View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11831_low_3 (Length: 711)
Name: NF11831_low_3
Description: NF11831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11831_low_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 575; Significance: 0; HSPs: 24)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 575; E-Value: 0
Query Start/End: Original strand, 36 - 693
Target Start/End: Complemental strand, 26205282 - 26204625
Alignment:
| Q |
36 |
ttgaaacggttttgttttagtggaatagaaatgtgttttggtataaatgctaccaagttagtaataaacaccaaaaagagcgttactaatgtaatactta |
135 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26205282 |
ttgaaacggttttgttttagtggaatagaaatgtgttttggtatacatgctaccaagttagtaataaacactaaaaagagcgttactaatgtaatactta |
26205183 |
T |
|
| Q |
136 |
ttaaaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgtt-actaaaacatgtaaatgtattagtgatcatgttac |
234 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26205182 |
ttaaaaaatgttagagaaatcttcatattagtaactataaactaaatgttgcaaggtgaatgtttactaaaacatgtaaatgtattagtgatcatgttac |
26205083 |
T |
|
| Q |
235 |
aaaaccaaaaaacttttataaaatcacaccagctgcaactcctagagcaataatatttaaattaatgtcatcaactcaacctcaaattcaattatctaat |
334 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26205082 |
aaaaccaaaaaacttttataaaatcacaccagctgcaactcgtagagcaataatatt-aaattaatgtcatcaactcatcctcaaattcaattatctaat |
26204984 |
T |
|
| Q |
335 |
ctggttttttcaagttctctagcaatcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttct |
434 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26204983 |
ctggttttttcaagttctctagcaatcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttct |
26204884 |
T |
|
| Q |
435 |
tggcagcatcaccaagcttctttgctctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttct |
534 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| | | |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26204883 |
tggcagcatcaccaagcttctttgctctcatcctcatttctttgctcacttggccatttcccatcaatatctcaacagccttcactatctcctcccttct |
26204784 |
T |
|
| Q |
535 |
caccactacctcttcaccaatgctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaa |
634 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
26204783 |
caccactacctcttcaccaatgctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagcagcttctcattgtaa |
26204684 |
T |
|
| Q |
635 |
aattgttcagcaaacattggccatgttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26204683 |
aattgttcagcaaatattggccatgttatcattggcaaaccagaattcaagctttcaag |
26204625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 228 - 693
Target Start/End: Complemental strand, 26224726 - 26224262
Alignment:
| Q |
228 |
atgttacaaaaccaaaaaacttttataaaatcacaccagctgcaactcctagagcaataatatttaaattaatgtcatcaactcaacctcaaattcaatt |
327 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
26224726 |
atgttgcaaaaccaaaaaacttttataaaatcacaccagctgcaactcctagagcaataatatt-aaattaatgtcatcaactcatcctcaaattcaatt |
26224628 |
T |
|
| Q |
328 |
atctaatctggttttttcaagttctctagcaatcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctata |
427 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26224627 |
atctaatctggttttttcaagttctctagcaatcttcaatgattttagctcatcaatcaattgaatcaagttgttgtaagaatctccaccttcctctata |
26224528 |
T |
|
| Q |
428 |
gtcttcttggcagcatcaccaagcttctttgctctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcct |
527 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26224527 |
gtcttctttgcagcatcaccaagcttctttgctctcatcctcatcacttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcct |
26224428 |
T |
|
| Q |
528 |
cccttctcaccactacctcttcaccaatgctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctc |
627 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26224427 |
cccttctcaccactacctcttcaccaatgctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagcagcttctc |
26224328 |
T |
|
| Q |
628 |
attgtaaaattgttcagcaaacattggccatgttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26224327 |
attgtaaaattgttcagcaaatattggccatgttatcattggcaaaccagaattcaagctttcaag |
26224262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 360 - 693
Target Start/End: Complemental strand, 26278769 - 26278436
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
26278769 |
tcttcaatgatttcagctcatcaatcaattgaatcaagttgttgtaagagtgtccaccttcctctatagtcctcttggcagcatcaccaagtttctttgc |
26278670 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| | | |||||||||| ||||| ||||||||||||||||| ||||||||||||| | ||||| ||| |||| || |
|
|
| T |
26278669 |
tctcatcctcatttctttgctctcttggctaattcccatcaaaatctctacagccttcactatctcttcccttctcaccatttcctctacactaatgtta |
26278570 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
||| |||| ||| ||||||| |||||| | ||| || |||||||||||||||||||| | ||||||||||||||||| || ||||||| |||||| | |
|
|
| T |
26278569 |
gtccataacttgtttacttttgctccaactgggacccctatcttcaaaacatcaacaagcaacttctcattgtaaaattcctcggcaaacactggccacg |
26278470 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
| |||||||||||||||| ||| | ||||||||| |
|
|
| T |
26278469 |
tgatcattggcaaaccagcatttacgctttcaag |
26278436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 360 - 690
Target Start/End: Complemental strand, 26156264 - 26155931
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
26156264 |
tcttcaatgatttcagatcatcaatcaactgaatcaagttgttgtaagaatctccaccttcttctatagtcctcttggcagcatcaccaagtttctttgc |
26156165 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttc---accaatg |
556 |
Q |
| |
|
||||| |||||| ||||| | |||||| ||||||||||||| ||||| ||||||||| ||||||| ||||| |||||||||| ||||| || | || |
|
|
| T |
26156164 |
tctcaccctcattgctttgctctcttggtcacttcccatcaaaatctctacagccttcgctatctcttccctcttcaccactacgtcttcactactagtg |
26156065 |
T |
|
| Q |
557 |
ctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggcc |
656 |
Q |
| |
|
||| ||| |||| || |||||| |||||| | ||| | |||||||||||||||||||| | ||| |||||||||||||| ||| |||||||||||| |
|
|
| T |
26156064 |
ctagtccataacttattttcttttgctccaactgggaccgctatcttcaaaacatcaacaagcaacttttcattgtaaaattgatcaccaaacattggcc |
26155965 |
T |
|
| Q |
657 |
atgttatcattggcaaaccagaattcaagctttc |
690 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
26155964 |
atgtaatcattggcaaaccagaattcaagctttc |
26155931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 360 - 690
Target Start/End: Original strand, 19102621 - 19102951
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||| ||| | |||||| |||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
19102621 |
tcttcaatgatttcagctcatcaatcaacagaatcaagttgttgtgagagtgtccaccctcctctatagtcctctttgcagcatcaccaagcttctttgc |
19102720 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| |||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||| | |||||| | |||| |
|
|
| T |
19102721 |
tctcatcctcatttctttgctctcttggccacttcccatcaaaatctccacagccttcactatctctccccttttcaccactatcccttcactagggcta |
19102820 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
||| |||| ||| ||||||| ||| || |||| || |||||||||||||| || || | ||| ||||||||||| || |||||||| |||||||||| |
|
|
| T |
19102821 |
ttccataacttgtttacttttgctcctactccgacccctatcttcaaaacatcgacgagcaacttttcattgtaaaactgctcagcaaaaattggccatg |
19102920 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttc |
690 |
Q |
| |
|
| |||||||||||||| |||||||||||||| |
|
|
| T |
19102921 |
tgatcattggcaaacccgaattcaagctttc |
19102951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 360 - 690
Target Start/End: Complemental strand, 26298521 - 26298191
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| || | ||| |||||||| |
|
|
| T |
26298521 |
tcttcaatgatttcagctcatcaatcaattgaatcaagttgttgtaagaatctccaccttcttctatagtcctcttggcagcctcgctaagtttctttgc |
26298422 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| || ||||||||||| |||| |||| |||| ||||||| ||||||||||||||| |||| ||| |||| | |
|
|
| T |
26298421 |
tctcatcctcatttctttgctctcttggccgcttcccatcaaaatcttcacagtcttctctatctcttcccttctcaccactttctctacactaatgtca |
26298322 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
||||| |||| ||| |||||| ||| || | ||| || ||||| |||||||||||||| | |||||||||||||||||| |||||||| || ||||||| |
|
|
| T |
26298321 |
agccataacttgttttcttttgctccgactgggacccctatctttaaaacatcaacaagcaacttctcattgtaaaattgctcagcaaaaataggccatg |
26298222 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttc |
690 |
Q |
| |
|
| |||||||||||||||| |||||||||||| |
|
|
| T |
26298221 |
tgatcattggcaaaccagcattcaagctttc |
26298191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 360 - 693
Target Start/End: Complemental strand, 26192338 - 26192005
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
|||||| |||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||| |||||||| |
|
|
| T |
26192338 |
tcttcagtgatttcagctcatcaatgaactgaatcaagttgttgtatgaatgtccaccttcctctatagtcctcttggaagcatcaccaagtttctttgc |
26192239 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| |||||||||||||| |||||||||||||| | ||||| |||||||| |||| ||||| ||| ||| ||| |
|
|
| T |
26192238 |
tctcatcctcatttctttgctctcttgtccacttcccatcaaaatctcaacagcctttgcaatctcttcccttctaaccatcgcctctacacaaatacta |
26192139 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
||| ||| ||| |||||| |||||| ||| || |||||||||||||||||||| | |||||||||||||||||| || |||||||||||||| | |
|
|
| T |
26192138 |
tcccatgacttgttttcttttgctccaactcggacccctatcttcaaaacatcaacaagcaacttctcattgtaaaattgctcggcaaacattggccacg |
26192039 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |
|
|
| T |
26192038 |
cgatcattggcaaaccagcattcaagctttcaag |
26192005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 360 - 693
Target Start/End: Complemental strand, 26243473 - 26243140
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
26243473 |
tcttcaacgatttcagctcatcaatcaactgaatcaagttgttgtaagaatctccaccctcctctatagtccttttggcagcatcaccaagtttctttgc |
26243374 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||| | | ||| | |||| | |
|
|
| T |
26243373 |
tctcatcctcatttctttgctctcttggccacttcccatcaaaatctcaacagcctttgtaatctcttcccttctcaccatttcatctactgtaatgttc |
26243274 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
| ||| |||| ||| ||||||| ||| | | ||| || ||||| |||||||||||||| | |||||||||||||||||| |||| | ||| |||||| | |
|
|
| T |
26243273 |
atccagaacttgtttacttttgctcctgctgggacccctatctttaaaacatcaacaagcaacttctcattgtaaaattgctcagaagacactggccacg |
26243174 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| |
|
|
| T |
26243173 |
taatcattggcaaaccagaattcaagctttcaag |
26243140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 360 - 693
Target Start/End: Complemental strand, 26251921 - 26251588
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||||| ||||| |||||||| |
|
|
| T |
26251921 |
tcttcaatgatttcagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatcgtccttttggctgcatcgccaagtttctttgc |
26251822 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| | |||||||||||| |||| ||||||| | | || || ||||||||||||||| ||||||||| ||| || |
|
|
| T |
26251821 |
tctcatcctcatttctttgctctcttggcaacttcccatcaaaatcttaacagccattgcaatttcttcccttctcaccacttcctcttcactaatatta |
26251722 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
| ||| |||| || |||||| ||| || | ||| || ||||||||||||||||| || | |||||||||||||||||| |||||||||| |||||| | |
|
|
| T |
26251721 |
atccataacttattttcttttgctcctactgggacccctatcttcaaaacatcaactagcaacttctcattgtaaaattgctcagcaaacactggccacg |
26251622 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
| |||||||||||||||| ||| ||||||||||| |
|
|
| T |
26251621 |
tgatcattggcaaaccagcatttaagctttcaag |
26251588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 360 - 693
Target Start/End: Complemental strand, 26180156 - 26179823
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| |||||||| |
|
|
| T |
26180156 |
tctttaatgatttcagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctcaatagtcctcttggaagcatcaccaagtttctttgc |
26180057 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||||||||||| |||| | |||||| ||||||||||||| |||| |||||||| ||||| || || |||||||||||| |||| || |||| || |
|
|
| T |
26180056 |
tctcatcctcatttctttgctctcttggtcacttcccatcaaaatctttacagccttaactatatcttctcttctcaccactttctctacattaatgtta |
26179957 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
| ||| || | ||| |||||| ||| || | ||| || |||||||||||||||||||| | |||||| ||||||||||| |||||||||| ||||| | |
|
|
| T |
26179956 |
atccataaattgttttcttttgctcctactgggacccctatcttcaaaacatcaacaagcaacttctcgttgtaaaattgctcagcaaacaccggccacg |
26179857 |
T |
|
| Q |
660 |
ttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
| |||||||||||||| || |||| |||||||| |
|
|
| T |
26179856 |
tgatcattggcaaacccgagttcacactttcaag |
26179823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 360 - 690
Target Start/End: Complemental strand, 26129643 - 26129310
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||| |
|
|
| T |
26129643 |
tcttcaatgatttcagctcatcaatcaattgaatcaagttgttgtaagaatctccaccttcctcaatagtcctcttggcagcctcaccaagcttttttgc |
26129544 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcac---caatg |
556 |
Q |
| |
|
|||||||||||| |||| | |||||| || ||||||||||| ||||| ||||||||| ||||||| |||||| |||||||||| |||| || || || |
|
|
| T |
26129543 |
tctcatcctcatttctttgctctcttggccgcttcccatcaaaatctctacagccttcgctatctcttcccttttcaccactacgtctttactttcagtg |
26129444 |
T |
|
| Q |
557 |
ctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggcc |
656 |
Q |
| |
|
||| || | || ||| |||||| ||| || | || || ||||||||||||||||| || | ||| |||||||||||||| || ||||| |||||| |
|
|
| T |
26129443 |
ctagtccgcatcttgttttcttttgctcctactgaaacccctatcttcaaaacatcaacgagcaacttttcattgtaaaattgatcgccaaaccttggcc |
26129344 |
T |
|
| Q |
657 |
atgttatcattggcaaaccagaattcaagctttc |
690 |
Q |
| |
|
|||| |||||||||||||||| ||| |||||||| |
|
|
| T |
26129343 |
atgtaatcattggcaaaccagcatttaagctttc |
26129310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 419 - 690
Target Start/End: Complemental strand, 26302823 - 26302552
Alignment:
| Q |
419 |
tcctctatagtcttcttggcagcatcaccaagcttctttgctctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttca |
518 |
Q |
| |
|
|||||||||||| |||||| |||| ||||||| || || ||| || ||||||| |||| | |||||| ||| |||||||||| |||||||| ||||| |
|
|
| T |
26302823 |
tcctctatagtcctcttggaagcagcaccaagatttttagctttcttcctcatttctttgctctcttggccatttcccatcaaaatctcaacggcctttg |
26302724 |
T |
|
| Q |
519 |
ctatctcctcccttctcaccactacctcttcaccaatgctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaag |
618 |
Q |
| |
|
| ||||| ||||||||||| | | ||||| ||| ||| ||| |||||||| |||| ||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
26302723 |
caatctcttcccttctcacaattgcctctacactaattctattccaaaactcgttctcttttgatccaacagaaactccaatcttcaaaacatcaacaag |
26302624 |
T |
|
| Q |
619 |
aagcttctcattgtaaaattgttcagcaaacattggccatgttatcattggcaaaccagaattcaagctttc |
690 |
Q |
| |
|
|| |||||| |||| |||||| |||||||| || |||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
26302623 |
aaacttctcgttgttaaattgctcagcaaaaatgggccatgtgatcattggcaaaccagcattcaagctttc |
26302552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 360 - 525
Target Start/End: Complemental strand, 26121388 - 26121223
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||||||||| |||||||| |||||||| |
|
|
| T |
26121388 |
tcttcaatgatttcagctcatcaatcaactgaatcaagttgttgtaagaatgtccacgttcctctataatcctcttggcagcctcaccaagtttctttgc |
26121289 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctc |
525 |
Q |
| |
|
||||||| |||| |||| | |||||| ||||||||||| || ||||| || |||||| ||||||| |
|
|
| T |
26121288 |
tctcatcatcatttctttgctctcttggccacttcccattaaaatctctacggccttcgctatctc |
26121223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 359 - 693
Target Start/End: Complemental strand, 26260946 - 26260612
Alignment:
| Q |
359 |
atcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttg |
458 |
Q |
| |
|
|||||||||||||| |||||||| || || || ||||| ||||||||||| |||||| |||||||| ||||||| || ||||||| ||| || ||| |
|
|
| T |
26260946 |
atcttcaatgatttaagctcatctataaattgcatcaaattgttgtaagaggttccaccctcctctatgctcttcttagctgcatcacaaagttttcttg |
26260847 |
T |
|
| Q |
459 |
ctctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgct |
558 |
Q |
| |
|
||||| ||||||| || | ||||| || |||||||||| | | ||||| || | ||||| ||||||||||||| | || ||| | | || |
|
|
| T |
26260846 |
ctctcctcctcatttctccactctcttctccttttcccatcaacactgccacagcttttgcaatctcttcccttctcaccaaagcatcgtcatcgacact |
26260747 |
T |
|
| Q |
559 |
aagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccat |
658 |
Q |
| |
|
| |||||||| |||||||||||||||||| | |||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
26260746 |
agcccaaaacttgttcacttttgatccaactgaaactccaatcttcaaaacatcaacaagcaacttctcattgtaaaattgctcagcaaacattggccat |
26260647 |
T |
|
| Q |
659 |
gttatcattggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
| |||||||||||||| || |||||||||||||| |
|
|
| T |
26260646 |
gcaatcattggcaaacccgagttcaagctttcaag |
26260612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 474 - 690
Target Start/End: Complemental strand, 26187207 - 26186991
Alignment:
| Q |
474 |
cttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgctaagccaaaactggtt |
573 |
Q |
| |
|
|||||| |||||| |||||||||||||| |||| |||||||| |||||||| ||||||||||||| | | ||| ||| |||| ||| | | |||| ||| |
|
|
| T |
26187207 |
cttttctctcttggccacttcccatcaaaatcttcacagccttaactatctcttcccttctcaccatttcatctacactaatgttaatctagaacttgtt |
26187108 |
T |
|
| Q |
574 |
cacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatgttatcattggcaaa |
673 |
Q |
| |
|
|||||| ||| || ||| || |||||||||||||||||||| | |||||||||||||||||| || || ||||||||||||| |||||||||||| |
|
|
| T |
26187107 |
ttcttttgctcctacttggacccctatcttcaaaacatcaacaagcaacttctcattgtaaaattgctcctcagacattggccatgtgatcattggcaaa |
26187008 |
T |
|
| Q |
674 |
ccagaattcaagctttc |
690 |
Q |
| |
|
|| || |||| |||||| |
|
|
| T |
26187007 |
cccgagttcacgctttc |
26186991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 360 - 676
Target Start/End: Complemental strand, 26208490 - 26208168
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
|||||||||||||||| ||||| || || || ||||||||||||||||| |||| || |||||| ||||||| ||||||| |||||| || ||| | |
|
|
| T |
26208490 |
tcttcaatgattttaggtcatctattaattgcatcaagttgttgtaagaggttccattctcatctatactcttctttgcagcataaccaagtttttttac |
26208391 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccact---acctct---tcacca |
553 |
Q |
| |
|
||| ||||||| ||| | | ||||| ||||||||||||| |||||||||||||| | ||||| |||||||| | ||| ||||| ||||| |
|
|
| T |
26208390 |
cctcctcctcattgctatgctctcttcttcacttcccatcaaaatctcaacagcctttgcaatctcttcccttctaattactgcaacctcaccctcaccc |
26208291 |
T |
|
| Q |
554 |
atgctaagccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattg |
653 |
Q |
| |
|
|| |||||| | |||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| |
|
|
| T |
26208290 |
tcattagaccaaaatttgttcacttttgatccaactgaaactccaatcttcaaaacatcaacaagcaatttctcattgtaaaattgctcagcaaacattg |
26208191 |
T |
|
| Q |
654 |
gccatgttatcattggcaaacca |
676 |
Q |
| |
|
|||||| ||||| || |||||| |
|
|
| T |
26208190 |
gccatgcaatcatgggtaaacca |
26208168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 566 - 693
Target Start/End: Complemental strand, 26088649 - 26088522
Alignment:
| Q |
566 |
aactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatgttatca |
665 |
Q |
| |
|
|||| ||| ||||||| |||||| | ||| || |||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
26088649 |
aactcgtttacttttgctccaactgggacccctatcttcaaaacatcaacaagcaacttttcattgtaaaattgctcagcaaatattggccatgcgatca |
26088550 |
T |
|
| Q |
666 |
ttggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
|||||||||||| ||||||||||||||| |
|
|
| T |
26088549 |
ttggcaaaccagcattcaagctttcaag |
26088522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 566 - 693
Target Start/End: Complemental strand, 26112437 - 26112310
Alignment:
| Q |
566 |
aactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatgttatca |
665 |
Q |
| |
|
|||| ||| ||||||| |||||| | ||| || |||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||||||| |||| |
|
|
| T |
26112437 |
aactcgtttacttttgctccaactgggacccctatcttcaaaacatcaacaagcaacttttcattgtaaaattgctcagcaaatattggccatgcgatca |
26112338 |
T |
|
| Q |
666 |
ttggcaaaccagaattcaagctttcaag |
693 |
Q |
| |
|
|||||||||||| ||||||||||||||| |
|
|
| T |
26112337 |
ttggcaaaccagcattcaagctttcaag |
26112310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 571 - 693
Target Start/End: Complemental strand, 26227834 - 26227712
Alignment:
| Q |
571 |
gttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatgttatcattggc |
670 |
Q |
| |
|
|||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||| || || ||||||||||||||||| || |||||| |
|
|
| T |
26227834 |
gttcacttttgatccaaccgaaactactatcttcaaaacaaaaacaagaagcttctcattgtaaaactgctccgcaaacattggccatgtaataattggc |
26227735 |
T |
|
| Q |
671 |
aaaccagaattcaagctttcaag |
693 |
Q |
| |
|
|||| | | ||||||||||||| |
|
|
| T |
26227734 |
aaactaacactcaagctttcaag |
26227712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 26224787 - 26224718
Alignment:
| Q |
120 |
actaatgtaatacttattaaaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaa |
189 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
26224787 |
actaatgtaacacttattaaaaaatgttagagaaatctttatattagtaactataaaataaatgttgcaa |
26224718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 4682429 - 4682341
Alignment:
| Q |
120 |
actaatgtaatacttattaaaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaaca |
208 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||||| |||||||||||||| ||| || ||||||||||| ||||||||||||||| |
|
|
| T |
4682429 |
actaatgtaacacttactaaaaaatgttagaaaaatctctatattagtaactattaaacaagtgttgcaagataaatgttactaaaaca |
4682341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 26224843 - 26224788
Alignment:
| Q |
36 |
ttgaaacggttttgttttagtggaatagaaatgtgttttggtataaatgctaccaa |
91 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
26224843 |
ttgaaacggttttgttttagtggaatagaaatgtgttgtgatataaatgctaccaa |
26224788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 533
Target Start/End: Complemental strand, 26228044 - 26227872
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
|||||||||||||||| ||||| || || || ||||||||||||||||| |||| || |||||| ||||||| ||||||| ||||| || ||| | |
|
|
| T |
26228044 |
tcttcaatgattttaggtcatctattaattgcatcaagttgttgtaagagattccattctcatctatactcttctttgcagcataaccaa-tttttttac |
26227946 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttc |
533 |
Q |
| |
|
|| ||||||| ||| | | ||||| ||||||||||||| |||||||||||||| | ||||| ||||||| |
|
|
| T |
26227945 |
cctgctcctcattgctatgctctcttcttcacttcccatcaaaatctcaacagcctttgcaatctcttcccttc |
26227872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 669
Target Start/End: Complemental strand, 41562730 - 41562683
Alignment:
| Q |
622 |
cttctcattgtaaaattgttcagcaaacattggccatgttatcattgg |
669 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
41562730 |
cttctcattaaagaattgttcagcaaacattggccaagttatcattgg |
41562683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 133; Significance: 9e-69; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 360 - 676
Target Start/End: Complemental strand, 44904326 - 44904010
Alignment:
| Q |
360 |
tcttcaatgattttagctcatcaatcaactgaatcaagttgttgtaagaatctccaccttcctctatagtcttcttggcagcatcaccaagcttctttgc |
459 |
Q |
| |
|
||||||||||||| |||||||| |||||||||| ||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||| ||| ||||| |
|
|
| T |
44904326 |
tcttcaatgatttcagctcatctatcaactgaaccaagttgttgtaagagtgtccaccttcctctatagtcctcttggcagcatcgccaaacttttttgc |
44904227 |
T |
|
| Q |
460 |
tctcatcctcatcgcttttccctcttgaccacttcccatcaatatctcaacagccttcactatctcctcccttctcaccactacctcttcaccaatgcta |
559 |
Q |
| |
|
|||| ||||||| |||| | ||||||||| |||||| ||| ||||| ||||||| | ||||| |||||||| |||| | ||||| || || |||| |
|
|
| T |
44904226 |
tctcgtcctcatttctttgctgtcttgaccatttcccaacaaaatctccgcagcctttgcaatctcttcccttctaaccattgcctctacagtaaagcta |
44904127 |
T |
|
| Q |
560 |
agccaaaactggttcacttttgatccaaccgcgactccaatcttcaaaacatcaacaagaagcttctcattgtaaaattgttcagcaaacattggccatg |
659 |
Q |
| |
|
||| |||| ||| |||||| |||||| | ||| || |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
44904126 |
ttccataacttgttttcttttgctccaactgggacccctatcttcaaaacatcaacaagcaacctctcattgtaaaattgttcagcaaacattggccatg |
44904027 |
T |
|
| Q |
660 |
ttatcattggcaaacca |
676 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
44904026 |
tgatcattggcaaacca |
44904010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 8239014 - 8239130
Alignment:
| Q |
108 |
aaaaagagcgttactaatgtaatacttattaaaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaac |
207 |
Q |
| |
|
|||||||| |||||||||| || |||||||||||||||||||| |||||| |||||||||||||| ||| || |||||||||||||||||||||||||| |
|
|
| T |
8239014 |
aaaaagagtgttactaatgcaacacttattaaaaaatgttagaaaaatctctatattagtaactattaaacaagtgttgcaagatgaatgttactaaaac |
8239113 |
T |
|
| Q |
208 |
atgtaaatgtattagtg |
224 |
Q |
| |
|
|| || ||||| ||||| |
|
|
| T |
8239114 |
atatatatgtactagtg |
8239130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 53303244 - 53303345
Alignment:
| Q |
108 |
aaaaagagcgttactaatgtaatacttattaaaaaatgttagagaaatctttatattagtaacta-aaaaataaatgttgcaagatgaatgttactaaaa |
206 |
Q |
| |
|
|||||||| |||||||||| || |||||||||||||||||||| |||||| |||||||||||||| ||| || ||||||||||| ||||||||||||| |
|
|
| T |
53303244 |
aaaaagagtgttactaatgcaacacttattaaaaaatgttagaaaaatctctatattagtaactacttaaacaagtgttgcaagataaatgttactaaaa |
53303343 |
T |
|
| Q |
207 |
ca |
208 |
Q |
| |
|
|| |
|
|
| T |
53303344 |
ca |
53303345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 25641759 - 25641847
Alignment:
| Q |
120 |
actaatgtaatacttattaaaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaaca |
208 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||||| |||||||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
25641759 |
actaatgtaacacttactaaaaaatgttagaaaaatctctatattagtaactattaaacaagtgttgcaagatgaatgttactaaaaca |
25641847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 45 - 170
Target Start/End: Original strand, 6634335 - 6634467
Alignment:
| Q |
45 |
ttttgttttagtggaatagaaatgtgttttggtataaatg-ctaccaagttagtaata--aacacca----aaaagagcgttactaatgtaatacttatt |
137 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||||| |||| || ||||||||| ||||| | |||||| ||||| ||||||| ||||||| |
|
|
| T |
6634335 |
ttttgttttagtggaatagaaatgtgttctgatataaaacactactaaattagtaatattaacactactgaaaaagaaagttaccaatgtaacacttatt |
6634434 |
T |
|
| Q |
138 |
aaaaaatgttagagaaatctttatattagtaac |
170 |
Q |
| |
|
||||||||||||| |||||| |||||||||||| |
|
|
| T |
6634435 |
aaaaaatgttagaaaaatctctatattagtaac |
6634467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 30269851 - 30269951
Alignment:
| Q |
108 |
aaaaagagcgttactaatgtaatacttattaaaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaac |
207 |
Q |
| |
|
|||||||| |||||||||| || ||||||||||||||||||| |||||| |||||||||||||| ||| || |||||||| ||||||||||||||||| |
|
|
| T |
30269851 |
aaaaagagtgttactaatgcaacacttattaaaaaatgttagtaaaatctctatattagtaactattaaacaagtgttgcaatatgaatgttactaaaac |
30269950 |
T |
|
| Q |
208 |
a |
208 |
Q |
| |
|
| |
|
|
| T |
30269951 |
a |
30269951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 31331430 - 31331341
Alignment:
| Q |
120 |
actaatgtaatacttattaaaaaatgtta-gagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaaca |
208 |
Q |
| |
|
|||||||||| ||||| |||||||||||| || |||||| |||||||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
31331430 |
actaatgtaacacttactaaaaaatgttaagaaaaatctctatattagtaactattaaacaagtgttgcaagatgaatgttactaaaaca |
31331341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 31338151 - 31338062
Alignment:
| Q |
120 |
actaatgtaatacttattaaaaaatgtta-gagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaaca |
208 |
Q |
| |
|
|||||||||| ||||| |||||||||||| || |||||| |||||||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
31338151 |
actaatgtaacacttactaaaaaatgttaagaaaaatctctatattagtaactattaaacaagtgttgcaagatgaatgttactaaaaca |
31338062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 45 - 208
Target Start/End: Complemental strand, 5075446 - 5075279
Alignment:
| Q |
45 |
ttttgttttagtggaatagaaatgtgttttggtataaatgctaccaagttagtaata--aacacc----aaaaagagcgttactaatgtaatacttatta |
138 |
Q |
| |
|
|||||||||||||||||| |||||||| || |||||| |||| |||||||||||| ||||| |||| ||| ||||| ||||||| |||| ||| |
|
|
| T |
5075446 |
ttttgttttagtggaata--aatgtgttatgatataaacactactaagttagtaatattaacactcctgaaaatgagtgttaccaatgtaacacttctta |
5075349 |
T |
|
| Q |
139 |
aaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaaca |
208 |
Q |
| |
|
|||||||||||| ||||||||||||| ||||| | || ||| ||||||||| ||||||||| ||||||| |
|
|
| T |
5075348 |
aaaaatgttagaaaaatctttatattggtaaccattaagtaagtgttgcaaggtgaatgttattaaaaca |
5075279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 45 - 167
Target Start/End: Original strand, 37191124 - 37191252
Alignment:
| Q |
45 |
ttttgttttagtggaatagaaatgtgttttggtataaatgctaccaagttagtaata--aacacca----aaaagagcgttactaatgtaatacttatta |
138 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||| |||| |||||||||||| |||| | ||||||| ||||| ||||||| |||||||| |
|
|
| T |
37191124 |
ttttgttttagtggaatagaaatgtgttcggatataaacactactaagttagtaatattaacagtactgaaaaagagtgttaccaatgtaacacttatta |
37191223 |
T |
|
| Q |
139 |
aaaaatgttagagaaatctttatattagt |
167 |
Q |
| |
|
|||||||||| | |||||| ||||||||| |
|
|
| T |
37191224 |
aaaaatgttaaaaaaatctctatattagt |
37191252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 225
Target Start/End: Original strand, 7413754 - 7413938
Alignment:
| Q |
45 |
ttttgttttagtggaatagaaatgtgttttggtataaatgctaccaagttagtaata--aacacc----aaaaagagcgttactaatgtaatacttatta |
138 |
Q |
| |
|
||||||||||| |||||| |||||||| || |||||| |||| |||||||||||| ||||| ||||||||| |||| ||||||| |||||||| |
|
|
| T |
7413754 |
ttttgttttagaggaata--aatgtgttatgatataaacactactaagttagtaatattaacactcctgaaaaagagcattaccaatgtaacacttatta |
7413851 |
T |
|
| Q |
139 |
aaaaatgttagagaaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaacatgtaaatgtattagtga |
225 |
Q |
| |
|
||||| |||||| |||| | ||||||| |||| | || ||| ||||| ||| ||||||||||||||||| ||| |||| |||||| |
|
|
| T |
7413852 |
aaaaaggttagaaaaatttctatattaataaccattaagtaagtgttgtaaggtgaatgttactaaaacacataagtgtagtagtga |
7413938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 7400962 - 7400906
Alignment:
| Q |
152 |
aaatctttatattagtaactaaaaaataaatgttgcaagatgaatgttactaaaaca |
208 |
Q |
| |
|
|||||| |||||||||||||| ||| || ||||||||||||||||||||||||||| |
|
|
| T |
7400962 |
aaatctctatattagtaactattaaacaagtgttgcaagatgaatgttactaaaaca |
7400906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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