View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11831_low_13 (Length: 355)

Name: NF11831_low_13
Description: NF11831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11831_low_13
NF11831_low_13
[»] chr1 (42 HSPs)
chr1 (1-339)||(2489847-2490193)
chr1 (28-136)||(27507521-27507629)
chr1 (29-136)||(35980417-35980524)
chr1 (29-146)||(21685562-21685679)
chr1 (29-152)||(6694382-6694504)
chr1 (29-136)||(12973505-12973612)
chr1 (29-147)||(3935402-3935520)
chr1 (29-146)||(52380742-52380859)
chr1 (29-132)||(36203477-36203580)
chr1 (28-146)||(32910389-32910507)
chr1 (30-172)||(34914080-34914222)
chr1 (29-135)||(40095452-40095558)
chr1 (30-172)||(52828769-52828910)
chr1 (29-146)||(8165571-8165688)
chr1 (45-146)||(26345078-26345179)
chr1 (45-145)||(17989009-17989108)
chr1 (50-150)||(27350625-27350725)
chr1 (56-152)||(6248049-6248150)
chr1 (45-129)||(8268618-8268703)
chr1 (47-136)||(35980298-35980387)
chr1 (32-136)||(21905175-21905279)
chr1 (29-136)||(17651697-17651804)
chr1 (29-134)||(25560031-25560133)
chr1 (28-130)||(1161778-1161880)
chr1 (50-136)||(50471193-50471279)
chr1 (29-130)||(16529536-16529637)
chr1 (45-146)||(47984520-47984621)
chr1 (47-135)||(18309963-18310051)
chr1 (31-146)||(9962167-9962282)
chr1 (51-146)||(50153376-50153471)
chr1 (46-152)||(16537851-16537957)
chr1 (45-146)||(16062824-16062925)
chr1 (45-130)||(39256672-39256757)
chr1 (29-130)||(51252451-51252552)
chr1 (28-135)||(50310550-50310657)
chr1 (44-146)||(35375136-35375238)
chr1 (85-153)||(27770205-27770272)
chr1 (34-130)||(29388983-29389079)
chr1 (56-132)||(3860285-3860362)
chr1 (29-134)||(15882189-15882294)
chr1 (45-130)||(32954000-32954084)
chr1 (29-146)||(33769823-33769940)
[»] chr3 (36 HSPs)
chr3 (31-150)||(55467658-55467777)
chr3 (30-146)||(54121967-54122083)
chr3 (46-134)||(26758186-26758274)
chr3 (45-150)||(45629154-45629259)
chr3 (45-132)||(17144764-17144850)
chr3 (32-136)||(20846418-20846524)
chr3 (48-146)||(22257519-22257617)
chr3 (29-146)||(2566350-2566467)
chr3 (32-136)||(2832424-2832533)
chr3 (46-164)||(46253434-46253552)
chr3 (29-146)||(10481665-10481782)
chr3 (29-130)||(6004423-6004524)
chr3 (37-146)||(27054028-27054137)
chr3 (45-146)||(42363245-42363346)
chr3 (45-133)||(38652022-38652109)
chr3 (56-134)||(22473123-22473201)
chr3 (53-130)||(45915239-45915316)
chr3 (32-151)||(44650912-44651031)
chr3 (29-130)||(21586879-21586980)
chr3 (66-147)||(25919272-25919353)
chr3 (29-146)||(26291976-26292093)
chr3 (29-130)||(43030362-43030463)
chr3 (45-146)||(45699572-45699679)
chr3 (31-130)||(32880248-32880347)
chr3 (29-119)||(20038330-20038420)
chr3 (29-91)||(37044866-37044928)
chr3 (65-151)||(40483904-40483990)
chr3 (45-131)||(51191666-51191752)
chr3 (29-130)||(34794540-34794641)
chr3 (46-146)||(38680769-38680868)
chr3 (66-146)||(48167243-48167322)
chr3 (45-152)||(52631999-52632107)
chr3 (31-130)||(4669683-4669782)
chr3 (29-130)||(9827814-9827915)
chr3 (79-136)||(50579032-50579089)
chr3 (29-130)||(51149693-51149794)
[»] chr7 (50 HSPs)
chr7 (20-136)||(8568584-8568700)
chr7 (32-146)||(23032622-23032736)
chr7 (29-146)||(32942099-32942216)
chr7 (29-146)||(10338831-10338947)
chr7 (64-172)||(20334564-20334672)
chr7 (25-133)||(31287812-31287920)
chr7 (29-136)||(524896-525003)
chr7 (45-172)||(8118274-8118401)
chr7 (29-172)||(29628053-29628196)
chr7 (45-150)||(11834515-11834620)
chr7 (29-130)||(13852254-13852355)
chr7 (30-151)||(16535758-16535879)
chr7 (30-151)||(16629783-16629904)
chr7 (45-146)||(23729349-23729450)
chr7 (49-146)||(48642745-48642842)
chr7 (45-136)||(26215154-26215245)
chr7 (28-147)||(40848795-40848914)
chr7 (29-146)||(4153747-4153864)
chr7 (29-130)||(27054768-27054869)
chr7 (29-172)||(43908621-43908763)
chr7 (49-146)||(35820107-35820204)
chr7 (30-146)||(49011196-49011311)
chr7 (45-136)||(34750949-34751040)
chr7 (45-91)||(11399079-11399125)
chr7 (36-130)||(47903200-47903294)
chr7 (44-136)||(26524971-26525063)
chr7 (49-137)||(27456325-27456413)
chr7 (29-135)||(27215222-27215333)
chr7 (32-114)||(5932644-5932726)
chr7 (29-115)||(18673241-18673327)
chr7 (45-130)||(7209305-7209390)
chr7 (52-152)||(7685932-7686035)
chr7 (25-130)||(31876666-31876770)
chr7 (36-136)||(30079622-30079717)
chr7 (31-79)||(31013137-31013185)
chr7 (66-146)||(46147198-46147278)
chr7 (47-130)||(31983032-31983115)
chr7 (46-136)||(7697247-7697336)
chr7 (29-91)||(29211723-29211785)
chr7 (29-91)||(45898135-45898197)
chr7 (107-144)||(2308137-2308174)
chr7 (29-130)||(3213258-3213359)
chr7 (29-130)||(8768999-8769100)
chr7 (29-130)||(10671766-10671867)
chr7 (29-130)||(12117545-12117646)
chr7 (97-146)||(22701340-22701389)
chr7 (29-130)||(47069614-47069715)
chr7 (29-130)||(47204493-47204594)
chr7 (28-76)||(1335263-1335311)
chr7 (26-130)||(10069136-10069240)
[»] chr8 (30 HSPs)
chr8 (45-150)||(11218911-11219016)
chr8 (47-136)||(24682120-24682209)
chr8 (29-145)||(22811194-22811310)
chr8 (29-146)||(33565900-33566019)
chr8 (40-146)||(7428453-7428559)
chr8 (28-130)||(44672733-44672835)
chr8 (29-146)||(4785181-4785298)
chr8 (31-146)||(44336719-44336835)
chr8 (29-116)||(12883780-12883867)
chr8 (29-146)||(9012857-9012969)
chr8 (29-130)||(10661099-10661200)
chr8 (45-130)||(33068227-33068312)
chr8 (26-130)||(14549166-14549270)
chr8 (29-143)||(40436381-40436496)
chr8 (110-172)||(12193452-12193514)
chr8 (110-172)||(12437880-12437942)
chr8 (49-146)||(36340780-36340877)
chr8 (29-130)||(36910367-36910468)
chr8 (29-153)||(28073204-28073328)
chr8 (44-131)||(45366268-45366355)
chr8 (29-114)||(30392084-30392169)
chr8 (46-114)||(31497661-31497729)
chr8 (45-91)||(28441448-28441494)
chr8 (34-82)||(11017015-11017063)
chr8 (29-116)||(8035988-8036075)
chr8 (29-91)||(19539328-19539390)
chr8 (73-146)||(13325289-13325361)
chr8 (45-114)||(15272358-15272427)
chr8 (45-114)||(15452727-15452796)
chr8 (30-130)||(3006608-3006708)
[»] chr2 (28 HSPs)
chr2 (29-146)||(41461027-41461144)
chr2 (29-152)||(12041603-12041726)
chr2 (29-150)||(17762687-17762808)
chr2 (29-146)||(27301504-27301621)
chr2 (29-146)||(5862651-5862768)
chr2 (29-130)||(44979805-44979906)
chr2 (45-172)||(44085450-44085578)
chr2 (49-150)||(13193864-13193965)
chr2 (45-136)||(28790467-28790558)
chr2 (29-156)||(10242758-10242885)
chr2 (29-153)||(1330955-1331079)
chr2 (32-152)||(12884479-12884594)
chr2 (45-130)||(44035267-44035353)
chr2 (29-130)||(42785665-42785766)
chr2 (46-146)||(30759668-30759768)
chr2 (29-136)||(15320609-15320716)
chr2 (28-130)||(25298287-25298389)
chr2 (29-130)||(19937161-19937261)
chr2 (69-142)||(21480836-21480909)
chr2 (45-82)||(36500713-36500750)
chr2 (28-91)||(43452099-43452162)
chr2 (29-91)||(34910256-34910318)
chr2 (49-130)||(11375867-11375948)
chr2 (29-114)||(12841491-12841576)
chr2 (45-130)||(16578597-16578682)
chr2 (55-132)||(36075371-36075448)
chr2 (29-130)||(36413676-36413777)
chr2 (50-146)||(30761776-30761872)
[»] chr6 (35 HSPs)
chr6 (29-152)||(9686003-9686126)
chr6 (45-171)||(24644948-24645073)
chr6 (29-142)||(22413783-22413896)
chr6 (30-146)||(19135132-19135249)
chr6 (27-136)||(31945459-31945563)
chr6 (32-136)||(29048075-29048179)
chr6 (30-133)||(892374-892477)
chr6 (23-136)||(11416994-11417108)
chr6 (29-90)||(8135381-8135442)
chr6 (45-146)||(28632897-28632997)
chr6 (29-130)||(35040246-35040347)
chr6 (41-152)||(9909025-9909136)
chr6 (29-115)||(10391073-10391159)
chr6 (29-130)||(10494417-10494518)
chr6 (45-130)||(10590812-10590897)
chr6 (45-146)||(14940592-14940693)
chr6 (31-131)||(6266851-6266951)
chr6 (28-146)||(12108584-12108703)
chr6 (66-129)||(30752513-30752576)
chr6 (29-136)||(8064440-8064548)
chr6 (45-119)||(26645431-26645505)
chr6 (45-119)||(26751397-26751471)
chr6 (29-129)||(15859671-15859771)
chr6 (29-91)||(20500510-20500572)
chr6 (46-136)||(32190700-32190790)
chr6 (29-98)||(13091950-13092019)
chr6 (29-130)||(13810905-13811006)
chr6 (30-130)||(5287940-5288040)
chr6 (23-130)||(5874188-5874295)
chr6 (29-87)||(13532360-13532419)
chr6 (56-146)||(4562829-4562919)
chr6 (117-151)||(4577128-4577162)
chr6 (46-132)||(25006365-25006451)
chr6 (89-146)||(7170117-7170174)
chr6 (45-81)||(8135448-8135484)
[»] chr4 (47 HSPs)
chr4 (29-172)||(48293399-48293542)
chr4 (29-146)||(20986367-20986484)
chr4 (31-132)||(23450018-23450119)
chr4 (45-132)||(4642383-4642470)
chr4 (20-130)||(40806854-40806964)
chr4 (31-147)||(45464137-45464253)
chr4 (32-146)||(36106439-36106554)
chr4 (29-136)||(48338287-48338393)
chr4 (29-146)||(5122404-5122521)
chr4 (29-130)||(23120293-23120394)
chr4 (44-141)||(23625926-23626023)
chr4 (34-136)||(2939878-2939980)
chr4 (32-146)||(21068994-21069108)
chr4 (49-146)||(19753541-19753638)
chr4 (49-146)||(19786168-19786265)
chr4 (29-130)||(32136638-32136739)
chr4 (29-133)||(45983329-45983433)
chr4 (29-119)||(31301241-31301331)
chr4 (65-150)||(1566111-1566196)
chr4 (29-130)||(40900119-40900220)
chr4 (56-146)||(8484638-8484728)
chr4 (45-130)||(5262000-5262085)
chr4 (29-146)||(32223339-32223456)
chr4 (45-133)||(15723843-15723931)
chr4 (40-172)||(29232709-29232841)
chr4 (29-101)||(51394664-51394736)
chr4 (31-146)||(28147727-28147842)
chr4 (28-131)||(41325040-41325143)
chr4 (31-146)||(42198737-42198846)
chr4 (31-130)||(43630525-43630624)
chr4 (29-111)||(10218624-10218706)
chr4 (28-130)||(18536680-18536782)
chr4 (29-114)||(6333262-6333347)
chr4 (30-91)||(29335189-29335250)
chr4 (30-95)||(41260219-41260284)
chr4 (44-136)||(18396289-18396381)
chr4 (29-101)||(27743165-27743237)
chr4 (70-137)||(46471426-46471493)
chr4 (39-81)||(7785081-7785123)
chr4 (57-135)||(52096064-52096142)
chr4 (36-145)||(11031661-11031765)
chr4 (29-130)||(29636719-29636820)
chr4 (29-130)||(36077518-36077619)
chr4 (45-123)||(48255679-48255759)
chr4 (60-152)||(49640823-49640916)
chr4 (29-130)||(50570994-50571095)
chr4 (103-151)||(12916372-12916420)
[»] chr5 (39 HSPs)
chr5 (29-146)||(27572065-27572182)
chr5 (30-165)||(40884277-40884412)
chr5 (29-172)||(36567667-36567810)
chr5 (24-142)||(22747597-22747714)
chr5 (31-137)||(40692443-40692548)
chr5 (29-130)||(17085273-17085374)
chr5 (45-101)||(10090267-10090323)
chr5 (45-136)||(25495046-25495137)
chr5 (23-146)||(35240844-35240967)
chr5 (30-130)||(333313-333413)
chr5 (44-172)||(2588935-2589063)
chr5 (29-101)||(12379078-12379151)
chr5 (45-150)||(20191995-20192100)
chr5 (49-150)||(32244392-32244493)
chr5 (107-172)||(36760137-36760202)
chr5 (29-130)||(38433643-38433744)
chr5 (32-128)||(6718533-6718629)
chr5 (33-132)||(32721709-32721807)
chr5 (45-136)||(34087381-34087472)
chr5 (56-146)||(41454831-41454926)
chr5 (29-130)||(15068406-15068507)
chr5 (49-146)||(17132110-17132207)
chr5 (32-128)||(42544607-42544703)
chr5 (29-130)||(8408936-8409037)
chr5 (29-130)||(30265827-30265928)
chr5 (37-142)||(34881348-34881453)
chr5 (30-130)||(2226920-2227020)
chr5 (28-91)||(23780769-23780832)
chr5 (28-91)||(23867722-23867785)
chr5 (29-136)||(28224894-28225001)
chr5 (45-114)||(691601-691671)
chr5 (29-91)||(18432024-18432086)
chr5 (107-149)||(40331507-40331549)
chr5 (65-134)||(4413857-4413926)
chr5 (29-130)||(11917351-11917452)
chr5 (29-130)||(27886452-27886553)
chr5 (65-130)||(36177141-36177206)
chr5 (47-115)||(1681086-1681154)
chr5 (106-150)||(34969347-34969391)
[»] scaffold0204 (2 HSPs)
scaffold0204 (29-136)||(25809-25915)
scaffold0204 (31-129)||(14470-14568)
[»] scaffold0688 (2 HSPs)
scaffold0688 (45-91)||(1120-1166)
scaffold0688 (45-91)||(7689-7735)
[»] scaffold0015 (1 HSPs)
scaffold0015 (49-146)||(62365-62462)
[»] scaffold0013 (2 HSPs)
scaffold0013 (29-130)||(128582-128683)
scaffold0013 (29-131)||(105975-106077)
[»] scaffold0664 (1 HSPs)
scaffold0664 (45-146)||(5957-6058)
[»] scaffold0059 (1 HSPs)
scaffold0059 (29-130)||(69576-69677)


Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 2490193 - 2489847
Alignment:
Q  1 aaatttccttgtaagtaattgtacgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgc 100  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  2490193 aaatttccttgtaagtaattgtacttaagggtgtttgcggtgcagtttggttcgattttgaggctaaaagttatccgaaccgcaagataaataagtatgc 2490094  T
Q  101 gatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaatgtaatttgaattggatcggttttgaacacatttaattatacctataatt 200  Q
    ||||| |||||||||  |||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||||||||||||||||||| ||||||||| |    
T  2490093 gatttggtttggttcagttgacttttaaaataaaattcgaaccaaaccaatgtagtttgaattggatcagttttgaacacatttaattgtacctataact 2489994  T
Q  201 ta--------tgaggtttctgaatgtgattccacaaatgctttcccaacatagccataatgacaagtctagcttttctgataccaatgtcgcctatttga 292  Q
    ||        | ||| ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2489993 tatcaggaattcaggattctgaatgagattccagacatgctttcccaacatagccataatgacaagtctagcttttctgataccaatgtcgcctctttga 2489894  T
Q  293 ggtgatttggtattagtgttgcaattcacccaatgtacaatatttcc 339  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2489893 ggtgatttggtattagtgttgcaattcacccaatgtacaatatttcc 2489847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 27507629 - 27507521
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    |||||||| ||||||  ||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||    
T  27507629 agggtgttcgcggtgcggtttggttcggttttgagaataaaagtcatccgaaccgcaagataaataagtatgcaatttggtttagttcggttgactttta 27507530  T
Q  128 aaataaaat 136  Q
    |||||||||    
T  27507529 aaataaaat 27507521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 35980524 - 35980417
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| | ||| |||| |||||||||||||||||    
T  35980524 gggtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgttcgattgacttttaa 35980425  T
Q  129 aataaaat 136  Q
    ||||||||    
T  35980424 aataaaat 35980417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 21685679 - 21685562
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||| | | | ||||| ||| |||||||||  |||||||||||    
T  21685679 gggtgtttgcggtgcagtttggttcggttttaaggctaaaagtcatctgaaccgcaagatacaaatgcatgcggtttggtttggttcagttgacttttaa 21685580  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||  ||||||||    
T  21685579 aataaaatcagaaccaaa 21685562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 6694504 - 6694382
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||| |||||| |||| ||||||||||||| |||||  |||||||||||||||| |||||||||||| | |||  |||| || | |||||||||||    
T  6694504 gggtgttt-cggtgtggtttagttcggttttgagactaaacatcatccgaaccgcaagttaaataagtatgtggtttgttttgtttaggttgacttttaa 6694406  T
Q  129 aataaaatttgaaccaaatcaatg 152  Q
    |||||||||||||||||| |||||    
T  6694405 aataaaatttgaaccaaaccaatg 6694382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 12973505 - 12973612
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| ||| |||||||| | |||| ||| ||    
T  12973505 gggtgttcgcggtgcggtttggttcggttttgaagctgaaagtcatccgaaccgcaagataaataaatatgcggtttggtttggtttggttgattttgaa 12973604  T
Q  129 aataaaat 136  Q
    ||||||||    
T  12973605 aataaaat 12973612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 29 - 147
Target Start/End: Original strand, 3935402 - 3935520
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  |||||||||| ||||||| |||||||||||  |||||| |||||||||||||||||  | | ||||| |||| |||||||||||    
T  3935402 gggtgtttgcggtgcggtttggttcgattttgagactaaaagtcatatgaaccgtaagataaataagtatgcagtatggtttgattcggttgacttttaa 3935501  T
Q  129 aataaaatttgaaccaaat 147  Q
    ||||||||  |||||||||    
T  3935502 aataaaatccgaaccaaat 3935520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 52380859 - 52380742
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||| ||| ||||||| |||| |||||||||||||||||  |||| |||||||| |||| |||||| ||| |||| ||||| |||||||||||    
T  52380859 gggtgttcgcgatgtggtttggtacggtattgaggctaaaagtcatatgaactgcaagatatataactatgcggtttggtttagttcggttgacttttaa 52380760  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||| ||||||||||||    
T  52380759 aataagatttgaaccaaa 52380742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 36203580 - 36203477
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||   |||||||||||||||||| |||||||||||| |||||||||||||| ||| ||||| |||  ||||||||| |||||||||||    
T  36203580 gggtgttcgcggtgcgatttggttcggttttgaggttaaaagtcatccaaaccgcaagataaaaaagcatgcggtttgatttggttcggttgacttttaa 36203481  T
Q  129 aata 132  Q
    ||||    
T  36203480 aata 36203477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 32910507 - 32910389
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    ||||||||||||||||   ||||||||||||||||| |||||||||||| ||| |||||||||| ||  ||||  ||| |||||||||| |||||||| |    
T  32910507 agggtgtttgcggtgtgtgttggttcggttttgaggataaaagtcatccaaactgcaagataaaaaaacatgcagtttggtttggttcggttgactttaa 32910408  T
Q  128 aaataaaatttgaaccaaa 146  Q
    ||||| ||| |||||||||    
T  32910407 aaatagaatctgaaccaaa 32910389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 34914080 - 34914222
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| | |||| ||||||||||| ||||||||  ||||||||||| ||| || | ||||| ||||||||  ||| ||||| || | ||||||||||||    
T  34914080 ggtgttcgtggtgcagtttggttcgattttgaggtgaaaagtcatccaaactgcgaaataaaaaagtatgcagtttggtttgctttggttgacttttaaa 34914179  T
Q  130 ataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    |||||||| |||||||| ||||||  |||| ||||||||||||    
T  34914180 ataaaattcgaaccaaaccaatgtggtttggattggatcggtt 34914222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 40095558 - 40095452
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||| ||| | ||| |||| || | ||||||    
T  40095558 gggtgttcgcggtgcggtttggttcggttttgaggttaaaagttatccgaaccgcaagataaataaatatgcggtttggcttgtttcggtttatttttaa 40095459  T
Q  129 aataaaa 135  Q
    |||||||    
T  40095458 aataaaa 40095452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 52828769 - 52828910
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| ||||| | ||||||||||||||| ||| |||| |||||| ||||||||||||||  ||| ||||  ||| |||||| ||| ||||||||||||    
T  52828769 ggtgttcgcggtttggtttggttcggttttaaggttaaaggtcatctgaaccgcaagataacaaagcatgctgtttggtttgg-tcggttgacttttaaa 52828867  T
Q  130 ataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||| ||||||||| ||| |  |||||| |||||||||||    
T  52828868 ataaaatctgaaccaaaccaacgcgatttgagttggatcggtt 52828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 8165688 - 8165571
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  |||| |||| ||||||| | ||||| |||||||||||||| |||||| ||| ||||| ||| ||| |||||| |||||||| ||    
T  8165688 gggtgtttgcggtgcggtttagttcagttttgaaggtaaaaatcatccgaaccgcaggataaagaagcatgcggtttggttcggttcggttgactttaaa 8165589  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||||||| |||||||||    
T  8165588 aataaaatctgaaccaaa 8165571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 26345179 - 26345078
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||| |||| ||||||||| || ||||||||||||||  || ||||| ||||||||| ||||||||| |||| |||||||||||||||||||  ||||||    
T  26345179 gtttagttccgttttgaggttagaagtcatccgaaccaaaaaataaaaaagtatgcggtttagtttgattcggttgacttttaaaataaaatccgaacca 26345080  T
Q  145 aa 146  Q
    ||    
T  26345079 aa 26345078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 17989009 - 17989108
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| ||  || || |||  ||||||||| |||||||||||||||||||  ||||||    
T  17989009 gtttggttcggttttgaggctaaaagtcatctgaatcgcaagataaa-aaccatacggtttgatttggttcggttgacttttaaaataaaatccgaacca 17989107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 50 - 150
Target Start/End: Original strand, 27350625 - 27350725
Alignment:
Q  50 gttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatca 149  Q
    ||||| |||| || |||||| |||||||| | | || ||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||| ||||||    
T  27350625 gttcgattttaagactaaaaatcatccgatctgtaaaataaataagtatgcggtttggtttggttcaattgacttttaaaataaaattcgaacaaaatca 27350724  T
Q  150 a 150  Q
    |    
T  27350725 a 27350725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 6248049 - 6248150
Alignment:
Q  56 ttttgaggctaaaagtcatccgaaccgcaagataaataagtatgc-----gatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaa 150  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||||     | ||| |||||||| | |||||||||||||||||||||||| |||| |||    
T  6248049 ttttgagactaaaagtcatccaaaccgcaagaaaaataagtatgcggtttggtttggtttggtttggttgacttttaaaataaaatttgaatcaaaccaa 6248148  T
Q  151 tg 152  Q
    ||    
T  6248149 tg 6248150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 8268618 - 8268703
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa-taagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  || ||||||  || |||||||| | ||||||||||||    
T  8268618 gtttggttcggttttgaggctaaaagtcatctgaaccgcaagataaacaaaatatgcgggttggtttggtttggttgacttttaaa 8268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 35980387 - 35980298
Alignment:
Q  47 ttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||| ||||||| |||||||||||||||||||||||||| |||| ||| ||| | ||| |||| ||| | |||||||||||||||||||    
T  35980387 ttggtgcggtttttaggctaaaagtcatccgaaccgcaaggtaaaaaagcatgtggtttggttttgtttggttgacttttaaaataaaat 35980298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 21905175 - 21905279
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||| |||||||||||||||||| ||||||| ||||||||| || || | |||| ||||| ||| ||||||||| |||||||||| ||| |||| | |||    
T  21905175 tgttagcggtgtagtttggttcgtttttgagcctaaaagtcgtctgatctgcaacataaaaaagaatgcgatttggtttggttcggttggctttgataat 21905274  T
Q  132 aaaat 136  Q
    |||||    
T  21905275 aaaat 21905279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 17651697 - 17651804
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||| ||  ||||| |||||||||||||||||||||||| ||||  | ||| |||| ||| ||||| |||  ||| ||||| |||||||||||    
T  17651697 gggtgtttgcgatgcggtttgattcggttttgaggctaaaagtcattcgaattgtaaggtaaaaaagcatgcggtttgattttgttcggttgacttttaa 17651796  T
Q  129 aataaaat 136  Q
    ||||||||    
T  17651797 aataaaat 17651804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 25560133 - 25560031
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||   ||||||||| |||||||| |||||||||| ||||||| |||||||| ||||||||| ||| |   |||||| |||||||||||    
T  25560133 gggtgttcgcggtgcgttttggttcgattttgaggttaaaagtcattcgaaccgtaagataaaaaagtatgcggtttgg---ggttcggttgacttttaa 25560037  T
Q  129 aataaa 134  Q
    ||||||    
T  25560036 aataaa 25560031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 1161880 - 1161778
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    |||||||||||| ||  ||||||||||||||||||   |||||||||||||||||| ||||||| ||| ||| | ||| |||||||| | |||| |||||    
T  1161880 agggtgtttgcgatgcggtttggttcggttttgagcagaaaagtcatccgaaccgcgagataaaaaagcatgtggtttggtttggtttggttgattttta 1161781  T
Q  128 aaa 130  Q
    |||    
T  1161780 aaa 1161778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 50471193 - 50471279
Alignment:
Q  50 gttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||| |||||| |||||||||||||||||||| || ||||| ||||||||| ||| |||||||||  |||  ||||||||||||||    
T  50471193 gttcgattttgatgctaaaagtcatccgaaccgtaaaataaaaaagtatgcggtttggtttggttcagttgcattttaaaataaaat 50471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 16529637 - 16529536
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||  |||||||||||| ||| || ||||||| ||| ||||  ||| |||||||||| |||| ||||||    
T  16529637 gggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgccgtttggtttggttcggttgatttttaa 16529538  T
Q  129 aa 130  Q
    ||    
T  16529537 aa 16529536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 47984621 - 47984520
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||||||||||||||||| ||||||||||| | ||  |||||||||| ||  ||||  |||  ||||||| || |||||||||||||||||| |||||||    
T  47984621 gtttggttcggttttgagactaaaagtcattcaaattgcaagataaaaaaacatgcagtttgatttggtttgactgacttttaaaataaaatatgaacca 47984522  T
Q  145 aa 146  Q
    ||    
T  47984521 aa 47984520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 18309963 - 18310051
Alignment:
Q  47 ttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaa 135  Q
    ||||||| ||||| ||| |||||||||||||||||||| |||||| ||  ||| ||||| |||||||| | |||| |||||||||||||    
T  18309963 ttggttcagtttttaggataaaagtcatccgaaccgcatgataaaaaaacatgtgatttggtttggtttggttgaattttaaaataaaa 18310051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 9962282 - 9962167
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||| ||||||  ||||||||| |||||||  |||||||||||||||| ||||||||||| ||  | ||| ||| ||||| || | ||||||||| |||    
T  9962282 gtgttcgcggtgcggtttggttcagttttgaaactaaaagtcatccgaatcgcaagataaaaaaacaggcggttttgtttgatttggttgacttttcaaa 9962183  T
Q  131 taaaatttgaaccaaa 146  Q
    |||||||  |||||||    
T  9962182 taaaattcaaaccaaa 9962167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 50153376 - 50153471
Alignment:
Q  51 ttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||||||| ||||||| ||| |||| |||||||||| || |||| | |||  ||| ||||| |||||||||||||||||||  ||||||||    
T  50153376 ttcggttttgaggttaaaagttatctgaactgcaagataaaaaaatatgtggtttgattttgttcggttgacttttaaaataaaatccgaaccaaa 50153471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 152
Target Start/End: Complemental strand, 16537957 - 16537851
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaa 145  Q
    ||||||||| |||||| | |||||||||||  |||||||||||||| ||  ||||| |||  ||||||| | || ||||||||||||||||  |||||||    
T  16537957 tttggttcgattttgaaggtaaaagtcatctaaaccgcaagataaaaaaacatgcggtttgatttggtttggttcacttttaaaataaaatccgaaccaa 16537858  T
Q  146 atcaatg 152  Q
    | |||||    
T  16537857 accaatg 16537851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 16062824 - 16062925
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||||||||||||||||  ||||| ||||  |||||| ||||| |||||||||  | ||| ||||| |||  |||||||||||||||||||| ||| ||    
T  16062824 gtttggttcggttttgagaataaaattcatttgaaccgtaagattaataagtatctggtttggtttgattcagttgacttttaaaataaaattcgaatca 16062923  T
Q  145 aa 146  Q
    ||    
T  16062924 aa 16062925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 39256757 - 39256672
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||| ||||||||   ||||||||| ||||| || ||||||| ||| ||||| |||||||||||||| |||| ||||||||    
T  39256757 gtttggttctgttttgagcacaaaagtcattcgaactgcgagataaaaaagcatgcggtttagtttggttcggttgatttttaaaa 39256672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 51252552 - 51252451
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||| |||||||  |||||||||||| |||||| ||||||| ||| ||| | ||| |||||||| | |||| ||||||    
T  51252552 gggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttgggttgatttttaa 51252453  T
Q  129 aa 130  Q
    ||    
T  51252452 aa 51252451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 50310550 - 50310657
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    |||||||||||  |  ||||||||| |  ||||||  ||||||| ||||||| ||||||||||| ||  ||||  |||||||||||| |||||| |||||    
T  50310550 agggtgtttgctatcaagtttggtttgtatttgagagtaaaagttatccgaatcgcaagataaaaaaacatgcagtttagtttggtttgattgaatttta 50310649  T
Q  128 aaataaaa 135  Q
    ||||||||    
T  50310650 aaataaaa 50310657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 146
Target Start/End: Original strand, 35375136 - 35375238
Alignment:
Q  44 agtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacc 143  Q
    ||||||||||  ||||  || ||||||| || ||||||| ||||| || ||| ||||| | |||||||||| | |||||||||||||||||||  |||||    
T  35375136 agtttggttcaattttagggttaaaagttattcgaaccgtaagattaaaaagcatgcggtatagtttggtttgtttgacttttaaaataaaatccgaacc 35375235  T
Q  144 aaa 146  Q
    |||    
T  35375236 aaa 35375238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 153
Target Start/End: Complemental strand, 27770272 - 27770205
Alignment:
Q  85 agataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaatgt 153  Q
    ||||||| || |||||| ||| ||||||||||||| ||||||||||||||| | |||||||| ||||||    
T  27770272 agataaaaaaatatgcggttt-gtttggttcgattaacttttaaaataaaaatcgaaccaaaccaatgt 27770205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 29388983 - 29389079
Alignment:
Q  34 tttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||||  |||||||||| |||||||   ||||||||||| |||||  ||||||| ||| ||||| |||  ||||||| |||||| ||||||||    
T  29388983 tttgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgtgagataaaaaagcatgcggtttgatttggtttgattgatttttaaaa 29389079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 3860285 - 3860362
Alignment:
Q  56 ttttgaggctaaaagtcatccgaaccgcaagataaataag-tatgcgatttagtttggttcgattgacttttaaaata 132  Q
    |||||||| |||||||||||  ||| ||| |||||| ||  | || ||||||||||||||| ||||||||||||||||    
T  3860285 ttttgaggataaaagtcatcataacagcaggataaaaaacatgtgtgatttagtttggttcaattgacttttaaaata 3860362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 15882294 - 15882189
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||  |||||| ||||||||  || |||| | ||||||| || | ||| |||||||||| || ||||   |||||||||||| |||||| ||||||    
T  15882294 gggtgttaacggtgttgtttggtttagtgttgatgttaaaagtaattcaaactgcaagataaaaaaatatgtagtttagtttggtttgattgatttttaa 15882195  T
Q  129 aataaa 134  Q
    ||||||    
T  15882194 aataaa 15882189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 32954000 - 32954084
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||||||||||||   |||||||||||| ||||   ||||||| ||| ||||| ||| |||||||||| |||| ||||||||    
T  32954000 gtttggttcggttttgaacataaaagtcatccaaacc-tgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 32954084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 33769823 - 33769940
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||| ||   ||||||||| |||||   ||||||||||||||||||  | |||||| | ||||||| ||| ||||| |||| ||| |||| ||    
T  33769823 gggtgtttgcgttgcgatttggttcgattttggacctaaaagtcatccgaaccatatgataaaaatgtatgcggtttggtttgattcggttgcctttcaa 33769922  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||| |||  |||||||||    
T  33769923 aatgaaaactgaaccaaa 33769940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 55467777 - 55467658
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||||||||    
T  55467777 gtgtttgcggtgcggtttggttcggttttgaggctaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttgacttttaaaa 55467678  T
Q  131 taaaatttgaaccaaatcaa 150  Q
    ||||||  ||||||||||||    
T  55467677 taaaatccgaaccaaatcaa 55467658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 54121967 - 54122083
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    ||||||||||||| |||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||| ||| |||||||||| ||||||||||||    
T  54121967 ggtgtttgcggtgcagtttgattcgattttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcggtttggtttggttcggttgacttttaaa 54122066  T
Q  130 ataaaatttgaaccaaa 146  Q
    |||||||  ||||||||    
T  54122067 ataaaatccgaaccaaa 54122083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 26758186 - 26758274
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaa 134  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||||||||    
T  26758186 tttggttcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatacggtttggtttggttcggttgacttttaaaataaa 26758274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 45629154 - 45629259
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||| ||||| || | ||||||||||||||||| |  ||||||    
T  45629154 gtttgattcggttttaaggttaaaagtcatccgaaccgcaagataaataagtatgcaatttggtttgatttggttgacttttaaaataaactccgaacca 45629253  T
Q  145 aatcaa 150  Q
    ||||||    
T  45629254 aatcaa 45629259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 132
Target Start/End: Complemental strand, 17144850 - 17144764
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaata 132  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  || |||||||||| |||||||||||||||    
T  17144850 gtttggttcggttttgaggctaaaagtcatccaaaccgcaagataaa-aagtatgcggattggtttggttcggttgacttttaaaata 17144764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 20846418 - 20846524
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagt--atgcgatttagtttggttcgattgacttttaaa 129  Q
    |||| |||||| ||||||||||||||| |||  ||||||||||||||||||||||||||| || |  ||||| ||| |||||||||| ||||||||||||    
T  20846418 tgttcgcggtgcagtttggttcggtttcgagagtaaaagtcatccgaaccgcaagataaaaaaatacatgcgctttggtttggttcggttgacttttaaa 20846517  T
Q  130 ataaaat 136  Q
    |||||||    
T  20846518 ataaaat 20846524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 22257617 - 22257519
Alignment:
Q  48 tggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||  ||| ||||  |||||||||||||||| ||  ||||||||    
T  22257617 tggttcggttttgagactaaaagtcatccgaaccgcgagataaataagtatgcggtttgatttagttcagttgacttttaaaataatatccgaaccaaa 22257519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 2566467 - 2566350
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||| ||||   ||||||||| |||||| ||||||||||||| ||||| ||||||||| || |||| | ||| ||| ||||||||| | ||||||    
T  2566467 gggtgtttgtggtgcgctttggttcgattttgatgctaaaagtcatctgaaccacaagataaagaaatatgtggtttggttcggttcgattaagttttaa 2566368  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||||||||||||    
T  2566367 aataaaatttgaaccaaa 2566350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 136
Target Start/End: Complemental strand, 2832533 - 2832424
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgc-----gatttagtttggttcgattgactttt 126  Q
    |||| ||||||| |||||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||     | ||| |||||||||| |||||||||    
T  2832533 tgttcgcggtgtggtttggtttggttttgaggctaaaagtcatccgaaccacaagataaaaaagcatgcggtttggtttggtttggttcggttgactttt 2832434  T
Q  127 aaaataaaat 136  Q
    ||||||||||    
T  2832433 aaaataaaat 2832424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 46 - 164
Target Start/End: Complemental strand, 46253552 - 46253434
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaa 145  Q
    ||||||| |||||||||  |||||| |||| ||||||||| |||||||||||| |||||| |||||||||| ||| ||||||||||||| |   ||||||    
T  46253552 tttggtttggttttgagaataaaagacatctgaaccgcaaaataaataagtattcgattttgtttggttcggttggcttttaaaataaattccaaaccaa 46253453  T
Q  146 atcaatgtaatttgaattg 164  Q
    | ||||||  |||||||||    
T  46253452 accaatgtggtttgaattg 46253434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 10481782 - 10481665
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||  ||||| |||||||||||||||||||| ||||||||||  ||||| ||||||||| |   | ||  ||| |||||||||| |||||||||||    
T  10481782 gggtgttcacggtgcagtttggttcggttttgaggataaaagtcattggaaccacaagataaaaagacacgcagtttggtttggttcggttgacttttaa 10481683  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||||||| ||||    
T  10481682 aataaaatttgaatcaaa 10481665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 6004524 - 6004423
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||| ||  ||||||||||||||| ||  |||||||||||| |||||| ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  6004524 gggtgtttgcgatgcggtttggttcggttttcagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 6004425  T
Q  129 aa 130  Q
    ||    
T  6004424 aa 6004423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 146
Target Start/End: Original strand, 27054028 - 27054137
Alignment:
Q  37 gcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    |||||| |||||  ||||||||||||| ||||||| || ||||  |||||||||||||||||||  ||| |||||||| | |||| ||||||||||||||    
T  27054028 gcggtgcagtttatttcggttttgaggttaaaagttattcgaattgcaagataaataagtatgcattttggtttggtttggttgaattttaaaataaaat 27054127  T
Q  137 ttgaaccaaa 146  Q
    |  |||||||    
T  27054128 tcaaaccaaa 27054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 42363346 - 42363245
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||||| ||  ||||| ||| |||||||||| |||||||| |||| |||||  ||||||    
T  42363346 gtttggttcggttttgagggtaaaagtaatttgaaccgcaagataaaaaatcatgcggtttggtttggttcggttgactttaaaaacaaaatccgaacca 42363247  T
Q  145 aa 146  Q
    ||    
T  42363246 aa 42363245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 38652109 - 38652022
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataa 133  Q
    |||||||| |||||||| | ||||||||||||||| ||||||||||| || |||||| ||| |||||||||| |||||||| |||||||    
T  38652109 gtttggtttggttttgaaggtaaaagtcatccgaatcgcaagataaa-aaatatgcggtttggtttggttcggttgactttaaaaataa 38652022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 22473201 - 22473123
Alignment:
Q  56 ttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaa 134  Q
    ||||||| |||||| |||||| ||||||| |||||| || |||| ||||| ||||||||||||||||||||| ||||||    
T  22473201 ttttgagactaaaaatcatccaaaccgcatgataaaaaattatgtgatttggtttggttcgattgacttttagaataaa 22473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 45915316 - 45915239
Alignment:
Q  53 cggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||| |||| |||| ||||| | ||||||||||| |||||||||||| ||| |||||||||| |||||||||||||    
T  45915316 cggtttggaggttaaaggtcattcaaaccgcaagatgaataagtatgcggtttggtttggttcggttgacttttaaaa 45915239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 44650912 - 44651031
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||| ||||||| ||||| ||| ||||||||| |||||||||||||| ||| |  ||||| ||  ||||| ||| |||||||| | |||||||| |||||    
T  44650912 tgttcgcggtgtggtttgattcagttttgagggtaaaagtcatccgagccgtagaataaaaaaacatgcggtttggtttggtttggttgactttaaaaat 44651011  T
Q  132 aaaatttgaaccaaatcaat 151  Q
    |||||  |||||||| ||||    
T  44651012 aaaatccgaaccaaaccaat 44651031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 21586980 - 21586879
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||  ||||| |||||||||||||||||||  |||||||||||| |||||| ||||||| ||| ||||  ||| ||||| |||  |||| ||||||    
T  21586980 gggtgttcacggtgcagtttggttcggttttgagcttaaaagtcatccaaaccgcgagataaaaaagcatgcagtttggtttgattcagttgatttttaa 21586881  T
Q  129 aa 130  Q
    ||    
T  21586880 aa 21586879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 25919353 - 25919272
Alignment:
Q  66 aaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaat 147  Q
    |||| |||||||||| |||||||||| ||||||| | |||  ||||||||  |||| |||||||||||||| ||||||||||    
T  25919353 aaaattcatccgaactgcaagataaaaaagtatgagttttgatttggttctgttgagttttaaaataaaatatgaaccaaat 25919272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 26292093 - 26291976
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||| |||| |   ||||| |||||| |||||||||||||| || | |||| |||  ||||||||| |||| ||||||    
T  26292093 gggtgttcgcggtgcggtttggttcgattttaaaattaaaaatcatccaaaccgcaagataaaaaattgtgcggtttgctttggttcggttgatttttaa 26291994  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||| ||| |||||||||    
T  26291993 aatagaatctgaaccaaa 26291976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 43030362 - 43030463
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||| ||  ||||||||  |||||||||| |||| ||||||||||| ||||||||  ||| |||||||||| |||| ||||||    
T  43030362 gggtgttcgcggtgcggtttgatttagttttgagcataaaagtcatgcgaatcgcaagataaaaaagtatgcagtttggtttggttcggttgatttttaa 43030461  T
Q  129 aa 130  Q
    ||    
T  43030462 aa 43030463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 45699572 - 45699679
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataa------gtatgcgatttagtttggttcgattgacttttaaaataaaatt 137  Q
    ||||||||||||||||| ||||||| |||||||||||| ||||| ||| ||      || || ||||| |||| ||||||||||||||||||||||||||    
T  45699572 gtttggttcggttttgaagctaaaa-tcatccgaaccgtaagatcaaacaacatgcagtttgagatttggttttgttcgattgacttttaaaataaaatt 45699670  T
Q  138 tgaaccaaa 146  Q
    |||| ||||    
T  45699671 tgaatcaaa 45699679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 32880248 - 32880347
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||  ||||||||||| ||||||  |||||||| ||| |||||| ||||||| ||| ||| | |||  ||||||||| |||| ||||||||    
T  32880248 gtgtttgcggtgcggtttggttcggctttgagcataaaagtcctccaaaccgcgagataaaaaagcatgtggtttgatttggttcggttgatttttaaaa 32880347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 20038330 - 20038420
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt 119  Q
    |||||||| || || |||||||||| ||||| ||| ||||||||||| |||||| |||||||  ||| ||| | ||| |||||||||||||    
T  20038330 gggtgtttacgatgcagtttggttcagttttaaggttaaaagtcatctgaaccgtaagataaggaagcatgtggtttggtttggttcgatt 20038420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 37044866 - 37044928
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||| |||||  ||||||||||||||||||   ||||||||||| ||||||||||||||    
T  37044866 gggtgtttacggtgcggtttggttcggttttgagagaaaaagtcatccaaaccgcaagataaa 37044928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 40483904 - 40483990
Alignment:
Q  65 taaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaat 151  Q
    ||||| |||| |||||| ||||||||| | | ||||| ||| |||||||||  |||||||||||||||||| |  ||||||||||||    
T  40483904 taaaaatcattcgaaccacaagataaaaatgcatgcggtttggtttggttcagttgacttttaaaataaaaatcaaaccaaatcaat 40483990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 51191666 - 51191752
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||||||||  |||||||| ||||||| ||  ||||||||||||||| || |||||| ||| |||||||||| |||  |||||||||    
T  51191666 gtttggttctattttgaggttaaaagttattagaaccgcaagataaaaaaatatgcggtttggtttggttcggttggattttaaaat 51191752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 34794540 - 34794641
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||||||| |||||||||| |||| ||||||    
T  34794540 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgatttttaa 34794639  T
Q  129 aa 130  Q
    ||    
T  34794640 aa 34794641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 38680769 - 38680868
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaa 145  Q
    |||| |||||||||||  ||||||||||||| ||||| || ||||| ||  ||| | ||| ||| ||||   ||||||||||||||||||||||||||||    
T  38680769 tttgattcggttttgaaactaaaagtcatccaaaccgtaatataaaaaac-atgaggtttggttcggttaagttgacttttaaaataaaatttgaaccaa 38680867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 48167243 - 48167322
Alignment:
Q  66 aaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||| || || |||||||| |||||| ||| |||| ||||| |||| |||||||||||||||||||| ||| ||||    
T  48167243 aaaagtcattcggactgcaagatagataagtgtgcaatttggtttg-ttcggttgacttttaaaataaaattcgaatcaaa 48167322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 152
Target Start/End: Original strand, 52631999 - 52632107
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccg-caagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacc 143  Q
    |||||||||| |||| |||||||||||||||| ||| | ||||||||| ||  | ||| ||| ||||| |||| || |||||||||||| |||  |||||    
T  52631999 gtttggttcgtttttaaggctaaaagtcatccaaacagacaagataaaaaaacacgcggtttggtttgattcggttaacttttaaaatacaatccgaacc 52632098  T
Q  144 aaatcaatg 152  Q
    ||| |||||    
T  52632099 aaaccaatg 52632107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 4669782 - 4669683
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||||    
T  4669782 gtgtttgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 4669683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 9827915 - 9827814
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  | ||||||||||||| ||  |||||||||||| |||| | |||||| |||| |||||| ||  ||||||| | |||| ||||||    
T  9827915 gggtgttcgcggtgcggcttggttcggttttaagcataaaagtcatccaaaccacgagataattaagcatgcgacttgatttggttaggttgatttttaa 9827816  T
Q  129 aa 130  Q
    ||    
T  9827815 aa 9827814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 50579089 - 50579032
Alignment:
Q  79 accgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||||||| ||| | ||||||| ||||| |||| |||||||| ||||||||||    
T  50579089 accgcaagataaaaaagcacgcgatttggtttgcttcggttgactttaaaaataaaat 50579032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 51149794 - 51149693
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  51149794 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 51149695  T
Q  129 aa 130  Q
    ||    
T  51149694 aa 51149693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 8568700 - 8568584
Alignment:
Q  20 tgtacgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt 119  Q
    ||||| |||| ||||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| |||||| ||    
T  8568700 tgtacataagagtgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggttcggttcggtt 8568601  T
Q  120 gacttttaaaataaaat 136  Q
    |||||||||||||||||    
T  8568600 gacttttaaaataaaat 8568584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 23032622 - 23032736
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    ||||||| |||  ||||||||| || |||||||||||||||||| |||||| |||||||| ||||||| | |||||||||||||| ||||||||||||||    
T  23032622 tgtttgctgtgcggtttggttcagtgttgaggctaaaagtcatctgaaccgaaagataaaaaagtatgtggtttagtttggttcggttgacttttaaaat 23032721  T
Q  132 aaaatttgaaccaaa 146  Q
    |||||||||||||||    
T  23032722 aaaatttgaaccaaa 23032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 32942216 - 32942099
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||||||| |||||||||| ||  ||||| ||| ||||| |||| |||||||||||    
T  32942216 gggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaactgcaagataaaaaaacatgcggtttggtttgattcggttgacttttaa 32942117  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||| |||  ||||||||    
T  32942116 aatacaatccgaaccaaa 32942099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 10338947 - 10338831
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| |||||| ||||||||| |||||||||| |||| ||||||| ||| |||| ||||||||||||  | |||  |||||||||||||||||||||    
T  10338947 gggtgttcgcggtgcagtttggtttggttttgagggtaaa-gtcatccaaactgcaaaataaataagtatttggttttatttggttcgattgacttttaa 10338849  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||||||| |||||||||    
T  10338848 aataaaatctgaaccaaa 10338831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 20334564 - 20334672
Alignment:
Q  64 ctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaatgtaatttgaatt 163  Q
    ||||||||| ||||||||||||||||||||| |||||| ||| |||||||||| |||||||| |||||||||| ||||||||| || ||   |||| |||    
T  20334564 ctaaaagtcgtccgaaccgcaagataaataaatatgcggtttggtttggttcggttgactttaaaaataaaatctgaaccaaaccattgctgtttggatt 20334663  T
Q  164 ggatcggtt 172  Q
    |||||||||    
T  20334664 ggatcggtt 20334672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 31287920 - 31287812
Alignment:
Q  25 gtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactt 124  Q
    |||| |||||| | |||| || |||||| | |||||||||||| ||||||| |||||| |||||||||||||||||| ||| |||||||||| |||||||    
T  31287920 gtaacggtgttcgtggtgcagcttggtttgattttgaggctaatagtcatctgaaccgtaagataaataagtatgcggtttggtttggttcggttgactt 31287821  T
Q  125 ttaaaataa 133  Q
    |||||||||    
T  31287820 ttaaaataa 31287812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 525003 - 524896
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||  ||||| ||||||||||  |||| ||||||||||| ||| ||||||||||||||| || |||||| ||| ||||| ||||||||||||||||    
T  525003 gggtgttcacggtgcagtttggttcatttttaaggctaaaagttatctgaaccgcaagataaaaaaatatgcggtttggtttgattcgattgacttttaa 524904  T
Q  129 aataaaat 136  Q
    ||||||||    
T  524903 aataaaat 524896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 45 - 172
Target Start/End: Complemental strand, 8118401 - 8118274
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||||||| ||||||||| ||||| | ||||||||||||||||||| ||| ||| | ||| |||||||||| |||| ||| |||||||||| |||||||    
T  8118401 gtttggttctgttttgagggtaaaatttatccgaaccgcaagataaaaaagcatgtggtttggtttggttcggttgattttaaaaataaaatctgaacca 8118302  T
Q  145 aatcaatgtaatttgaattggatcggtt 172  Q
    || ||||||  ||||  |||||||||||    
T  8118301 aaccaatgttgtttgggttggatcggtt 8118274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 29628053 - 29628196
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||||||||||||  |||||  |||||||||||||| |||| ||  ||||| |||  |||||||||  ||| ||||||    
T  29628053 gggtgttcgcggtgcggtttggttcggttttgaggtgaaaaggtatccgaaccgcaaggtaaaaaaacatgcggtttgatttggttcggctgaattttaa 29628152  T
Q  129 aataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||||||||| |||| ||||||  ||||  |||||||||||    
T  29628153 aataaaatttgaatcaaaccaatgtggtttgggttggatcggtt 29628196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 11834620 - 11834515
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||||||||||| || | |||||||| ||||||||  ||||||||||||||||||| ||| ||||||||| ||||| |||||||||| | | |||| ||    
T  11834620 gtttggttcggttgtgtgcctaaaagttatccgaactacaagataaataagtatgcggtttggtttggttcaattgatttttaaaatacagtctgaatca 11834521  T
Q  145 aatcaa 150  Q
    ||||||    
T  11834520 aatcaa 11834515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 13852254 - 13852355
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||||| |||| ||||||||||||||||||  |||||||||||| ||| || ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  13852254 gggtgtttgcagtgtggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 13852353  T
Q  129 aa 130  Q
    ||    
T  13852354 aa 13852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 16535879 - 16535758
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| |||||| ||||| ||||| ||||||||||||||||||| | ||||||||| |||| ||  ||||| |||  || |||||| ||||||||||||    
T  16535879 ggtgttcgcggtgcagtttagttcgattttgaggctaaaagtcatgcaaaccgcaagttaaaaaaacatgcggtttcattaggttcggttgacttttaaa 16535780  T
Q  130 ataaaatttgaaccaaatcaat 151  Q
    |||||||  |||||||| ||||    
T  16535779 ataaaatccgaaccaaaccaat 16535758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 16629783 - 16629904
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| |||||| ||||| ||||| ||||||||||||||||||| | ||||||||| |||| ||  ||||| |||  || |||||| ||||||||||||    
T  16629783 ggtgttcgcggtgcagtttagttcgattttgaggctaaaagtcatgcaaaccgcaagttaaaaaaacatgcggtttcattaggttcggttgacttttaaa 16629882  T
Q  130 ataaaatttgaaccaaatcaat 151  Q
    |||||||  |||||||| ||||    
T  16629883 ataaaatccgaaccaaaccaat 16629904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 23729349 - 23729450
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||||||||  |||||| ||||||| ||||||||||||||||||||| ||| ||||| ||| ||||   ||| ||||||||||||||||||| |||||||    
T  23729349 gtttggttcaattttgatgctaaaaatcatccgaaccgcaagataaaaaagcatgcggtttggtttaactcggttgacttttaaaataaaatctgaacca 23729448  T
Q  145 aa 146  Q
    ||    
T  23729449 aa 23729450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 48642745 - 48642842
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||||||||| ||||| ||||| |||||||||||| || ||  ||||| ||| |||||||||| |||||||| ||||| ||||||||||||||    
T  48642745 ggttcggttttgagggtaaaattcatctgaaccgcaagattaaaaaacatgcggtttggtttggttcggttgactttaaaaattaaatttgaaccaaa 48642842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 26215245 - 26215154
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||  ||| || ||  || |||||||||| |||||||||||||||||||    
T  26215245 gtttggtttggttttgaggttaaaagtcatccaaaccgcaagataataaagcatacgggtttgtttggttcggttgacttttaaaataaaat 26215154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 40848795 - 40848914
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    |||||||| ||||||  ||||||||||||||||||| |||||||||| ||||  | ||| |||| ||  || || ||| |||||||||| ||||||||||    
T  40848795 agggtgttcgcggtgcggtttggttcggttttgagggtaaaagtcattcgaattgtaaggtaaaaaaacatacggtttggtttggttcggttgactttta 40848894  T
Q  128 aaataaaatttgaaccaaat 147  Q
    |||||||||  |||||||||    
T  40848895 aaataaaatccgaaccaaat 40848914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 4153864 - 4153747
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||| |||||  ||||| ||| |||||||||||||||||||| |||||  |  |||||| ||| ||||| | | |||||||||| |||||||| ||    
T  4153864 gggtgtttacggtgcggtttgattcagttttgaggctaaaagtcattcgaacaacgggataaaaaagcatgcggtatggtttggttcggttgactttaaa 4153765  T
Q  129 aataaaatttgaaccaaa 146  Q
     |||||||||||||||||    
T  4153764 tataaaatttgaaccaaa 4153747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 27054869 - 27054768
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  |||||||| |||||||||   ||||||||||| |||||| ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  27054869 gggtgtttgcggtgcggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 27054770  T
Q  129 aa 130  Q
    ||    
T  27054769 aa 27054768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 43908621 - 43908763
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||||||||| |||||| ||| |||| || | |||||||||| | ||||| | |||||| || || ||| | | ||||||| || |||||||||||    
T  43908621 gggtgtttgcggtgcagtttgattcagtttcgaagttaaaagtcattcaaaccgtatgataaaaaaatacgcggtctggtttggtccggttgacttttaa 43908720  T
Q  129 aataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||| |  |||||||||||||| |||||| |||| ||||||    
T  43908721 aataaaa-tcaaaccaaatcaatgtgatttgagttggttcggtt 43908763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 35820204 - 35820107
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||| |||||||||||||  ||||| |||||| ||| | || ||||||||| |||  ||||||||| |||||||||||||||||||  ||||||||    
T  35820204 ggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 35820107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 49011196 - 49011311
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| |||||| | |||  ||||||||||||||||||||| ||  |||| |||||||||| || |||||| || |||||| |||| |||||||| |||    
T  49011196 ggtgttcgcggtgcaatttaattcggttttgaggctaaaagttatgtgaactgcaagataaa-aaatatgcggttaagtttgattcggttgactttcaaa 49011294  T
Q  130 ataaaatttgaaccaaa 146  Q
    || ||||| ||||||||    
T  49011295 atgaaattcgaaccaaa 49011311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 34750949 - 34751040
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||| ||||| |||||||||||||| |||| ||||| ||| | |||||||||  || |||||||| | |||| ||||||||||||||    
T  34750949 gtttggttcagtttttaggctaaaagtcattcgaatcgcaatatataaaagtatgcgggttggtttggtttggttgatttttaaaataaaat 34751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 11399079 - 11399125
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||    
T  11399079 gtttggttcgcttttgaggctaaaattcatccgaaccgcaagataaa 11399125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 47903200 - 47903294
Alignment:
Q  36 tgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||  ||||||||||||||| ||  ||||| |||||| |||||| ||||||| ||| ||||| ||| |||||||||| |||| ||||||||    
T  47903200 tgcggtgcggtttggttcggttttaagcataaaaatcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 47903294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 26525063 - 26524971
Alignment:
Q  44 agtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||||||||||||| ||||||||||| |||||  ||  ||||| ||  ||||| ||| | |||||||| || ||||||||||||||||    
T  26525063 agtttggttcggttttgagactaaaagtcattcgaacaacatcataaaaaaacatgcggtttgggttggttcggttaacttttaaaataaaat 26524971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 27456325 - 27456413
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatt 137  Q
    |||| ||||| || ||||||||||||| |||||| | |||||| ||| ||||| ||| |||| ||||  ||||||||||||||||||||    
T  27456325 ggtttggtttcgaagctaaaagtcatctgaaccgtacgataaaaaagcatgcggtttggtttagttctgttgacttttaaaataaaatt 27456413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 135
Target Start/End: Complemental strand, 27215333 - 27215222
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgc-----gatttagtttggttcgattgact 123  Q
    ||||||| | |||| |||||||||| |||||||  ||||| |||| ||||||||||||||||| ||  || |     ||||| |||||||||| ||||||    
T  27215333 gggtgttcgtggtgcagtttggttcagttttgaaactaaatgtcacccgaaccgcaagataaaaaaacatacggtttgattttgtttggttcggttgact 27215234  T
Q  124 tttaaaataaaa 135  Q
    ||||||||||||    
T  27215233 tttaaaataaaa 27215222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 5932644 - 5932726
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    |||||||||||  ||||| ||||||||||||  ||||||||||| ||||||| ||||||  ||| ||||| ||| ||||||||    
T  5932644 tgtttgcggtgcggtttgattcggttttgagcataaaagtcatctgaaccgcgagataagaaagcatgcggtttggtttggtt 5932726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 18673327 - 18673241
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttc 115  Q
    ||||||| ||||||   |||||||||||||||||  |||||||||||| |||||| ||||||| ||| ||| ||||| |||| ||||    
T  18673327 gggtgttcgcggtgcgatttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtgatttggtttagttc 18673241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 7209390 - 7209305
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||||||||||||   |||||||||||| |||| | ||||||| ||| || || ||| |||||||||| |||| ||||||||    
T  7209390 gtttggttcggttttgaatataaaagtcatccaaaccacgagataaaaaagcatacggtttggtttggttcggttgatttttaaaa 7209305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 152
Target Start/End: Complemental strand, 7686035 - 7685932
Alignment:
Q  52 tcggttttgaggctaaaagtcatccgaaccgcaagataaataag---tatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatc 148  Q
    ||||||||||| ||||||||||| | |||||||| ||||| ||    |||| | |||  ||||||||  |||| |||||||||||||||||||||||| |    
T  7686035 tcggttttgagactaaaagtcattcaaaccgcaaaataaaaaaaaaatatgtggtttgatttggttcatttgatttttaaaataaaatttgaaccaaacc 7685936  T
Q  149 aatg 152  Q
    ||||    
T  7685935 aatg 7685932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 31876770 - 31876666
Alignment:
Q  25 gtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactt 124  Q
    ||||||||||| ||||||  ||||| ||||||||||||  |||||||||||| |||||| | ||||| ||| ||||  ||| ||| |||||| |||| ||    
T  31876770 gtaagggtgttcgcggtgcggtttg-ttcggttttgagcataaaagtcatccaaaccgcgaaataaaaaagcatgcagtttggttcggttcggttgattt 31876672  T
Q  125 ttaaaa 130  Q
    ||||||    
T  31876671 ttaaaa 31876666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 30079717 - 30079622
Alignment:
Q  36 tgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaa 135  Q
    |||||| | |||||||| | |||||| | ||||||||||||||| || |||||||| ||| |||||     |||||||| |||||||||| |||||||||    
T  30079717 tgcggtttggtttggtttgattttgaaggtaaaagtcatccgaatcgtaagataaaaaagcatgcg-----gtttggtttgattgactttaaaaataaaa 30079623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 31013185 - 31013137
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaa 79  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||||    
T  31013185 gtgtttgcggtgtagtttgcttcaattttgaggttaaaagtcatccgaa 31013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 46147198 - 46147278
Alignment:
Q  66 aaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||||  ||||| ||| |||| ||| |||||  || |||||||| | ||||||||||||||||||| |||||||||    
T  46147198 aaaagtcatctaaaccgtaaggtaaaaaagcatgcggattggtttggtttggttgacttttaaaataaaatctgaaccaaa 46147278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 31983115 - 31983032
Alignment:
Q  47 ttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||||||  ||||||| |||| |||||| ||||||| || |||||  ||| |||||||||  |||| ||||||||    
T  31983115 ttggttcggttttgagcataaaagttatccaaaccgcgagataaaaaaatatgcagtttggtttggttcagttgatttttaaaa 31983032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 7697247 - 7697336
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    |||||||||||||||||| ||||||||   ||||| |||||||| | ||||||| |  || |||||||||  |||| ||||||||||||||    
T  7697247 tttggttcggttttgaggttaaaagtccgtcgaactgcaagatacaaaagtatgtg-gttggtttggttctgttgaattttaaaataaaat 7697336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 29211785 - 29211723
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    ||||||| ||||||   |||||||||||||| ||||||||| |||| ||||| ||||||||||    
T  29211785 gggtgttcgcggtgcgatttggttcggttttaaggctaaaactcattcgaactgcaagataaa 29211723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 45898197 - 45898135
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    ||||||| ||||||  |||||||||||||||| |  |||||||||||| |||||| |||||||    
T  45898197 gggtgttcgcggtgcggtttggttcggttttgtgcataaaagtcatccaaaccgcgagataaa 45898135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 2308174 - 2308137
Alignment:
Q  107 gtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  2308174 gtttggttcggttgatttttaaaataaaatttgaacca 2308137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 3213359 - 3213258
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  3213359 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 3213260  T
Q  129 aa 130  Q
    ||    
T  3213259 aa 3213258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 8769100 - 8768999
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  8769100 gggtgttcgcggtgcggtttggttcggtttcaagtataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 8769001  T
Q  129 aa 130  Q
    ||    
T  8769000 aa 8768999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 10671766 - 10671867
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  10671766 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 10671865  T
Q  129 aa 130  Q
    ||    
T  10671866 aa 10671867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 12117545 - 12117646
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||  ||| |||||||||| |||| ||||||    
T  12117545 gggtgtttgcggtgcggtttggttcggtttcaagtataataatcatccaaaccgcgagagaaaaaagcatgcagtttggtttggttcggttgatttttaa 12117644  T
Q  129 aa 130  Q
    ||    
T  12117645 aa 12117646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 22701389 - 22701340
Alignment:
Q  97 atgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||||||| |||| || ||||||||||||||| |||||| ||||||||    
T  22701389 atgcgatttaatttgatttgattgacttttaaaagaaaattcgaaccaaa 22701340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 47069614 - 47069715
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  47069614 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 47069713  T
Q  129 aa 130  Q
    ||    
T  47069714 aa 47069715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 47204594 - 47204493
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  47204594 gggtgttcgcggtgcggtttggttcggtttcaagcataacaatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 47204495  T
Q  129 aa 130  Q
    ||    
T  47204494 aa 47204493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 1335263 - 1335311
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatcc 76  Q
    |||||||| ||| || |||||||||||||||||||  ||||||||||||    
T  1335263 agggtgttcgcgttgcagtttggttcggttttgagcataaaagtcatcc 1335311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 10069136 - 10069240
Alignment:
Q  26 taagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttt 125  Q
    ||||| |||| ||||||  ||||||||||||||||||  |||||||||||  |||||| | ||||| ||  ||||  ||| ||||| |||| |||| |||    
T  10069136 taaggatgttcgcggtgcggtttggttcggttttgagcataaaagtcatctaaaccgcgatataaaaaaacatgctgtttggtttgattcggttgatttt 10069235  T
Q  126 taaaa 130  Q
    |||||    
T  10069236 taaaa 10069240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 11218911 - 11219016
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||||||||| | |||| ||    
T  11218911 gtttggttcgattttgaggctaaaagtcatccgaaacgcaagataaataagtatgcgatttggtttggtttggttgacttttaaaataaagtctgaatca 11219010  T
Q  145 aatcaa 150  Q
    ||||||    
T  11219011 aatcaa 11219016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 24682209 - 24682120
Alignment:
Q  47 ttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  24682209 ttggttcggttttgaggctaaaattcatccgaaccgcaagataaataagtatgcagtttggtttgattcgattgacttttaaaataaaat 24682120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 22811310 - 22811194
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||| | |||||||||||||||||||| |||| |||||||||||| ||||||  ||| |||||||||| |||||||||||    
T  22811310 gggtgttcgcggtgcggtttggtttgattttgaggctaaaagtcatctgaactgcaagataaatatgtatgctgtttggtttggttcggttgacttttaa 22811211  T
Q  129 aataaaatttgaaccaa 145  Q
    |||||||||||||||||    
T  22811210 aataaaatttgaaccaa 22811194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 33565900 - 33566019
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagat--aaataagtatgcgatttagtttggttcgattgactttt 126  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||  ||||||||||||  ||| ||||||||| ||| |||||||||| ||||||| |    
T  33565900 gggtgtttgcggtgcagtttggtttggttttgaggctaaaagtcatttgaaccgcaagataaaaaaaagtatgcggtttggtttggttcggttgacttct 33565999  T
Q  127 aaaataaaatttgaaccaaa 146  Q
    ||||||||||| ||||||||    
T  33566000 aaaataaaattcgaaccaaa 33566019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 7428559 - 7428453
Alignment:
Q  40 gtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttg 139  Q
    |||| ||||||||||||| ||||| ||||||||||| |||||||| |||||| | | ||||| ||| |||||||||| |||||||||||||||||||| |    
T  7428559 gtgtggtttggttcggttatgaggttaaaagtcatctgaaccgcatgataaaaatgcatgcggtttggtttggttcggttgacttttaaaataaaattcg 7428460  T
Q  140 aaccaaa 146  Q
    |||||||    
T  7428459 aaccaaa 7428453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 44672733 - 44672835
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||| || ||| ||||||| ||  ||||| ||| ||||||||||||||| |||||    
T  44672733 agggtgtttgcggtgcagtttggttcggttttgagcataaaagtcatccaaatcgcgagataaaaaaacatgcggtttggtttggttcgattgattttta 44672832  T
Q  128 aaa 130  Q
    |||    
T  44672833 aaa 44672835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 4785181 - 4785298
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| |||||  | |||||||||||||||||  |||||||||| |||||||||  ||||| ||||||||| |||  ||||||||| |||||||||||    
T  4785181 gggtgttcgcggtacaatttggttcggttttgagattaaaagtcatacgaaccgcagaataaaaaagtatgcggtttgatttggttcggttgacttttaa 4785280  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||| ||| |||||||||    
T  4785281 aatataatatgaaccaaa 4785298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 44336719 - 44336835
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    ||||| ||||||  ||||||||||||||||||  |||||||||||||||||||||||| ||| ||  ||||| ||| |||||||||| ||||||||||||    
T  44336719 gtgttcgcggtgcggtttggttcggttttgagtttaaaagtcatccgaaccgcaagataaaaaaaacatgcggtttggtttggttcggttgacttttaaa 44336818  T
Q  130 ataaaatttgaaccaaa 146  Q
    ||| |||  ||||||||    
T  44336819 atacaatccgaaccaaa 44336835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 12883867 - 12883780
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcg 116  Q
    ||||||| ||||||  ||||||||||||||||||| |||||||||| |||||| ||| ||||||||||||||| ||| ||||||||||    
T  12883867 gggtgttcgcggtgcggtttggttcggttttgaggttaaaagtcattcgaaccacaaaataaataagtatgcggtttggtttggttcg 12883780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 9012969 - 9012857
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||| | |||||||| |||||||||||||||||| ||||||||||||||||| | || ||||     |||||||| |||||||||||||    
T  9012969 gggtgttcgcggtgtgggttggttcgattttgaggctaaaagtcacccgaaccgcaagataaaaatgtgtgcg-----gtttggtttgattgacttttaa 9012875  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||| |||  ||||||||    
T  9012874 aatacaatccgaaccaaa 9012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 10661099 - 10661200
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||  |||||||||||| |||||| ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  10661099 gggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 10661198  T
Q  129 aa 130  Q
    ||    
T  10661199 aa 10661200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 33068227 - 33068312
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||||||||  |||||||||||| |||||||||||||| ||| ||||| ||| |||||||||  |||| ||||||||    
T  33068227 gtttggttcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttggttcagttgatttttaaaa 33068312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 14549166 - 14549270
Alignment:
Q  26 taagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttt 125  Q
    |||||||||| ||||||| ||||| ||||||||||||  |||||||||||| |||||  ||||||| || |||||| ||| ||||| |||| |||| |||    
T  14549166 taagggtgttcgcggtgtggtttgattcggttttgagcataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttgattcggttgatttt 14549265  T
Q  126 taaaa 130  Q
    |||||    
T  14549266 taaaa 14549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 40436381 - 40436496
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagt-atgcgatttagtttggttcgattgactttta 127  Q
    ||||||| ||||||  ||||||||||||||||||| ||||||| |||| ||  |||||||||| ||   ||||  ||| |||||||||| |||||||| |    
T  40436381 gggtgttcgcggtgcggtttggttcggttttgagggtaaaagtgatccaaattgcaagataaaaaaaacatgccgtttggtttggttcggttgactttaa 40436480  T
Q  128 aaataaaatttgaacc 143  Q
    ||||||||||||||||    
T  40436481 aaataaaatttgaacc 40436496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 12193514 - 12193452
Alignment:
Q  110 tggttcgattgacttttaaaataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||||||||||||||||||||||| |||||||||||||||   |||| ||||||||||||    
T  12193514 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggtt 12193452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 12437942 - 12437880
Alignment:
Q  110 tggttcgattgacttttaaaataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||||||||||||||||||||||| |||||||||||||||   |||| ||||||||||||    
T  12437942 tggttcgattgacttttaaaataaaatctgaaccaaatcaatgcggtttggattggatcggtt 12437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 36340877 - 36340780
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||| |||||||||||||  ||||| |||||| ||| | || ||||||||| |||  ||||||||| |||||||||||||||||||  ||||||||    
T  36340877 ggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 36340780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 36910468 - 36910367
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||| | |||||||  |||||||||||  |||||| ||||||| ||| ||||| |||||||||||||| |||| ||||||    
T  36910468 gggtgttcgcggtgcggtttggtttgattttgagcataaaagtcatcaaaaccgcgagataaaaaagcatgcggtttagtttggttcggttgatttttaa 36910369  T
Q  129 aa 130  Q
    ||    
T  36910368 aa 36910367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 28073328 - 28073204
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||| | || ||| ||||||||||||||| ||||||||| ||||| ||  ||| | |||||||||||||  |||||||||||    
T  28073328 gggtgttcgcggtgcggtttggcttgggtttaaggctaaaagtcatctgaaccgcaatataaaaaaacatgtggtttagtttggttcagttgacttttaa 28073229  T
Q  129 aataaaatttgaaccaaatcaatgt 153  Q
    ||| |||   |||||||| ||||||    
T  28073228 aatgaaaaccgaaccaaaccaatgt 28073204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 45366268 - 45366355
Alignment:
Q  44 agtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||||||| ||||||||||| ||||||||||  ||||||||||||||| ||| || || |||  ||||||||| ||| ||||||||||    
T  45366268 agtttggtccggttttgaggttaaaagtcatatgaaccgcaagataaaaaagcatacggtttgatttggttcggttgccttttaaaat 45366355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 30392084 - 30392169
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    ||||||||||||||  ||  ||||||||||||||  |||||||||||| |||||| ||||||| ||| ||||| ||| ||||||||    
T  30392084 gggtgtttgcggtgcggtgcggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtt 30392169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 31497729 - 31497661
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||| ||| | ||| ||| ||||||||    
T  31497729 tttggtttggttttgaaggtaaaagtcatccgaaccgcaagataaaaaagcacgcggtttggtttggtt 31497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 28441448 - 28441494
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||    
T  28441448 gtttggttcgattttgaggctaaaagtcatcggaaccgcaaaataaa 28441494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 11017015 - 11017063
Alignment:
Q  34 tttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccg 82  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||    
T  11017015 tttgcggtgcggtttggttcgattttgaggctaaaattcatccgaaccg 11017063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 8035988 - 8036075
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcg 116  Q
    |||||||  ||||| |||||  |||||||| || | ||||||||||| ||||||||||||||| ||| ||||  ||| ||||||||||    
T  8035988 gggtgttcacggtgcagtttcattcggtttagaaggtaaaagtcatctgaaccgcaagataaaaaagcatgcagtttggtttggttcg 8036075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 19539328 - 19539390
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    ||||||| | ||||| | |||||||||||||| |||||||||| ||||||||  |||||||||    
T  19539328 gggtgttcgtggtgtgggttggttcggttttggggctaaaagttatccgaacttcaagataaa 19539390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 13325289 - 13325361
Alignment:
Q  73 atccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||| ||||| | ||||||||||||||| |||||  |||||||| |||| |||||||||| ||| |||||||||    
T  13325289 atccaaaccgtaggataaataagtatgcaattta-attggttcggttgaattttaaaatataatctgaaccaaa 13325361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 15272427 - 15272358
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    ||||||| ||||||||||  |||||||||||||||| ||| |||||| ||| | ||| ||| ||||||||    
T  15272427 gtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtt 15272358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 15452796 - 15452727
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    ||||||| ||||||||||  |||||||||||||||| ||| |||||| ||| | ||| ||| ||||||||    
T  15452796 gtttggtacggttttgagattaaaagtcatccgaacggcaggataaaaaagcacgcggtttggtttggtt 15452727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 3006708 - 3006608
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| |||||||    
T  3006708 ggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaaa 3006609  T
Q  130 a 130  Q
    |    
T  3006608 a 3006608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 7e-34; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 41461027 - 41461144
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| |||||| |||||||||||||||| || |||||||||| |||||||||||| |||| ||||||||| ||| |||||||||| |||||||||||    
T  41461027 gggtgttcgcggtgcagtttggttcggtttttagactaaaagtcaaccgaaccgcaagctaaaaaagtatgcggtttggtttggttcggttgacttttaa 41461126  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||| ||||||||    
T  41461127 aataaaattcgaaccaaa 41461144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 12041726 - 12041603
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||  ||||| |||  ||||||||| |||||||||||    
T  12041726 gggtgtttgcggtgtggtttggttcggttttgaggctaaaagtcatctgaaccgtaagataaaaaaacatgcggtttgatttggttcggttgacttttaa 12041627  T
Q  129 aataaaatttgaaccaaatcaatg 152  Q
    ||||||||  |||||||| |||||    
T  12041626 aataaaatccgaaccaaaccaatg 12041603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 17762687 - 17762808
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||| |||| ||| |||||||||||||||||||| ||||||||| ||||||| ||  ||||| ||| |||||||||| |||||||||||    
T  17762687 gggtgttcgcggtgtggttttgtttggttttgaggctaaaagtcaaccgaaccgcgagataaaaaaacatgcggtttggtttggttcggttgacttttaa 17762786  T
Q  129 aataaaatttgaaccaaatcaa 150  Q
    ||||||||  ||||||||||||    
T  17762787 aataaaatccgaaccaaatcaa 17762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 27301621 - 27301504
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||| || |||||||||||||||||||  |||||| |||||| ||||||||||||| ||| ||||| ||| ||||| |||| |||||||||||    
T  27301621 gggtgttcgcgctgcagtttggttcggttttgagattaaaagccatccggaccgcaagataaaaaagcatgcggtttggtttgattcggttgacttttaa 27301522  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||||||||||||    
T  27301521 aataaaatttgaaccaaa 27301504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 5862768 - 5862651
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||| || | |||||||| |||||||||||  || ||||| ||||| ||||||||| ||| |||||||||| |||||||||||    
T  5862768 gggtgttcgcggtgcggtttgatttgattttgagggtaaaagtcatctaaatcgcaaaataaaaaagtatgcggtttggtttggttcggttgacttttaa 5862669  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||  ||||||||    
T  5862668 aataaaatccgaaccaaa 5862651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 44979906 - 44979805
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||  |||||||||||| |||||| ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  44979906 gggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 44979807  T
Q  129 aa 130  Q
    ||    
T  44979806 aa 44979805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 44085450 - 44085578
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataa-gtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacc 143  Q
    ||||||||| ||||||||| | ||||||||| ||||||||||||||| || | ||||| ||| |||||||||| |||||||| |||||||||| |||| |    
T  44085450 gtttggttcagttttgagggttaaagtcatctgaaccgcaagataaaaaaagcatgcggtttggtttggttcggttgactttaaaaataaaatctgaatc 44085549  T
Q  144 aaatcaatgtaatttgaattggatcggtt 172  Q
    ||| |||||   ||||  |||||||||||    
T  44085550 aaaccaatgcggtttgggttggatcggtt 44085578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 13193864 - 13193965
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatc 148  Q
    ||||||||||| ||||||||| ||||  |||||| |||||||| ||| || |  ||| |||||||||| |||||||||||||||||||  ||||||||||    
T  13193864 ggttcggttttaaggctaaaaatcatttgaaccgtaagataaaaaagcatactgtttggtttggttcggttgacttttaaaataaaatccgaaccaaatc 13193963  T
Q  149 aa 150  Q
    ||    
T  13193964 aa 13193965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 28790467 - 28790558
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||| ||||||| | ||||||||||| ||||||||||||||| ||| ||||| |||  || | |||| |||||||||||||||||||    
T  28790467 gtttggttcagttttgatgttaaaagtcatctgaaccgcaagataaaaaagcatgcggtttgattagattcggttgacttttaaaataaaat 28790558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 10242885 - 10242758
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagt-atgc-gatttagtttggttcgattgactttt 126  Q
    |||||||||||||| |||||||||||||||||| || ||||||||| | |||| ||||||||  |||| |||| | ||||||||| |||| || | ||||    
T  10242885 gggtgtttgcggtggagtttggttcggttttgaagcaaaaagtcattcaaaccacaagataa--aagtcatgctgttttagtttgattcggttcaatttt 10242788  T
Q  127 aaaataaaatttgaaccaaatcaatgtaat 156  Q
    |||||||||| ||||| ||| ||| |||||    
T  10242787 aaaataaaatctgaactaaaccaaagtaat 10242758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 1330955 - 1331079
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||| ||  ||||| ||||||||| || | |||| ||||||||||| |||| |||| ||| ||||   || |||||||||| |||||||||||    
T  1330955 gggtgtttgcgatgcggtttgattcggttttaagacgaaaaatcatccgaaccacaaggtaaaaaagcatgcagattggtttggttcggttgacttttaa 1331054  T
Q  129 aataaaatttgaaccaaatcaatgt 153  Q
    ||||||||   ||||||| ||||||    
T  1331055 aataaaatccaaaccaaaccaatgt 1331079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 12884479 - 12884594
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||||||||||  |||||||||| |||| ||| |||||||||||| ||| ||| | |||| |||||||||     |||||||| | ||||||||||||||    
T  12884479 tgtttgcggtgcggtttggttcgattttaaggttaaaagtcatccaaactgcatggtaaaaaagtatgcg-----gtttggtttggttgacttttaaaat 12884573  T
Q  132 aaaatttgaaccaaatcaatg 152  Q
    ||||||  ||||||| |||||    
T  12884574 aaaattcaaaccaaaccaatg 12884594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 44035267 - 44035353
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||||||||  |||||||||||| |||||||| || ||| ||| ||||| ||| |||||||||| |||| ||||||||    
T  44035267 gtttggttcggttttgagcataaaagtcatccaaaccgcaaaataaaaaaagcatgcggtttggtttggttcggttgatttttaaaa 44035353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 42785766 - 42785665
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||| |||||||  |||||||||||| || ||  ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  42785766 gggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaatcgtgagataaaaaaggatgcggtttggtttggttcgcttgatttttaa 42785667  T
Q  129 aa 130  Q
    ||    
T  42785666 aa 42785665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 30759768 - 30759668
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaa 145  Q
    |||||||| ||||||||| ||||||||||| |   | ||| ||||| ||| ||||  ||| ||||| |||| ||| ||||||||||||||||||||||||    
T  30759768 tttggttcagttttgaggttaaaagtcatctgggtcacaaaataaaaaagcatgcagtttggtttgattcggttggcttttaaaataaaatttgaaccaa 30759669  T
Q  146 a 146  Q
    |    
T  30759668 a 30759668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 15320716 - 15320609
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||| ||||||||||||||||||||| |||||  |  |||| ||| ||||  ||  |||||||||  |||| ||||||    
T  15320716 gggtgttcgcggtgcggtttggttcgattttgaggctaaaagtcatccaaaccgtgaagtaaaaaagcatgcagttaggtttggttcagttgatttttaa 15320617  T
Q  129 aataaaat 136  Q
    ||||||||    
T  15320616 aataaaat 15320609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 25298389 - 25298287
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    |||||||| |||||| |||||||||||||||||||  |||||||||||  ||| || ||||||| ||  || || ||  |||||||||| |||| |||||    
T  25298389 agggtgttcgcggtgcagtttggttcggttttgagcataaaagtcatcgaaactgcgagataaaaaaacattcggttcggtttggttcggttgattttta 25298290  T
Q  128 aaa 130  Q
    |||    
T  25298289 aaa 25298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 19937261 - 19937161
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||| || ||||||  |||||||||||| |||||| ||||||| ||  ||| | ||| ||||||||||||||| ||||||    
T  19937261 gggtgttcgcggtgcggtttggttaggatttgagcataaaagtcatccaaaccgcgagataaaaaaacatg-ggtttggtttggttcgattgatttttaa 19937163  T
Q  129 aa 130  Q
    ||    
T  19937162 aa 19937161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 21480909 - 21480836
Alignment:
Q  69 agtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaac 142  Q
    |||||||||||| |||||||||  ||| || | ||||  ||||||||| ||||||||||||||||||| |||||    
T  21480909 agtcatccgaactgcaagataagaaagcatacaattttatttggttcggttgacttttaaaataaaatctgaac 21480836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 36500750 - 36500713
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccg 82  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  36500750 gtttgattcggttttgaggctaaaagtcatccgaaccg 36500713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 43452099 - 43452162
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||| || ||||||||||||||| |||||| | ||||| |||||||||| | ||||||||    
T  43452099 agggtgttcgcagtgtagtttggttcgattttgaaggtaaaaatcatccgaactgtaagataaa 43452162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 34910256 - 34910318
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||||||||| |||||||||| ||||||||  ||||| |||| | |||||| |||||||    
T  34910256 gggtgtttgcggtgcagtttggttcagttttgagcataaaaatcattcaaaccgcgagataaa 34910318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 11375867 - 11375948
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||| ||  |||||||||||| |||||| ||||||| ||  ||||  ||| |||||||||| |||| ||||||||    
T  11375867 ggttcggttttaagcataaaagtcatccaaaccgcgagataaaaaaacatgcagtttggtttggttcggttgatttttaaaa 11375948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 12841491 - 12841576
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    |||||||||||||| ||||| |||||||||||||  ||||| ||||  ||| || |||||||| | | ||||| ||| ||||||||    
T  12841491 gggtgtttgcggtgcagttttgttcggttttgagattaaaaatcatatgaatcgtaagataaaaatgcatgcggtttggtttggtt 12841576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 16578597 - 16578682
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| ||||||||||||||| ||||||||    
T  16578597 gtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcgattgatttttaaaa 16578682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 36075371 - 36075448
Alignment:
Q  55 gttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaata 132  Q
    ||||||||| ||||||| |||||||||||| |||||| ||| ||| | ||| ||||| |||  || ||||||||||||    
T  36075371 gttttgaggttaaaagttatccgaaccgcaggataaaaaagcatgtggtttggtttgattcagttcacttttaaaata 36075448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 36413777 - 36413676
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  36413777 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 36413678  T
Q  129 aa 130  Q
    ||    
T  36413677 aa 36413676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 146
Target Start/End: Complemental strand, 30761872 - 30761776
Alignment:
Q  50 gttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||| |||||||| ||||||||||| ||| | ||||||||| ||  ||||| |||  |||| ||   ||||||||||||||||||||  |||||||    
T  30761872 gttcgattttgaggttaaaagtcatctgaatcacaagataaaaaaacatgcggtttgttttgattatgttgacttttaaaataaaattcaaaccaaa 30761776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 9686003 - 9686126
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||| || ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||| || ||||||||    
T  9686003 gggtgttcgcgatgcagtttggttcgattttgaggctcaaagtcatctgaaccgcaagataaataagtatgcggtttggtttggttcggttaacttttaa 9686102  T
Q  129 aataaaatttgaaccaaatcaatg 152  Q
    ||||||||  |||||||| |||||    
T  9686103 aataaaatccgaaccaaaccaatg 9686126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 45 - 171
Target Start/End: Complemental strand, 24645073 - 24644948
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||||||   |||||    
T  24645073 gtttggttcgattttgaggttaaaagtcatccgaaccgcaagataaataagtatgcggtttggtttgattcg-ttgacttttaaaataaaatccaaacca 24644975  T
Q  145 aatcaatgtaatttgaattggatcggt 171  Q
    || ||||| | |||| |||||||||||    
T  24644974 aaccaatgcagtttggattggatcggt 24644948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 22413783 - 22413896
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| | |||| |||||| || |||||||||| |||||||||||||||||  |||||||||||||||||| ||| |||||||||| |||||||||||    
T  22413783 gggtgttcgaggtgcagtttgatttggttttgaggttaaaagtcatccgaaccagaagataaataagtatgcggtttggtttggttcggttgacttttaa 22413882  T
Q  129 aataaaatttgaac 142  Q
    |||||||| |||||    
T  22413883 aataaaatctgaac 22413896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 19135249 - 19135132
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||| |||||| ||| | ||| || |||||| ||| |||||||||| |||||||||||    
T  19135249 ggtgttcgcggtgtggtttggttcggttttgaggcaaaaagtcatctgaaccgaaaggtaaaaaaaatatgcggtttggtttggttcggttgacttttaa 19135150  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||||||| |||||||||    
T  19135149 aataaaatatgaaccaaa 19135132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 31945563 - 31945459
Alignment:
Q  27 aagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttt 126  Q
    ||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||      ||||||||| |||||||||    
T  31945563 aagggtgttcgcggtgtggtttgtttcggttttgaggttaaaagtcatccgaaccgtaagataaaaaagtatgcg-----ttttggttcggttgactttt 31945469  T
Q  127 aaaataaaat 136  Q
    ||||||||||    
T  31945468 aaaataaaat 31945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 29048075 - 29048179
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||| ||||||  ||||||||||||||| ||| |||||||||||| ||||  ||| |||| | || |||||||| |||||||||| ||||||||||||||    
T  29048075 tgttcgcggtgcggtttggttcggttttaaggttaaaagtcatccaaaccataaggtaaaaaggtgtgcgatttggtttggttcggttgacttttaaaat 29048174  T
Q  132 aaaat 136  Q
    |||||    
T  29048175 aaaat 29048179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 892477 - 892374
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| ||||||  |||||||||  |||| ||||||||||||||||||||||||| ||||| ||  ||||| ||| |||||||||| || |||||||||    
T  892477 ggtgttcgcggtgcggtttggttcaattttaaggctaaaagtcatccgaaccgcaaaataaaaaaacatgcggtttggtttggttcggttaacttttaaa 892378  T
Q  130 ataa 133  Q
    ||||    
T  892377 ataa 892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 11416994 - 11417108
Alignment:
Q  23 acgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataagtatgcgatttagtttggttcgattga 121  Q
    ||||| |||| |||||||||  |||||||||| |||| ||||||||| |||||||||||| ||| | ||| ||||||||  |||  ||||||| ||||||    
T  11416994 acgtatgggtatttgcggtgcggtttggttcgatttttaggctaaaattcatccgaaccgtaagctgaaaaaagtatgctgtttgatttggtttgattga 11417093  T
Q  122 cttttaaaataaaat 136  Q
    |||||||||||||||    
T  11417094 cttttaaaataaaat 11417108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 8135381 - 8135442
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataa 90  Q
    ||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  8135381 gggtgttcgcggtgcgttttggttcggttttgaggctaaaagtcatccgaaccgcaagataa 8135442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 28632897 - 28632997
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||||||||  |||||||| |||| ||||| | ||||| |||||||| ||  ||||||||| |||||||||| |||||||||||||||| ||||||||||    
T  28632897 gtttggttcaattttgaggttaaa-gtcattcaaaccgtaagataaaaaaacatgcgattttgtttggttcggttgacttttaaaataatatttgaacca 28632995  T
Q  145 aa 146  Q
    ||    
T  28632996 aa 28632997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 35040347 - 35040246
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||  |||||||||||| |||||| ||||||| ||| ||||| ||| |||||||| | |||| ||||||    
T  35040347 gggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtttggttgatttttaa 35040248  T
Q  129 aa 130  Q
    ||    
T  35040247 aa 35040246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 9909025 - 9909136
Alignment:
Q  41 tgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttga 140  Q
    ||||||||||||| |||| ||| |||||||| ||||||||||||||||| | ||| ||| ||| |  ||||||||| ||| |||||||||| ||| | ||    
T  9909025 tgtagtttggttcagtttagagactaaaagttatccgaaccgcaagatagaaaagcatgtgatatgttttggttcggttggcttttaaaatgaaagtcga 9909124  T
Q  141 accaaatcaatg 152  Q
    |||||| |||||    
T  9909125 accaaaccaatg 9909136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 10391159 - 10391073
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttc 115  Q
    ||||||| ||||||| ||||||||||||||||||  |||||||||| |||||||| ||||||| ||| ||||  ||| |||||||||    
T  10391159 gggtgttcgcggtgtggtttggttcggttttgagcataaaagtcattcgaaccgcgagataaaaaagcatgctgtttggtttggttc 10391073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 10494518 - 10494417
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  |||||||| |||||||||  |||||||||||| |||||| ||||||| ||| ||| | |||  ||||||||| |||| ||||||    
T  10494518 gggtgtttgcggtgcggtttggtttggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatggggtttgatttggttcggttgatttttaa 10494419  T
Q  129 aa 130  Q
    ||    
T  10494418 aa 10494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 10590812 - 10590897
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||||||||  |||||||||||| ||| || ||||||| ||| ||||| ||| |||||||||| |||| ||||||||    
T  10590812 gtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaaaa 10590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 14940693 - 14940592
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||| ||||||||| ||| |||| || ||||||||||||||||||| ||  ||||  ||| |||||||||| ||||||||| |||||||||  ||||||    
T  14940693 gtttgattcggttttaaggttaaaggttatccgaaccgcaagataaaaaaacatgcagtttggtttggttcggttgactttttaaataaaatccgaacca 14940594  T
Q  145 aa 146  Q
    ||    
T  14940593 aa 14940592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 6266851 - 6266951
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||| ||||||  ||||||| ||||||||||| ||| |||||||||||||| || ||||| ||  ||||| ||| ||||||| || |||||||||||||    
T  6266851 gtgttcgcggtgcggtttggtacggttttgaggttaatagtcatccgaaccgtaaaataaaaaaacatgcggtttggtttggtacggttgacttttaaaa 6266950  T
Q  131 t 131  Q
    |    
T  6266951 t 6266951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 12108703 - 12108584
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaat-aagtatgcgatttagtttggttcgattgactttt 126  Q
    |||||||| |||||| | |||||||||||||| || |||||||||||  ||| |||||| ||||| ||  ||||| |||  ||||||||  |||||||||    
T  12108703 agggtgttcgcggtgcaatttggttcggttttcagactaaaagtcatatgaatcgcaaggtaaataaaacatgcggtttgttttggttcagttgactttt 12108604  T
Q  127 aaaataaaatttgaaccaaa 146  Q
    |||||| | |||||||||||    
T  12108603 aaaatatagtttgaaccaaa 12108584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 30752513 - 30752576
Alignment:
Q  66 aaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||||||| ||||||||||||||| ||| ||||| ||| |||||||||| ||||||||||||    
T  30752513 aaaagtcatctgaaccgcaagataaaaaagcatgcggtttggtttggttcggttgacttttaaa 30752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 8064440 - 8064548
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagta--tgcgatttagtttggttcgattgactttt 126  Q
    ||||||| || ||| | ||| ||||||||||| |||||||| ||||||||||||||||||||| ||  |  || | ||| |||||||| |||||||||||    
T  8064440 gggtgttcgcagtgcattttagttcggttttg-ggctaaaaatcatccgaaccgcaagataaaaaaaaacatgtggtttggtttggtttgattgactttt 8064538  T
Q  127 aaaataaaat 136  Q
    ||||||||||    
T  8064539 aaaataaaat 8064548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 26645505 - 26645431
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt 119  Q
    |||| ||| |||||||||| |||||||||||||||||| ||| |||| || |||||| ||| |||||||||||||    
T  26645505 gtttagtttggttttgaggttaaaagtcatccgaaccgtaaggtaaaaaaatatgcggtttggtttggttcgatt 26645431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 26751471 - 26751397
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt 119  Q
    |||| ||| |||||||||| |||||||||||||||||| ||| |||| || |||||| ||| |||||||||||||    
T  26751471 gtttagtttggttttgaggttaaaagtcatccgaaccgtaaggtaaaaaaatatgcggtttggtttggttcgatt 26751397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 15859671 - 15859771
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||  |||||||| ||| |||||| |||| || ||| ||||| ||| ||||| |||| |||| ||||||    
T  15859671 gggtgttcgcggtgccgtttggttcggttttgagcataaaagtcttccaaaccgcgagattaaaaagcatgcggtttggtttgattcggttgatttttaa 15859770  T
Q  129 a 129  Q
    |    
T  15859771 a 15859771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 20500510 - 20500572
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    ||||||| ||||||  |||||||| |||||||||| |||||||||  ||||||||||||||||    
T  20500510 gggtgttcgcggtgcggtttggtttggttttgagggtaaaagtcactcgaaccgcaagataaa 20500572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 32190790 - 32190700
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||| |||||||||||||||||||| |||||| | |||||| ||  ||| | ||| ||||| || | || ||||||||||||||||    
T  32190790 tttggttcgattttgaggctaaaagtcatctgaaccgtatgataaaaaaacatgaggtttggtttgatttggttaacttttaaaataaaat 32190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 13091950 - 13092019
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtat 98  Q
    ||||||| | |||| |||||| |||| |||||||  ||| |||||||||||||| |||||||||||||||    
T  13091950 gggtgttcgtggtgcagtttgattcgattttgagattaatagtcatccgaaccgtaagataaataagtat 13092019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 13811006 - 13810905
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||| |||||||||   ||||||||||| |||||| ||||||| ||| || || ||| |||||||||  |||| ||||||    
T  13811006 gggtgttcgcggtgaggtttggtttggttttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatacggtttggtttggttcagttgatttttaa 13810907  T
Q  129 aa 130  Q
    ||    
T  13810906 aa 13810905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 5288040 - 5287940
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| ||||||  ||||||||||||||||||  |  ||||||||| ||| || ||||||||||  ||||  ||| |||||||||| |||| |||||||    
T  5288040 ggtgttcgcggtgcggtttggttcggttttgagcatttaagtcatccaaactgcgagataaataaacatgcagtttggtttggttcggttgatttttaaa 5287941  T
Q  130 a 130  Q
    |    
T  5287940 a 5287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 5874295 - 5874188
Alignment:
Q  23 acgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgac 122  Q
    ||||| ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| ||||     
T  5874295 acgtaggggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgat 5874196  T
Q  123 ttttaaaa 130  Q
    ||||||||    
T  5874195 ttttaaaa 5874188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 13532419 - 13532360
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaa-gtcatccgaaccgcaaga 87  Q
    ||||||||||||||  ||||||||||||||| ||| ||||| |||||||||||| |||||    
T  13532419 gggtgtttgcggtgcggtttggttcggttttaagggtaaaaggtcatccgaaccacaaga 13532360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 4562829 - 4562919
Alignment:
Q  56 ttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||||||||| ||||| || || ||||||||  |||||    ||| |||||||||  |||| |||||||||||||||| |||||||    
T  4562829 ttttgaggctaaaagacatcccaatcgtaagataaaagagtatttagtttggtttggttcagttgatttttaaaataaaatttaaaccaaa 4562919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 4577128 - 4577162
Alignment:
Q  117 attgacttttaaaataaaatttgaaccaaatcaat 151  Q
    ||||||||||||||||||| |||||||||||||||    
T  4577128 attgacttttaaaataaaacttgaaccaaatcaat 4577162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 25006451 - 25006365
Alignment:
Q  46 tttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaata 132  Q
    |||| ||||||||||||| |||| ||||||  ||||| |||||||| ||||||| |  || |||||||||  ||| |||||||||||    
T  25006451 tttgattcggttttgaggttaaatgtcatcttaaccgtaagataaaaaagtatgtgggttggtttggttcagttggcttttaaaata 25006365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 7170174 - 7170117
Alignment:
Q  89 aaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    ||||||||||||| ||| | |||| ||| ||||||||||||||||||||  |||||||    
T  7170174 aaataagtatgcggtttggattggatcggttgacttttaaaataaaattcaaaccaaa 7170117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 8135448 - 8135484
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaacc 81  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  8135448 gtttagttcggttttgaggctaaaagtcttccgaacc 8135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 48293542 - 48293399
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||| ||| |||||||||| ||| |||||||    
T  48293542 gggtgttcgcggtgcagtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttttaa 48293443  T
Q  129 aataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||||  |||||||| |||||   ||||  |||||||||||    
T  48293442 aataaaatccgaaccaaaccaatgcggtttgggttggatcggtt 48293399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 20986367 - 20986484
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||| ||  ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||| ||| |||||||||| ||||||| |||    
T  20986367 gggtgtttgcgatgcggtttgtttcggttttgaagctaaaagtcatccaaaccgcaagataaacaagtatgcggtttggtttggttcggttgacttataa 20986466  T
Q  129 aataaaatttgaaccaaa 146  Q
    |||||||| |||||||||    
T  20986467 aataaaatatgaaccaaa 20986484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 132
Target Start/End: Complemental strand, 23450119 - 23450018
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||||    
T  23450119 gtgtttgcggtgcagtttagttcggttttgaggttaaaagtcatccgaactgcaagataaataagtatgcggtttggtttggttcggttaacttttaaaa 23450020  T
Q  131 ta 132  Q
    ||    
T  23450019 ta 23450018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 4642383 - 4642470
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaata 132  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||  |||||||||||||||||||||||||    
T  4642383 gtttggttcggttttgaggctaaaagttatccgaaccgcaagataaataagtatgtagtttgatttggttcgattgacttttaaaata 4642470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 40806964 - 40806854
Alignment:
Q  20 tgtacgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt 119  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||  |||||||||||| |||||| ||||||| ||| ||||||||| |||||||||| ||    
T  40806964 tgtatgtaggggtgtttgcggtgtggtttggttcggttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcgatttggtttggttcggtt 40806865  T
Q  120 gacttttaaaa 130  Q
    || ||||||||    
T  40806864 gatttttaaaa 40806854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 31 - 147
Target Start/End: Original strand, 45464137 - 45464253
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||||||||||||||||||||||||||| |||||| | ||| |||| | ||||||| |||||| ||| |||  ||| ||||| |||||||||||||    
T  45464137 gtgtttgcggtgtagtttggttcggttttgagactaaaaattatctgaactgtaagataagtaagtacgcggtttgttttagttcgtttgacttttaaaa 45464236  T
Q  131 taaaatttgaaccaaat 147  Q
    |||| ||||||||||||    
T  45464237 taaattttgaaccaaat 45464253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 36106554 - 36106439
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgc-gatttagtttggttcgattgacttttaaaa 130  Q
    |||| ||||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||  |||| | ||| |||||||||| |||||||||||||    
T  36106554 tgttcgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaagataaaaaaacatgcggttttggtttggttcggttgacttttaaaa 36106455  T
Q  131 taaaatttgaaccaaa 146  Q
    ||||||  ||||||||    
T  36106454 taaaatccgaaccaaa 36106439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 48338287 - 48338393
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||| ||||||||| |||||||||||||||| ||| |||||||||||||||||| |||||||| ||  ||||  ||| |||||||||| |||||||||||    
T  48338287 gggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaa-aaacatgcagtttggtttggttcggttgacttttaa 48338385  T
Q  129 aataaaat 136  Q
    ||||||||    
T  48338386 aataaaat 48338393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 5122521 - 5122404
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||   |||| ||||||||| ||| ||||| |||  ||||||||| |||||||| ||    
T  5122521 gggtgtttgcggtgcggtttggttcggttttgagggtaaaagtcatataaaccacaagataaaaaagcatgcggtttgatttggttcggttgactttaaa 5122422  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||  ||||||||    
T  5122421 aataaaatccgaaccaaa 5122404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 23120394 - 23120293
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||| |||| |||||| | ||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||||| ||    
T  23120394 gggtgttcgcggtgcggtttgattcgattttgaaggtaaaagtcatccgaaccgcaagataaaaaagcatgcggtttggtttggttcgattgactttaaa 23120295  T
Q  129 aa 130  Q
    ||    
T  23120294 aa 23120293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 23626023 - 23625926
Alignment:
Q  44 agtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaa 141  Q
    ||||||| |||||||| ||| |||||||||||| || | ||| ||||| ||||||||| ||| |||||||||| ||||||||||||||||||| ||||    
T  23626023 agtttggctcggttttaaggttaaaagtcatccaaatcacaaaataaaaaagtatgcggttttgtttggttcgcttgacttttaaaataaaatctgaa 23625926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 2939878 - 2939980
Alignment:
Q  34 tttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataa 133  Q
    |||||||||| ||||| |||  |||| ||| |||||||| | |||||||||||||||| |||||||||||||||||||||||  |||| |||  ||||||    
T  2939878 tttgcggtgtggtttgattcaattttaaggttaaaagtcgttcgaaccgcaagataaaaaagtatgcgatttagtttggttcagttgattttagaaataa 2939977  T
Q  134 aat 136  Q
    |||    
T  2939978 aat 2939980  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 21068994 - 21069108
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaat 131  Q
    |||||||||||  |||| ||||| |||||||| |||||||||| ||||| |||| |||||||| |||||  ||| ||| |||| | ||||||||||||||    
T  21068994 tgtttgcggtgcggtttagttcgattttgaggttaaaagtcattcgaactgcaaaataaataaatatgcagtttggttcggtttggttgacttttaaaat 21069093  T
Q  132 aaaatttgaaccaaa 146  Q
     ||||| ||||||||    
T  21069094 taaattcgaaccaaa 21069108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 19753638 - 19753541
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||| |||||||||||||  ||||| |||||| ||| | || ||||||||| |||  ||||||||| |||||||||||||||||||| ||||||||    
T  19753638 ggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaattcgaaccaaa 19753541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 19786168 - 19786265
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||| |||||||||||||  ||||| |||||| ||| | || ||||||||| |||  ||||||||| |||||||||||||||||||| ||||||||    
T  19786168 ggttcgattttgaggctaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaattcgaaccaaa 19786265  T

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Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 32136638 - 32136739
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||||| |||  |||||||||||||||||   ||||||||| || |||| | ||||||| ||| ||||||||| ||||||||||||||| ||||||    
T  32136638 gggtgtttgcagtgcggtttggttcggttttgaacataaaagtcacccaaacctcgagataaaaaagcatgcgatttggtttggttcgattgatttttaa 32136737  T
Q  129 aa 130  Q
    ||    
T  32136738 aa 32136739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 45983329 - 45983433
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||| |||| |||||||||||| ||||| | ||||||| ||| ||||||||||||||| ||  ||||| ||| ||||| |||| |||||||| ||    
T  45983329 gggtgtttgtggtgcagtttggttcggctttgaagataaaagttatctgaaccgcaagataaaaaatcatgcggtttggtttgattcggttgactttaaa 45983428  T
Q  129 aataa 133  Q
    |||||    
T  45983429 aataa 45983433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 31301241 - 31301331
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt 119  Q
    |||||||||||||| |||||||||  ||||||||  |||||||||||| |||||| ||||||| ||  ||||| ||| |||||||||||||    
T  31301241 gggtgtttgcggtgcagtttggtttagttttgagcataaaagtcatccaaaccgcgagataaaaaaacatgcggtttggtttggttcgatt 31301331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 1566196 - 1566111
Alignment:
Q  65 taaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaa 150  Q
    ||||||||||| |||||| |||||||||||||||||| ||||||||| |||| || | ||||||| ||||||  ||| ||||||||    
T  1566196 taaaagtcatctgaaccgtaagataaataagtatgcggtttagtttgattcggttaatttttaaattaaaatccgaatcaaatcaa 1566111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 40900220 - 40900119
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||||||  |||||||||||| ||| || ||||||| ||| ||||| ||| |||||||||  |||| ||||||    
T  40900220 gggtgttcgcggtgcggtttggttcggttttgagcataaaagtcatccaaactgcgagataaaaaagcatgcggtttggtttggttcagttgatttttaa 40900121  T
Q  129 aa 130  Q
    ||    
T  40900120 aa 40900119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 8484638 - 8484728
Alignment:
Q  56 ttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||||| |||||||| | | ||||||||||||||||| |||||| |||   ||| |||| ||||||||||||||||||  |||||||||    
T  8484638 ttttgaggttaaaagtctttccaaccgcaagataaataactatgcggtttgtgttgattcggttgacttttaaaataaaacatgaaccaaa 8484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 5262085 - 5262000
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||| ||||||||||||  |||||||||||| |||||||||||||| ||| ||||| ||| |||| ||||  |||| ||||||||    
T  5262085 gtttgattcggttttgagcataaaagtcatccaaaccgcaagataaaaaagcatgcggtttggtttagttcagttgatttttaaaa 5262000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 32223456 - 32223339
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||| ||||||||||||| |||||||||||| || || |||||||| ||| ||||| ||| | || ||||  || ||||||||    
T  32223456 gggtgttcgcggtgcggtttgattcggttttgaggttaaaagtcatccaaatcgaaagataaaaaagcatgcggtttggatttgttccgtttacttttaa 32223357  T
Q  129 aataaaatttgaaccaaa 146  Q
    || | ||| |||||||||    
T  32223356 aacacaatctgaaccaaa 32223339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 15723843 - 15723931
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataa 133  Q
    ||||| ||| ||||||| | ||||| ||||| |||||| || ||||| ||||||||  |||||||||||||| |||||||| |||||||    
T  15723843 gtttgattcagttttgaaggtaaaaatcatctgaaccgtaatataaaaaagtatgcagtttagtttggttcggttgactttaaaaataa 15723931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 29232709 - 29232841
Alignment:
Q  40 gtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttg 139  Q
    ||||||||||||||| |||| ||| ||||||| ||   |||   || ||| |||||| |||| ||| |||| ||||| |||||||||||||||||||  |    
T  29232709 gtgtagtttggttcgattttaaggttaaaagttatataaactataatatatataagtttgcggtttggtttagttcggttgacttttaaaataaaatccg 29232808  T
Q  140 aaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||| ||| |||||  ||||| ||||||||||||    
T  29232809 aactaaaccaatgcgatttggattggatcggtt 29232841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 51394664 - 51394736
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcg 101  Q
    ||||||| |||||| |||||||||| ||||||||  |||||||||||| |||||| ||||||| ||| |||||    
T  51394664 gggtgttcgcggtgcagtttggttcagttttgagcataaaagtcatccaaaccgcgagataaaaaagcatgcg 51394736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 28147727 - 28147842
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||| ||||||  ||||| || |||||||||| ||||  ||||| |||||| |||||||||||||| ||| ||| |||| |||   |||||||||||||    
T  28147727 gtgttcgcggtgccgtttgatttggttttgaggttaaacatcatctgaaccgtaagataaataagtaggcggtttggtttagttttgttgacttttaaaa 28147826  T
Q  131 taaaatttgaaccaaa 146  Q
    || ||| ||| |||||    
T  28147827 tataatctgatccaaa 28147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 41325040 - 41325143
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    ||||| || ||| ||| ||||||||||||||| ||  | ||||||||  ||||||| ||||||||||||||||| |||  |||  |||| ||||||||||    
T  41325040 agggtattggcgatgtggtttggttcggttttaagattgaaagtcatttgaaccgcgagataaataagtatgcggtttgatttaattcggttgactttta 41325139  T
Q  128 aaat 131  Q
    ||||    
T  41325140 aaat 41325143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 42198737 - 42198846
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||| |||||| ||||||||||| |||||||| |||| ||||||  |||||||||||||| ||  ||||| ||| |||| |     |||||||||||||    
T  42198737 gtgttcgcggtgcagtttggttcgattttgaggttaaatgtcatcataaccgcaagataaa-aaacatgcggttttgttttg-----ttgacttttaaaa 42198830  T
Q  131 taaaatttgaaccaaa 146  Q
    |||||| |||||||||    
T  42198831 taaaatctgaaccaaa 42198846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 43630525 - 43630624
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||| ||||||  |||||||||| |||||||  |||||||||||| |||||  ||||||| || |||||| ||| |||||||| | |||| ||||||||    
T  43630525 gtgttcgcggtgcggtttggttcgattttgagtataaaagtcatccaaaccgtgagataaaaaaatatgcggtttggtttggtttggttgatttttaaaa 43630624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 10218624 - 10218706
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttg 111  Q
    ||||||||||||||   |||||||||||||||||  |||||||||||  |||| ||||||||| ||| ||||| ||| |||||    
T  10218624 gggtgtttgcggtgcgttttggttcggttttgagcataaaagtcatctaaacctcaagataaaaaagcatgcggtttggtttg 10218706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 18536782 - 18536680
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgactttta 127  Q
    |||||||| || ||| ||||| |||||||||||| ||||||| |||||| |||| ||||||||| ||| |  |  ||| | |||||||| ||||||||||    
T  18536782 agggtgttcgcagtgcagttttgttcggttttgaagctaaaattcatccaaaccacaagataaaaaagcacacagtttgggttggttcggttgactttta 18536683  T
Q  128 aaa 130  Q
    |||    
T  18536682 aaa 18536680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 6333262 - 6333347
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggtt 114  Q
    ||||||| ||||||  |||||||||| |||||||   ||||||||||| |||||| ||||||| ||| ||||| ||| ||||||||    
T  6333262 gggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcgagataaaaaagcatgcggtttggtttggtt 6333347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 29335250 - 29335189
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    ||||||||||||| ||||||||||| |||||||| |||||||| ||  || |||||||||||    
T  29335250 ggtgtttgcggtgcagtttggttcgattttgaggttaaaagtcttcttaatcgcaagataaa 29335189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 41260219 - 41260284
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataag 95  Q
    |||||||| ||||  ||||||||||||||||||  ||||| |||||| |||||| |||||||||||    
T  41260219 ggtgtttgtggtgcggtttggttcggttttgagcataaaaatcatcctaaccgcgagataaataag 41260284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 18396289 - 18396381
Alignment:
Q  44 agtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||||||||  ||||||  |||||||| ||  ||||||||||||||| |  |||||| ||| |||||||||  ||||||||||| |||||||    
T  18396289 agtttggttcaattttgattctaaaagttatttgaaccgcaagataaaaagatatgcggtttggtttggttcagttgacttttaagataaaat 18396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Original strand, 27743165 - 27743237
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcg 101  Q
    |||||||||  ||||||||||||||| |||||||| ||||||||||  ||| |||  |||||||| |||||||    
T  27743165 gggtgtttggagtgtagtttggttcgattttgaggttaaaagtcatttgaatcgcttgataaatatgtatgcg 27743237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 46471426 - 46471493
Alignment:
Q  70 gtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatt 137  Q
    |||||| |||||  |||||||| || ||| || ||||||||| |||| ||||||||||||||||||||    
T  46471426 gtcatctgaaccataagataaaaaaatatacggtttagtttgattcggttgacttttaaaataaaatt 46471493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 7785123 - 7785081
Alignment:
Q  39 ggtgtagtttggttcggttttgaggctaaaagtcatccgaacc 81  Q
    |||||||||||||| |||||||||| ||||||||||| |||||    
T  7785123 ggtgtagtttggtttggttttgaggttaaaagtcatctgaacc 7785081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 52096142 - 52096064
Alignment:
Q  57 tttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaa 135  Q
    ||||||||||||||| |||| | ||  |||||||| || ||| ||||||||||||||| | ||| || |||||||||||    
T  52096142 tttgaggctaaaagttatccaatccataagataaaaaattatacgatttagtttggtttggttgcctattaaaataaaa 52096064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 11031765 - 11031661
Alignment:
Q  36 tgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaa 135  Q
    |||||||  |||||| | |||||||||||||||||||| || || |||| |||||| ||| |||     | |||||||| | ||||||||||||||||||    
T  11031765 tgcggtgcggtttgggttggttttgaggctaaaagtcagccaaatcgcatgataaaaaagcatg-----tggtttggtttggttgacttttaaaataaaa 11031671  T
Q  136 tttgaaccaa 145  Q
    | | ||||||    
T  11031670 tcttaaccaa 11031661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 29636719 - 29636820
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  29636719 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 29636818  T
Q  129 aa 130  Q
    ||    
T  29636819 aa 29636820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 36077518 - 36077619
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||| | |||||| ||| ||| ||||||||| ||| |||||||||| |||| ||||||    
T  36077518 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcattcaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatttttaa 36077617  T
Q  129 aa 130  Q
    ||    
T  36077618 aa 36077619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 48255679 - 48255759
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagat--aaataagtatgcgatttagtttggttcgattgact 123  Q
    ||||||||| ||||| ||||||||||| ||| ||||| ||||||  ||| ||  ||||| ||| |||||||||||||||||    
T  48255679 gtttggttcagttttaaggctaaaagttatctgaaccacaagataaaaaaaaacatgcggtttggtttggttcgattgact 48255759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 152
Target Start/End: Original strand, 49640823 - 49640916
Alignment:
Q  60 gaggctaaaagtcatccgaaccgcaagataaata-agtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaatg 152  Q
    ||||| |||||| |||||||||| |||| ||| | | |||||| |||  |||| || | |||||||||||||||||||| |||||||| |||||    
T  49640823 gaggcgaaaagttatccgaaccgtaagacaaaaataatatgcggtttgatttgatttggttgacttttaaaataaaattcgaaccaaaccaatg 49640916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 50571095 - 50570994
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  50571095 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 50570996  T
Q  129 aa 130  Q
    ||    
T  50570995 aa 50570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 12916372 - 12916420
Alignment:
Q  103 tttagtttggttcgattgacttttaaaataaaatttgaaccaaatcaat 151  Q
    ||||||||| |||| ||||||||||||||||||||  ||| ||||||||    
T  12916372 tttagtttgattcggttgacttttaaaataaaattcaaactaaatcaat 12916420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 27572182 - 27572065
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |||| ||| ||||| ||| |||||||||| ||| |||||||    
T  27572182 gggtgtttgcggtgcggtttggttcggttttgaggttaaaagtcatccgaaccgcaaggtaaaaaagcatgcggtttggtttggttcggttgtcttttaa 27572083  T
Q  129 aataaaatttgaaccaaa 146  Q
    ||||||||  ||||||||    
T  27572082 aataaaatccgaaccaaa 27572065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 40884277 - 40884412
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||||| ||||| || ||||||| |||||||| |||||||||| |||||||||||||||| ||||||||  ||| |||| ||||| | ||||||||||    
T  40884277 ggtgtttgtggtgtggtgtggttcgattttgaggttaaaagtcattcgaaccgcaagataaaaaagtatgctgtttggtttagttcggtcgacttttaaa 40884376  T
Q  130 ataaaatttgaaccaaatcaatgtaatttgaattgg 165  Q
    ||||||||| ||||||| ||||| | |||| |||||    
T  40884377 ataaaatttaaaccaaaccaatgcagtttggattgg 40884412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 36567667 - 36567810
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||| || |||||||||| ||||||| |||||||||| ||||| |||||||||||| ||| ||| |||| | |||||||||||    
T  36567667 gggtgttcgcggtgccgtttgatttggttttgaggttaaaagttatccgaaccgtaagatgaataagtatgcggtttggttcggtttggttgacttttaa 36567766  T
Q  129 aataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    |||||||||  ||||||| |||||   |||| ||||||||||||    
T  36567767 aataaaattcaaaccaaaccaatgcggtttggattggatcggtt 36567810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 22747714 - 22747597
Alignment:
Q  24 cgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgact 123  Q
    |||| ||||||| |||||   |||| ||||||||||||||||||| ||||||||||||||||||||||     ||||| |||  ||||||||||||||||    
T  22747714 cgtaggggtgttcgcggtacggtttagttcggttttgaggctaaa-gtcatccgaaccgcaagataaaagtacatgcggtttgatttggttcgattgact 22747616  T
Q  124 tttaaaataaaatttgaac 142  Q
    |||||||||||||||||||    
T  22747615 tttaaaataaaatttgaac 22747597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 40692443 - 40692548
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    ||||||||||||   |||| |||||||||||||||| ||||||| | ||| |||||||||| ||| ||||||||| |||||||||| |||||||||||||    
T  40692443 gtgtttgcggtgcgatttgattcggttttgaggctagaagtcattcaaactgcaagataaa-aagcatgcgatttggtttggttcggttgacttttaaaa 40692541  T
Q  131 taaaatt 137  Q
    |||||||    
T  40692542 taaaatt 40692548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 17085374 - 17085273
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  ||||||||| ||||||||  |||||||||||| |||| | ||||||| ||| |||||||||||||||||||| |||| ||||||    
T  17085374 gggtgtttgcggtgcggtttggttcagttttgagcataaaagtcatccaaaccacgagataaaaaagcatgcgatttagtttggttcggttgatttttaa 17085275  T
Q  129 aa 130  Q
    ||    
T  17085274 aa 17085273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 10090267 - 10090323
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcg 101  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10090267 gtttggttcggttttgaggctaaaagtcatcagaaccgcaagataaataagtatgcg 10090323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 25495046 - 25495137
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||  ||| ||||  |||| |||| ||||||||||||||    
T  25495046 gtttggttcggttttgaggctaaaagtcatctaaaccgcaacataaataagtatgcagtttggtttttttcggttgatttttaaaataaaat 25495137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 35240967 - 35240844
Alignment:
Q  23 acgtaagggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgac 122  Q
    ||||| |||| ||||| |||  |||||||||| |||||||||||||| |||||||||||| ||| | || ||||||||| |||  ||||||||| |||||    
T  35240967 acgtatgggtatttgcagtgcggtttggttcgattttgaggctaaaattcatccgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgac 35240868  T
Q  123 ttttaaaataaaatttgaaccaaa 146  Q
    ||| ||||||||||  ||||||||    
T  35240867 tttaaaaataaaatccgaaccaaa 35240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 333413 - 333313
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||||||||||  |||||||||| |||||||  |||||||||||| |||||| ||||| | ||| |||||| || ||||||||||||||| |||||||    
T  333413 ggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagatagaaaagcatgcgaattggtttggttcgattgatttttaaa 333314  T
Q  130 a 130  Q
    |    
T  333313 a 333313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 172
Target Start/End: Original strand, 2588935 - 2589063
Alignment:
Q  44 agtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacc 143  Q
    ||||||||||| ||||||| |||||||||||  |||||| |||||||| ||  ||||| ||| |||||||| | ||||||||||||||||| |  |||||    
T  2588935 agtttggttcgattttgagactaaaagtcatttgaaccgtaagataaaaaaacatgcggtttggtttggtttggttgacttttaaaataaattcagaacc 2589034  T
Q  144 aaatcaatgtaatttgaattggatcggtt 172  Q
    ||||| |||   ||||  |||||||||||    
T  2589035 aaatcgatgcggtttgggttggatcggtt 2589063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 12379151 - 12379078
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataagtatgcg 101  Q
    ||||||| |||||| ||||||||||| ||||||| |||||| |||| ||||||||||||| |||||||||||||    
T  12379151 gggtgttcgcggtgcagtttggttcgattttgagactaaaaatcattcgaaccgcaagataaaataagtatgcg 12379078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 20192100 - 20191995
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    |||| |||||||||||| | ||||||||||| |||| ||||||| || ||  ||| |||||  ||||||||| |||||||||||||||||||  |||| |    
T  20192100 gtttagttcggttttgatgttaaaagtcatctgaactgcaagattaaaaaacatgtgatttgatttggttcggttgacttttaaaataaaatccgaacta 20192001  T
Q  145 aatcaa 150  Q
    ||||||    
T  20192000 aatcaa 20191995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 32244493 - 32244392
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaatc 148  Q
    |||||| |||||||| ||||  ||||| |||||| ||| | || ||||||||| |||  ||||||||| |||||||||||||||||||  ||||||||||    
T  32244493 ggttcgattttgaggttaaatttcatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaatc 32244394  T
Q  149 aa 150  Q
    ||    
T  32244393 aa 32244392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 36760137 - 36760202
Alignment:
Q  107 gtttggttcgattgacttttaaaataaaatttgaaccaaatcaatgtaatttgaattggatcggtt 172  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||  ||||| |||||||||||    
T  36760137 gtttggttcgattgacttttaaaataaaatccgaaccaaaccaatgtggtttgagttggatcggtt 36760202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 38433643 - 38433744
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||||||  ||||| ||||| |||||||||||||  |||||||||| | |||||| ||||||| ||  ||||| |||||||||||||| |||| ||||||    
T  38433643 gggtgttcacggtgcagtttagttcggttttgagcataaaagtcattcaaaccgcgagataaaaaatcatgcggtttagtttggttcggttgatttttaa 38433742  T
Q  129 aa 130  Q
    ||    
T  38433743 aa 38433744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 6718533 - 6718629
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||| | ||| |||| ||||||||| |||||||||| |||||| |||  |||| ||| ||||| |||| |||||||||||| ||||||||    
T  6718533 tgtttgcggtgcaatttagttcagttttgaggttaaaagtcattcgaaccacaacgtaaaaaagcatgcggtttaatttggttcgattaacttttaa 6718629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 32721807 - 32721709
Alignment:
Q  33 gtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaata 132  Q
    |||||||||| | ||| ||| | |||||||||||||||| ||  ||||||||||||||||| | ||||| |||||||| ||| |||| ||||||||||||    
T  32721807 gtttgcggtgcaatttagtttgattttgaggctaaaagttatt-gaaccgcaagataaatatgcatgcggtttagtttagtttgattaacttttaaaata 32721709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 34087381 - 34087472
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    ||||| ||| ||||||||| ||||| ||||| |||| ||||||||||||||||| | |||| |||| ||||  ||||||||||| |||||||    
T  34087381 gtttgattcagttttgaggttaaaaatcatctgaactgcaagataaataagtatacaatttggtttagttcagttgacttttaagataaaat 34087472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 146
Target Start/End: Original strand, 41454831 - 41454926
Alignment:
Q  56 ttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgatt-----gacttttaaaataaaatttgaaccaaa 146  Q
    |||||| ||||||||||||  ||| | ||||||||||||||||||| ||| |||||||||| ||     ||||||||||||||||| |||||||||    
T  41454831 ttttgaagctaaaagtcatttgaaacacaagataaataagtatgcggtttggtttggttcggttcggttgacttttaaaataaaatctgaaccaaa 41454926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 15068406 - 15068507
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||| ||  ||| | |||||| |||||| ||| ||| ||| ||||||||| |||||||||| |||| ||||||    
T  15068406 gggtgttcgcggtgcggtttggttcggttttaagcataataatcatccaaaccgcgagagaaaaaagcatgcgatttggtttggttcggttgatttttaa 15068505  T
Q  129 aa 130  Q
    ||    
T  15068506 aa 15068507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 17132207 - 17132110
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||| |||||||||||||  | ||| |||||| ||| | || ||||||||| |||  ||||||||| |||||||||||||||||||  ||||||||    
T  17132207 ggttcgattttgaggctaaattttatctgaaccgtaagctgaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 17132110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 42544607 - 42544703
Alignment:
Q  32 tgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||| ||||||| ||||| ||||||||||||   ||||||||||  |||||| ||||||| ||| ||||| ||| |||||||||| |||| ||||||    
T  42544607 tgttcgcggtgtggtttgcttcggttttgagcaaaaaagtcatctaaaccgcgagataaaaaagcatgcggtttggtttggttcggttgatttttaa 42544703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 8408936 - 8409037
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||||||||| ||| |||||||||| |||| ||||||    
T  8408936 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagtatgcggtttggtttggttcggttgatttttaa 8409035  T
Q  129 aa 130  Q
    ||    
T  8409036 aa 8409037  T

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Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 30265928 - 30265827
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||| |||||||||  ||||| |||||  |||||||||||||| ||  ||||  ||| |||||||||| |||| ||||||    
T  30265928 gggtgttcgcggtgcggtttggtttggttttgagcataaaaatcatctaaaccgcaagataaaaaaacatgcagtttggtttggttcggttgatttttaa 30265829  T
Q  129 aa 130  Q
    ||    
T  30265828 aa 30265827  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 34881453 - 34881348
Alignment:
Q  37 gcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaat 136  Q
    |||||| |||||  ||| |||||||||||||||||||||| |||| | ||||||| ||| |  || ||| |||| ||||  |||||||||||||| ||||    
T  34881453 gcggtgcagtttaattcagttttgaggctaaaagtcatccaaaccacgagataaaaaagcaaacggtttggtttagttcagttgacttttaaaattaaat 34881354  T
Q  137 ttgaac 142  Q
     |||||    
T  34881353 ctgaac 34881348  T

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Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 2227020 - 2226920
Alignment:
Q  30 ggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    |||||| |||| || ||||||||||||||||||  |||||  ||||| |||||| ||||||| ||| | | | ||| |||||||||| |||| |||||||    
T  2227020 ggtgttcgcggagtggtttggttcggttttgagcataaaaaacatccaaaccgcgagataaaaaagaacgtggtttggtttggttcggttgatttttaaa 2226921  T
Q  130 a 130  Q
    |    
T  2226920 a 2226920  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 23780769 - 23780832
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||| ||||||  ||||||||||||||| ||  |||||||||||| |||||| |||||||    
T  23780769 agggtgttcgcggtgcggtttggttcggttttaagcataaaagtcatccaaaccgcgagataaa 23780832  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 23867722 - 23867785
Alignment:
Q  28 agggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||| ||||||  ||||||||||||||| ||  |||||||||||| |||||| |||||||    
T  23867722 agggtgttcgcggtgcggtttggttcggttttaagcataaaagtcatccaaaccgcgagataaa 23867785  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 28225001 - 28224894
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||  ||| |||||||||| ||||||||| | || |||||||||||||| |||||  ||| ||||| |||| ||   ||||||    
T  28225001 gggtgttcgcggtgcggtttaattcagttttgaggcaaaaagtcatgcaaaacgcaagataaataaatatgcagtttggtttgtttcggttcttttttaa 28224902  T
Q  129 aataaaat 136  Q
    ||||||||    
T  28224901 aataaaat 28224894  T

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Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 691671 - 691601
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagat-aaataagtatgcgatttagtttggtt 114  Q
    ||||| |||| |||||| | |||||||||| ||||||||||||| ||| ||| ||||||||||||| ||||    
T  691671 gtttgattcgattttgaaggtaaaagtcattcgaaccgcaagataaaaaaagcatgcgatttagttcggtt 691601  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 18432024 - 18432086
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||| ||||| |||||  ||||||||| ||| |||||||||||||||| | ||||||||    
T  18432024 gggtgttttcggtgcagtttacttcggtttttaggttaaaagtcatccgaactgtaagataaa 18432086  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 40331549 - 40331507
Alignment:
Q  107 gtttggttcgattgacttttaaaataaaatttgaaccaaatca 149  Q
    |||||||||| |||||||||||||||||||  |||||||||||    
T  40331549 gtttggttcggttgacttttaaaataaaatccgaaccaaatca 40331507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 4413857 - 4413926
Alignment:
Q  65 taaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaa 134  Q
    ||||||||||||||||  ||| ||||  ||||||| ||||| |||||| ||| |||||| ||||||||||    
T  4413857 taaaagtcatccgaacttcaaaataagaaagtatgtgatttggtttggctcggttgactattaaaataaa 4413926  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 11917351 - 11917452
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  11917351 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 11917450  T
Q  129 aa 130  Q
    ||    
T  11917451 aa 11917452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 27886553 - 27886452
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  ||||||||||||||  ||  ||| | |||||| |||||| ||| ||| ||| ||||| ||| |||||||||| |||| ||||||    
T  27886553 gggtgttcgcggtgcggtttggttcggtttcaagcataataatcatccaaaccgcgagagaaaaaagcatgcggtttggtttggttcggttgatttttaa 27886454  T
Q  129 aa 130  Q
    ||    
T  27886453 aa 27886452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 36177206 - 36177141
Alignment:
Q  65 taaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaa 130  Q
    |||||||||||| |||||| ||||||| | | ||||| ||| |||||||||| |||| ||||||||    
T  36177206 taaaagtcatccaaaccgcgagataaaaatgcatgcggtttggtttggttcggttgatttttaaaa 36177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 1681086 - 1681154
Alignment:
Q  47 ttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttc 115  Q
    ||||||||||||||||| ||||| |||||||||   ||||||||  || |||| | |||||||||||||    
T  1681086 ttggttcggttttgaggttaaaaatcatccgaattacaagataagaaattatgtggtttagtttggttc 1681154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 34969347 - 34969391
Alignment:
Q  106 agtttggttcgattgacttttaaaataaaatttgaaccaaatcaa 150  Q
    |||| |||||| ||||||||||||||||||||| |||| ||||||    
T  34969347 agttaggttcggttgacttttaaaataaaatttaaacctaatcaa 34969391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 25809 - 25915
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    |||| ||||||||| |||||||||||||||| ||| |||||||||||||||||| |||||||| ||  ||||  ||| |||||||||| |||||||||||    
T  25809 gggtatttgcggtgcagtttggttcggttttaaggttaaaagtcatccgaaccgtaagataaa-aaacatgcagtttggtttggttcggttgacttttaa 25907  T
Q  129 aataaaat 136  Q
    ||||||||    
T  25908 aataaaat 25915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 14470 - 14568
Alignment:
Q  31 gtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaa 129  Q
    ||||||||||||  ||||||||| ||||||| | ||||||||||||||||||||||||||| ||| ||||||||| |||||||||  |||||| |||||    
T  14470 gtgtttgcggtgcggtttggttcagttttgaagttaaaagtcatccgaaccgcaagataaaaaagcatgcgatttggtttggttcagttgactcttaaa 14568  T

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Target: scaffold0688 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0688
Description:

Target: scaffold0688; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 1120 - 1166
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1120 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0688; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 45 - 91
Target Start/End: Original strand, 7689 - 7735
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  7689 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaa 7735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 62365 - 62462
Alignment:
Q  49 ggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaaccaaa 146  Q
    |||||| |||||||||||||  ||||| |||||| ||| |||| ||||||||| |||  ||||||||| |||||||||||||||||||  ||||||||    
T  62365 ggttcgattttgaggctaaatttcatctgaaccgtaagctaaaaaagtatgcggtttgatttggttcggttgacttttaaaataaaatccgaaccaaa 62462  T

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Target: scaffold0013 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 128582 - 128683
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||||||||||  |||||||||| |||||||  |||||||||||| |||||||||||||| ||| ||| | ||| |||||||||  |||| ||||||    
T  128582 gggtgtttgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttctgttgatttttaa 128681  T
Q  129 aa 130  Q
    ||    
T  128682 aa 128683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 105975 - 106077
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||| |||||||   ||||||||||| |||||||||||||| ||| ||| | ||| |||||||||| |||| ||||||    
T  105975 gggtgttcgcggtgcggtttggttcgattttgagcaaaaaagtcatccaaaccgcaagataaaaaagcatgtggtttggtttggttcggttgatttttaa 106074  T
Q  129 aat 131  Q
    |||    
T  106075 aat 106077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 146
Target Start/End: Original strand, 5957 - 6058
Alignment:
Q  45 gtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaaaataaaatttgaacca 144  Q
    ||||| |||||||||||| |||||||| ||| |||||||||  |||| || |||||   |||||||| ||| ||||| ||||||||||||||| ||||||    
T  5957 gtttgtttcggttttgagactaaaagtgatctgaaccgcaacttaaaaaaatatgcaggttagtttgtttcaattgatttttaaaataaaattcgaacca 6056  T
Q  145 aa 146  Q
    ||    
T  6057 aa 6058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 130
Target Start/End: Complemental strand, 69677 - 69576
Alignment:
Q  29 gggtgtttgcggtgtagtttggttcggttttgaggctaaaagtcatccgaaccgcaagataaataagtatgcgatttagtttggttcgattgacttttaa 128  Q
    ||||||| ||||||  |||||||||| |||||||  |||||||||||| |||||| ||||||| ||| ||| | ||| |||||||||| |||| ||||||    
T  69677 gggtgttcgcggtgcggtttggttcgattttgagcataaaagtcatccaaaccgcgagataaaaaagcatgtggtttggtttggttcggttgatttttaa 69578  T
Q  129 aa 130  Q
    ||    
T  69577 aa 69576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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