31579311)
chr6 (122-168)||(31959221-31959267)
chr6 (123-168)||(9025448-9025493)
chr6 (142-243)||(9522898-9522999)
chr6 (122-175)||(12236723-12236776)
chr6 (221-270)||(20371140-20371189)
chr6 (142-211)||(21223717-21223786)
chr6 (133-186)||(24831861-24831914)
chr6 (215-300)||(32299225-32299310)
chr6 (122-190)||(7378028-7378096)
chr6 (116-168)||(7625187-7625239)
[»] chr8 (55 HSPs)
chr8 (122-287)||(22651939-22652104)
chr8 (122-300)||(29510235-29510413)
chr8 (122-285)||(11944630-11944793)
chr8 (122-300)||(24362132-24362311)
chr8 (151-287)||(2572016-2572152)
chr8 (122-277)||(8343289-8343444)
chr8 (122-293)||(11803216-11803387)
chr8 (122-267)||(15816060-15816205)
chr8 (122-227)||(29447467-29447572)
chr8 (122-258)||(29447041-29447177)
chr8 (140-190)||(44462155-44462205)
chr8 (140-190)||(44469688-44469738)
chr8 (125-250)||(12570669-12570793)
chr8 (122-285)||(4673356-4673519)
chr8 (125-287)||(22197676-22197838)
chr8 (165-287)||(28384967-28385090)
chr8 (124-190)||(5813641-5813707)
chr8 (142-188)||(31557047-31557093)
chr8 (125-250)||(12570443-12570567)
chr8 (198-267)||(34897068-34897137)
chr8 (207-300)||(37283826-37283919)
chr8 (121-300)||(926729-926897)
chr8 (215-283)||(13436988-13437056)
chr8 (126-190)||(33405330-33405394)
chr8 (215-270)||(36934650-36934705)
chr8 (124-242)||(4122182-4122300)
chr8 (122-168)||(8343038-8343084)
chr8 (122-196)||(12402617-12402691)
chr8 (133-179)||(22943302-22943348)
chr8 (122-232)||(26902106-26902216)
chr8 (122-267)||(6065588-6065733)
chr8 (122-191)||(14134747-14134816)
chr8 (121-190)||(20679336-20679405)
chr8 (198-279)||(27213518-27213599)
chr8 (122-190)||(3951478-3951546)
chr8 (191-243)||(14134706-14134758)
chr8 (122-201)||(27067233-27067310)
chr8 (175-270)||(29776016-29776109)
chr8 (122-186)||(36450696-36450760)
chr8 (126-189)||(38079049-38079112)
chr8 (128-190)||(126295-126357)
chr8 (170-256)||(4611528-4611614)
chr8 (207-285)||(25192363-25192441)
chr8 (126-168)||(40064033-40064075)
chr8 (120-300)||(44067466-44067646)
chr8 (122-190)||(17751704-17751773)
chr8 (122-190)||(17760691-17760760)
chr8 (213-250)||(18067956-18067993)
chr8 (122-179)||(18407779-18407836)
chr8 (122-190)||(949207-949275)
chr8 (192-244)||(3025557-3025609)
chr8 (122-190)||(24413501-24413569)
chr8 (198-270)||(31236584-31236656)
chr8 (213-285)||(31556962-31557033)
chr8 (207-251)||(39954295-39954339)
[»] chr1 (76 HSPs)
chr1 (122-251)||(9828043-9828172)
chr1 (122-287)||(40917714-40917877)
chr1 (122-251)||(25361885-25362010)
chr1 (147-258)||(9629856-9629967)
chr1 (122-287)||(1486646-1486805)
chr1 (122-283)||(5944248-5944411)
chr1 (140-287)||(38503283-38503428)
chr1 (122-294)||(47989454-47989625)
chr1 (125-277)||(5898211-5898352)
chr1 (122-270)||(6414933-6415080)
chr1 (158-270)||(16252853-16252965)
chr1 (187-282)||(20157346-20157441)
chr1 (150-261)||(27471525-27471636)
chr1 (122-285)||(31694641-31694804)
chr1 (207-294)||(34298392-34298479)
chr1 (207-284)||(398781-398858)
chr1 (122-190)||(22515829-22515897)
chr1 (122-190)||(40258875-40258943)
chr1 (191-286)||(2896121-2896216)
chr1 (122-201)||(6427513-6427592)
chr1 (133-300)||(6612113-6612280)
chr1 (122-250)||(34371714-34371843)
chr1 (213-287)||(15641052-15641126)
chr1 (136-190)||(43492450-43492504)
chr1 (143-261)||(17831485-17831601)
chr1 (169-246)||(44482234-44482311)
chr1 (134-190)||(1815306-1815362)
chr1 (122-298)||(17754263-17754439)
chr1 (122-190)||(38078603-38078671)
chr1 (120-190)||(29163321-29163391)
chr1 (187-292)||(7918207-7918312)
chr1 (133-242)||(16164257-16164366)
chr1 (121-190)||(42359390-42359459)
chr1 (143-188)||(52284764-52284809)
chr1 (122-174)||(9690215-9690267)
chr1 (122-270)||(18556387-18556535)
chr1 (153-251)||(26238078-26238172)
chr1 (122-190)||(46348325-46348393)
chr1 (122-190)||(51410074-51410142)
chr1 (174-285)||(10572572-10572683)
chr1 (122-277)||(36905970-36906124)
chr1 (207-285)||(1262849-1262927)
chr1 (122-164)||(22881569-22881611)
chr1 (122-232)||(25934634-25934744)
chr1 (122-168)||(29144322-29144368)
chr1 (207-261)||(36878450-36878504)
chr1 (122-168)||(46940750-46940796)
chr1 (207-268)||(12443476-12443537)
chr1 (213-274)||(16812519-16812580)
chr1 (122-175)||(17778617-17778670)
chr1 (133-190)||(18190061-18190118)
chr1 (122-186)||(34741899-34741963)
chr1 (207-300)||(37055872-37055964)
chr1 (174-278)||(5376483-5376587)
chr1 (216-300)||(9709770-9709854)
chr1 (122-201)||(15765795-15765875)
chr1 (122-186)||(16297223-16297287)
chr1 (122-186)||(33202956-33203020)
chr1 (134-268)||(40181855-40181976)
chr1 (121-264)||(48147967-48148111)
chr1 (172-247)||(21038086-21038161)
chr1 (215-277)||(6427323-6427385)
chr1 (199-249)||(28674801-28674851)
chr1 (122-168)||(52903317-52903363)
chr1 (213-270)||(2851002-2851058)
chr1 (122-179)||(12919005-12919062)
chr1 (207-300)||(16297299-16297392)
chr1 (122-211)||(17408730-17408819)
chr1 (117-190)||(19637817-19637890)
chr1 (122-191)||(27965942-27966011)
chr1 (207-287)||(15323126-15323206)
chr1 (150-190)||(21530738-21530778)
chr1 (207-251)||(25098571-25098615)
chr1 (125-185)||(26830641-26830701)
chr1 (207-287)||(31015006-31015086)
chr1 (213-261)||(40285676-40285724)
[»] chr7 (64 HSPs)
chr7 (122-261)||(32308109-32308248)
chr7 (122-285)||(24339607-24339770)
chr7 (122-287)||(598171-598325)
chr7 (193-300)||(17851381-17851488)
chr7 (122-286)||(1433418-1433576)
chr7 (143-286)||(19206014-19206157)
chr7 (122-284)||(43027406-43027562)
chr7 (163-293)||(26329354-26329484)
chr7 (122-300)||(5409773-5409945)
chr7 (122-251)||(7438705-7438834)
chr7 (122-243)||(11665371-11665492)
chr7 (119-244)||(26033389-26033514)
chr7 (122-190)||(15680858-15680926)
chr7 (122-190)||(21880201-21880269)
chr7 (122-190)||(33994261-33994329)
chr7 (122-197)||(21831828-21831903)
chr7 (207-282)||(26733272-26733347)
chr7 (122-300)||(9778458-9778622)
chr7 (207-285)||(27945006-27945084)
chr7 (121-261)||(9408264-9408404)
chr7 (214-286)||(11722121-11722193)
chr7 (122-261)||(20549780-20549908)
chr7 (122-190)||(21864857-21864925)
chr7 (122-185)||(32093956-32094020)
chr7 (187-300)||(5235936-5236049)
chr7 (122-270)||(22484005-22484142)
chr7 (122-230)||(2334270-2334377)
chr7 (125-185)||(13770750-13770810)
chr7 (122-190)||(32287405-32287473)
chr7 (144-191)||(7973087-7973134)
chr7 (150-277)||(15902795-15902922)
chr7 (207-286)||(43249957-43250036)
chr7 (246-300)||(1885523-1885577)
chr7 (159-300)||(9933225-9933364)
chr7 (142-176)||(10043007-10043041)
chr7 (124-174)||(40287306-40287356)
chr7 (122-191)||(3554448-3554517)
chr7 (142-187)||(8234198-8234243)
chr7 (170-276)||(8842318-8842420)
chr7 (207-300)||(30730987-30731080)
chr7 (122-178)||(20545186-20545242)
chr7 (207-251)||(29787385-29787429)
chr7 (215-283)||(36297369-36297436)
chr7 (133-176)||(3294257-3294300)
chr7 (192-267)||(9482917-9482992)
chr7 (213-300)||(21141004-21141091)
chr7 (123-185)||(2533761-2533823)
chr7 (192-270)||(3721074-3721151)
chr7 (122-168)||(6490787-6490833)
chr7 (122-168)||(10359670-10359716)
chr7 (195-261)||(22868031-22868097)
chr7 (207-277)||(24105651-24105721)
chr7 (122-168)||(24105749-24105795)
chr7 (122-168)||(40131941-40131987)
chr7 (151-285)||(48246773-48246907)
chr7 (221-282)||(2425763-2425824)
chr7 (226-283)||(31808544-31808600)
chr7 (192-261)||(42720891-42720960)
chr7 (227-276)||(49107795-49107844)
chr7 (154-190)||(7197271-7197307)
chr7 (254-294)||(13557807-13557847)
chr7 (122-174)||(18035807-18035858)
chr7 (193-269)||(21828407-21828483)
chr7 (207-251)||(23191895-23191939)
[»] chr4 (69 HSPs)
chr4 (122-300)||(30982809-30982984)
chr4 (122-300)||(23292928-23293095)
chr4 (122-287)||(36635287-36635447)
chr4 (122-258)||(24613632-24613768)
chr4 (122-251)||(22234821-22234951)
chr4 (142-300)||(903872-904030)
chr4 (122-259)||(47263977-47264114)
chr4 (116-179)||(29205528-29205591)
chr4 (122-300)||(19482618-19482796)
chr4 (122-300)||(24343457-24343630)
chr4 (122-300)||(847901-848079)
chr4 (124-190)||(12797282-12797348)
chr4 (122-260)||(23861371-23861500)
chr4 (122-300)||(44081509-44081686)
chr4 (122-283)||(5414103-5414264)
chr4 (133-270)||(30522858-30522994)
chr4 (122-274)||(38148656-38148808)
chr4 (122-178)||(715547-715603)
chr4 (122-178)||(752873-752929)
chr4 (122-190)||(12895216-12895284)
chr4 (122-230)||(19312355-19312463)
chr4 (122-190)||(34306746-34306814)
chr4 (122-185)||(14465007-14465070)
chr4 (122-251)||(3947703-3947826)
chr4 (135-257)||(5832638-5832760)
chr4 (170-267)||(4383351-4383447)
chr4 (207-300)||(13783231-13783324)
chr4 (207-275)||(22440616-22440684)
chr4 (124-300)||(27706110-27706286)
chr4 (122-190)||(28964190-28964258)
chr4 (122-190)||(35157927-35157995)
chr4 (192-251)||(8423719-8423778)
chr4 (124-190)||(20743210-20743277)
chr4 (207-286)||(21945467-21945546)
chr4 (120-190)||(4157198-4157268)
chr4 (120-190)||(4157485-4157555)
chr4 (186-283)||(5775353-5775452)
chr4 (221-287)||(33950099-33950165)
chr4 (122-191)||(8423660-8423729)
chr4 (235-300)||(20633435-20633500)
chr4 (133-190)||(21945552-21945609)
chr4 (122-179)||(35161096-35161153)
chr4 (181-261)||(35723374-35723455)
chr4 (122-167)||(37203324-37203369)
chr4 (123-168)||(46715416-46715461)
chr4 (133-190)||(49431075-49431132)
chr4 (122-178)||(3064870-3064926)
chr4 (122-190)||(16073443-16073511)
chr4 (150-190)||(29205493-29205533)
chr4 (122-177)||(7214468-7214523)
chr4 (174-249)||(21658797-21658872)
chr4 (127-174)||(21873309-21873356)
chr4 (127-174)||(21929170-21929217)
chr4 (125-268)||(30838192-30838335)
chr4 (207-282)||(40179652-40179727)
chr4 (122-251)||(11931279-11931408)
chr4 (126-168)||(30094084-30094126)
chr4 (117-174)||(482180-482237)
chr4 (122-191)||(21345475-21345544)
chr4 (133-190)||(30103310-30103367)
chr4 (122-159)||(30299009-30299046)
chr4 (122-159)||(30327877-30327914)
chr4 (145-178)||(36409469-36409502)
chr4 (145-178)||(36423635-36423668)
chr4 (140-189)||(40179596-40179645)
chr4 (198-251)||(40613449-40613502)
chr4 (122-190)||(53381532-53381601)
chr4 (207-251)||(1747211-1747255)
chr4 (122-174)||(12884349-12884401)
[»] scaffold0008 (1 HSPs)
scaffold0008 (122-298)||(263303-263479)
[»] scaffold0003 (1 HSPs)
scaffold0003 (122-286)||(241558-241722)
[»] chr5 (62 HSPs)
chr5 (122-300)||(21522700-21522878)
chr5 (122-300)||(21533266-21533444)
chr5 (122-251)||(3966502-3966631)
chr5 (120-300)||(19579651-19579831)
chr5 (122-251)||(7677704-7677833)
chr5 (133-300)||(15382427-15382591)
chr5 (125-275)||(15410382-15410532)
chr5 (122-251)||(32766874-32767003)
chr5 (191-298)||(12927606-12927713)
chr5 (181-283)||(22423802-22423904)
chr5 (122-287)||(37328777-37328940)
chr5 (125-270)||(7174954-7175098)
chr5 (123-251)||(18592072-18592200)
chr5 (122-266)||(30098310-30098454)
chr5 (122-287)||(17123011-17123164)
chr5 (121-287)||(21190997-21191152)
chr5 (122-300)||(6401448-6401626)
chr5 (122-285)||(19820330-19820488)
chr5 (172-249)||(12264810-12264887)
chr5 (207-283)||(22299497-22299572)
chr5 (170-250)||(25817495-25817575)
chr5 (122-249)||(30502330-30502446)
chr5 (122-249)||(30542673-30542789)
chr5 (213-300)||(13287421-13287508)
chr5 (122-232)||(21814279-21814389)
chr5 (144-282)||(36642716-36642853)
chr5 (122-251)||(11685938-11686066)
chr5 (150-287)||(21541993-21542130)
chr5 (213-285)||(6770508-6770580)
chr5 (205-261)||(19438332-19438388)
chr5 (122-190)||(28588616-28588684)
chr5 (122-250)||(41091188-41091316)
chr5 (144-259)||(12641665-12641780)
chr5 (122-240)||(14873527-14873639)
chr5 (192-295)||(16203796-16203899)
chr5 (208-287)||(26205777-26205856)
chr5 (125-179)||(21194068-21194122)
chr5 (122-168)||(21351852-21351898)
chr5 (122-179)||(16304368-16304425)
chr5 (122-243)||(40131628-40131749)
chr5 (120-185)||(43001859-43001924)
chr5 (121-190)||(18421778-18421851)
chr5 (215-287)||(41558707-41558779)
chr5 (122-190)||(42893409-42893477)
chr5 (174-261)||(6035472-6035558)
chr5 (144-243)||(30183556-30183655)
chr5 (225-268)||(38816729-38816772)
chr5 (122-168)||(2436982-2437028)
chr5 (207-286)||(4105221-4105302)
chr5 (175-261)||(21351889-21351975)
chr5 (235-285)||(22013379-22013429)
chr5 (124-190)||(30098982-30099048)
chr5 (208-282)||(34879318-34879392)
chr5 (122-172)||(38464315-38464365)
chr5 (221-287)||(42469184-42469250)
chr5 (207-284)||(6247588-6247665)
chr5 (215-300)||(41995421-41995506)
chr5 (128-168)||(17088362-17088402)
chr5 (199-247)||(17593730-17593778)
chr5 (198-270)||(27144443-27144515)
chr5 (207-251)||(27932234-27932278)
chr5 (207-251)||(28588690-28588734)
[»] scaffold0036 (1 HSPs)
scaffold0036 (122-243)||(9678-9799)
[»] chr3 (64 HSPs)
chr3 (122-287)||(15796225-15796390)
chr3 (122-249)||(8039766-8039893)
chr3 (121-261)||(4987221-4987361)
chr3 (122-286)||(41961581-41961745)
chr3 (122-190)||(40993277-40993345)
chr3 (120-259)||(29508435-29508569)
chr3 (169-283)||(16192728-16192842)
chr3 (126-282)||(25064877-25065031)
chr3 (144-268)||(14832081-14832205)
chr3 (122-190)||(20503514-20503582)
chr3 (122-190)||(55401124-55401192)
chr3 (139-277)||(2620003-2620139)
chr3 (213-300)||(3164047-3164134)
chr3 (122-249)||(17005550-17005677)
chr3 (122-251)||(34185054-34185183)
chr3 (207-287)||(4990983-4991063)
chr3 (207-287)||(8383220-8383300)
chr3 (122-286)||(28917965-28918120)
chr3 (122-185)||(27505305-27505368)
chr3 (124-282)||(11665912-11666070)
chr3 (151-261)||(26290360-26290470)
chr3 (133-243)||(28812522-28812632)
chr3 (122-168)||(40052383-40052429)
chr3 (207-300)||(24205057-24205150)
chr3 (122-270)||(37077338-37077487)
chr3 (122-251)||(49651718-49651846)
chr3 (213-285)||(4466622-4466694)
chr3 (124-283)||(14829657-14829816)
chr3 (120-168)||(25775578-25775626)
chr3 (122-190)||(8789490-8789560)
chr3 (133-251)||(11313737-11313860)
chr3 (213-264)||(13620786-13620837)
chr3 (124-294)||(25093458-25093617)
chr3 (207-261)||(1438793-1438847)
chr3 (127-185)||(3631738-3631796)
chr3 (207-285)||(8587037-8587115)
chr3 (117-191)||(8842377-8842451)
chr3 (122-188)||(26492147-26492213)
chr3 (170-287)||(34307765-34307876)
chr3 (122-163)||(34910393-34910434)
chr3 (122-185)||(5440969-5441033)
chr3 (122-190)||(11252025-11252093)
chr3 (122-178)||(15999952-16000008)
chr3 (122-282)||(16788980-16789139)
chr3 (182-286)||(39001996-39002100)
chr3 (170-249)||(1550141-1550220)
chr3 (192-251)||(7614416-7614475)
chr3 (192-251)||(7928449-7928508)
chr3 (221-300)||(10335316-10335395)
chr3 (207-270)||(11493377-11493440)
chr3 (133-168)||(21720843-21720878)
chr3 (186-285)||(32429375-32429474)
chr3 (151-190)||(45451602-45451641)
chr3 (192-247)||(49505155-49505210)
chr3 (207-261)||(15544682-15544736)
chr3 (122-168)||(25074866-25074912)
chr3 (215-268)||(5407271-5407324)
chr3 (133-186)||(7171554-7171607)
chr3 (122-191)||(18426997-18427066)
chr3 (119-168)||(24204980-24205029)
chr3 (175-244)||(28678309-28678378)
chr3 (122-174)||(8101894-8101946)
chr3 (198-250)||(10690269-10690321)
chr3 (151-191)||(14338454-14338494)
[»] chr2 (55 HSPs)
chr2 (117-300)||(34784908-34785091)
chr2 (121-190)||(2438660-2438729)
chr2 (122-251)||(27286223-27286352)
chr2 (122-190)||(18840955-18841023)
chr2 (122-250)||(44860320-44860448)
chr2 (122-268)||(22084758-22084909)
chr2 (198-277)||(23717999-23718078)
chr2 (198-277)||(24105671-24105750)
chr2 (122-201)||(26769560-26769639)
chr2 (122-275)||(11223795-11223947)
chr2 (123-287)||(17776551-17776714)
chr2 (122-266)||(37419727-37419871)
chr2 (122-282)||(21782746-21782909)
chr2 (122-251)||(24975257-24975385)
chr2 (122-250)||(4207857-4207984)
chr2 (122-190)||(15972922-15972990)
chr2 (221-300)||(31283998-31284077)
chr2 (231-285)||(33519751-33519805)
chr2 (122-232)||(36096306-36096416)
chr2 (121-287)||(36756274-36756440)
chr2 (207-300)||(18276471-18276564)
chr2 (207-300)||(21616712-21616805)
chr2 (207-287)||(28412313-28412393)
chr2 (193-261)||(31808066-31808134)
chr2 (122-186)||(38117101-38117165)
chr2 (122-181)||(15907853-15907912)
chr2 (150-300)||(28677858-28678003)
chr2 (122-168)||(15909572-15909618)
chr2 (207-277)||(30404866-30404936)
chr2 (122-185)||(35449561-35449626)
chr2 (151-251)||(18889550-18889651)
chr2 (121-190)||(19942314-19942383)
chr2 (165-269)||(4882670-4882774)
chr2 (142-190)||(5367241-5367289)
chr2 (239-299)||(18054852-18054912)
chr2 (133-193)||(27084315-27084375)
chr2 (207-283)||(31018557-31018633)
chr2 (122-190)||(37559026-37559094)
chr2 (123-190)||(21091772-21091839)
chr2 (207-270)||(39323244-39323307)
chr2 (122-168)||(10535687-10535733)
chr2 (192-277)||(18589171-18589254)
chr2 (122-184)||(19959881-19959943)
chr2 (174-275)||(36409612-36409711)
chr2 (213-251)||(37411266-37411304)
chr2 (142-242)||(2331802-2331900)
chr2 (207-248)||(25846743-25846784)
chr2 (208-261)||(29970566-29970619)
chr2 (122-190)||(37497169-37497238)
chr2 (207-251)||(1327977-1328021)
chr2 (215-287)||(18420458-18420530)
chr2 (122-190)||(20242669-20242737)
chr2 (191-267)||(21091706-21091782)
chr2 (122-190)||(30404792-30404860)
chr2 (122-178)||(34993924-34993980)
[»] scaffold0044 (1 HSPs)
scaffold0044 (142-287)||(53147-53288)
[»] scaffold0136 (1 HSPs)
scaffold0136 (122-251)||(3780-3909)
[»] scaffold0004 (1 HSPs)
scaffold0004 (122-267)||(92790-92939)
[»] scaffold0019 (1 HSPs)
scaffold0019 (122-201)||(71774-71853)
[»] scaffold0168 (1 HSPs)
scaffold0168 (174-298)||(20995-21119)
[»] scaffold0050 (1 HSPs)
scaffold0050 (123-190)||(70327-70394)
[»] scaffold0223 (1 HSPs)
scaffold0223 (183-285)||(20137-20239)
[»] scaffold0123 (1 HSPs)
scaffold0123 (152-250)||(44486-44584)
[»] scaffold0086 (1 HSPs)
scaffold0086 (126-199)||(2979-3052)
[»] scaffold0793 (1 HSPs)
scaffold0793 (122-178)||(4823-4879)
[»] scaffold0652 (2 HSPs)
scaffold0652 (122-190)||(404-472)
scaffold0652 (207-300)||(478-571)
[»] scaffold0306 (1 HSPs)
scaffold0306 (213-285)||(13365-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (213-285)||(21890-21962)
[»] scaffold0122 (1 HSPs)
scaffold0122 (177-287)||(8629-8739)
[»] scaffold0053 (1 HSPs)
scaffold0053 (122-287)||(8761-8915)
[»] scaffold1528 (1 HSPs)
scaffold1528 (165-298)||(987-1120)
[»] scaffold0039 (1 HSPs)
scaffold0039 (139-251)||(84921-85033)
[»] scaffold0475 (1 HSPs)
scaffold0475 (226-300)||(3266-3340)
[»] scaffold0007 (1 HSPs)
scaffold0007 (221-287)||(225298-225364)
[»] scaffold0018 (1 HSPs)
scaffold0018 (186-282)||(178813-178910)
[»] scaffold0361 (1 HSPs)
scaffold0361 (122-186)||(14580-14644)
[»] scaffold0024 (1 HSPs)
scaffold0024 (159-263)||(68210-68314)
[»] scaffold0020 (1 HSPs)
scaffold0020 (187-257)||(135308-135378)
[»] scaffold0011 (1 HSPs)
scaffold0011 (117-190)||(17539-17612)
[»] scaffold0697 (1 HSPs)
scaffold0697 (150-190)||(1693-1733)
[»] scaffold0085 (1 HSPs)
scaffold0085 (215-259)||(26384-26428)
[»] scaffold0021 (1 HSPs)
scaffold0021 (207-287)||(130445-130525)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 63)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 20 - 300
Target Start/End: Original strand, 5000457 - 5000735
Alignment:
Q  20 tttcactgtccctctgtgtgtctatcactctctgatggacactgtgcttctccaacagttacatgacaaagaataatcnnnnnnnnnnctctcactttat 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| ||||| ||    
T  5000457 tttctctgtccctctgtgtgtctatcactctctgatggacactgtgcttctccaacagttacatgacaaagaataatctttttttc--ctcccacttcat 5000554  T
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5000555 caatgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 5000654  T
Q  220 catgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5000655 catgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 5000735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 16766825 - 16766660
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||| |||| ||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  16766825 atgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 16766726  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||||| || |||||||||| ||||||  |||||||| ||| |||| ||||||||||||||||    
T  16766725 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgt 16766660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 10339056 - 10339235
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatt-atactgaatc 220  Q
    |||||||||| |||||| || |||||| |||||||| ||||||||||||||||||||| |||||||||| | |||||||| ||| |||| | |||||||     
T  10339056 atgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaatt 10339155  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||||||| ||||| | |||||||||  |||||||| | | |||| ||||| |||||| ||| |||||| |||||    
T  10339156 atgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgct 10339235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 5970051 - 5970211
Alignment:
Q  134 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctc 233  Q
    ||||| ||||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||  |||| |  ||||| ||||||| |||||||||| ||    
T  5970051 cactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgattttttc 5970150  T
Q  234 gaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
     |||||||| | ||||||| |||      |||||||||||||||||||||||||  |||||||||||    
T  5970151 aaattattaactgtgtcgacgtg------tccgtgtcatgtccggtgtccgtgtccgtatctgtgct 5970211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 9107301 - 9107479
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||  ||||| |||||||||  ||||||||||||||||||   || ||||| |||||||||| ||||| ||||  |  ||||| |||||||      
T  9107301 atgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattt 9107400  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||| || |||||||||| ||||||  |||| ||| |||||||| ||||||||||||||||  ||||| |||||    
T  9107401 tgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgct 9107479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 18367964 - 18367787
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | |||| || |||||||| ||||| |||||||||||||||||||||||||| ||||| |||| ||| ||||| |||| ||      
T  18367964 atgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattt 18367865  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||||||  ||  |||||| ||||||  ||||| || ||| |||| ||||||||||||||||  ||||| |||||    
T  18367864 tgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgct 18367787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 9629511 - 9629345
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat-gacactgacatataaaattatactgaatc 220  Q
    |||||||| | |||||| |||||||||||||||| | ||||||||||  ||| ||||| ||||| ||||  ||||| |||| ||| ||||| | |||||     
T  9629511 atgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac-gacaccgacaccgacacatataattacattgaatt 9629413  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgta 288  Q
    ||||||||||||| ||||||| |||||||||  |||||| |||||||||| ||||| ||||| |||||    
T  9629412 atgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtgta 9629345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 34073280 - 34073442
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||| |||||| ||||||||||||||| ||  ||||||||  |||||||||| ||||| |||  ||| ||||| ||||||| |    
T  34073280 atgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaatta 34073377  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    || ||||||||| ||||||||||| ||| |   ||||||| |||||||| ||||| |||||||||    
T  34073378 tgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtccgtg 34073442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 32978842 - 32978909
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 32978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 24645598 - 24645530
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||  |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||    
T  24645598 atgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgaca 24645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 28152215 - 28152147
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||| ||||||||||    
T  28152215 atgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 28152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 285
Target Start/End: Complemental strand, 31385047 - 31384885
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | ||||||| ||||||||||||| ||||| ||||||||||  ||| | ||| ||||||||||  |  ||||| ||||||| |    
T  31385047 atgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatta 31384949  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||||| || |||||||||  || || |  || |||||||||| |||||| ||||||||||    
T  31384948 tgtgattttttcaaattattagttgtatcaacatgccagtatccgtatcatgttcggtgtccgt 31384885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 10294235 - 10294057
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  |||||| || ||||||  ||||||  || |||||||  ||||||||| |||||| ||| ||||| |||| ||| ||||| | ||||  |    
T  10294235 atgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaaata 10294136  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    || |||| |||| ||||||||||||| |||   |||||||||||||||| |||||||||| |||||  ||||| |||||    
T  10294135 tgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgct 10294057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 8714097 - 8713935
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtga-ttttc 231  Q
    |||||| ||||||| | ||||||||| ||||||| |||||||||||| |||||||||| |||||  |||| |  ||||| ||||||| |||||| ||||     
T  8714097 acactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttttt 8713998  T
Q  232 tcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    || |||||||| | ||||||| |||      ||| |||||||||||||||||||||  |||| ||||||    
T  8713997 tcaaattattaactgtgtcgacgtg------tccatgtcatgtccggtgtccgtgtccgtatttgtgct 8713935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 9027241 - 9027128
Alignment:
Q  187 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||| ||||| |||| ||| ||||| || |||| |||||||| |||| |||||||||||||||||  |||||||| |||||||| ||||||| |||||||    
T  9027241 gacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtg 9027142  T
Q  287 tatgtatctgtgct 300  Q
    |  ||||| |||||    
T  9027141 tccgtatcggtgct 9027128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 285
Target Start/End: Original strand, 30866151 - 30866238
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    |||| ||| ||||| | ||||| ||||||||||||| ||||||||||||||| | |||||| || || ||||||||||||||||||||    
T  30866151 gacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgt 30866238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 7248486 - 7248360
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||  ||| |||||  ||||||||| ||| |  ||| ||| |||||  |||||| |    
T  7248486 atgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaatta 7248387  T
Q  222 tgtgattttctcgaattattagcggtg 248  Q
    |||||||| |||  |||||||| ||||    
T  7248386 tgtgatttcctcagattattagtggtg 7248360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 285
Target Start/End: Complemental strand, 3398733 - 3398584
Alignment:
Q  129 acgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgatt 228  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||      || ||| ||||| || |  || ||||| ||||||| || |||||    
T  3398733 acgaacactcctctgattagacgtgttccggtgtcggacatgtgtcgtgt------ccaacacgacaccgatacttataattacactgaattatatgatt 3398640  T
Q  229 ttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    || || |||||||||| ||||||  |||||||| |||||||| ||| || |||||||    
T  3398639 tt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgt 3398584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 13360315 - 13360467
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||||||||||||| |||||| | ||||||||||| ||| ||||||||||||||          ||||||  ||||| ||||||| |    
T  13360315 atgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccga---------aacatat--aattacactgaatta 13360402  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||||||||| ||||| ||| |||||||| ||||| || | ||| || ||||| |||||||||    
T  13360403 tgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtccagtgtccgtg 13360467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 34595251 - 34595098
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| |||||||||  ||||||||||||| |||| |||||||||| ||||||     ||||||      |  ||||| ||||||| |    
T  34595251 atgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacc-----gacact------tgtaattacactgaatta 34595163  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    ||||||||| || |||||||||  ||||||  |||||| | |||||||| |||||||||||||||    
T  34595162 tgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 4878059 - 4877992
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||||||||| ||||||| | |||||||||||||||||||| ||||||||||    
T  4878059 atgaagcacggacactcctcggattaggcgtgtcctg-tgtcggacatgtgtcgtgtccgacaccgaca 4877992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 17435327 - 17435179
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||| ||| ||||| ||| ||||||||||||||| |||||| ||| |||||||||| |||| |||||  ||||| |||  |  ||||| ||||||| |    
T  17435327 atgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaatta 17435228  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||| ||||| |  ||||||||||  |||||| || ||||| ||||||||    
T  17435227 tgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 19040410 - 19040339
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtat 263  Q
    ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 5732511 - 5732613
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgt 291  Q
    ||||| |||| ||| ||||| ||| ||  ||||||||||||| |||||||| ||||||||  |||||||| ||| |||| ||||| |||||||||| |||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgtgtctgt 5732610  T
Q  292 atc 294  Q
    |||    
T  5732611 atc 5732613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 117 - 266
Target Start/End: Original strand, 7265530 - 7265668
Alignment:
Q  117 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactg 216  Q
    ||||||||||||||| || ||| ||||||||| | | | |||||||||||||||| | ||||| ||||||||||         |||||||  ||| ||||    
T  7265530 tatcaatgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgaca---------catataa--ttacactg 7265618  T
Q  217 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccg 266  Q
    ||| ||||||||||||| ||||||||||||||| |  |||||||| ||||    
T  7265619 aattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 275
Target Start/End: Complemental strand, 9658936 - 9658854
Alignment:
Q  193 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 275  Q
    |||| |||| ||| ||||| ||||||| ||||||||||||  |||||||||||||||||  |||||||| |||||||| ||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 10888969 - 10889083
Alignment:
Q  186 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||| |||||| ||| ||| ||| | ||| ||| |||||||||| || |||||||||||||||| ||||||| || ||||||||||||  | |||||||    
T  10888969 cgacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgtttgatgtccgt 10889068  T
Q  286 gtatgtatctgtgct 300  Q
    || || ||| |||||    
T  10889069 gtctgcatccgtgct 10889083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 287
Target Start/End: Complemental strand, 11352491 - 11352322
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 219  Q
    |||| ||||||| |||||||| || | | |||||||| | ||||||||| |||| |||||||| ||||||| |||| ||| | ||| ||||| |  ||||    
T  11352491 caataaagcacggacactctttgggtaaaacgtgtcctgatgtcggacacgtgttgtgtctgataccgacacgacattgatacatataattacaaggaat 11352392  T
Q  220 catgtgattttctcgaat--tattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
     | ||||||||||| | |  |||||||||||||||  ||| |||||| ||||| ||| || |||||||||    
T  11352391 taggtgattttctcaacttatattagcggtgtcgacatgttagtatctgtgtcgtgttcgatgtccgtgt 11352322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 16488521 - 16488631
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||||||| || | |||| || |||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| ||| ||||| |||| ||      
T  16488521 atgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattt 16488620  T
Q  222 tgtgattttct 232  Q
    |||||||||||    
T  16488621 tgtgattttct 16488631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 251
Target Start/End: Complemental strand, 26562818 - 26562688
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    ||||||| |||||||||  || |||||| | |||| |  | ||||||||||| |||||  |||||||||| ||||  |||| ||| ||||| |||||||     
T  26562818 aatgaagtacgaacacttctcagattagccatgtctctatatcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaatt 26562719  T
Q  221 atgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||||||| |||| ||||| ||||||    
T  26562718 atgtgattttctcaaatttttagcagtgtcg 26562688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 4040559 - 4040446
Alignment:
Q  157 cggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtg 256  Q
    |||||| ||| | ||||||||||||| | ||| | ||| | |||||||| ||||||||||||| ||| ||||||||  ||||||||| ||||||| |||     
T  4040559 cggtgttggatacgtgtcgtgtctgatatcgagacgacgccgacatatataattatactgaataatgcgattttcttaaattattagtggtgtcggtgtt 4040460  T
Q  257 tcagtatccgtgtc 270  Q
    | ||| ||||||||    
T  4040459 taagtgtccgtgtc 4040446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 251
Target Start/End: Original strand, 8931561 - 8931662
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    |||||| | |||| ||| ||||||||  ||||||||||||| ||||  |||| ||| ||||||||||||| |||| |||||||| |||| ||||| ||||    
T  8931561 cgtgtctccgtgttggatatgtgtcgcatctgacaccgacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgt 8931660  T
Q  250 cg 251  Q
    ||    
T  8931661 cg 8931662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 13851788 - 13851699
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||| ||| ||||| ||||||| | || |||||||| |||||||||||||||||| |||||||| |||||||| ||| |  |||||||||    
T  13851788 gacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgttcaatgtccgtgt 13851699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 7977846 - 7977926
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||| |||| ||||| || |||||||||| ||||||  |||||||||||| |||| ||||| ||||||||||    
T  7977846 aattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgt 7977926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 267
Target Start/End: Original strand, 9195734 - 9195830
Alignment:
Q  171 tgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    ||||||||| |||||| ||| ||||| |||| ||| ||||| ||| ||| |||| |||||||| |||||||||  ||||||||||||  ||||||||    
T  9195734 tgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgttcgtatccgt 9195830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 25038038 - 25038150
Alignment:
Q  158 ggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 257  Q
    ||||||||||| |||||||||| |||||| |||  | || ||||| |  ||||| ||| ||| |||| |||||||| |||||||| ||||||| | ||||    
T  25038038 ggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgt 25038137  T
Q  258 cagtatccgtgtc 270  Q
    ||||||| |||||    
T  25038138 cagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 28715412 - 28715344
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||  ||| ||||| ||||||||||||||| ||| |||||||||| ||||||||||    
T  28715412 atgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgaca 28715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 1532365 - 1532201
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||| ||||||  || |||| ||| | ||||||||  ||||||||||| ||| |||||   || ||| ||||| ||||||| |    
T  1532365 atgaagcacggacactcctcgaattagatatgccccgatgtagaacatgtgtgatgtctgacaccaacacgacac---cacatataattacactgaatta 1532269  T
Q  222 tgtgattttctcgaattattagcg--gtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||| ||||| || |||||||||||  ||||||| |||||||| |  ||||| ||| |||||| |||||    
T  1532268 tgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgtgcgtgt 1532201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 23130405 - 23130487
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataa 206  Q
    |||||||  |||||| || |||||| | ||||||| | || |||| ||||||||||||||||| |||||||||||||| ||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacaccaacatgacactgacacataa 23130487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 7938159 - 7938066
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||| ||| || ||||||| || |||||||||| ||||||  |||||||| ||| |||| ||||||||||||||||  ||||| |||||    
T  7938159 aattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgct 7938066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 8776910 - 8776967
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    |||||||||| |||||| |||||||||  ||||| |||||||||||| ||||||||||    
T  8776910 atgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc 8776967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 853889 - 853953
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    |||||||||| || |||||||||  ||||||  ||||||| ||||||||| ||||||||||||||    
T  853889 atgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgt 853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 6898223 - 6898291
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||||||| ||||||||| |||||  |||||| ||||| |  ||||||| ||||||||||    
T  6898223 atgaagcacgaacactcatcggattaggcgtgtttcggtgttggacacgcttcgtgtccgacaccgaca 6898291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 9025490 - 9025558
Alignment:
Q  187 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgt 255  Q
    |||| ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||||||| ||||| ||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtccatgt 9025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 11784215 - 11784267
Alignment:
Q  190 atgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 242  Q
    ||||||| |||||||| ||||| ||||| ||||||||||||||| ||||||||    
T  11784215 atgacaccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 13364647 - 13364715
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||  |||||| ||||| ||||||||||| |||||| ||||||| |||||||  |||||||||    
T  13364647 atgaagcacagacactcgtcggaatagacgtgtcctggtgtcagacatgtatcgtgtccaacaccgaca 13364715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 8389411 - 8389485
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca-tgtgtcgtgtctgacaccgacatgacact 197  Q
    ||||||||| |||||| |||||||||  ||||||||||||||||||  |||| | ||| |||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacact 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 294
Target Start/End: Original strand, 8805588 - 8805675
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatc 294  Q
    ||||| ||| ||| ||||||||||||| |||||||||| ||| ||| ||||| || || ||||| |||| |||||  |||||||||||    
T  8805588 aattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatc 8805675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 32313504 - 32313393
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    |||||||||||| ||||||  ||| |||||||||||||||| |||||  ||| ||| ||||  | |||||||||| |||||||| | ||||||  |||||    
T  32313504 gtgtcccggtgttggacatacgtcagtgtctgacaccgacacgacacccacacatataattgcattgaatcatgttattttctcaacttattattggtgt 32313405  T
Q  250 cgatgtgtcagt 261  Q
    ||  ||||||||    
T  32313404 cggcgtgtcagt 32313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 9027284 - 9027238
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||| ||||||| | ||||||| |||||||||||||||||||    
T  9027284 atgaagcacaaacactccttggattagccgtgtcccggtgtcggaca 9027238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 21395342 - 21395416
Alignment:
Q  226 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||| ||||||||||||||| |  ||||| || ||| |||||| ||||||||| |||| |||||| |||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgtgtctgtatccgtgct 21395416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 23771684 - 23771626
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    ||||||||| | ||||||||||| | ||||||||||  ||||||||| |||||||||||    
T  23771684 acactcttcaggttagacgtgtctctgtgtcggacacatgtcgtgtccgacaccgacat 23771626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 31579241 - 31579311
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||| ||||||| ||||||||||||| |||||||| |||||| | |||| |||| ||| |||| ||||||    
T  31579241 aattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 31959267 - 31959221
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||    
T  31959267 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 31959221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 9025448 - 9025493
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||| |||||  ||||||||| |||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggaca 9025493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 9522999 - 9522898
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 241  Q
    ||||||| |||||| |||||||||||| ||||||  || ||||||||||  |||| ||||  |  ||||| ||||||| |||||||||| |  |||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattatt 9522900  T
Q  242 ag 243  Q
    ||    
T  9522899 ag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 12236776 - 12236723
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg 175  Q
    ||||||||||||||||| || | |||| |||||||||||| || ||||||||||    
T  12236776 atgaagcacgaacactcctcaggttaggcgtgtcccggtgccgaacatgtgtcg 12236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 20371140 - 20371189
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||||||||||| |||||||||||||||||  |||||| | ||||||||    
T  20371140 atgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Original strand, 21223717 - 21223786
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatta 211  Q
    ||||||| |||| |||| ||||||||| | || ||||  |||||||||| |||||||||||||| |||||    
T  21223717 ggattaggcgtgacccgttgtcggacacgcgttgtgttcgacaccgacacgacactgacatatataatta 21223786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 24831914 - 24831861
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||||||||||||||||||||||| |||| || || ||| |||| |||||||    
T  24831914 acactcttcggattagacgtgtcccgatgtcagatatatgttgtgtttgacacc 24831861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 32299310 - 32299225
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||||||||||||| |||||||| | | || | |||||||||||  |||| ||||| |||||| |||| |||||| |||||    
T  32299310 tgaattatgtgattttctcaaattattatcagggttggtgtgtcagtatttgtgttatgtctggtgtctgtgtctgtatccgtgct 32299225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 7378096 - 7378028
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||  || |||||| |||||||||||||||||    ||||||||| ||||||||||    
T  7378096 atgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgaca 7378028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 7625239 - 7625187
Alignment:
Q  116 ttatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||| ||||||||||||||||| | ||||||  ||||| |||||||||||||    
T  7625239 ttatctatgaagcacgaacactccttggattaagcgtgttccggtgtcggaca 7625187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 22652104 - 22651939
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||||  |  ||||||| ||||| |    
T  22652104 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaatta 22652005  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||||| || |||||||||| ||||||  |||||||| |||||||| ||||||||||| ||||    
T  22652004 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgt 22651939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 29510235 - 29510413
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||| | |||||||| ||||||||||  |||| ||||  |  |||||||||||||      
T  29510235 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattt 29510334  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||| || |||||||||| ||||||  |||||||| |||||||| |||||||||||| |||  ||||| |||||    
T  29510335 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgct 29510413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 285
Target Start/End: Complemental strand, 11944793 - 11944630
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| |  |||||||| ||||| | ||| ||||| |||| ||| ||||| ||||| | |    
T  11944793 atgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagtta 11944694  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||||| || |||||||| | ||||||  |||| || ||||||||| |||  |||||||||    
T  11944693 tgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgt 11944630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 24362132 - 24362311
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctg-acaccgacatgacactgacatataaaattatactgaatc 220  Q
    |||||||| | |||||||||  |||||||||    ||||| |||||| |||||||||| | ||||||||| |||| ||||| ||| ||||| |||||||     
T  24362132 atgaagcatggacactcttcaaattagacgttattcggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaatt 24362231  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||| |||| |||||||||||||||||  ||||| || || ||||| | |||||||||||| |  |||||||||||    
T  24362232 atgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgct 24362311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 287
Target Start/End: Original strand, 2572016 - 2572152
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    |||||||||| ||||||| |||||||||| ||||| |||| ||||| ||||  |  ||||| ||| ||| |||||||||| || |||||||||  |||||    
T  2572016 gtgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtc 2572115  T
Q  251 gatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    || ||||| ||||||||||| ||||| ||||||||||    
T  2572116 gacgtgtcggtatccgtgtcgtgtccagtgtccgtgt 2572152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 8343444 - 8343289
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||| |||||    | ||||||||||  |  ||||| ||| ||| |    
T  8343444 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaatta 8343345  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||||||| || ||||||||||  ||||| |||||| || || ||||| ||||||    
T  8343344 tgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 293
Target Start/End: Complemental strand, 11803387 - 11803216
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||||||||| || |||||||||||||||||| ||  ||||| |||  ||||  ||| ||| ||||| ||||||| |    
T  11803387 atgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaatta 11803288  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtat 293  Q
    |||||||||||  |||||||| | |||||  ||| ||||| | |||||| |||  ||||| ||||| |||||    
T  11803287 tgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtttggtgttcgtgtctgtat 11803216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 15816060 - 15816205
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  ||||||||| |||||||||||||||||   |||||||||| |||||| ||| ||||| ||||  || ||||| ||| ||| |    
T  15816060 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaatta 15816159  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    ||||||||| || |||||||||  ||||||  |||||||| |||||    
T  15816160 tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 227
Target Start/End: Complemental strand, 29447572 - 29447467
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||||| |||||||||||||||||  |||||||||||||||||||| |||||  ||| ||| ||||| ||| ||| |    
T  29447572 atgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaatta 29447473  T
Q  222 tgtgat 227  Q
    ||||||    
T  29447472 tgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 29447041 - 29447177
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | ||||||| ||||||| |||||| ||||  ||||||||| |||||||||||||||| ||||  |  | ||| | ||||| |    
T  29447041 atgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatta 29447140  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtc 258  Q
    |||||||||||| |||||||||  ||||||| |||||    
T  29447141 tgtgattttctcaaattattagttgtgtcgacgtgtc 29447177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 44462155 - 44462205
Alignment:
Q  140 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44462155 tcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 44469688 - 44469738
Alignment:
Q  140 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  44469688 tcggattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 12570669 - 12570793
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 224  Q
    ||||||| ||| ||||| |||||| ||||||| ||||||||||| |||| |||||||||||||| |  ||||  ||||||| ||||| ||| ||| |||     
T  12570669 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacaccaacatatataattacacttaattatgc 12570767  T
Q  225 gattttctcgaattattagcggtgtc 250  Q
    | ||||||  ||||||||||||||||    
T  12570768 gtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 285
Target Start/End: Original strand, 4673356 - 4673519
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  |||||| | ||||||| ||||| ||||||||||| ||| |||||||| |||| | ||| |||||||| |  |  ||||| |||||||      
T  4673356 atgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaattt 4673455  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    | ||||||| || |||||||| | ||||||  |||||||| || ||||| |||||| |||||||    
T  4673456 tatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgt 4673519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 287
Target Start/End: Original strand, 22197676 - 22197838
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca-tgacactgacatataaaattatactgaatcatg 223  Q
    ||||||| |||||| || |||||| ||||  ||||||||||||| ||||| |||| |||| ||||| |||||||||||  |  ||||| ||| ||| |||    
T  22197676 aagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaaattatg 22197774  T
Q  224 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||| ||| || |||||||||| |||| |  |||| ||| || ||||| ||||||||||||||||    
T  22197775 tgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgt 22197838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 287
Target Start/End: Original strand, 28384967 - 28385090
Alignment:
Q  165 gacatgtgt-cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtat 263  Q
    ||||||||| |||||||||||| |||||||||| |||| ||| ||||| ||||||| ||| |||||  ||  ||||||| |||||||| | ||||||| |    
T  28384967 gacatgtgtacgtgtctgacactgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgt 28385066  T
Q  264 ccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||| ||| | || |||||||    
T  28385067 ccgtgtcgtgttcagtatccgtgt 28385090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 5813707 - 5813641
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| |||||| ||  ||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 5813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 31557093 - 31557047
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 188  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 250
Target Start/End: Original strand, 12570443 - 12570567
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 224  Q
    ||||||| ||| ||||| |||||| ||||||| ||||||||||| |||| |||||||||||||| |  |||  |||| ||| ||||| ||| ||| ||||    
T  12570443 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacatcgacacatataattacacttaattatgt 12570541  T
Q  225 gattttctcgaattattagcggtgtc 250  Q
    | ||||||  |||||||||| |||||    
T  12570542 gtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 34897137 - 34897068
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    |||| ||| ||||| ||||||| ||||||||||||| |||||||||||||||||| ||||| || |||||    
T  34897137 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 37283826 - 37283919
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||||||| |||||||||||||  ||||||||||||| |    ||||||| ||||||||||||| ||||||| |||| ||||| |||||    
T  37283826 aattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgtatccgtgct 37283919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 300
Target Start/End: Original strand, 926729 - 926897
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    ||||||||||| |||||| |||||| |  | ||||||||||||||||| |||||| ||| ||||||     ||||||      || ||||| ||||||      
T  926729 aatgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacacc-----gacact------tataattacactgaaca 926817  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||| ||||||||| |||||||||  |||| |  |||||||| |||||||| ||||||||||||||||  ||||| |||||    
T  926818 atgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgct 926897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 13436988 - 13437056
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    ||||| |||||||||| || |||||||||| ||||||  |||||||| ||| |||||||||||||||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtcc 13437056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 33405330 - 33405394
Alignment:
Q  126 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||| |||||| | ||||||| ||||||| |||||| ||||||||||||||| ||||||||||    
T  33405330 agcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgaca 33405394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 36934705 - 36934650
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||| |||||||||| ||||||||||||||||||||| |||| ||| ||||||||    
T  36934705 tgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtc 36934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 4122182 - 4122300
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 223  Q
    |||||||| |||||||| ||||||||||||| ||||||||  ||| ||||||||| |||||  ||||  |||| |||| ||| ||||| | ||||| ||     
T  4122182 gaagcacggacactctttggattagacgtgttccggtgtccaacacgtgtcgtgtttgacattgacacaacaccgacacatataattacaatgaattata 4122281  T
Q  224 tgattttctcgaattatta 242  Q
    | ||||| || ||||||||    
T  4122282 taattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 8343084 - 8343038
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||    
T  8343084 atgaagcacagacactcttcggattaggcgtgtcccggtgtcggaca 8343038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 196
Target Start/End: Original strand, 12402617 - 12402691
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacac 196  Q
    ||||||||||||||||||||  |||| |||||| |||||||||| ||||||| ||||  |||| ||||| |||||    
T  12402617 atgaagcacgaacactcttcaaattatacgtgttccggtgtcgggcatgtgttgtgttcgacatcgacacgacac 12402691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 22943302 - 22943348
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  22943302 acactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 26902106 - 26902216
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || ||| || |||||||| ||| | |||| |||||||||| |||||  | | ||||| |||| ||| ||||| ||||||| |    
T  26902106 atgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaatta 26902205  T
Q  222 tgtgattttct 232  Q
    |||||||||||    
T  26902206 tgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 267
Target Start/End: Original strand, 6065588 - 6065733
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | | ||||  ||||| |||||||||||||||||||||||| ||||  |||| || | |||   ||  |||||||||| || |    
T  6065588 atgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgacattgacacgatattgattcatgtaattatactgtatta 6065687  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    ||||||||| | ||||||||| | || ||| |||| |||| |||||    
T  6065688 tgtgattttttagaattattaactgtatcggtgtgccagtgtccgt 6065733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 14134816 - 14134747
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    ||||| |||| |||||| ||| ||||| ||||||| |||| |||||| ||||||||| ||||||||||||    
T  14134816 atgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacat 14134747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 20679336 - 20679405
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||| | |||||| |||| | || ||||||||||||||||||| |||| | ||||||||||||||    
T  20679336 aatgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgaca 20679405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 279
Target Start/End: Complemental strand, 27213599 - 27213518
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggt 279  Q
    |||| ||| ||||| | ||||| ||||||||||||  |||||||||| ||||||  ||||| ||||||||||| ||||||||    
T  27213599 gacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 3951478 - 3951546
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| | |||| | ||||||| ||||| || ||||| |||| |||||||||||||||||||||    
T  3951478 atgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgaca 3951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 14134758 - 14134706
Alignment:
Q  191 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 243  Q
    |||||| |||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 27067233 - 27067310
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 201  Q
    |||||||||| |||||| |||||||||||  || |||||||  ||||  ||||||||| |||||||||| ||||||||||    
T  27067233 atgaagcacggacactcctcggattagac--gttccggtgttcgacacatgtcgtgtccgacaccgacacgacactgaca 27067310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 29776109 - 29776016
Alignment:
Q  175 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||| ||||| ||| | |||| |||||||||  ||||||||||| | ||||||||||| |||||||||| |||||||  ||||| | ||||||||    
T  29776109 gtgtccgacactgacttaacaccgacatataa--ttatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtc 29776016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 36450696 - 36450760
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||||||  |||||| ||||||||| ||||||| ||||||||||| | |||||||| ||||||    
T  36450696 atgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacc 36450760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 38079112 - 38079049
Alignment:
Q  126 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 189  Q
    |||||| ||||| ||| ||||| ||||| |||||||||||||||| |||||||| |||| ||||    
T  38079112 agcacggacacttttcagattatacgtggcccggtgtcggacatgcgtcgtgtccgacatcgac 38079049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 126295 - 126357
Alignment:
Q  128 cacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||| |||||| ||||||||| ||||||||||| | ||||| |||||||||| ||||| ||||    
T  126295 cacggacactcctcggattagccgtgtcccggtattggacacgtgtcgtgtccgacactgaca 126357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 4611614 - 4611528
Alignment:
Q  170 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtg 256  Q
    |||||||||| || |||||||   ||| || | ||| ||||| ||||||| |||| |||||||| ||||||||||||||||| ||||    
T  4611614 gtgtcgtgtccgataccgacacagcaccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 25192363 - 25192441
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||||||||| |||| | ||| || |||||||||| ||||||  |||||||| ||||| || |||||| |||||||    
T  25192363 aattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgt 25192441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 40064075 - 40064033
Alignment:
Q  126 agcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  40064075 agcacggacactcctcggattagatgtgtcccggtgtcggaca 40064033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 44067646 - 44067466
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca-tgacactgacatataaaattatactga 217  Q
    |||||||||||| |||||| ||| ||||| ||||||| ||||||||||| |  || ||||| |||| |||||  ||||| ||||  || ||||| ||||     
T  44067646 caatgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgaca-cgacaccgacac-gacacttataattacactgt 44067549  T
Q  218 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    || |||| |||||||| |||||||| | ||||||  |||||||| || ||||  |||| ||||||||||| ||| || |||||    
T  44067548 attatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccgtgct 44067466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 17751773 - 17751704
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 190  Q
    ||||||| || |||||| ||||||||| ||||||||||||||||  ||| ||| ||||| ||||||||||    
T  17751773 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 17751704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 17760760 - 17760691
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 190  Q
    ||||||| || |||||| ||||||||| ||||||||||||||||  ||| ||| ||||| ||||||||||    
T  17760760 atgaagcgcggacactcctcggattaggcgtgtcccggtgtcggctatgcgtctgtgtccgacaccgaca 17760691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 18067956 - 18067993
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  18067956 actgaattatgtgattttctcaaattattagcggtgtc 18067993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 18407836 - 18407779
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    |||||||||| |||||| ||  ||||| |||||||  |||||||||||||||||||||    
T  18407836 atgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtc 18407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 949207 - 949275
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||||| || || ||||||  ||||| |||||||||| ||||||||| || | ||||||||    
T  949207 atgaagcacgaacattcctcagattaggagtgtctcggtgtcggatatgtgtcgtatccggcaccgaca 949275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 3025609 - 3025557
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagc 244  Q
    ||||||||||  || ||||| ||||||| ||||||||||||| ||||||||||    
T  3025609 gacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 24413501 - 24413569
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||  ||||||||||||||||||| ||| ||||| |  ||||||| ||||| ||||    
T  24413501 atgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgaca 24413569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 270
Target Start/End: Original strand, 31236584 - 31236656
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    |||| ||| ||||| | ||||| ||||||||||||| |||||||||| ||||||  ||||| |||||| ||||    
T  31236584 gacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtatccttgtc 31236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 31557033 - 31556962
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||| |||||||||| || |||||||| | ||||||  ||||||||  || |||||||||||||||||||    
T  31557033 actgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgt 31556962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 39954295 - 39954339
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||| ||| ||||||||||||| |||||||||||||||||    
T  39954295 aattacactaaattatgtgattttctcaaattattagcggtgtcg 39954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 9828172 - 9828043
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||| |||| ||||||||| ||||||| |    
T  9828172 atgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaatta 9828073  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||| || ||||||||| |||||||    
T  9828072 tgtgattttatcaaattattagtggtgtcg 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 40917877 - 40917714
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| ||| || ||||||||| ||||||||||||||||||| ||||||||||  ||||||||| ||||| || |  |  ||||| ||| |||      
T  40917877 atgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaat-- 40917780  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||||| || |||||||||| ||||||  ||||||||||||||||| ||||||||||||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 25362010 - 25361885
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| ||||||||||||||||  |||| ||||||||||||||||  |||||| |||||||||| |||||||||| ||| ||||| ||||||| |    
T  25362010 atgaagcacggacactcttcggattag--gtgttccggtgtcggacatgt--cgtgtccgacaccgacacgacactgacacatataattacactgaatta 25361915  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    |||||||||||| |||||| || |||||||    
T  25361914 tgtgattttctcaaattatcagtggtgtcg 25361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 258
Target Start/End: Original strand, 9629856 - 9629967
Alignment:
Q  147 agacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcgg 246  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||  || ||| | ||||||| || ||||||| || ||||||||||||    
T  9629856 agacgtgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcgg 9629955  T
Q  247 tgtcgatgtgtc 258  Q
    ||||||||||||    
T  9629956 tgtcgatgtgtc 9629967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 1486646 - 1486805
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||||| |||||||||      |||||| ||||| ||||  || ||||| ||||||| |    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||||| || |||||||||| |||||   ||||||||||||||||| | |||||| |||||||    
T  1486740 tgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgt 1486805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 5944411 - 5944248
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||| | || ||||| ||||| ||||  || ||||| ||||||| |    
T  5944411 atgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaatta 5944312  T
Q  222 tgtga--ttttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    |||||  |||| || |||||||||| ||| ||  |||||||| || ||||| |||||| |||||    
T  5944311 tgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtcc 5944248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 38503428 - 38503283
Alignment:
Q  140 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatta 239  Q
    |||||||||  ||||||| | ||| |||||||||| |||| |||  ||||| ||||| |||| ||| ||||| ||||||  || |||||||||| |||||    
T  38503428 tcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgac--cgacaggacaccgacacatataattacactgaaatatatgattttctcaaatta 38503331  T
Q  240 ttagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||||||||||| ||||| ||| |||||||||||||| ||||||||||    
T  38503330 ttagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgt 38503283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 294
Target Start/End: Complemental strand, 47989625 - 47989454
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  47989625 atgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 47989526  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatc 294  Q
    ||||||||| |  ||||||||   ||||||  |||||||| || ||||| |||| ||| ||||||| ||||||    
T  47989525 tgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctgtatc 47989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 277
Target Start/End: Original strand, 5898211 - 5898352
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 224  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||          |||||  ||||| ||||||| ||||    
T  5898211 aagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac---------gcatat--aattacactgaattatgt 5898299  T
Q  225 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    |||||| ||  ||||||||||||||||  || ||||| || ||||||||||||    
T  5898300 gattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 270
Target Start/End: Original strand, 6414933 - 6415080
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| |||||| | | ||||| ||||||| |||| |||||||||| |||| ||| ||||||| |||| ||  ||||| |||| || |    
T  6414933 atgaagcacggacactcctcggatgaaatgtgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtatta 6415031  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    |||||||||||| ||| ||||||| |||||  |||||||| ||||||||    
T  6415032 tgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 16252853 - 16252965
Alignment:
Q  158 ggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 257  Q
    |||||| ||||| |||||||||| |||||||| | ||||  ||| ||| ||||| |||||||||| | ||||||| ||||||||| |||||| ||||| |    
T  16252853 ggtgtcagacatatgtcgtgtctaacaccgacctaacacgaacacatataattacactgaatcatatcattttcttgaattattaacggtgttgatgtat 16252952  T
Q  258 cagtatccgtgtc 270  Q
    |||||||||||||    
T  16252953 cagtatccgtgtc 16252965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 20157346 - 20157441
Alignment:
Q  187 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    |||| ||||| |||| |||  |||| ||||||| |||||||||||||  ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtc 20157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 27471525 - 27471636
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    ||||||||||||||||||| ||||||| ||  ||||||| |||||||  ||| ||  ||||| ||||||| ||||| ||||||| ||||||||||||| |    
T  27471525 cgtgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtat 27471624  T
Q  250 cgatgtgtcagt 261  Q
    || |||||||||    
T  27471625 cggtgtgtcagt 27471636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 285
Target Start/End: Original strand, 31694641 - 31694804
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||| ||||| ||||||||| | |||||| ||||| |||||||||| ||||| ||||  |  ||||||||||||| |    
T  31694641 atgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaatta 31694740  T
Q  222 tgtga--ttttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    |||||  |||| || ||||||||||  |||||| || ||||| ||  |||| ||||||||||||||    
T  31694741 tgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccggtgtccgt 31694804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 294
Target Start/End: Complemental strand, 34298479 - 34298392
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatc 294  Q
    ||||| ||||||| ||||||||||||| ||||||||| ||||||| ||||||||| |||||||| |||| ||||| ||||| ||||||    
T  34298479 aattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgtctgtatc 34298392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 207 - 284
Target Start/End: Original strand, 398781 - 398858
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccg 284  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||  |||||||| |||||||| |||||||||||||    
T  398781 aattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 22515829 - 22515897
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||| |||||||||||| ||||||||||    
T  22515829 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgaca 22515897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 40258875 - 40258943
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| | |||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  40258875 atgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgaca 40258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 286
Target Start/End: Original strand, 2896121 - 2896216
Alignment:
Q  191 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||| |||||||| |  || ||||||| ||||||||||||| |||||||||||||||||  |||||||| |||||||  |||||| ||||||||    
T  2896121 tgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtg 2896216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 6427592 - 6427513
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 201  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||| |||||||||| ||| || ||| ||||||||||    
T  6427592 atgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgaca 6427513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 300
Target Start/End: Original strand, 6612113 - 6612280
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 232  Q
    |||||| | ||||||| ||||||| |||||||||||  | ||||||| |||| ||||| ||||| ||||  |  ||||| ||||||| |||| ||||| |    
T  6612113 acactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaatttttt 6612212  T
Q  233 cgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    | |||||||| | || |||  |||||| | |||||||| |||||||||| |||||  |||||||||||    
T  6612213 caaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccgtatctgtgct 6612280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 34371843 - 34371714
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtc--ggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 219  Q
    ||||||||| |||||| || ||||| |||||||| |||| |   ||||| ||||||| || |||||| ||| ||||| |||| ||| ||||| |||||||    
T  34371843 atgaagcacaaacactttttggatttgacgtgtctcggtatattggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaat 34371744  T
Q  220 catgtgattttctcgaattattagcggtgtc 250  Q
     ||||||||||||| ||||||||||||||||    
T  34371743 tatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 287
Target Start/End: Original strand, 15641052 - 15641126
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||||||||||||||||  |||||||||| ||||||   ||||||| ||||||||||||||| |||||||||    
T  15641052 actgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgt 15641126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 43492450 - 43492504
Alignment:
Q  136 ctcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  43492450 ctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgaca 43492504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 17831485 - 17831601
Alignment:
Q  143 gattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 241  Q
    |||||| |||||||||||||||||||  ||||| |||| ||||| |||| |||   |||| |||  |||| ||||||| ||||||||||||| |||||||    
T  17831485 gattaggcgtgtcccggtgtcggacacatgtcggtgtccgacactgacacgac---gacacatatgattacactgaataatgtgattttctcaaattatt 17831581  T
Q  242 agcggtgtcgatgtgtcagt 261  Q
    ||||||||||  ||||||||    
T  17831582 agcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 44482311 - 44482234
Alignment:
Q  169 tgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcgg 246  Q
    ||||||||||| |||||||||| ||||| |||| ||| ||||| ||||||| ||||||||||||| |||||| |||||    
T  44482311 tgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgattttctcaaattataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 1815362 - 1815306
Alignment:
Q  134 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||| || |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  1815362 cactcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgaca 1815306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 298
Target Start/End: Complemental strand, 17754439 - 17754263
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||| | ||| ||  ||||  | |||||  ||||| ||| |||||  |||||||||  ||||||||| ||| | ||| ||||||| |    
T  17754439 atgaagcacgaacactccttggactatccgtgctctggtgttagacatatgttgtgtccaacaccgacaccacactgacacatatagttacactgaatta 17754340  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtg 298  Q
    ||| ||||| || ||||||||||||||||| ||||||||  || ||||| | | |||||| | ||| ||||||||||    
T  17754339 tgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgttcatgtttgtatctgtg 17754263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 38078603 - 38078671
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||| |||| ||||||||| ||||||| ||||| | |||||||||||||| ||||||||||    
T  38078603 atgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgaca 38078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 29163321 - 29163391
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||||||||  || |||||| |||||||||||||| | || |||||||||| ||||||||||    
T  29163321 caatgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgaca 29163391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 7918207 - 7918312
Alignment:
Q  187 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||| |||||||||| ||| ||||| ||||||| ||||||||||||| ||||||||| | ||||   |||||| | || ||||| |||||||||||| ||    
T  7918207 gacacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatg 7918306  T
Q  287 tatgta 292  Q
    | ||||    
T  7918307 tctgta 7918312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 16164257 - 16164366
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 232  Q
    |||||||||||||||| ||||||| ||||||||||| |||| | |||  ||||| ||| |||| ||||| ||| ||||| | | ||| |||||||||| |    
T  16164257 acactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaattatgtgatttttt 16164356  T
Q  233 cgaattatta 242  Q
    | ||||||||    
T  16164357 caaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 42359390 - 42359459
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||   ||| |||| ||||||||||    
T  42359390 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgaca 42359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 52284809 - 52284764
Alignment:
Q  143 gattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 188  Q
    |||||||||||||  |||||||||||||||||||||||||||||||    
T  52284809 gattagacgtgtcttggtgtcggacatgtgtcgtgtctgacaccga 52284764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 9690215 - 9690267
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||| |||||    
T  9690215 atgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 270
Target Start/End: Original strand, 18556387 - 18556535
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  ||||||||| |||||||| |||||||| | |||||| ||||||||||| || |||||  | |  |  ||||| | | ||| |    
T  18556387 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaatta 18556486  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    |||||| || || |||||||||| ||||||  |||||||| ||||||||    
T  18556487 tgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 26238078 - 26238172
Alignment:
Q  153 gtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||| |||||||| |||| ||||| ||||||||||   |||||||| ||| | ||| ||||||| |||| |||||||| |||||||||||||||||    
T  26238078 gtcccggagtcggacacgtgttgtgtccgacaccgaca---cactgacacatata-ttacactgaattatgttattttctcaaattattagcggtgtcg 26238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 46348325 - 46348393
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||| | |||||| || |||||| |||||||||||| |||||||||| ||||||||||    
T  46348325 atgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 46348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 51410142 - 51410074
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||| | |||||||||| ||||||||||    
T  51410142 atgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgaca 51410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 10572572 - 10572683
Alignment:
Q  174 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 273  Q
    |||| |||||||| |||  |||| |||| ||  ||||| || |||| ||||||||||||| ||||||||| |||||||  |||||||| | | |||| ||    
T  10572572 cgtgcctgacaccaacacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtg 10572671  T
Q  274 tccggtgtccgt 285  Q
    ||||||||||||    
T  10572672 tccggtgtccgt 10572683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 277
Target Start/End: Complemental strand, 36906124 - 36905970
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||||| | |||||  ||||||| ||||| |||  | |||||||| ||||| ||||  || |  ||| ||| |||||  |||||| |    
T  36906124 atgaagcacggacactctt-gcattaggtgtgtcccagtgtcagacgcgggtcgtgtccgacactgacacaacgccaacacatataattactctgaatta 36906026  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||||||||||  |||||||||||||| | ||||||||| ||| || ||||||||    
T  36906025 tgtgattttctcagattattagcggtgttggtgtgtcagtgtccttgacatgtccg 36905970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 1262927 - 1262849
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||| ||||| ||||||||||||| |||||||||| ||||||  ||||| || | |||||| |||||||| |||||    
T  1262927 aattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggtatccgt 1262849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 22881569 - 22881611
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcg 164  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  22881569 atgaagcacggacactcctcggattagacgtgtcccggtgtcg 22881611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 25934744 - 25934634
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | |||| || ||| |||| ||||| |||| |||||||||| |||||||||| || || |||| ||| ||||| |||| ||      
T  25934744 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattt 25934645  T
Q  222 tgtgattttct 232  Q
    |||||||||||    
T  25934644 tgtgattttct 25934634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 29144322 - 29144368
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||    
T  29144322 atgaagcacggacactcttcggattaggcgtgttccggtgtcggaca 29144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 36878504 - 36878450
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||||||    
T  36878504 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 46940750 - 46940796
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  46940750 atgaagcacgaacactcctcggattaggcgtgttccggtgtcggaca 46940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 268
Target Start/End: Original strand, 12443476 - 12443537
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
    ||||| ||||||| ||||||||||||| |||||||||| ||||||  ||||| |||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 16812580 - 16812519
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgt 274  Q
    ||||||| |||||||||| || ||||||||  ||||||| ||||||||| ||||||||||||    
T  16812580 actgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtcatgt 16812519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 17778670 - 17778617
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg 175  Q
    ||||||||||||||||  ||||||||| | ||||||||||||||||| ||||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg 17778617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 18190061 - 18190118
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||| |||||||||  |||||||||||||||||| |||| |||||||||| |||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgaca 18190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 34741963 - 34741899
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatg-tgtcgtgtctgacacc 186  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||| | ||||||||| ||||||    
T  34741963 atgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacacc 34741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 37055872 - 37055964
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||| ||| |||| |||||||| |||||||||| || ||||||| ||||| || |||||||||||| ||| ||||| |||||| |||||    
T  37055872 aattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtcatgtccgatgttcgtgt-tgtatccgtgct 37055964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 5376483 - 5376587
Alignment:
Q  174 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 273  Q
    |||||| |||| ||||| ||||| ||||  |  ||||| ||||||| |||| |||||||  |||||||||||||||||  |||| ||| |||||||| ||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtg 5376582  T
Q  274 tccgg 278  Q
    |||||    
T  5376583 tccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 300
Target Start/End: Complemental strand, 9709854 - 9709770
Alignment:
Q  216 gaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||| ||||||||||||| ||||||||||||||| |   ||||||| |||||||| |||| | ||||| ||| |||||| |||||    
T  9709854 gaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatgtctgtatccgtgct 9709770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 15765875 - 15765795
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgaca 201  Q
    |||||||||| |||||||||||||||| |||||||| ||||| ||||   ||| |  ||||||||||||| ||||||||||    
T  15765875 atgaagcacggacactcttcggattaggcgtgtcccagtgtcagacacacgtcggcatctgacaccgacaagacactgaca 15765795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||||||| |||||| ||||||||| ||||||| |||||||||||   |||||||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 33203020 - 33202956
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||||||  | |||| ||||||||| |||||| |||||||||| |||| ||||||||||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 268
Target Start/End: Complemental strand, 40181976 - 40181855
Alignment:
Q  134 cactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctc 233  Q
    ||||| ||||||||| ||||||||||||| ||||| |||| ||||| |||||||| |         |||||||  ||| ||||||| |||||||||||||    
T  40181976 cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgata---------catataa--ttacactgaattatgtgattttctc 40181888  T
Q  234 gaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
     |||||||||| |||||  |||||| |||||||||    
T  40181887 aaattattagcagtgtc--tgtgtccgtatccgtg 40181855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 264
Target Start/End: Original strand, 48147967 - 48148111
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    |||||||||| | |||||||  |||||| ||||||||||||||  ||||  |||||||  || | | ||| ||||| |||||||| ||||| |||||||     
T  48147967 aatgaagcacaaccactctttagattaggcgtgtcccggtgtcatacatacgtcgtgttcgatatcaacacgacaccgacatatataattacactgaatt 48148066  T
Q  221 atgtga-ttttctcgaattattagcggtgtcgatgtgtcagtatc 264  Q
    || ||| |||| |  |||||||||||||||| |  ||||||||||    
T  48148067 atatgatttttttaaaattattagcggtgtcaacatgtcagtatc 48148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 21038161 - 21038086
Alignment:
Q  172 gtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 247  Q
    |||||||| |||||||||| |||||||||  |||  |||| ||||||| |||| |||||||  |||||||||||||    
T  21038161 gtcgtgtccgacaccgacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagcggt 21038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 277
Target Start/End: Complemental strand, 6427385 - 6427323
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||| ||||||||||||| ||||||||||||||| |  |||||||| |||||| | ||||||    
T  6427385 tgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 28674851 - 28674801
Alignment:
Q  199 acatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    ||||||| ||||||||||||| |||| |||||||| |||||||| ||||||    
T  28674851 acatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 52903363 - 52903317
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||| |||||||||| || || |||||||||||||||||||    
T  52903363 atgaagcacggacactcttcgaataagccgtgtcccggtgtcggaca 52903317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 2851058 - 2851002
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||||| |||| ||||| || ||||||||||||||| || |||||||||||||||||    
T  2851058 actgaattatgtaattttatcaaattattagcggtgt-gacgtgtcagtatccgtgtc 2851002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 12919062 - 12919005
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    ||||||||||||||||  |||||| || |||||||| ||||| |||| ||||||||||    
T  12919062 atgaagcacgaacacttctcggataagccgtgtccccgtgtcagacacgtgtcgtgtc 12919005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 16297299 - 16297392
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| |||||||  ||||||||| ||  |||||| || ||||||| |||||||||||||| || |||||| ||||| |||  ||||| |||||    
T  16297299 aattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgct 16297392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 17408819 - 17408730
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaatta 211  Q
    |||||||||  ||||||||| ||||||  || ||  ||||||||||| ||||||||||||| ||| |||  |||| |||||||| |||||    
T  17408819 atgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacacaacaccgacatatataatta 17408730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 19637890 - 19637817
Alignment:
Q  117 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||| |||| |||| || |||| |||||||||  | |||||||||||||| |||| ||||||| ||||||||||    
T  19637890 tatctatgatgcacaaatactcctcggattaggggcgtcccggtgtcggatatgtatcgtgtccgacaccgaca 19637817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 27965942 - 27966011
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    |||||||| | |||||| ||||||||| |||||||||||||| | || | | |||||||||||| |||||    
T  27965942 atgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacggacat 27966011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 15323206 - 15323126
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||| ||| |||||||||| || |||||||| | || ||||  ||||||| ||| |||| ||||||||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgt 15323126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 21530778 - 21530738
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||  ||||||||||||||||||||| ||||||||||    
T  21530778 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgaca 21530738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 25098571 - 25098615
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||    
T  25098571 aattacactgaattatgtgattttctcaaattatcagcggtgtcg 25098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 26830701 - 26830641
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    ||||||| |||||| || |||||| ||||||||||| ||| ||| |||| |||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac 26830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 31015086 - 31015006
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||| ||||||||||||| |||||||||| |||| |  | ||||||  ||||||| || |||||||| ||||    
T  31015086 aattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgt 31015006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 40285676 - 40285724
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||||| ||| ||||||||| ||||||||||||||| | |||||||||    
T  40285676 actgaattatgcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 32308248 - 32308109
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||| |||||||| |||||||||  ||||| |||||||||||||||||||||||  ||||||||| |||||||||| ||| ||||| ||||||| |    
T  32308248 atgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaatta 32308149  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||||||| |||||||||||||||||  ||||||||    
T  32308148 tgtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 285
Target Start/End: Complemental strand, 24339770 - 24339607
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||  ||||| ||||||||| ||||||||||||||||| | |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  24339770 atgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaatta 24339671  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||||| || |||||||||| ||||||  |||||| | ||| |||| ||||||||||||||    
T  24339670 tgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgt 24339607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 598325 - 598171
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||||||||||||||     || |||      |||| | | ||| |    
T  598325 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgaca-----cttaca------attacatttaatta 598237  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
     ||||||||||  ||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  598236 cgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgtgt 598171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 193 - 300
Target Start/End: Complemental strand, 17851488 - 17851381
Alignment:
Q  193 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgta 292  Q
    |||| |||| ||| ||||| ||||||| ||||||||||||  ||||||||||||| |||||||||| |||||| |||| |||||||||||||||| ||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgtgtctgta 17851389  T
Q  293 tctgtgct 300  Q
    || |||||    
T  17851388 tccgtgct 17851381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 1433576 - 1433418
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||||  |||| |||| |||||      ||||| |||| ||| ||||| ||  ||| |    
T  1433576 atgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac------gacaccgacacatataattacaccaaatga 1433483  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||||||||| |||||||| ||||||||  |||||| | |||||||| ||| |||||||||||    
T  1433482 tgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtg 1433418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 143 - 286
Target Start/End: Complemental strand, 19206157 - 19206014
Alignment:
Q  143 gattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatta 242  Q
    |||||| ||| | |||||||| || ||||||| | ||||||||| ||| ||||| |||| ||| ||||||| ||||| ||||||||||||| ||||||||    
T  19206157 gattagccgtattccggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgattttctcaaattatta 19206058  T
Q  243 gcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||||||  ||||  || |||||||| |||| ||| ||||||    
T  19206057 gcggtgtcggcgtgttggtgtccgtgtcgtgtctggtatccgtg 19206014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 284
Target Start/End: Original strand, 43027406 - 43027562
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||      ||||| ||||  |  | ||| |||| || |    
T  43027406 atgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac------gacaccgacacttgtatttacactgcatta 43027499  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccg 284  Q
    ||||||||| || |||||||||| | ||||  |||||||| |||||||| ||||| |||||||    
T  43027500 tgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccg 43027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 26329354 - 26329484
Alignment:
Q  163 cggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagta 262  Q
    |||||| ||||||||||||||||||||| ||| | |||| ||| ||||| |||||||  |||| ||||||| |||||||| || |||||  ||||||||     
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtg 26329453  T
Q  263 tccgtgtcatgtccggtgtccgtgtatgtat 293  Q
    || ||||| ||||| |||||||||| |||||    
T  26329454 tctgtgtcgtgtccagtgtccgtgtctgtat 26329484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 5409773 - 5409945
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||      |||||| ||||| ||||  |  ||||  ||||||| |    
T  5409773 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaatta 5409866  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||| || |||||||||| || ||   |||||||| ||| |||| | ||||||||| |||| |||||| |||||    
T  5409867 tgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccgtgct 5409945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 7438834 - 7438705
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | | ||||| |||||||  |||||| ||||||||||||| ||||||||||||||||| ||||  |  ||||| | ||||| |    
T  7438834 atgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaatta 7438735  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||| || |||||||| | ||||||    
T  7438734 tgtgattttttcaaattattaactgtgtcg 7438705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 11665371 - 11665492
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| ||| || ||| |||||| ||||  |||||||||||| |||||||||  |||||||||||||||  ||||  || ||||| ||||||| |    
T  11665371 atgaagcacggacattcctcgtattagatgtgtttcggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaatta 11665470  T
Q  222 tgtgattttctcgaattattag 243  Q
    ||||||||| || |||||||||    
T  11665471 tgtgattttttcaaattattag 11665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 26033389 - 26033514
Alignment:
Q  119 tcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaa 218  Q
    |||||||| |||| |||||| |||||||||  ||||| |||| ||||||| ||||| ||||||||||||||| || || ||||  |  ||||| ||||||    
T  26033389 tcaatgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaa 26033488  T
Q  219 tcatgtgattttctcgaattattagc 244  Q
    | |||||||||| || ||||||||||    
T  26033489 ttatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 15680926 - 15680858
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||| |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  15680926 atgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 15680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 21880269 - 21880201
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||  ||||||||| ||||||| |||||||||||||||||||||| ||||||||||    
T  21880269 atgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgaca 21880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 33994329 - 33994261
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||| ||||||||||| | ||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  33994329 atgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgaca 33994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 21831903 - 21831828
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacact 197  Q
    |||||||| ||||||||||  |||||||| |||| || ||||| ||||||||||||| ||||||||||||||||||    
T  21831903 atgaagcatgaacactcttaagattagacttgtctcgatgtcgcacatgtgtcgtgtttgacaccgacatgacact 21831828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 26733347 - 26733272
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    ||||| ||||||| |||||||||| || |||||||||||||||||| |||||||| |||||||| |||| ||||||    
T  26733347 aattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtc 26733272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 9778622 - 9778458
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | ||||||| ||||||||||||||||||| |||| ||||      |||||| ||||| ||||  |  ||||||||||||| |    
T  9778622 atgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt------ccgacacgacaccgacacttgtaattatactgaatta 9778529  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||| || |||||| |||        ||||||||| |||||||| ||||||||||||||||  ||||| |||||    
T  9778528 tgtgattttttcaaattatcagc--------tgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgct 9778458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 285
Target Start/End: Complemental strand, 27945084 - 27945006
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||| ||||||| |||| |||||||| ||||||||| |||||||  |||||||| |||||||| ||||||||||||||    
T  27945084 aattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 27945006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 9408264 - 9408404
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    ||||||||||| ||| |||||||||||| |||||   ||||||||| || | |||||||||||||||| | ||||| ||||  |  ||||| ||| |||     
T  9408264 aatgaagcacggacattcttcggattaggcgtgttttggtgtcggatatatatcgtgtctgacaccgatacgacaccgacacttgtaattacactaaatt 9408363  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||||| || ||||||||   |||||| |||||||||    
T  9408364 atgtgattttttcaaattattaattgtgtcggtgtgtcagt 9408404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 286
Target Start/End: Original strand, 11722121 - 11722193
Alignment:
Q  214 ctgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||| ||||||||||||| |||| ||||||||||||  |||||||| |||||||| |||||||| ||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtg 11722193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 20549908 - 20549780
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||  ||||| ||||||||| |||||| |  |||||||||||||| ||||| ||||||||||         |||||||  ||| ||||||| |    
T  20549908 atgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgaca---------catataa--ttacactgaatta 20549820  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
     ||||||||||| ||||||||||||||||| |||||||||    
T  20549819 cgtgattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 21864925 - 21864857
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||  |||||| ||| ||||||||||||||||||||||||| |||||||||| |||| |||||    
T  21864925 atgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgaca 21864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 32093956 - 32094020
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgt-cccggtgtcggacatgtgtcgtgtctgacac 185  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||| |||||    
T  32093956 atgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 5236049 - 5235936
Alignment:
Q  187 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||| ||||| || ||||| ||||| ||| ||| || | |||||||  |||||||||||||||||| |||||||| || ||||| |||||  |||||||     
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgta 5235950  T
Q  287 tatgtatctgtgct 300  Q
    | ||||||||||||    
T  5235949 tttgtatctgtgct 5235936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 22484142 - 22484005
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  |||||| |||| |||| || ||||||||||||||| ||||||||||||||         ||||||  ||||||||||||| |    
T  22484142 atgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgac---------acatat--aattatactgaatta 22484054  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||  |||||||  |||||||||||||||||  |||||||| || |||||    
T  22484053 tgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 2334377 - 2334270
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||| |||| |||||| |||||||||||||||  | ||||||||||||||||||||| |||| ||||| ||||| ||||  |  ||||| ||| ||| |    
T  2334377 atgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgaca-cgacacgacaccgacacttgtaattacactaaatta 2334279  T
Q  222 tgtgatttt 230  Q
    |||||||||    
T  2334278 tgtgatttt 2334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 13770810 - 13770750
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| |||| ||||| |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 32287405 - 32287473
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||  |||| |||| ||||||||||    
T  32287405 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgaca 32287473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 191
Target Start/End: Original strand, 7973087 - 7973134
Alignment:
Q  144 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  7973087 attagacgtgtcccgatgtcggacatgtgtcgtgtctcacaccaacat 7973134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 277
Target Start/End: Complemental strand, 15902922 - 15902795
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    ||||||| ||| |||| ||||||||||||| || |||||||  |||| |||| ||| ||||| ||| ||| |||||||||| || ||||||||  |||||    
T  15902922 cgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgt 15902823  T
Q  250 cgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||   ||||||| || ||||| ||||||    
T  15902822 cggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 43250036 - 43249957
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    ||||| |||| || |||| |||||||| |||||||| | ||||||  |||||||| |||||||| |||||||||||||||    
T  43250036 aattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgtg 43249957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 1885577 - 1885523
Alignment:
Q  246 gtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||||||| ||||| ||||| |||||||||||||||| |||||| |||||    
T  1885577 gtgtcgatgtgtccgtatcagtgtcgtgtccggtgtccgtgtctgtatccgtgct 1885523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 9933364 - 9933225
Alignment:
Q  159 gtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 258  Q
    ||||| ||||||||||||||| |||||||||| |||||||||| ||  || | |||||||  |||||||||| || |||||||||   ||| || |||||    
T  9933364 gtgtcagacatgtgtcgtgtccgacaccgacacgacactgacacat--aagtttactgaaatatgtgattttttcaaattattagtaatgttgacgtgtc 9933267  T
Q  259 agtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    | | |||| ||| |||| | | ||||||| ||||||| ||||    
T  9933266 aatttccgcgtcgtgtctgatatccgtgtctgtatctatgct 9933225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 10043041 - 10043007
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgt 176  Q
    |||||||||||||||||||||||||||||||||||    
T  10043041 ggattagacgtgtcccggtgtcggacatgtgtcgt 10043007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 174
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 3554448 - 3554517
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    |||||||||  |||||||||| |||||||||||| | ||||  || |||||||||||| |||||||||||    
T  3554448 atgaagcacagacactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacat 3554517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 8234243 - 8234198
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccg 187  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 276
Target Start/End: Original strand, 8842318 - 8842420
Alignment:
Q  170 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgt 269  Q
    ||||||||||  ||||||||| |||||||||| |||    || || |||||||||||||||||| |||| ||||| |||||| ||| | ||| |||||||    
T  8842318 gtgtcgtgtccaacaccgacaagacactgacacata----tacacagaatcatgtgattttctcaaattcttagcagtgtcggtgtattagtgtccgtgt 8842413  T
Q  270 catgtcc 276  Q
    | |||||    
T  8842414 cgtgtcc 8842420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 30731080 - 30730987
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||||||| ||||||||||||| ||||||| |||||||||  ||| || | |  ||||| |||| |||||||||||  |||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgct 30730987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 20545186 - 20545242
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||  |||||| ||| |||| ||||||||| ||||||||||||||||||||    
T  20545186 atgaagcacagacactcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgt 20545242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 29787385 - 29787429
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  29787385 aattacactgaattatgtgattttctcaaattattagcggtgtcg 29787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 36297369 - 36297436
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    ||||| ||||||||||||  |||||||||| ||||||| |||||| | |||||||| ||||||||||||    
T  36297369 tgaattatgtgattttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccggtgtcc 36297436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 3294257 - 3294300
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgt 176  Q
    |||||||||||||||| ||||||||||||| ||||| |||||||    
T  3294257 acactcttcggattaggcgtgtcccggtgttggacacgtgtcgt 3294300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 9482992 - 9482917
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    ||||| |||| ||| ||||| |||||||  |||||||||||| |||||| |||| ||||| ||||||||| |||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 21141004 - 21141091
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||| || |||||||||  ||||||||| |||||||| ||||| |  |||||||| ||| ||||||||||||  ||||| |||||    
T  21141004 actgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccgtgct 21141091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 185
Target Start/End: Original strand, 2533761 - 2533823
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    |||||||||||||||| ||||||||  |||||||||| |||||| | |||| |||||| ||||    
T  2533761 tgaagcacgaacactcctcggattacgcgtgtcccggcgtcggatacgtgttgtgtcttacac 2533823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 3721151 - 3721074
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||| |||| ||| ||||||||| ||| ||||||||||||| ||||||||||  ||||||  ||||||| ||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaattattagc-atgtcgaaatgtcagtgtccgtgtc 3721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 6490833 - 6490787
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||| |||||| ||||||||  |||||||||||||||||||    
T  6490833 atgaagcacggacactcctcggattaagcgtgtcccggtgtcggaca 6490787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 10359716 - 10359670
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  10359716 atgaagcacggacacctttcggattagacgtgtctcggtgtcggaca 10359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 22868097 - 22868031
Alignment:
Q  195 actgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||||| ||| ||||| ||||||| |||||||||||||  |||||||| |||||||  ||||||||    
T  22868097 actgacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 277
Target Start/End: Complemental strand, 24105721 - 24105651
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||| |||||||||||  ||||| || |||||||||| ||||||  |||||||| |||||||| ||||||    
T  24105721 aattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 24105795 - 24105749
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||| ||||||| |||| |||| |||||||||||||||||||    
T  24105795 atgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggaca 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 40131941 - 40131987
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||  |||||| |||||||||||||||||| ||||||||||    
T  40131941 atgaagcacagacactcctcggattagacgtgtccctgtgtcggaca 40131987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 285
Target Start/End: Original strand, 48246773 - 48246907
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    |||||||  |||||||||||||||||||| ||||  |||||||||| |   |||| ||||| | ||| |  |||||||||||| ||||| || | |||||    
T  48246773 gtgtcccaatgtcggacatgtgtcgtgtccgacattgacatgacaccggtttatataattacattgagttgtgtgattttctcaaattaataacagtgtc 48246872  T
Q  251 gatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    || |||||| | || ||||| ||| | ||||||||    
T  48246873 gacgtgtcattgtctgtgtcgtgttctgtgtccgt 48246907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 2425763 - 2425824
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    ||||||||||||| |||||||| ||||| ||  ||||||||||| ||||| ||||| |||||    
T  2425763 atgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtc 2425824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 31808544 - 31808600
Alignment:
Q  226 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    |||||||| |||||||| ||||| ||| |||||||| | |||||||||||||||||||    
T  31808544 attttctcaaattattatcggtg-cgacgtgtcagtgttcgtgtcatgtccggtgtcc 31808600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 42720891 - 42720960
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||||| ||| ||||| | | ||| |||||||||| || |||||||||||||||| | ||||||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagt 42720960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  227 ttttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtcc 276  Q
    ||||||| ||||||||||||||||| ||||||||  |||||||| |||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 7197271 - 7197307
Alignment:
Q  154 tcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  7197271 tcccggtgtcggacatgtgttgtgtccgacaccgaca 7197307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 294
Target Start/End: Original strand, 13557807 - 13557847
Alignment:
Q  254 gtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatc 294  Q
    |||||||| || |||||||||||||||||||||| ||||||    
T  13557807 gtgtcagtgtctgtgtcatgtccggtgtccgtgtctgtatc 13557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 18035807 - 18035858
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    |||||||||| |||||| ||||||||||||||| || ||||| ||||||||||    
T  18035807 atgaagcacggacactcctcggattagacgtgttcc-gtgtcagacatgtgtc 18035858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 269
Target Start/End: Original strand, 21828407 - 21828483
Alignment:
Q  193 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgt 269  Q
    ||||||||| ||| ||||| | || || ||||||||||||| ||||| || ||||||||  |||||||| |||||||    
T  21828407 acactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 23191939 - 23191895
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||||  ||||||||||||| |||||||||||||||||    
T  23191939 aattacactgaaatatgtgattttctcaaattattagcggtgtcg 23191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 30982809 - 30982984
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||  || ||||| ||||||  |    
T  30982809 atgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaata 30982908  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||||||| ||| |||||||||| |   ||||| || |||||||| | |||||||||| |||  ||||| |||||    
T  30982909 tgtgattttctcaaatcattagcggtggc---gtgtctgtgtccgtgtcgtatccggtgtccatgttcgtatccgtgct 30982984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 23292928 - 23293095
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||||         | | |||  ||||||||||| |    
T  23292928 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca---------cttgtaa--ttatactgaatta 23293016  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||| || |||||||||| ||||||  |||||| | |||||||| ||||||||||||||||  |||||||||||    
T  23293017 tgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgct 23293095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 36635447 - 36635287
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||||||||||||| |||||||||||||| |||  ||||||||||||||||     | ||||  ||| ||| ||||| ||||||| |    
T  36635447 atgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac-----tcacacgaacacatataattacactgaatta 36635353  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||||||||||| ||||||||| ||||| |  |||||||| |||| ||| ||||||||||| ||||    
T  36635352 tgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgt 36635287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 258
Target Start/End: Original strand, 24613632 - 24613768
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||  |  | ||| | ||||| |    
T  24613632 atgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaatta 24613731  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtc 258  Q
    |||||||||||| |||||||||  ||||||| |||||    
T  24613732 tgtgattttctcaaattattagttgtgtcgacgtgtc 24613768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 22234821 - 22234951
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||  |||||||||  |||||| ||||||||||| |||||||||| |||||||||| ||||| |||| ||| ||||| ||||||| |    
T  22234821 atgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaatta 22234920  T
Q  222 tgtga-ttttctcgaattattagcggtgtcg 251  Q
    ||||| |||| || |||| ||||||||||||    
T  22234921 tgtgatttttttcaaatttttagcggtgtcg 22234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 904030 - 903872
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 241  Q
    |||||||| ||||||| ||||||||||  |||||||||  ||||||| | || ||||| | ||| ||||| ||||||| ||||||||||||| |||||||    
T  904030 ggattagatgtgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgattttctcaaattatt 903931  T
Q  242 agcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    | ||||| || ||||||||| ||||| | ||||| || | ||||||  ||||| |||||    
T  903930 aacggtgccggtgtgtcagtgtccgttttatgtctggcgcccgtgtccgtatccgtgct 903872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 259
Target Start/End: Complemental strand, 47264114 - 47263977
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  || ||||||||||||| ||||||| |||||| |||||||||||| ||||||||| ||||||||  ||||| |  ||||| || |||| |    
T  47264114 atgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaatta 47264015  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtca 259  Q
    |||||||||  | ||||||||||  |||||| ||||||    
T  47264014 tgtgatttttacaaattattagctatgtcgacgtgtca 47263977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 29205591 - 29205528
Alignment:
Q  116 ttatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    ||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  29205591 ttatctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 19482796 - 19482618
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||| |||||||||  ||||||| |||||||||| ||||||||||  | ||||||| |||||  |||  |  ||||| || |||| |    
T  19482796 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaatta 19482697  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||| || || |||||||||  ||||||  |||||||| || ||||| |||| |||||| ||||  ||||| |||||    
T  19482696 tgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtgct 19482618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 24343630 - 24343457
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    |||||||||| |||||| || || ||| ||||||||||||||||||| | |||| |||| |||||||||| |||||       || ||||| |||||||     
T  24343630 atgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacc------tataattacactgaatt 24343537  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||| |||||||| |||||||| | ||||||  ||||| |  |||||||| |||||||||||||||| ||| || |||||    
T  24343536 atgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgct 24343457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 848079 - 847901
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||| |||| |||||| | |||||||  ||||||||||||  |||| || ||||||| |||||| ||| ||||| ||||  |  ||||||| ||||| |    
T  848079 atgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatta 847980  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||| |||||||| ||||||||||||  |||  |||||||| || ||||| ||||||| |||| |||  ||||| |||||    
T  847979 tgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgtatccgtgct 847901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 12797282 - 12797348
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||| || ||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgaca 12797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 260
Target Start/End: Original strand, 23861371 - 23861500
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||||| | ||||| ||||||  |||| | |||||||||||| ||||||||||||         ||||||| ||||| | |||||||    
T  23861371 atgaagcacgaacactctttgaattaggcgtgtcttggtgacagacatgtgtcgtatctgacaccgac---------acatatataattacattgaatca 23861461  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcag 260  Q
    ||||||||| || | ||||||||||||||| ||| ||||    
T  23861462 tgtgattttatcaatttattagcggtgtcggtgtttcag 23861500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 300
Target Start/End: Original strand, 44081509 - 44081686
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||||||||||||| |||||||| |||| | |||||| ||| ||||||||| ||| |  |||| | |||||||| ||| ||||| | | ||| |    
T  44081509 atgaagcacgaacactcttcagattagacatgtctcagtgtcgaacacgtgtcgtgtttgata-tgacacggcactgacacatataattacattaaatta 44081607  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    | ||||||| || |||||||| || | ||| ||||||||| ||| |||| |||||| ||| |||||  ||||| |||||    
T  44081608 tatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggtgct 44081686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 283
Target Start/End: Original strand, 5414103 - 5414264
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | |||| ||  ||||||| ||||| |||| |||||||||| ||||| |||| ||||| || | ||| ||||| |||| ||      
T  5414103 atgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattt 5414202  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    |||||||||||  ||  |||||| ||||||  ||||| || |||||||| ||||||||||||    
T  5414203 tgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtcc 5414264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 30522858 - 30522994
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 232  Q
    |||||||| |||||||||||||| ||||||| || ||||||||||| |||| ||||   ||| |  ||||||| | ||| ||||||| ||||||||||||    
T  30522858 acactctttggattagacgtgtctcggtgtcagatatgtgtcgtgtttgacgccgatccgac-ccaacatatatagttacactgaattatgtgattttct 30522956  T
Q  233 cgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    | ||| |||||||||||    || ||||||||||||||    
T  30522957 caaataattagcggtgtgagcgtatcagtatccgtgtc 30522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 274
Target Start/End: Original strand, 38148656 - 38148808
Alignment:
Q  122 atgaagcacgaacact-cttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    |||||| ||||||||| ||||| || || ||||| || ||||| || | ||||||||||  ||||| ||| ||||  ||||| |||||||| |||||||     
T  38148656 atgaagtacgaacacttcttcgaat-aggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaatt 38148754  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgt 274  Q
    ||||||||||||| || |||||||||||||||  ||||| | |||| |||||||    
T  38148755 atgtgattttctcaaactattagcggtgtcgaaatgtcattgtccgcgtcatgt 38148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 715547 - 715603
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  715547 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 715603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 752873 - 752929
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  752873 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 752929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 12895216 - 12895284
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||||||| ||||||||| ||||||||| ||||||| |  ||||||||| ||||||||||    
T  12895216 atgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgaca 12895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 19312463 - 19312355
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||| |||| |||||  || ||||||||||||| |||||||||||| ||||||| || |||| ||||| ||||| || |  || ||||| |||||||||    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  222 tgtgatttt 230  Q
    |||||||||    
T  19312363 tgtgatttt 19312355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 34306746 - 34306814
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||||| || || |||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  34306746 atgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 34306814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 14465007 - 14465070
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    |||||||||| |||||| || ||||||||||||||| |||||| ||| ||||||||||||||||    
T  14465007 atgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 3947703 - 3947826
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| |||||||||  |||||| ||||||||||| |||||||||      |||||| ||||||||||  |  ||||| ||||||| |    
T  3947703 atgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgt------ccgacacgacactgacacttgtaattacactgaatta 3947796  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    || |||||| || |||||||||| ||||||    
T  3947797 tgcgattttttcaaattattagctgtgtcg 3947826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 135 - 257
Target Start/End: Original strand, 5832638 - 5832760
Alignment:
Q  135 actcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcg 234  Q
    |||| ||||||||||||||||   |||||||||  |||||||||||||| | ||||  ||||  ||| | | || |||||| |||||| ||||||||||     
T  5832638 actcatcggattagacgtgtcttagtgtcggactcgtgtcgtgtctgacgcagacactacaccaacacaaataactatactaaatcatatgattttctca 5832737  T
Q  235 aattattagcggtgtcgatgtgt 257  Q
    |||||||||| ||||||| ||||    
T  5832738 aattattagcagtgtcgacgtgt 5832760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 4383447 - 4383351
Alignment:
Q  170 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    ||||||||| ||||||||||| ||||||||||| |  ||||| ||||||| |||||||||| || |||||||||  || |||| |||||||| |||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 13783324 - 13783231
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| |||||||  |||||| ||||| ||| ||||||||||||| ||||||||| |||||||||| |  | ||||||||| |||||| |||||    
T  13783324 aattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtcatttgagatgtccgtgtctgtatccgtgct 13783231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 275
Target Start/End: Original strand, 22440616 - 22440684
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 275  Q
    ||||| ||||||| ||||||||||||| |||||||| |||||||||||| ||||| ||| |||| ||||    
T  22440616 aattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtc 22440684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 300
Target Start/End: Original strand, 27706110 - 27706286
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 223  Q
    |||||||| ||| || || |||||| ||||||||||| ||||| | |||||||||| ||||   ||| |||||| |||  |  ||||| ||| ||| |||    
T  27706110 gaagcacgtacattcctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatg 27706209  T
Q  224 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||| |  ||||||||   ||||||| |||||||| ||| |||| |||| |||||||||||  ||||| |||||    
T  27706210 tgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 28964190 - 28964258
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| | |||||| ||||||||| |||||||| |||||||| |||||||||||| ||||| ||||    
T  28964190 atgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagaca 28964258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 35157927 - 35157995
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||  ||||||||  ||||| ||||||| |||||||||||||||| ||||||||||    
T  35157927 atgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgaca 35157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 8423719 - 8423778
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||| || ||||| ||||||| ||||||||||||| |||||||||||||||||    
T  8423719 gacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 20743210 - 20743277
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 190  Q
    |||||||| |||||| |||||||||| |||| ||||||||||||| ||||| |||||||||| |||||    
T  20743210 gaagcacggacactcatcggattagatgtgttccggtgtcggacacgtgtcggtgtctgacatcgaca 20743277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 21945546 - 21945467
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    ||||| ||||||| |||| ||||| || |||||||||| ||||||   ||||||| || |||||||||||||||||||||    
T  21945546 aattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtccgtg 21945467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 4157268 - 4157198
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||  |||||| ||| |||||  || || ||||||||||||||||||||||| ||||||||||    
T  4157268 caatgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 4157555 - 4157485
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||   |||||| ||| ||||| ||| || ||||||||||||||||||||||| ||||||||||    
T  4157555 caatgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 5775353 - 5775452
Alignment:
Q  186 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagta---tccgtgtcatgtccggtgtc 282  Q
    ||||||||||| |||| ||| ||||| ||| ||| ||||||||||||| ||||||||  ||||||| ||||||||||   |||||||| ||||| |||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg-tgtgtcagtagtgtccgtgtcgtgtcctgtgtc 5775451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 33950165 - 33950099
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||||||||||| |||||||||||| || || |||||||| | ||||| ||||| |||||||||||    
T  33950165 atgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctggtgtccgtgt 33950099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 8423660 - 8423729
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    |||| ||||| |||||  || |||||| |||||||||||||||||||  ||||||||| |||||||||||    
T  8423660 atgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacat 8423729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 20633500 - 20633435
Alignment:
Q  235 aattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||||||||||||| |||||||| ||||| || |||| |||||||||||  ||||| |||||    
T  20633500 aattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgct 20633435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 21945609 - 21945552
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||| ||||||||| |||||  |||||||||||||||||| |||| ||||||||||    
T  21945609 acactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgaca 21945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 35161153 - 35161096
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    |||||||||| ||||| ||||||||||  |||| ||||||||||||| ||||||||||    
T  35161153 atgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtc 35161096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 35723374 - 35723455
Alignment:
Q  181 gacaccgacatgacactgacatataaaattatactgaatcatgtg-attttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||| | |||||||||| ||| ||||| | ||||| ||||| |||||||| |||||||||||||||||  ||||||||    
T  35723374 gacaccgatacgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 37203369 - 37203324
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggac 167  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||    
T  37203369 atgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 46715416 - 46715461
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||    
T  46715416 tgaagcacgaacactcctcggattagacatgtgccggtgtcggaca 46715461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 49431132 - 49431075
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||| |||||| || ||||||||||||| ||||| |||||||||| ||||||||||    
T  49431132 acactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgaca 49431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 3064870 - 3064926
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||| |||||| ||||||||| |||||| | | ||||||||||||||||||    
T  3064870 atgaagcacggacactcctcggattaggcgtgtctcagagtcggacatgtgtcgtgt 3064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 16073511 - 16073443
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| | |||||| ||||||||| ||||||   ||||||||||||| ||||||| ||||||||||    
T  16073511 atgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgaca 16073443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 29205533 - 29205493
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  29205533 cgtgtcccggtgtcggacatgtgtcgtgtccaacaccgaca 29205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 7214468 - 7214523
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtg 177  Q
    ||||||||| |||| || ||||||||| | | ||||||||||||||||||||||||    
T  7214468 atgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgtg 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 249
Target Start/End: Original strand, 21658797 - 21658872
Alignment:
Q  174 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    |||||| ||||| ||||||| || ||||  |||||||||| | ||| ||||||||||||| ||||||||| |||||    
T  21658797 cgtgtccgacactgacatgaaaccgacacttaaaattatagtaaattatgtgattttctcaaattattagtggtgt 21658872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 21873309 - 21873356
Alignment:
Q  127 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21873309 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtc 21873356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 21929170 - 21929217
Alignment:
Q  127 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    |||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21929170 gcacaaacactccttggattagacgtgtcccggtgtcggacacgtgtc 21929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 268
Target Start/End: Complemental strand, 30838335 - 30838192
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 224  Q
    ||||||| |||||| |||| |||| ||||||  ||||||||||| |||||| ||| ||||| |||| ||||| || |  || ||||| ||| ||| || |    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattatat 30838236  T
Q  225 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
     ||||| || |||||||||| || |||| || ||||| ||||||    
T  30838235 aattttatcaaattattagcagtatcgacgtatcagtgtccgtg 30838192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 40179652 - 40179727
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    ||||| ||||||| |||||||||| || || |||||  |||||| | |||||||| |||||||||||| |||||||    
T  40179652 aattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtc 40179727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 11931408 - 11931279
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    |||||||||| ||||||   |||||||  |||||| ||||||||||||| ||| ||||| || ||||||||||||  |||| ||| | ||| ||| |||     
T  11931408 atgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgacatgacatcgacacatatatttacactaaatt 11931310  T
Q  221 atgtgattttctcgaattattagcggtgtcg 251  Q
    |||||||||| ||  ||||||| ||||||||    
T  11931309 atgtgattttttcatattattaacggtgtcg 11931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 30094126 - 30094084
Alignment:
Q  126 agcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||| |||||||||||||||| |||||||||||||| ||||    
T  30094126 agcacggacactcttcggattaggcgtgtcccggtgtccgaca 30094084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 482180 - 482237
Alignment:
Q  117 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    ||||||||||||| | |||||| ||||||||||||||| | |||||| |||| |||||    
T  482180 tatcaatgaagcatggacactcatcggattagacgtgttcaggtgtcagacacgtgtc 482237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 21345475 - 21345544
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    |||||||||  | |||| ||||||||| | ||| ||||||| ||| |||| |||||||||||||||||||    
T  21345475 atgaagcacacatactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgacat 21345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 30103310 - 30103367
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||| |||||||||| |||||| | |||| ||||| |||||||| |||||||||||    
T  30103310 acactcctcggattagatgtgtcctgatgtcagacatatgtcgtgtttgacaccgaca 30103367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 30299046 - 30299009
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccgg 159  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30299046 atgaagcacggacactcctcggattagacgtgtcccgg 30299009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 30327914 - 30327877
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccgg 159  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  30327914 atgaagcacggacactcctcggattagacgtgtcccgg 30327877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 36409469 - 36409502
Alignment:
Q  145 ttagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||||||||||| |||||||||||||||    
T  36409469 ttagacgtgtcccggtgtaggacatgtgtcgtgt 36409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 36423635 - 36423668
Alignment:
Q  145 ttagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||||||||||| |||||||||||||||    
T  36423635 ttagacgtgtcccggtgtaggacatgtgtcgtgt 36423668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 40179596 - 40179645
Alignment:
Q  140 tcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgac 189  Q
    ||||||||| ||||||  ||||||| |||||||||||||| |||||||||    
T  40179596 tcggattaggcgtgtcatggtgtcgaacatgtgtcgtgtccgacaccgac 40179645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 40613502 - 40613449
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    |||| ||| ||||| ||||||| ||||||||||||| || ||||||||||||||    
T  40613502 gacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 53381532 - 53381601
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgaca 190  Q
    |||||||||| |||||| |||||||||  |||||||||||||||| | | ||| ||||| ||||||||||    
T  53381532 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgaca 53381601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 1747255 - 1747211
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||    
T  1747255 aattaaactgaattatgtgattttctcaatttattagcggtgtcg 1747211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 12884349 - 12884401
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    |||||||||| |||||| |||||||||||||| |||| ||||| ||| |||||    
T  12884349 atgaagcacggacactcctcggattagacgtgccccgatgtcgaacacgtgtc 12884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 122 - 298
Target Start/End: Original strand, 263303 - 263479
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||| |||| |||||| ||||||||| ||||||  ||| ||| ||| ||||||||||||||||||||| ||||||||||  || ||||| ||||||| |    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtg 298  Q
    |||| ||||||| |||||||||| |||| ||  ||||||| |||||||| | ||| ||||||||||  |||||||||    
T  263403 tgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccgtatctgtg 263479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 241722 - 241558
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  ||||||||| ||||||||||||||||||| |||||||||| |||||| ||| ||||| ||||   | ||||| ||| ||| |    
T  241722 atgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaatta 241623  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||||||  | |||||||||| ||||||  |||||||| |||||||| |||||||||||||||    
T  241622 tgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtg 241558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 21522878 - 21522700
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  21522878 atgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaatta 21522779  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||| ||||| |  |||||||||| ||||||  |||||||| |||||||| ||||||||| ||||||  ||||| |||||    
T  21522778 tgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgct 21522700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 21533444 - 21533266
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||| ||||| |||||||| ||||||| |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |    
T  21533444 atgatgcacggacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaatta 21533345  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||| ||||| |  |||||||||| ||||||  |||||||| |||||||| ||||||||| ||||||  ||||| |||||    
T  21533344 tgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgct 21533266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 3966631 - 3966502
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||||||||||||  ||| |||||  ||| ||||| ||||| |||| ||||| |||| ||| ||||| |||||||      
T  3966631 atgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaattg 3966532  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    |||||||||||| |||||||||||||||||    
T  3966531 tgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 19579831 - 19579651
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 219  Q
    ||||||| |||| |||||| ||||||||| |||||||||||||  ||||| ||||||||| ||||| |||| ||||| ||||  |  ||||  ||| |||    
T  19579831 caatgaaacacgtacactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaat 19579732  T
Q  220 catgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
     ||||||||||||| |||||||||| ||||||  || ||||| |||||||  | ||||||||| ||||| ||||| |||||    
T  19579731 tatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgct 19579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 7677833 - 7677704
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  || ||| ||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||| ||||  |  ||||  ||||||| |    
T  7677833 atgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaatta 7677734  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||| || |||||||||| ||||||    
T  7677733 tgtgattttttcaaattattagctgtgtcg 7677704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 15382591 - 15382427
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtga--tttt 230  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||  |||||     ||||| ||||  |  ||||||||||||| || |||  ||||    
T  15382591 acactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacacc-----gacaccgacacttgtaattatactgaattatatgatttttt 15382497  T
Q  231 ctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
     || |||||||||| ||||||  |||||| | |||||||| ||||||||||||||||  ||||| |||||    
T  15382496 ttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgct 15382427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 125 - 275
Target Start/End: Original strand, 15410382 - 15410532
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 224  Q
    |||||||||||||| |||| |||||||||||||||||| |||||  |||||| ||  ||| |||||  ||||  ||| |||  |||| |||||||||| |    
T  15410382 aagcacgaacactcctcggcttagacgtgtcccggtgttggacacttgtcgtatcgaacatcgacacaacaccaacacatatgattacactgaatcatat 15410481  T
Q  225 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 275  Q
     |||||||  |||||||||||||||||  |||||||| |||||||| ||||    
T  15410482 aattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 32766874 - 32767003
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||||||| ||| ||||||||||| ||||||| |  |||||||||| |||||  ||| ||| ||||| | |||||      
T  32766874 atgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaattg 32766973  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    || ||||||||| |||||||||||||||||    
T  32766974 tgcgattttctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 298
Target Start/End: Complemental strand, 12927713 - 12927606
Alignment:
Q  191 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatg 290  Q
    ||||||||||||||| ||||| ||| ||| || |||||||||| ||||||||||| ||||| |||||| || || || |||||||| ||||| ||||||     
T  12927713 tgacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgtatcatgtccagtgtctgtgtata 12927614  T
Q  291 tatctgtg 298  Q
    ||||||||    
T  12927613 tatctgtg 12927606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 283
Target Start/End: Original strand, 22423802 - 22423904
Alignment:
Q  181 gacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtg 280  Q
    |||||||||| ||||| |||||||| ||||||| ||||| ||||||||||||| |||||||||  |||||   ||||||||||||||||| ||| || ||    
T  22423802 gacaccgacacgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgttcgatg 22423901  T
Q  281 tcc 283  Q
    |||    
T  22423902 tcc 22423904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 37328777 - 37328940
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||  ||| ||||||| ||||||  |  ||||||| |||||||||| ||||| |||| ||  ||||| |||||||      
T  37328777 atgaagcacggacactcctcggattaagcgtatcccggtatcggac--gcatcgtgtccgacaccgacacgacaccgacacatgtaattacactgaattt 37328874  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||||||||  | ||||||| || |||||| ||| ||||| |||||||| ||| ||||||||||||    
T  37328875 tgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtgt 37328940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 270
Target Start/End: Original strand, 7174954 - 7175098
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgt 224  Q
    |||||||||||||  ||  ||||| ||||||||  | ||||||| |||| |||| ||||| ||||| ||  |||||| ||| |||||| |  ||| ||||    
T  7174954 aagcacgaacacttctcaaattaggcgtgtccccttatcggacacgtgttgtgt-tgacatcgacacgatgctgacacatataattatgccaaattatgt 7175052  T
Q  225 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||    
T  7175053 gattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 123 - 251
Target Start/End: Complemental strand, 18592200 - 18592072
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 222  Q
    ||||||||| |||||| ||| ||||| ||||||||| |||| |||| |||| ||||| |||||||||| ||||| | || ||| ||||| | ||||| ||    
T  18592200 tgaagcacggacactcatcgaattagccgtgtcccgatgtcagacacgtgttgtgtccgacaccgacacgacaccggcacatataattacattgaattat 18592101  T
Q  223 gtgattttctcgaattattagcggtgtcg 251  Q
    || |||||||  || ||||||||||||||    
T  18592100 gtaattttcttaaaatattagcggtgtcg 18592072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 30098454 - 30098310
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| ||| || |||||||||  |||||| |||||| |||| |||||||||| ||||| |||  || || ||||| || ||||| | ||||| |    
T  30098454 atgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaatta 30098355  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccg 266  Q
    |||||||||||| |||||||| |||| |||  |||||||| ||||    
T  30098354 tgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 17123164 - 17123011
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||| |||||||||||| |||||||  ||||||||||           ||| |||| ||||  || |    
T  17123164 atgaagcacggacactcctcggattaggcgtgtcccg-tgtcggacatgtttcgtgtccaacaccgacat-----------atataattgtacttgatta 17123077  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||||||||||| ||||||||||||||| |  |||||||| ||| ||| ||||||| |||||||||    
T  17123076 tgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgt 17123011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 21190997 - 21191152
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    ||||||||||| |||||| ||||||||| |||||||||| |||||||| |||| ||||| ||||||     ||||||      |  ||||| |||||||     
T  21190997 aatgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacacc-----gacact------tgtaattacactgaatt 21191085  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||||||||| || |||||||||| ||||||   ||||||| |||||||| ||||||||||| ||||    
T  21191086 atgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgt 21191152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 300
Target Start/End: Complemental strand, 6401626 - 6401448
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| | |||| || ||| |||| ||||| |||| |||||||||| ||||| |||| ||||| |||| ||| ||||| |||| ||      
T  6401626 atgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattt 6401527  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||||||  ||   ||||  ||||||  ||||| || ||||||||  ||||||||||||||| |||||| |||||    
T  6401526 tgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctgtatccgtgct 6401448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 285
Target Start/End: Original strand, 19820330 - 19820488
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||| |||||||||||||||||||   |||||||| ||||       ||||| ||||  || |||| |||| ||| |    
T  19820330 atgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca---gtcgtgtccgacaggtgtccgacaccgacacttataattgtacttaatta 19820426  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||  |||||||| |||||||||||||||||  |||||||| |||||||| ||||||||||||||    
T  19820427 tg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgt 19820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 12264810 - 12264887
Alignment:
Q  172 gtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    ||||| ||||||||||| |||||| ||||| ||| ||||| |||||||||||| |||||||| ||| |||||||||||    
T  12264810 gtcgtatctgacaccgatatgacattgacacatataattacactgaatcatgtaattttctcaaataattagcggtgt 12264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 22299497 - 22299572
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    |||||||||||||||||||||||| |  |||||||||| |||||| ||||||| |||||||||| | ||||||||||    
T  22299497 aattatactgaatcatgtgatttt-ttaaattattagctgtgtcggtgtgtcaatatccgtgtcgtatccggtgtcc 22299572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 25817575 - 25817495
Alignment:
Q  170 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    ||||| |||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||| |  |||||||||| |||||    
T  25817575 gtgtcatgtctgacaccgacatgatactgacacatataatcatactgaatcatatgatttttttaaattattagcagtgtc 25817495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 30502330 - 30502446
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||||||| || | ||||||| | |||||| ||||||||||||||||||||| ||||||||||         |||||||  ||| ||||||| |    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca---------catataa--ttacactgaatta 30502418  T
Q  222 tgtgattttctcgaattattagcggtgt 249  Q
     ||||||||||| |||||||||||||||    
T  30502419 agtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 30542673 - 30542789
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||||||| || | ||||||| | |||||| ||||||||||||||||||||| ||||||||||         |||||||  ||| ||||||| |    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca---------catataa--ttacactgaatta 30542761  T
Q  222 tgtgattttctcgaattattagcggtgt 249  Q
     ||||||||||| |||||||||||||||    
T  30542762 agtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 13287421 - 13287508
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||| |||||||||| || |||||||| | ||||||| |||| ||| |||||||| ||||||||||||||||  ||||| |||||    
T  13287421 actgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgct 13287508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 21814389 - 21814279
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||||||| || | |||| || |||||||| ||| | |||| |||||||||| |||||||||| ||||| |||| ||| ||||| |||| ||      
T  21814389 atgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattt 21814290  T
Q  222 tgtgattttct 232  Q
    |||||||||||    
T  21814289 tgtgattttct 21814279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 144 - 282
Target Start/End: Original strand, 36642716 - 36642853
Alignment:
Q  144 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 243  Q
    ||||| ||||||||| ||||||||| |||||||||| |||||| ||||||||| ||||  || | ||| ||| ||  |||| | ||| || ||||||||     
T  36642716 attaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaaatatgtcactttttcaaattattaa 36642814  T
Q  244 cggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    | ||||||  |||||||| |||||||| |||||||||||    
T  36642815 ctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 36642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 251
Target Start/End: Complemental strand, 11686066 - 11685938
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||| |||| |  ||| | ||||| |||||||||| |||||||| | ||||| |||| ||| ||||| ||| ||| |    
T  11686066 atgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaatta 11685968  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    || || |||||| |||||||||||||||||    
T  11685967 tgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 287
Target Start/End: Complemental strand, 21542130 - 21541993
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||| ||||  |  ||||| ||||||| |||| || || |  |||||||||  ||||    
T  21542130 cgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgt 21542031  T
Q  250 cgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||   ||||| | || ||||| |||| |||||||||||    
T  21542030 cggcatgtcaatgtctgtgtcgtgtctggtgtccgtgt 21541993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 6770580 - 6770508
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||| ||||||||||||  |||||||||  |||||  ||||||||| |||||||||||| ||||||||||    
T  6770580 actgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgt 6770508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 19438388 - 19438332
Alignment:
Q  205 aaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||||| ||||||| ||||||||||||| |||||| |||| |||||||||||||||    
T  19438388 aaaattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcagt 19438332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 28588616 - 28588684
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| | |||||||||||||||  ||||||| |||||| || |||||||||||| ||||||||||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgaca 28588684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 250
Target Start/End: Original strand, 41091188 - 41091316
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||| || ||||||||||| |  |||||  ||||  ||||| ||| ||||  |||| ||||  |||| ||| ||||| ||||||| |    
T  41091188 atgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaatta 41091287  T
Q  222 tgtgattttctcgaattattagcggtgtc 250  Q
    |||||||||||| ||| |||||| |||||    
T  41091288 tgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 12641780 - 12641665
Alignment:
Q  144 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 243  Q
    |||||||||||| | |||||| ||| |||| |||||||||||| ||| ||||||||||  |  ||||||||| ||| |||||||||| |  ||||||||     
T  12641780 attagacgtgtctccgtgtcgaacacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttttaaattattaa 12641681  T
Q  244 cggtgtcgatgtgtca 259  Q
    |  |||||| ||||||    
T  12641680 ctatgtcgacgtgtca 12641665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 240
Target Start/End: Complemental strand, 14873639 - 14873527
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||||||| ||||| |||| | ||      |||||||||||| |||| ||| ||||| ||| ||| |    
T  14873639 atgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaaatta 14873546  T
Q  222 tgtgattttctcgaattat 240  Q
    |||| ||||||| ||||||    
T  14873545 tgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 16203796 - 16203899
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgt 291  Q
    ||||| |||| ||| ||||| ||| ||| ||| ||||||||| |||||||||| ||||||   ||| ||| |||||||||||| ||||||| |||| |||    
T  16203796 gacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgtgtctgt 16203895  T
Q  292 atct 295  Q
    ||||    
T  16203896 atct 16203899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 26205777 - 26205856
Alignment:
Q  208 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||| ||||||| |||| |||||||| || | ||| |||| |||| |||||||| ||| |||||||||||||||||||||    
T  26205777 attacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtgt 26205856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 21194068 - 21194122
Alignment:
Q  125 aagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    ||||||| |||||| ||||||||| |||| ||||||||| |||||||||||||||    
T  21194068 aagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtc 21194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 21351852 - 21351898
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||    
T  21351852 atgaagcacggacactcttcggattagacgtgttccagtgtcggaca 21351898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 16304368 - 16304425
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtc 179  Q
    |||||||||| ||| || |||||||||||||||| ||||||||| || ||||||||||    
T  16304368 atgaagcacggacattcctcggattagacgtgtctcggtgtcgggcacgtgtcgtgtc 16304425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 40131749 - 40131628
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||| |||| |||||| | ||| ||||||||||||  |||| ||||   ||||||||||||| ||| | ||||| || || || ||||| ||||||| |    
T  40131749 atgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactgaatta 40131650  T
Q  222 tgtgattttctcgaattattag 243  Q
    ||||||||| || |||||||||    
T  40131649 tgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 43001924 - 43001859
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    |||||||||||| |||||| ||||||||| ||||||| |||||  |||| |||||||||| |||||    
T  43001924 caatgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacac 43001859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 18421778 - 18421851
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtc----ccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||  |||||| ||||||||||||||||    |||||| ||||||||||||||||| ||| ||||||    
T  18421778 aatgaagcacagacactcctcggattagacgtgtcagtcccggtgccggacatgtgtcgtgtccgacgccgaca 18421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 41558707 - 41558779
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| |||| |||||||| ||||||||   ||||| |||||||||| |||||||| | ||||||||||||||    
T  41558707 tgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtccgtgt 41558779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 42893477 - 42893409
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| | |||||| ||  ||||| ||||||| ||||||||||| |||| ||||||||||||||||    
T  42893477 atgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgaca 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 6035558 - 6035472
Alignment:
Q  174 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||| |||||||| ||||| |||| ||| ||||| ||||||| || | |||| ||| |||||||||||||||||  ||||||||    
T  6035558 cgtgtctgtcaccgacacgacaccgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 30183655 - 30183556
Alignment:
Q  144 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 243  Q
    ||||| |||||||| |||||||||| ||||||||||||| ||| ||| ||||| ||||  |  ||||| || |||| ||||||| || || |||||||||    
T  30183655 attaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattag 30183556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 38816729 - 38816772
Alignment:
Q  225 gattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
    ||||||||| |||||||||||||||||  |||||||||||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 38816772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 2437028 - 2436982
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||| ||||||||| ||||||  |||||||||||    
T  2437028 atgaagcacgaacactcctcggattaggcgtgtcttggtgtcggaca 2436982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Complemental strand, 4105302 - 4105221
Alignment:
Q  207 aattatactgaatcatgtgat--tttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    ||||| ||||||| |||||||  ||| || |||||||||   |||||  |||||||||||||||||||||||||| ||||||    
T  4105302 aattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggtatccgtg 4105221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 261
Target Start/End: Original strand, 21351889 - 21351975
Alignment:
Q  175 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||| |||||||||||||||| ||||  |  ||||| ||||||| |||||| ||| || |||||||||  |||||| |||||||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagt 21351975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 22013429 - 22013379
Alignment:
Q  235 aattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    |||||||||| ||||||  |||||||| |||||||| ||||||||||||||    
T  22013429 aattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 22013379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 30098982 - 30099048
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||||||| | |||| || |||||||| ||||| |||| ||||||| || ||||||||||    
T  30098982 gaagcacgaacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtatccgacaccgaca 30099048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 34879392 - 34879318
Alignment:
Q  208 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    |||| ||||||| || |||||||||| |||| ||||||||| ||  ||||| |||||||||||| ||||| ||||    
T  34879392 attacactgaattatatgattttctcaaatttttagcggtgccggcgtgtccgtatccgtgtcaagtccgatgtc 34879318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 38464315 - 38464365
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtg 172  Q
    |||||||||  |||||| |||||||||  ||||||||||||||||||||||    
T  38464315 atgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtg 38464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 42469250 - 42469184
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||| |||||||| |||||||| | ||||||  |||||| |||||||||| ||| ||||||||||||    
T  42469250 atgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgt 42469184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 284
Target Start/End: Complemental strand, 6247665 - 6247588
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccg 284  Q
    ||||| ||||||| |||||||||| || |||||||||  ||||||  |||||||| | ||| || |||||||||||||    
T  6247665 aattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccg 6247588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Complemental strand, 41995506 - 41995421
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| |||||||||| ||||||||||||  ||||||  |||||||| || ||||| | ||| ||||||||||  ||||| |||||    
T  41995506 tgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgct 41995421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 17088402 - 17088362
Alignment:
Q  128 cacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||| |||||| ||||||||| |||||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggaca 17088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 17593730 - 17593778
Alignment:
Q  199 acatataaaattatactgaatcatgtgattttctcgaattattagcggt 247  Q
    ||||||| ||||| ||||||| | ||||||||||| |||||||||||||    
T  17593730 acatatataattacactgaattacgtgattttctcaaattattagcggt 17593778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 270
Target Start/End: Complemental strand, 27144515 - 27144443
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    |||| ||| ||||| ||| ||| ||||||||| ||| |||||||||||||||||  |||||||| || |||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 27932278 - 27932234
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||||| |||| |||||||| |||||||||||||||||    
T  27932278 aattacactgaattatgtaattttctcaaattattagcggtgtcg 27932234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 28588690 - 28588734
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| ||||||| ||||||||||||| |||||||| ||||||||    
T  28588690 aattacactgaattatgtgattttctcaaattattaccggtgtcg 28588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 243
Target Start/End: Original strand, 9678 - 9799
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| |||||||| |||||||||| |||| |||| ||||||||||||||||| ||| ||||| |||| ||| ||||| ||||||| |    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  222 tgtgattttctcgaattattag 243  Q
     ||||||||||| |||||||||    
T  9778 agtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 287
Target Start/End: Original strand, 15796225 - 15796390
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||||||||||||| ||||||| ||||| ||||||| ||||| |||| ||||| |||||| ||| ||||| ||||  |  ||||| ||||||| |    
T  15796225 atgaagcacgaacactctttggattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaatta 15796324  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    | ||||||| || |||||||| | ||||||  |||||| | |||||||| ||||||||||||||||    
T  15796325 tatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15796390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 8039766 - 8039893
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  | |||||||||||||  |||||||||||||||||||||| || |||| |||||||||| ||||| |||| ||| ||||| ||||||| |    
T  8039766 atgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaatta 8039865  T
Q  222 tgtgattttctcgaattattagcggtgt 249  Q
    | | |||||||| |||||||||||||||    
T  8039866 tataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 261
Target Start/End: Original strand, 4987221 - 4987361
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    ||||||| ||| |||||| ||||||||| ||||||||||||||||||| ||||||||||  ||||||||| | |||  |||  |  ||||| |||||||     
T  4987221 aatgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatt 4987320  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||||| || |||||||||| ||||||  ||||||||    
T  4987321 atgtgattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 286
Target Start/End: Original strand, 41961581 - 41961745
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  ||||||||| |||||||| |||||||||| |||||||||| || ||||||| ||||| ||||  |  ||||| || |||| |    
T  41961581 atgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataa 41961680  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    |||||| || || |||||||||  ||| ||  |||||||| || ||||| |||||||||||||||    
T  41961681 tgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtccgtg 41961745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 40993277 - 40993345
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||| | |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40993277 atgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 40993345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 259
Target Start/End: Complemental strand, 29508569 - 29508435
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaat 219  Q
    |||||||||||| |||||  | |||||||||||||||||||||||||| ||||||||||| |||||| ||||      |||| ||| ||||| |||||||    
T  29508569 caatgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacat-----cgacacatataattacactgaat 29508475  T
Q  220 catgtgattttctcgaattattagcggtgtcgatgtgtca 259  Q
     || ||||||| || ||||||||| ||| ||| |||||||    
T  29508474 tatatgattttttcaaattattagtggtatcggtgtgtca 29508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 16192728 - 16192842
Alignment:
Q  169 tgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
    |||||||||||||||||||||| ||||   ||| ||| ||||| ||||||| |||| |||||||| |||||||| |||||||| |||||| | ||| | |    
T  16192728 tgtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtcggcatctgag 16192827  T
Q  269 tcatgtccggtgtcc 283  Q
    ||||||||| |||||    
T  16192828 tcatgtccgatgtcc 16192842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 282
Target Start/End: Complemental strand, 25065031 - 25064877
Alignment:
Q  126 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtg 225  Q
    ||||||||||||| |||||| |  |||||||||||||| |||| |||||||||| |||||| ||| || ||  ||| ||  ||||| ||| ||| |||||    
T  25065031 agcacgaacactcctcggataaaccgtgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacacat--aattacactaaattatgtg 25064934  T
Q  226 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    ||||| || ||| |||||||||||||  |||||| | || ||||| |||||||||||    
T  25064933 attttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtc 25064877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 14832205 - 14832081
Alignment:
Q  144 attagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattag 243  Q
    ||||| ||||||||||||||||||| |||||||||| || ||||||| ||||||||||  |  ||||| | ||| | |||||||||| || |||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattag 14832106  T
Q  244 cggtgtcgatgtgtcagtatccgtg 268  Q
    | || |||  ||||| |||||||||    
T  14832105 ctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 20503582 - 20503514
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||||||||| |||||||||||||| |||||||||||||||  |||||||||    
T  20503582 atgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgaca 20503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 55401192 - 55401124
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||||||||| |||||| |||||||||||| |||||||||| ||||||||||    
T  55401192 atgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 55401124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 2620003 - 2620139
Alignment:
Q  139 ttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatt 238  Q
    |||||||||| ||||||||| || |||||||||||||||||| |||||| || |||||  ||| ||  | ||| ||| ||| ||||||||||||| |||     
T  2620003 ttcggattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacacat--agttacacttaattatgtgattttctcaaatg 2620100  T
Q  239 attagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||| |||||||  |||||||| |||| ||| ||||||    
T  2620101 attagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 3164047 - 3164134
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||| |||||||||| || |||||||||| ||||||| ||| || | |||||||| |||||||||||||||| |||||| |||||    
T  3164047 actgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgct 3164134  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 249
Target Start/End: Original strand, 17005550 - 17005677
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||||||| ||||||| |||||||||| |||||| |||||| |||| ||||  ||||||||||| |||  |||| ||||  || ||||| ||||||| |    
T  17005550 atgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaatta 17005649  T
Q  222 tgtgattttctcgaattattagcggtgt 249  Q
    | ||||||| || ||||||||| |||||    
T  17005650 tatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 34185054 - 34185183
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||  |||| |||| ||||  |||| ||||| ||||  |  ||||| |||||||      
T  34185054 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattg 34185153  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||| |  |||||||||| ||||||    
T  34185154 tgtgattttttgaaattattagccgtgtcg 34185183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Original strand, 4990983 - 4991063
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||| |||| |||||||| || ||||||||||||||  |||||||| |||||||| ||| ||||||||||||    
T  4990983 aattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgtgt 4991063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 8383300 - 8383220
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||| || |||||||||| |||||||||||||||||  |||||| | |||||||| ||||| ||||||||||    
T  8383300 aattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgt 8383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 286
Target Start/End: Complemental strand, 28918120 - 28917965
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||| | |||||| | ||||||| |||||||| |||||||||| ||||||||||         || ||||| ||||  |  ||||| ||||||| |    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc---------cacgacaccgacacttgtaattacactgaatta 28918030  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtg 286  Q
    ||||||||| || ||||||||||  |||||  |||||||| |||||||| |||||||||||||||    
T  28918029 tgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 27505368 - 27505305
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    |||||||||| |||||| ||||||||| | ||||||||||||||||| |||||||||| |||||    
T  27505368 atgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 124 - 282
Target Start/End: Complemental strand, 11666070 - 11665912
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 223  Q
    |||||||| |||||| | | ||||| ||||| ||| | || |||| ||||||||||| ||| | ||| ||||| |||| ||| ||||| ||| |||  ||    
T  11666070 gaagcacggacactccttgaattaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtg 11665971  T
Q  224 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    ||||||| || ||||||||||| ||||| ||||| ||| |  ||||| |||||||||||    
T  11665970 tgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtc 11665912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 26290470 - 26290360
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    |||||| ||||||||||||||| ||| || |||||||  | |||||||||| ||| ||||| || |||  ||||||||||||| ||||||||  ||||||    
T  26290470 gtgtcctggtgtcggacatgtgccgtttccgacaccggaacgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtc 26290371  T
Q  251 gatgtgtcagt 261  Q
    |  ||||||||    
T  26290370 ggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 28812632 - 28812522
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttct 232  Q
    |||||| ||||||||| ||||||| | |||||||||||| |||||||||||||| ||| ||||| ||||  |  || || ||||||| |||||||||  |    
T  28812632 acactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttctt 28812533  T
Q  233 cgaattattag 243  Q
    | |||||||||    
T  28812532 caaattattag 28812522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 40052429 - 40052383
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  40052429 atgaagcacgaacactcctcggattaggcgtgtcccggtgtcggaca 40052383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 24205057 - 24205150
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| |||| || |||| |||||||| |||||||| | ||||||  |||||||| |||||||| |||||||||||||||| ||| || |||||    
T  24205057 aattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgct 24205150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 270
Target Start/End: Complemental strand, 37077487 - 37077338
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc-gtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    |||||||||| ||| || | |||||||  ||||||| |||||||||||| ||| ||||  ||||||||||||||| ||||| |||  |||  | |||||     
T  37077487 atgaagcacggacattccttggattaggtgtgtccccgtgtcggacatgcgtccgtgtacgacaccgacatgacaatgacacatatgattccattgaatt 37077388  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    |||| || ||||| |||||||| ||||||||  |||||| | ||||||||    
T  37077387 atgttatattctcaaattattatcggtgtcggcgtgtcactgtccgtgtc 37077338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 49651718 - 49651846
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||  |||||||||  |||||||||||||||| |||||||||||| |   |||||| ||||| ||||  |  ||||| | ||||| |    
T  49651718 atgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaatta 49651816  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||| || |||||||||| ||||||    
T  49651817 tgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 4466622 - 4466694
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||| || |||||||||  |||||||| ||||||||  |||||||| | |||||||||||||||||||||    
T  4466622 actgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtgtcatgtccggtgtccgt 4466694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 283
Target Start/End: Complemental strand, 14829816 - 14829657
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggac-atgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 222  Q
    |||||||| ||| || || |||||| ||||||||||||||| || |  | |||||||  ||||||||| ||||| ||||  |  |||||   ||||| ||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  223 gtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    |||||||| || |||||||||| ||||||  |||||||| || ||||||||||||||||||    
T  14829716 gtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtcc 14829657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 168
Target Start/End: Complemental strand, 25775626 - 25775578
Alignment:
Q  120 caatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  25775626 caatgaagcacgaacactcctcggattaggcgtgtcctggtgtcggaca 25775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 8789490 - 8789560
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtg--tcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||||||||| |||||| ||||||| ||||||||  ||||||| ||||||||||    
T  8789490 atgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgaca 8789560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 11313737 - 11313860
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac-----cgacatgacactgacatataaaattatactgaatcatgtgat 227  Q
    |||||||| |||||||  ||||||| |||||  ||| ||| ||||||||||||     ||||| |||||| ||| ||| ||||| ||| ||| |||||||    
T  11313737 acactcttaggattaggagtgtcccagtgtcaaacacgtgacgtgtctgacactaacacgacacgacactaacacatataattacactaaattatgtgat 11313836  T
Q  228 tttctcgaattattagcggtgtcg 251  Q
    |||||| |||||||||| ||||||    
T  11313837 tttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 13620786 - 13620837
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatc 264  Q
    ||||||||||||||||||||| ||||| ||||||||||||  ||||||||||    
T  13620786 actgaatcatgtgattttctcaaattactagcggtgtcgacatgtcagtatc 13620837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 294
Target Start/End: Complemental strand, 25093617 - 25093458
Alignment:
Q  124 gaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatg 223  Q
    |||||||||||||||||| ||||||| |||   | ||||||||||||||| ||||| |||||||||         ||||||  ||||| |||||||  ||    
T  25093617 gaagcacgaacactcttcagattagaagtgcttcagtgtcggacatgtgttgtgtccgacaccgac---------acatat--aattacactgaattgtg 25093529  T
Q  224 tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatc 294  Q
    |||||||||| ||| |||| | ||||||  |||| ||| || ||||| ||||||||||| |||| ||||||    
T  25093528 tgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgtgtttgtatc 25093458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 1438847 - 1438793
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||||||||||| ||||||||||||| |||| |||||| ||||| |||||||||    
T  1438847 aattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagt 1438793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 3631796 - 3631738
Alignment:
Q  127 gcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    ||||| |||||| ||||| ||| ||||||| |||||||||||||||||||||| |||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtccgacac 3631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 285
Target Start/End: Original strand, 8587037 - 8587115
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||| ||| ||| |||||||||| || ||||| |||  ||||||  |||||||| |||||||||||||||||||||||    
T  8587037 aattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgt 8587115  T

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Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 8842451 - 8842377
Alignment:
Q  117 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    |||| |||||||||| |||||| ||||||||| |||||| |  | ||  ||||||||||||||||||||||||||    
T  8842451 tatctatgaagcacggacactcctcggattaggcgtgtctcaatatctaacatgtgtcgtgtctgacaccgacat 8842377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 26492147 - 26492213
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccga 188  Q
    ||||||| || ||| || ||||||||||||||||  |||||| ||||||||||||||| ||||||||    
T  26492147 atgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccga 26492213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 287
Target Start/End: Original strand, 34307765 - 34307876
Alignment:
Q  170 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgt 269  Q
    |||||||||| |||||||||| ||||||      || ||||| ||||||  ||||||||||||| ||||||||||||||||   ||||  || || ||||    
T  34307765 gtgtcgtgtccgacaccgacacgacact------tataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgt 34307858  T
Q  270 catgtccggtgtccgtgt 287  Q
    |||||||||||| |||||    
T  34307859 catgtccggtgttcgtgt 34307876  T

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Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 34910434 - 34910393
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtc 163  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  34910434 atgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 5440969 - 5441033
Alignment:
Q  122 atgaagcacgaacactcttcggattagac-gtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    |||||||||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||    
T  5440969 atgaagcacggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgacac 5441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 11252093 - 11252025
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||  |||||| ||||||||| ||||| ||| || |||||| |||| ||||||||||||||||    
T  11252093 atgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgaca 11252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 15999952 - 16000008
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||| ||||| |||||| | ||||||| ||||||||||||||||||| |||||||||    
T  15999952 atgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgt 16000008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 282
Target Start/End: Complemental strand, 16789139 - 16788980
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||  |||||  |||||||| ||| ||||||||||| |||| ||||| |||| |||||  |||  || ||||| ||||||| |    
T  16789139 atgaagcacggacactcctcaaattaggtgtgtcccg-tgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaatta 16789041  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    | ||||||| |  |||||||| |  | ||| ||| |||||||||||||||| || ||||||    
T  16789040 tatgatttttttaaattattaactatatcggtgtatcagtatccgtgtcatatctggtgtc 16788980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 39002100 - 39001996
Alignment:
Q  182 acaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgt 281  Q
    ||||| ||| |||||||||||||| ||||| | ||||| |||||||||| || ||||  || |  ||||| ||||||||| | |||||| ||| ||||||    
T  39002100 acaccaacacgacactgacatatataattacattgaattatgtgattttttcaaattcctatccatgtcggtgtgtcagtgtacgtgtcgtgttcggtgt 39002001  T
Q  282 ccgtg 286  Q
    |||||    
T  39002000 ccgtg 39001996  T

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Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 1550220 - 1550141
Alignment:
Q  170 gtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    ||||||||||  |||| |||| ||||||||||  || ||||| |||||||  ||||||||| || |||||||||||||||    
T  1550220 gtgtcgtgtcgaacactgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgt 1550141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 7614416 - 7614475
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| |||||||| ||||||||||||| ||||||||||||  |||||||| | ||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg 7614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 7928508 - 7928449
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||| |||| ||| ||||| ||||||| |||||||||| || |||||||||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 10335316 - 10335395
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||| ||| || |||||||||  ||||||  |||||||| |||||||| ||||||||||||||||  ||||| |||||    
T  10335316 atgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgct 10335395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 270
Target Start/End: Original strand, 11493377 - 11493440
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||| ||||||| |||||||||||||  |||||||| |||||||| |||||| | ||||||||    
T  11493377 aattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtc 11493440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 168
Target Start/End: Complemental strand, 21720878 - 21720843
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggaca 168  Q
    |||||| |||||||||||||||||||||||||||||    
T  21720878 acactcatcggattagacgtgtcccggtgtcggaca 21720843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 285
Target Start/End: Original strand, 32429375 - 32429474
Alignment:
Q  186 cgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||||||| || || || ||||  ||||||| ||||||||||||  ||||||||||| |||||  |||||| | | |||||  ||||||||||||||    
T  32429375 cgacatgacaccgatatttataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgt 32429474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 190
Target Start/End: Complemental strand, 45451641 - 45451602
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  45451641 gtgtctcggtgtcggacatgtgtcgtgtccgacaccgaca 45451602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 49505155 - 49505210
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggt 247  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||| |||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 261
Target Start/End: Complemental strand, 15544736 - 15544682
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||||||| |||| |||||||||| || |||||||||||||||| | ||||||||    
T  15544736 aattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagt 15544682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 25074912 - 25074866
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||| |||||||||  ||||||| ||||||||||    
T  25074912 atgaagcacgaacactcctcggattaggtgtgtcccagtgtcggaca 25074866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 5407271 - 5407324
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
    ||||| ||||||||||||| |||| ||||||||||||  ||||| |||||||||    
T  5407271 tgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtg 5407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 7171607 - 7171554
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||| | ||||||| |||||| |||||||||||| |||||||||| ||||||    
T  7171607 acactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 18427066 - 18426997
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    ||||| |||| |||||| || ||||||  ||||||||||| |||||| ||||||| || |||||||||||    
T  18427066 atgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacat 18426997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 24204980 - 24205029
Alignment:
Q  119 tcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||| |||||| ||| ||||| ||||||| |||||||||||    
T  24204980 tcaatgaagcacggacactcctcgaattaggcgtgtcctggtgtcggaca 24205029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 28678378 - 28678309
Alignment:
Q  175 gtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagc 244  Q
    |||||||||||| ||| ||||| |||| ||| ||||||||| ||| |||||||||| |  ||||||||||    
T  28678378 gtgtctgacaccaacacgacaccgacacatacaattatactaaattatgtgattttattaaattattagc 28678309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 8101894 - 8101946
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtc 174  Q
    ||||||||||||||||| || |||||||||||| || ||||| |||| |||||    
T  8101894 atgaagcacgaacactcctcagattagacgtgtaccagtgtccgacacgtgtc 8101946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 10690269 - 10690321
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    |||| ||| ||||| ||||||| |||||||||||||  |||||||||||||||    
T  10690269 gacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 191
Target Start/End: Original strand, 14338454 - 14338494
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtcgtgtctgacaccgacat 191  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacat 14338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 300
Target Start/End: Original strand, 34784908 - 34785091
Alignment:
Q  117 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactg 216  Q
    |||| |||||||||  |||||| ||| || || |||||||| ||||| |||| |||||||||| || ||||||| ||||| |||| ||| ||||| |||     
T  34784908 tatctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacacta 34785007  T
Q  217 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||| ||||||||||||  ||  |||||  |||||| ||||||||| |||||||| |||| || ||||||||  |||||||||||    
T  34785008 aattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgct 34785091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 2438660 - 2438729
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  2438660 aatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 2438729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 27286223 - 27286352
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||  ||||||||  |||||||  |||||||||||||||||||||||||||| |||| |||||||||| |||||  || ||||| ||| ||| |    
T  27286223 atgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatta 27286322  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    |||||| || || ||||||||||| |||||    
T  27286323 tgtgatcttatcaaattattagcgttgtcg 27286352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 18840955 - 18841023
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  18840955 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 18841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 44860448 - 44860320
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||| |||||  |||||||| |||||||||  |||||||||  ||||| ||| ||||| |||| ||| ||||| ||||||| |    
T  44860448 atgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatta 44860349  T
Q  222 tgtgattttctcgaattattagcggtgtc 250  Q
    || ||||||||| ||||||||||||||||    
T  44860348 tgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 268
Target Start/End: Original strand, 22084758 - 22084909
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtg---tcggacatgtgtcgtgtctgacaccgacatgacactg--acatataaaattatactg 216  Q
    |||||||||  |||||| ||||||||| ||||||||||||   || |||| |||| ||||| ||||| |||| || || |  ||||||||||||| ||||    
T  22084758 atgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacactg 22084857  T
Q  217 aatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtg 268  Q
    ||| || |||||||||| |||||||| |||||| |||||||| |||||||||    
T  22084858 aattatatgattttctcaaattattaacggtgttgatgtgtccgtatccgtg 22084909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 23718078 - 23717999
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    |||| ||| ||||| ||||||| |||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  23718078 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 23717999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 24105750 - 24105671
Alignment:
Q  198 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    |||| ||| ||||| ||||||| |||||| |||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  24105750 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 24105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 26769639 - 26769560
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 201  Q
    |||||||||| |||||| ||||||||| |||||||| |||||||||| |||||||||| || ||||||||||||| ||||    
T  26769639 atgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgaca 26769560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 275
Target Start/End: Original strand, 11223795 - 11223947
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||| |||||||||||||| |||| |||||||||| |||||| ||||||||| ||||  |  ||||| ||||||| |    
T  11223795 atgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaatta 11223893  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtc 275  Q
    ||| ||||| || || ||||||| |||||   ||||| || ||| |||||||||    
T  11223894 tgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtcatgtc 11223947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 287
Target Start/End: Complemental strand, 17776714 - 17776551
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcat 222  Q
    ||||||||| |||||| ||||||||| | |||||||  ||||||||   ||||||||  |||||||| ||||||||||| ||| ||||| ||||| | ||    
T  17776714 tgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgtcgtgtccaacaccgacttgacactgacacatataattacactgacttat 17776615  T
Q  223 gtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc--atgtccggtgtccgtgt 287  Q
    ||| ||||||  ||||||||  ||| ||| |||||||||   ||||||  |||||||||||||||||    
T  17776614 gtggttttcttaaattattattggtatcggtgtgtcagt---cgtgtctgatgtccggtgtccgtgt 17776551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 266
Target Start/End: Complemental strand, 37419871 - 37419727
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||||| |  ||||||| |||||||||| ||||| | ||  |  ||||| |||||||      
T  37419871 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattt 37419772  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccg 266  Q
    ||||||||| || ||||||| ||  |||||  |||||||| ||||    
T  37419771 tgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 282
Target Start/End: Original strand, 21782746 - 21782909
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca----tataaaattatactga 217  Q
    |||||||||| ||||||  | |||||||||||||||||||| ||||| |||||||| |||||||| |||  |||| ||||     | | ||||| |||||    
T  21782746 atgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacaccaacacaacac-gacaccggcacataattacactga 21782844  T
Q  218 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    || ||||||||||||| |||||||||| ||||||  |||||||| |  ||||| ||||| |||||    
T  21782845 attatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtc 21782909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 24975257 - 24975385
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||| || |||||||  |||||| ||||||||||  ||| ||||||||||| |||| ||||| |||  ||| | ||| ||||||| |    
T  24975257 atgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaatta 24975355  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    |  ||||||||| |||||||||||||||||    
T  24975356 tacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 4207984 - 4207857
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    ||||| || ||||||||||||||||| ||||||  |||||||| ||| |||||||||| |||||||||| || || |||| ||| ||||| ||| ||| |    
T  4207984 atgaaacatgaacactcttcggattaaacgtgtttcggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca-atataattacactaaatta 4207886  T
Q  222 tgtgattttctcgaattattagcggtgtc 250  Q
    || | |||| || ||||||||| ||||||    
T  4207885 tgcgcttttttcaaattattagtggtgtc 4207857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 15972990 - 15972922
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| ||| ||||||||||||  ||||||||| |||||||| |||||||||| ||||||||||    
T  15972990 atgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgaca 15972922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 31284077 - 31283998
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||||||||||| |||||||||| ||||||  |||| ||| | ||||| |||||||||||||||||  |||||||||||    
T  31284077 atgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgct 31283998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 33519805 - 33519751
Alignment:
Q  231 ctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    |||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||    
T  33519805 ctcggattattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgt 33519751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 36096306 - 36096416
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| |||||||| || | || |||||||| ||||| |||| |||||||||| |||| ||||| ||||| |||| ||| ||||| |||| ||      
T  36096306 atgaagcacggacactctttggttaaggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattt 36096405  T
Q  222 tgtgattttct 232  Q
    |||||||||||    
T  36096406 tgtgattttct 36096416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 287
Target Start/End: Original strand, 36756274 - 36756440
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatc 220  Q
    ||||||||||  |||||| | ||||||| |||||  ||||||||||||||||| ||||  |||||  ||| ||||| ||||  || ||||| |||||||     
T  36756274 aatgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatt 36756373  T
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||| ||||  || |||||||||  ||||||| |||||||| || ||||| | |||| ||| |||||    
T  36756374 atgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttcgtgt 36756440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 18276564 - 18276471
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||   | ||||| || || || |||||||||||||||| |||||| |||||    
T  18276564 aattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgct 18276471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Complemental strand, 21616805 - 21616712
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||  ||||| || |||||||| ||||  ||||| ||||  ||||| |||||    
T  21616805 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgct 21616712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 28412393 - 28412313
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||| |||||||||| || |||||||| |||||| || |||| ||| |||||||| |||| |||||||||||    
T  28412393 aattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgt 28412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 31808134 - 31808066
Alignment:
Q  193 acactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    ||||||||| ||| ||||| ||||||| |||||||||| |  ||||||||||||||||| |||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagt 31808066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 38117101 - 38117165
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||||||| |||| | ||||||||| ||||||||||||||||||| |||| ||||| ||||||    
T  38117101 atgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacc 38117165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 15907853 - 15907912
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctg 181  Q
    |||||||||| |||||| || |||| | ||||||||||||||||| ||||||||||||||    
T  15907853 atgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtctg 15907912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 300
Target Start/End: Complemental strand, 28678003 - 28677858
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    |||||||| ||||||||||  |||||||| |||||||||||     |  ||||||||  ||| ||||||| |||||||||| || |||||||||||||||    
T  28678003 cgtgtccctgtgtcggacacttgtcgtgtttgacaccgacac----cgaacatataa--ttacactgaattatgtgattttttcaaattattagcggtgt 28677910  T
Q  250 cgatgtgtcagtatccgtgtca-tgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||  ||  |||| || |||||| |||||| ||| |||||| |||||||||||    
T  28677909 cggcgttccagtgtcagtgtcagtgtccgttgtacgtgtacgtatctgtgct 28677858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 15909572 - 15909618
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||    
T  15909572 atgaagcacgaacactcttcgaattaggcgtgtccctgtgtcggaca 15909618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 30404866 - 30404936
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    ||||| ||||||| |||||||||| || |||||||| | ||||||  |||||||| |||||||||||||||    
T  30404866 aattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 35449626 - 35449561
Alignment:
Q  122 atgaagcacgaacactcttcggattaga--cgtgtcccggtgtcggacatgtgtcgtgtctgacac 185  Q
    |||||||||  |||||| ||||||||||  ||||| | ||||||||||||||||||||||||||||    
T  35449626 atgaagcacagacactcctcggattagagacgtgttctggtgtcggacatgtgtcgtgtctgacac 35449561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 251
Target Start/End: Original strand, 18889550 - 18889651
Alignment:
Q  151 gtgtcccggtgtcggacatgtgtcg-tgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgt 249  Q
    |||||| ||||||||||||| |||| |||| |||||  ||| ||||| |||| |||  |||| ||||||| ||||||||||||| | |||||||||| ||    
T  18889550 gtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattacactgaattatgtgattttctcaatttattagcggcgt 18889649  T
Q  250 cg 251  Q
    ||    
T  18889650 cg 18889651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 190
Target Start/End: Complemental strand, 19942383 - 19942314
Alignment:
Q  121 aatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||| | |||||| ||||||||| |||||||||||||| ||||  || |||||| ||||||||||    
T  19942383 aatgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 269
Target Start/End: Original strand, 4882670 - 4882774
Alignment:
Q  165 gacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatc 264  Q
    ||||||| |||||||||||||||||| ||||  ||||  |  ||||| ||||||| || | ||||| || ||| ||||||||| |||| |||||||||||    
T  4882670 gacatgtatcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagtatc 4882769  T
Q  265 cgtgt 269  Q
     ||||    
T  4882770 tgtgt 4882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 5367289 - 5367241
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||    
T  5367289 ggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgaca 5367241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 18054852 - 18054912
Alignment:
Q  239 attagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgc 299  Q
    |||||| ||||||| ||||| || ||| |||| |||||||||||||||| |||||||||||    
T  18054852 attagctgtgtcgacgtgtcggtgtccctgtcgtgtccggtgtccgtgtctgtatctgtgc 18054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 27084375 - 27084315
Alignment:
Q  133 acactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatga 193  Q
    |||||| || |||||| |||||| |||||| ||||| |||||||||| |||||||||||||    
T  27084375 acactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatga 27084315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 31018633 - 31018557
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtcc 283  Q
    ||||| ||| ||||||||||||||||  ||||||||||||||| |  |||||||| ||| |||| | ||||||||||    
T  31018633 aattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 37559094 - 37559026
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| ||||||||  ||||| ||||||||||||| |||||  ||| ||||||||||    
T  37559094 atgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgaca 37559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 21091839 - 21091772
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||| |||||||||||| |||  ||||||||||||| |||| ||| | |||||||||| ||||    
T  21091839 tgaagcacggacactcttcggaataggtgtgtcccggtgtccgacaggtggcttgtctgacactgaca 21091772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 39323307 - 39323244
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtc 270  Q
    ||||| ||||||| |||| ||||| || |||||||||||||||||| || ||||| ||||||||    
T  39323307 aattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 10535687 - 10535733
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggaca 168  Q
    ||||||||||||||||| ||||||||| ||||||| |||||| ||||    
T  10535687 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcagaca 10535733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 277
Target Start/End: Complemental strand, 18589254 - 18589171
Alignment:
Q  192 gacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccg 277  Q
    |||||||||| ||| | ||| |||||||  ||| |||||||  |||||||||| ||||||  |||| |||||||||||||||||||    
T  18589254 gacactgacacatatagttagactgaattgtgtaattttct--aattattagcagtgtcggcgtgttagtatccgtgtcatgtccg 18589171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 19959943 - 19959881
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgaca 184  Q
    |||||||||  | |||||| |||||||||| ||| ||||||||||||  ||||||||||||||    
T  19959943 atgaagcaccgatactctttggattagacgcgtctcggtgtcggacacttgtcgtgtctgaca 19959881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 275
Target Start/End: Original strand, 36409612 - 36409711
Alignment:
Q  174 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 273  Q
    |||||| |||||| ||||||||| |||| ||||  ||| ||| ||| |||||||||| || |||||| ||||||||||   ||| |||||||||||| ||    
T  36409612 cgtgtcagacaccaacatgacaccgacacataa--ttacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtg 36409709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 37411266 - 37411304
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  37411266 actgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 242
Target Start/End: Complemental strand, 2331900 - 2331802
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 241  Q
    ||||||| ||||||| |||||| |||| |||  ||| | ||||| |||| ||||| |||| |||||  || ||||||| ||||||||||||| |||||||    
T  2331900 ggattaggcgtgtcctggtgtcagacacgtgctgtgcccgacactgacacgacaccgacacataaa--tacactgaattatgtgattttctcaaattatt 2331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 25846784 - 25846743
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtg 248  Q
    ||||| ||||||||||||||||||||| ||||||||| ||||    
T  25846784 aattacactgaatcatgtgattttctcaaattattagtggtg 25846743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 29970566 - 29970619
Alignment:
Q  208 attatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagt 261  Q
    |||| ||||||  ||| ||||||||| |||||||||||||||| ||||||||||    
T  29970566 attacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagt 29970619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 37497238 - 37497169
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcg-tgtctgacaccgaca 190  Q
    |||||||||| |||||  | ||||||| | |||||||||| || |||||||||| |||||||||||||||    
T  37497238 atgaagcacggacacttctgggattagccatgtcccggtgccgaacatgtgtcggtgtctgacaccgaca 37497169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 1328021 - 1327977
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcg 251  Q
    |||||||||||||  | |||||||||| |||||||||||||||||    
T  1328021 aattatactgaattttatgattttctcaaattattagcggtgtcg 1327977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 287
Target Start/End: Original strand, 18420458 - 18420530
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||||||||| |||||||||| |||| |  ||||||||||  || || ||| ||||||||||||    
T  18420458 tgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcggtgtccgtgt 18420530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 20242669 - 20242737
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||  ||||||||||||| || |||||||  ||||| |||| |||| ||||| ||||||||||    
T  20242669 atgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgaca 20242737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 21091782 - 21091706
Alignment:
Q  191 tgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    |||||||||||  |  ||||| ||||||  |||| |||||||  ||||||||||||||||| ||||||||| |||||    
T  21091782 tgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 30404792 - 30404860
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    ||||||||| ||| ||  || |||||| | ||||| |||||||||||||||||||||| ||| ||||||    
T  30404792 atgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccgaca 30404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 34993924 - 34993980
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    ||||||||||||||||| | | ||||| |||||||| ||||||||||  ||||||||    
T  34993924 atgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgt 34993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 53288 - 53147
Alignment:
Q  142 ggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattatt 241  Q
    |||||| |||||||||||||||||||| ||||| |||| |||||||||| | ||| ||||  || ||||| ||||||| ||||||||||||| |||||||    
T  53288 ggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T
Q  242 agcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
     ||||| |||  |||||||    |||||| |||||||||| |||||    
T  53188 ggcggtatcggcgtgtcag----cgtgtcgtgtccggtgttcgtgt 53147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 3780 - 3909
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||| | |||||| ||||||||| |||||| || |||||||||||||||||||| |||||| ||| ||||||||||  |  ||||| ||||||| |    
T  3780 atgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaatta 3879  T
Q  222 tgtgattttctcgaattattagcggtgtcg 251  Q
    ||||||||| |  |||||||| | ||||||    
T  3880 tgtgatttttttaaattattaaccgtgtcg 3909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 267
Target Start/End: Complemental strand, 92939 - 92790
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctga----caccgacatgacactgacatataaaattatactga 217  Q
    |||||||||| |||||| ||||||||| ||||||| |||||| ||||||||||||||| ||    |||| |||  | |||||||  |  ||||| |||||    
T  92939 atgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacccaccaacacaaaactgacacttgtaattacactga 92840  T
Q  218 atcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgt 267  Q
    || |||| |||||||| |||||||||||||||||  |||||||| |||||    
T  92839 attatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 201
Target Start/End: Complemental strand, 71853 - 71774
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgaca 201  Q
    |||||||||  |||||| ||||||||| ||||||||||||||||||| |||| ||||| |||||||||| ||||||||||    
T  71853 atgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgaca 71774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 298
Target Start/End: Complemental strand, 21119 - 20995
Alignment:
Q  174 cgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatg 273  Q
    ||||||||||||||||| || || |||| ||| |||||||| || | ||||||||||||| |||||||| | |||||    ||||||| |||||||| ||    
T  21119 cgtgtctgacaccgacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtg 21020  T
Q  274 tccggtgtccgtgtatgtatctgtg 298  Q
    || |||||||||||  |||||||||    
T  21019 tctggtgtccgtgttcgtatctgtg 20995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 70394 - 70327
Alignment:
Q  123 tgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||||||||| ||||||||| | ||||| ||||||||||| |||||||||| ||||||||||    
T  70394 tgaagcacgaacactcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgaca 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 285
Target Start/End: Complemental strand, 20239 - 20137
Alignment:
Q  183 caccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    |||||||| ||||||||||  |  ||||| ||||||| |||||||||| || |||||||||| ||||||  |||||| | |||||||| |||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 20140  T
Q  283 cgt 285  Q
    |||    
T  20139 cgt 20137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 44486 - 44584
Alignment:
Q  152 tgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtc 250  Q
    |||||| |||||||||| |||| |||||  ||||||||| || || |||| ||| ||||| ||||||| ||||||||||||| |||| |||||||||||    
T  44486 tgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 126 - 199
Target Start/End: Complemental strand, 3052 - 2979
Alignment:
Q  126 agcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactga 199  Q
    |||||| |||||| ||||||||| ||||| ||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  3052 agcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactga 2979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 4823 - 4879
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgt 178  Q
    |||||||||| |||||| ||||||||| |||||||| ||||||||||||||||||||    
T  4823 atgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 404 - 472
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||| | |||||||| ||||||||||    
T  404 atgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 478 - 571
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    ||||| |||||||  ||||||||| || |||||||||| ||||||  || ||||| |||||| | ||| ||||||||||||  ||||| |||||    
T  478 aattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgct 571  T

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Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 13437 - 13365
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||| ||||||||||||| |||||||||  ||||||  |||||||| |||||||||| ||||||||||||    
T  13437 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgt 13365  T

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Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Original strand, 21890 - 21962
Alignment:
Q  213 actgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgt 285  Q
    ||||||| ||||||||||||| |||||||||  ||||||  |||||||| |||||||||| ||||||||||||    
T  21890 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgt 21962  T

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Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 8739 - 8629
Alignment:
Q  177 gtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtcc 276  Q
    ||||||||  |||| ||||| ||||  || ||||||||||||  |||||||||||   |||||||||  ||||||| |||||||| ||| |||| |||||    
T  8739 gtctgacatagacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtcc 8640  T
Q  277 ggtgtccgtgt 287  Q
    |||||||||||    
T  8639 ggtgtccgtgt 8629  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 287
Target Start/End: Complemental strand, 8915 - 8761
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 221  Q
    |||||||||| | |||| || |||||| |||||| |||||||||||| |||||||||| ||||||||||         | | |||  ||| ||| ||| |    
T  8915 atgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca---------cttgtaa--ttacactaaataa 8827  T
Q  222 tgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    | ||||||| || |||||||||| ||||||  |||||||| |||||||| ||||||||||||||||    
T  8826 tatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgt 8761  T

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Target: scaffold1528 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 298
Target Start/End: Complemental strand, 1120 - 987
Alignment:
Q  165 gacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatc 264  Q
    ||||| ||| |||||  |||||||||  ||||||||| ||| | ||| ||||||| |||| ||||| || ||||||||||||||||| ||||||||  ||    
T  1120 gacatttgttgtgtccaacaccgacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtc 1021  T
Q  265 cgtgtcatgtccggtgtccgtgtatgtatctgtg 298  Q
     ||||| | | |||||| | ||| ||||||||||    
T  1020 tgtgtcgtatacggtgttcatgtttgtatctgtg 987  T

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Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 84921 - 85033
Alignment:
Q  139 ttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaatt 238  Q
    |||||||||| ||||||| | ||||||||| |||| ||||  |||| ||||||||||| |||||||| ||||| ||  ||| || |||||||||  ||||    
T  84921 ttcggattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgattttcttaaatt 85020  T
Q  239 attagcggtgtcg 251  Q
    | ||| |||||||    
T  85021 agtagtggtgtcg 85033  T

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Target: scaffold0475 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 300
Target Start/End: Complemental strand, 3340 - 3266
Alignment:
Q  226 attttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 300  Q
    |||||||  |||| |||||  |||||| ||||||||||||||||| |||||||||||||||| | |||| |||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgtgtctatatccgtgct 3266  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 225298 - 225364
Alignment:
Q  221 atgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    |||| |||||||| |||||||| | ||||||  |||||||| |||||||| ||||||||||||||||    
T  225298 atgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgt 225364  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 282
Target Start/End: Original strand, 178813 - 178910
Alignment:
Q  186 cgacatgacactgacatataaaattatactgaatcatg-tgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtc 282  Q
    ||||||||||||||||  |  ||||| ||||||| ||| ||||||| || |||||||||  ||||||  |||||||| |||||||| |||||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 178910  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Complemental strand, 14644 - 14580
Alignment:
Q  122 atgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacacc 186  Q
    |||||||||| |||||| |  |||||| |||||| |||||||||||| |||||||||| ||||||    
T  14644 atgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 68210 - 68314
Alignment:
Q  159 gtgtcggacatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtc 258  Q
    |||||| |||| ||| ||||  |||||||| | ||||||||||  || ||||||||| ||| || |||||||||| |||||||| |||||   |||||||    
T  68210 gtgtcgaacatatgttgtgttcgacaccgatacgacactgacacctataattatactaaattatatgattttctcaaattattaacggtgctaatgtgtc 68309  T
Q  259 agtat 263  Q
    |||||    
T  68310 agtat 68314  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 135308 - 135378
Alignment:
Q  187 gacatgacactgacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgt 257  Q
    |||| ||||| |||| ||| ||||| || |||| ||||||||||||| |||||||||| |||||| |||||    
T  135308 gacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgt 135378  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 17539 - 17612
Alignment:
Q  117 tatcaatgaagcacgaacactcttcggattagacgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||| |||||||||| | ||||  | |||||| |||||||||||||||||||| | | |||||| |||||||||    
T  17539 tatctatgaagcacggaaactcagctgattaggcgtgtcccggtgtcggacatatattgtgtctaacaccgaca 17612  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 1733 - 1693
Alignment:
Q  150 cgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 190  Q
    |||||||  ||||||||||||||||||||| ||||||||||    
T  1733 cgtgtcctagtgtcggacatgtgtcgtgtccgacaccgaca 1693  T

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Target: scaffold0085 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 26428 - 26384
Alignment:
Q  215 tgaatcatgtgattttctcgaattattagcggtgtcgatgtgtca 259  Q
    ||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  26428 tgaattatgtgattttctcaaattattagtggtgtcgacgtgtca 26384  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 287
Target Start/End: Complemental strand, 130525 - 130445
Alignment:
Q  207 aattatactgaatcatgtgattttctcgaattattagcggtgtcgatgtgtcagtatccgtgtcatgtccggtgtccgtgt 287  Q
    ||||| ||||||| |||||||||| || || ||||| | ||||||   ||||| | |||||||| ||||||||||||||||    
T  130525 aattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgt 130445  T

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