View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11832_high_21 (Length: 225)
Name: NF11832_high_21
Description: NF11832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11832_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 28748246 - 28748387
Alignment:
| Q |
1 |
ttattattttattttctgttattacaggagnnnnnnnaaaccatcataaagcaagaatgtgtagtttattttagttactaaggttgcagtagcttttagt |
100 |
Q |
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| T |
28748246 |
ttattattttattctctgttattacaggagtttttt-aaaccatcataaagcaagaatgtgtagtttattgtagttaataaggttgcagtagctttta-- |
28748342 |
T |
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| Q |
101 |
tgatttttgaaactggtggcattatatgcttcattaccacggtaagccactat |
153 |
Q |
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| T |
28748343 |
--------gaaaccggtggcattatatgcttcattaccatggtaagccactat |
28748387 |
T |
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