View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11832_high_8 (Length: 467)

Name: NF11832_high_8
Description: NF11832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11832_high_8
NF11832_high_8
[»] chr4 (3 HSPs)
chr4 (1-449)||(49352096-49352544)
chr4 (1-449)||(49340732-49341168)
chr4 (399-448)||(19030497-19030546)
[»] chr5 (1 HSPs)
chr5 (1-449)||(32783725-32784179)
[»] chr7 (11 HSPs)
chr7 (12-449)||(29750488-29750925)
chr7 (12-449)||(29602369-29602806)
chr7 (49-376)||(29743524-29743851)
chr7 (86-208)||(36217880-36218002)
chr7 (50-166)||(36273765-36273881)
chr7 (126-208)||(35977164-35977246)
chr7 (126-208)||(35981730-35981812)
chr7 (126-208)||(35998576-35998658)
chr7 (126-208)||(36003142-36003224)
chr7 (86-172)||(36221907-36221993)
chr7 (126-214)||(35946501-35946589)
[»] chr1 (1 HSPs)
chr1 (12-438)||(35157617-35158043)


Alignment Details
Target: chr4 (Bit Score: 437; Significance: 0; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 1 - 449
Target Start/End: Complemental strand, 49352544 - 49352096
Alignment:
Q  1 ctgtctctgataaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49352544 ctgtctctgataaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaa 49352445  T
Q  101 tttctttcccaatctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagacc 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49352444 tttctttcccaatctccaccaattctggatattttttctcttcttcctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagacc 49352345  T
Q  201 ttccaaaatgtatgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgtattaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49352344 ttccaaaatgtatgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgtattaaa 49352245  T
Q  301 tacttcaactcaacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgattttgta 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49352244 tacttcaactcaacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgattttgta 49352145  T
Q  401 gctgctccaaatcaaggtttgtaaagttctcttggtgaattgggttagg 449  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49352144 gctgctccaaatcaaggtttgtaaagctctcttggtgaattgggttagg 49352096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 449
Target Start/End: Complemental strand, 49341168 - 49340732
Alignment:
Q  1 ctgtctctgataaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaa 100  Q
    ||||| ||| |||||||||||||||| | ||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49341168 ctgtccctgttaaacttccactcttctatatcatcttttaagaatagagaactccccaatgttcttagggccaaaggaagccctccacatttttgtacaa 49341069  T
Q  101 tttctttcccaatctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagacc 200  Q
    |||||||||||||||||  ||||| |||||| || |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||  | |||||||    
T  49341068 tttctttcccaatctccatcaattttggatagttcttctcttctccctcttcaaaagcccatttgacaaatacagacaaggaatcctctctaaaaagacc 49340969  T
Q  201 ------ttccaaaatgtatgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgt 294  Q
          |||||||||||||||||||||| ||||||||||||||||||||||||||                  | ||||||| ||||||| |||||||||    
T  49340968 ctccaattccaaaatgtatgatgtgttgatgcccatcattttggcaattgagtgg------------------agtttacttccttcagcacctacttgt 49340887  T
Q  295 attaaatacttcaactcaacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgat 394  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||| |||    
T  49340886 attaaattcttcaactcaacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccaggaatcacatttctcagatgat 49340787  T
Q  395 tttgtagctgctccaaatcaaggtttgtaaagttctcttggtgaattgggttagg 449  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||    
T  49340786 tttgtagctgattcaaatcaaggtttgtatagttctcttggtgaattgggttagg 49340732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 19030546 - 19030497
Alignment:
Q  399 tagctgctccaaatcaaggtttgtaaagttctcttggtgaattgggttag 448  Q
    |||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  19030546 tagctgctccaaatcaaggtttctaaacttctcttggtgaattggcttag 19030497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 32783725 - 32784179
Alignment:
Q  1 ctgtctctgataaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaa 100  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  32783725 ctgtctctgataaacttccactcttccacatcaacttttaggaatagagaactccccgatgttcttagggccaaaggaagccctccacatttttgtacaa 32783824  T
Q  101 tttctttcccaatctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagacc 200  Q
    ||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||  ||||||||||    
T  32783825 tttctttcccaatcttcatcaattctggatagtttttctcttctccctctttaaaagcccatttgataaatacagacaaggaatcctccggagaaagacc 32783924  T
Q  201 tt------ccaaaatgtatgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgt 294  Q
    ||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  32783925 tttcaattccaaaatgtatgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcactaagactttacttccttcagcacctacttgt 32784024  T
Q  295 attaaatacttcaactcaacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgat 394  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| | || || ||| |||    
T  32784025 attaaattcttcaactcaacccatttgacacgatcctggttccatacatcgtccaagacgagcaagaactttttaccagcaatctcatttctcagatgat 32784124  T
Q  395 tttgtagctgctccaaatcaaggtttgtaaagttctcttggtgaattgggttagg 449  Q
    |||||||||| | ||||||| |||||||| ||||| |||||||||||||||||||    
T  32784125 tttgtagctgattcaaatcatggtttgtatagttcgcttggtgaattgggttagg 32784179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 449
Target Start/End: Complemental strand, 29750925 - 29750488
Alignment:
Q  12 aaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaatttctttccca 111  Q
    ||||||||||||||||| ||||  ||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29750925 aaacttccactcttcaatatcatcttttaagaacaatgaactccccaatgttcttagggccaaaggaagccctccacatttttgaacaatttctttccca 29750826  T
Q  112 atctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaatgt 211  Q
    |||||   ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||  ||||||||||| |||| |||    
T  29750825 atctctatcaattttggatattttttctcttctccctctttaaatgcccatttgacaaatacagacaaggaatcctctctagaaagaccttgcaaagtgt 29750726  T
Q  212 atgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgtattaaatacttcaactc 311  Q
    | |||||||| |||| ||||||||| ||||||||||| |||||||||||||| || ||||||||| ||||| | |||||||||| || || ||||| |||    
T  29750725 aagatgtgtttgtgcacatcattttagcaattgagtgactacgtgtagtcactaaaactttacttccttcatctcctacttgtaatagattcttcacctc 29750626  T
Q  312 aacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgattttgtagctgctccaaa 411  Q
     | ||||||||||||||||||  |||| || || ||||||||||| ||||| ||||| |||||||    ||| || | | || |||||||||||| || |    
T  29750625 tatccatttgacacgatcctcgctccacacgtcatccaagacgagcaagaattttttgccagcaagtgtgtttctcaaatgagtttgtagctgctgcaca 29750526  T
Q  412 tcaaggtttgtaaagttctcttggtgaattgggttagg 449  Q
    ||||||||| ||| |||||||| ||||||  |||||||    
T  29750525 tcaaggtttttaatgttctcttcgtgaatgaggttagg 29750488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 12 - 449
Target Start/End: Original strand, 29602369 - 29602806
Alignment:
Q  12 aaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaatttctttccca 111  Q
    ||||||||||||||| | ||||  ||||||||| |   ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29602369 aaacttccactcttctatatcatcttttaagaacaataaactccccaatgttcttagggccaaaggaagccctccacatttttgaacaatttctttccca 29602468  T
Q  112 atctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaatgt 211  Q
    |||||   ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||  ||||||||||| |||| |||    
T  29602469 atctctatcaattttggatattttttctcttctccctctttaaatgcccatttgacaaatacagacaaggaatcctctctagaaagaccttgcaaagtgt 29602568  T
Q  212 atgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgtattaaatacttcaactc 311  Q
    | |||||||| |||| ||||||||| ||||||||||| |||||||||||||| || ||||||||| ||||| | |||||||||| || || ||||| |||    
T  29602569 aagatgtgtttgtgcacatcattttagcaattgagtgactacgtgtagtcactaaaactttacttccttcatctcctacttgtaatagattcttcacctc 29602668  T
Q  312 aacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgattttgtagctgctccaaa 411  Q
     | ||||||||||||||||||  |||| || || |||||||| || ||||| ||||| |||||||    ||| || | | || |||||||||||| || |    
T  29602669 tatccatttgacacgatcctcgctccacacgtcatccaagacaagcaagaattttttgccagcaagtgtgtttctcaaatgagtttgtagctgctgcaca 29602768  T
Q  412 tcaaggtttgtaaagttctcttggtgaattgggttagg 449  Q
    ||||||||| ||| |||||||| ||||||  |||||||    
T  29602769 tcaaggtttttaatgttctcttcgtgaatgaggttagg 29602806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 49 - 376
Target Start/End: Complemental strand, 29743851 - 29743524
Alignment:
Q  49 gaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaatttctttcccaatctcctccaattctggatattttttctcttctccct 148  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   ||||| |||||||||||| ||||||||||    
T  29743851 gaactccccaatgttcttagggccaaaggaagccctccacatttttgcacaatttctttcccaatctctatcaattttggatattttttgtcttctccct 29743752  T
Q  149 ctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaatgtatgatgtgttggtgcccatcattttggcaattgagtg 248  Q
    ||||||| |||||||||||||| ||||| |||||||||| |  ||| |||||||||||| |||||||||| || |||| ||||||||  |||||||||||    
T  29743751 ctttaaatgcccatttgacaaatacagacaaggaatcctttctagagagaccttccaaagtgtatgatgtatttgtgcacatcatttcagcaattgagtg 29743652  T
Q  249 gctacgtgtagtcaccaagactttactttcttcagcgcctacttgtattaaatacttcaactcaacccatttgacacgatcctcattccatacatcgtcc 348  Q
    ||||||||||||||| || ||||||||| ||||| | |||||||||| ||||| ||||| ||| | |||||||||| |||||||||||||||| || |||    
T  29743651 gctacgtgtagtcactaaaactttacttccttcatctcctacttgtaataaattcttcacctctatccatttgacatgatcctcattccatacgtcatcc 29743552  T
Q  349 aagacgagtaagaactttttaccagcaa 376  Q
    |||||||| ||||| |||||||||||||    
T  29743551 aagacgagaaagaattttttaccagcaa 29743524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 86 - 208
Target Start/End: Complemental strand, 36218002 - 36217880
Alignment:
Q  86 cacatttttgtacaatttctttcccaatctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatc 185  Q
    |||||||||  ||||||||||| ||||||||| | |  | |||||||||||  |||||||| || || || |||||||| ||||||| ||| ||  ||||    
T  36218002 cacattttttcacaatttcttttccaatctccactagatttggatatttttcttcttctccatccttgaatgcccatttcacaaacagagacaaacaatc 36217903  T
Q  186 ctctagagaaagaccttccaaaa 208  Q
    |||||  ||||||||||||||||    
T  36217902 ctctaacgaaagaccttccaaaa 36217880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 36273881 - 36273765
Alignment:
Q  50 aactccctaatgttcttagggccaaaggaagccctccacatttttgtacaatttctttcccaatctcctccaattctggatattttttctcttctccctc 149  Q
    |||| ||||||||||| |   |||||||||  ||||  |||||||  || |||||| ||||||| ||| |||| | |||||| |||||||||||||| ||    
T  36273881 aactgcctaatgttctcaataccaaaggaattcctcttcattttttcactatttctctcccaatatccaccaaatgtggatactttttctcttctccttc 36273782  T
Q  150 tttaaaagcccatttga 166  Q
    |||||| ||||||||||    
T  36273781 tttaaatgcccatttga 36273765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 35977164 - 35977246
Alignment:
Q  126 tggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaa 208  Q
    |||||||||||| ||||| || || || || |||||||||||||||| ||||||  |||||| | |||||||||||| |||||    
T  35977164 tggatattttttttcttcgccttccttgaacgcccatttgacaaacagagataaacaatcctttggagaaagacctttcaaaa 35977246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 35981730 - 35981812
Alignment:
Q  126 tggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaa 208  Q
    |||||||||| | ||||| || || ||||| |||||||||||||||| ||||||  |||||| | |||||||||||| |||||    
T  35981730 tggatattttgtttcttcaccttccttaaatgcccatttgacaaacagagataaacaatcctttggagaaagacctttcaaaa 35981812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 35998576 - 35998658
Alignment:
Q  126 tggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaa 208  Q
    |||||||||||| ||||| || || || || |||||||||||||||| ||||||  |||||| | |||||||||||| |||||    
T  35998576 tggatattttttttcttcgccttccttgaacgcccatttgacaaacagagataaacaatcctttggagaaagacctttcaaaa 35998658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 36003142 - 36003224
Alignment:
Q  126 tggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaa 208  Q
    |||||||||| | ||||| || || ||||| |||||||||||||||| ||||||  |||||| | |||||||||||| |||||    
T  36003142 tggatattttgtttcttcaccttccttaaatgcccatttgacaaacagagataaacaatcctttggagaaagacctttcaaaa 36003224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 36221993 - 36221907
Alignment:
Q  86 cacatttttgtacaatttctttcccaatctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaaca 172  Q
    |||||||||  ||||||||||| ||||||||| | |  | || ||||||||  |||||||| |||||||| |||||||| |||||||    
T  36221993 cacattttttcacaatttcttttccaatctccactagatttgaatatttttcttcttctccgtctttaaatgcccatttcacaaaca 36221907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 35946501 - 35946589
Alignment:
Q  126 tggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaatgtatg 214  Q
    |||||| ||||| ||||| || || || || |||||||||||||||| ||| ||  ||| || | ||||||||||||||||||| ||||    
T  35946501 tggatactttttttcttcaccttccttgaatgcccatttgacaaacagagacaaacaattctttggagaaagaccttccaaaatatatg 35946589  T

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Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 438
Target Start/End: Complemental strand, 35158043 - 35157617
Alignment:
Q  12 aaacttccactcttcaacatcaaattttaagaatagagaactccctaatgttcttagggccaaaggaagccctccacatttttgtacaatttctttccca 111  Q
    ||||||||||||||  | ||||| ||||||||| || |||||||| ||||| ||||||||||| |||||||||||||||||  | ||||| ||||| |||    
T  35158043 aaacttccactcttgtatatcaacttttaagaacagcgaactccccaatgtccttagggccaatggaagccctccacatttaagcacaatatcttttcca 35157944  T
Q  112 atctcctccaattctggatattttttctcttctccctctttaaaagcccatttgacaaacacagataaggaatcctctagagaaagaccttccaaaatgt 211  Q
    ||||||   | ||| |||| |||  |||||||||||||||||||||||||||| ||||| ||||| || || ||||||  |||||| |||| |||| |||    
T  35157943 atctccattagttcaggatgtttactctcttctccctctttaaaagcccattttacaaatacagacaatgagtcctctttagaaagcccttgcaaattgt 35157844  T
Q  212 atgatgtgttggtgcccatcattttggcaattgagtggctacgtgtagtcaccaagactttactttcttcagcgcctacttgtattaaatacttcaactc 311  Q
    | || ||||  ||||||||||| || || |  | || |||||||| |||||| |  ||||||||| ||| ||| ||| || ||||||||  | | || ||    
T  35157843 aagaagtgtaagtgcccatcatgttagctaccgtgtcgctacgtgaagtcactagtactttacttccttgagcacctgctggtattaaacccctaaattc 35157744  T
Q  312 aacccatttgacacgatcctcattccatacatcgtccaagacgagtaagaactttttaccagcaatcacgttccttagacgattttgtagctgctccaaa 411  Q
      ||||||||||||||||||||||||| ||||||||||| || ||||||||||||| ||||||||  | ||  || ||||||||||  || |||||||||    
T  35157743 ttcccatttgacacgatcctcattccacacatcgtccaaaacaagtaagaacttttgaccagcaagtatgtctctaagacgatttttcagttgctccaaa 35157644  T
Q  412 tcaaggtttgtaaagttctcttggtga 438  Q
      || |||| ||| |||||| ||||||    
T  35157643 ctaaagtttttaatgttctcctggtga 35157617  T

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