View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11827_low_56 (Length: 220)
Name: NF11827_low_56
Description: NF11827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11827_low_56 |
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Alignment Details
Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 40563658 - 40563571
Alignment:
| Q |
3 |
cattgattcaatccattaatttatcaattatcaattacttattggtataagtttcctct--aataaatcaactctctcctccacttgc |
88 |
Q |
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| T |
40563658 |
cattgattcaatccattaatttatcaattatcaattacttattggtataagtttcctctaaaataaatcaactctctcctccacttgc |
40563571 |
T |
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