View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11831_low_23 (Length: 280)
Name: NF11831_low_23
Description: NF11831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11831_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 265
Target Start/End: Original strand, 37099110 - 37099357
Alignment:
| Q |
17 |
ttttacttaatttctccgtaggaagtaatctatcattttcaaaccttttaaacctagttctaacacctttgatccatgttatacacgcaatttcaaatta |
116 |
Q |
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| T |
37099110 |
ttttacttaatttctccataggaagtaatctatcattttcaaaccttttaa-cctagttctaacacctttgatccatgaaatacacgcaatttcaaatta |
37099208 |
T |
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| Q |
117 |
aatgttaatttttccctttaaaactctaatcacactatttacttatgatataaaaagggttatttcactaaatcttgatcaaactatccttactccacgg |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
37099209 |
aatgttaatttttccctttaaaactctaatcacactatttacttatgatataaaaagggttatttcactaaatcttgatcaaactatacttactccacgg |
37099308 |
T |
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| Q |
217 |
ccaactctggattaccagggccccctcccctagtaatcagagggttaat |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37099309 |
ccaactctggattaccagggccccctcccctagtaatcagagggttaat |
37099357 |
T |
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