View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11827_high_35 (Length: 307)
Name: NF11827_high_35
Description: NF11827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11827_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 7 - 291
Target Start/End: Original strand, 43452364 - 43452648
Alignment:
| Q |
7 |
gaagcagagatgagataattgcatcttcggttgtcaagactttgttctctgaaaaagcacttggagctattgttggcagtttaggagctgaatgggcaga |
106 |
Q |
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| T |
43452364 |
gaagcagtgatgagataattgcatcttcgattgtcaagactttgttctctgaaaaagcacttggagctattgttggcagtttaggagctgaatgggcaga |
43452463 |
T |
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| Q |
107 |
ggagaggattgttgcagtggagatcttattaagatgcatgcaagaggatgggacttgtaggaacaccattgctgacaaagcagagctctcttctattatg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43452464 |
ggagaggattgttgcagtggagatcttattaagatgcatgcaagaggatgggacttgtaggaacaccattgctgacaaagcagagctctcttctattatg |
43452563 |
T |
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| Q |
207 |
gagagcttcatccatgcaaatgatgcagaacgtttcaagattgttgaannnnnnnctgagttgatcaaactaaataggtatatct |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
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| T |
43452564 |
gagagcttcatccatgcaaatgatgcagaacgtttcaagattgttgaatttttttctgagttgatcaagctaaataggtatatct |
43452648 |
T |
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