View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11832_low_1 (Length: 757)

Name: NF11832_low_1
Description: NF11832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11832_low_1
NF11832_low_1
[»] chr7 (57 HSPs)
chr7 (528-754)||(35314904-35315127)
chr7 (297-472)||(4167446-4167621)
chr7 (316-441)||(35315199-35315324)
chr7 (297-450)||(131967-132120)
chr7 (316-472)||(14109017-14109171)
chr7 (316-472)||(14418974-14419128)
chr7 (291-421)||(10257385-10257513)
chr7 (295-448)||(4857194-4857347)
chr7 (288-421)||(43006371-43006504)
chr7 (316-396)||(4168871-4168951)
chr7 (297-451)||(40930413-40930567)
chr7 (293-419)||(22744737-22744863)
chr7 (316-450)||(25154904-25155038)
chr7 (517-657)||(24494806-24494950)
chr7 (297-450)||(27899182-27899335)
chr7 (291-447)||(13286965-13287121)
chr7 (297-421)||(22061792-22061916)
chr7 (316-454)||(43930333-43930471)
chr7 (297-419)||(46674933-46675055)
chr7 (663-728)||(43114857-43114922)
chr7 (299-383)||(18802424-18802508)
chr7 (411-479)||(24494990-24495058)
chr7 (335-459)||(38406051-38406175)
chr7 (295-383)||(40926554-40926642)
chr7 (320-370)||(10256141-10256191)
chr7 (320-398)||(24873617-24873695)
chr7 (295-361)||(29344157-29344223)
chr7 (296-450)||(46458681-46458835)
chr7 (663-728)||(9392575-9392640)
chr7 (316-393)||(35484335-35484412)
chr7 (293-421)||(22060454-22060582)
chr7 (295-398)||(19278346-19278449)
chr7 (295-398)||(25153651-25153754)
chr7 (298-361)||(29345135-29345198)
chr7 (319-373)||(35483590-35483645)
chr7 (297-388)||(46457065-46457156)
chr7 (316-379)||(47537079-47537142)
chr7 (298-424)||(4858338-4858464)
chr7 (320-358)||(29409298-29409336)
chr7 (316-385)||(7338156-7338225)
chr7 (288-373)||(12631880-12631963)
chr7 (297-450)||(33459511-33459664)
chr7 (294-379)||(37781949-37782034)
chr7 (660-728)||(13599039-13599107)
chr7 (316-388)||(17288250-17288322)
chr7 (335-450)||(26406158-26406273)
chr7 (316-379)||(40881105-40881168)
chr7 (322-421)||(43007646-43007745)
chr7 (320-398)||(22746340-22746418)
chr7 (320-358)||(29408264-29408302)
chr7 (670-728)||(37236078-37236136)
chr7 (297-379)||(47928469-47928551)
chr7 (342-420)||(48754036-48754114)
chr7 (321-414)||(7146799-7146891)
chr7 (316-405)||(7148071-7148160)
chr7 (316-373)||(33071683-33071740)
chr7 (297-398)||(33458305-33458405)
[»] scaffold0098 (3 HSPs)
scaffold0098 (517-711)||(41123-41314)
scaffold0098 (316-483)||(40930-41089)
scaffold0098 (291-421)||(42343-42472)
[»] chr4 (59 HSPs)
chr4 (517-757)||(38418684-38418918)
chr4 (319-483)||(38418952-38419116)
chr4 (291-472)||(47668543-47668724)
chr4 (525-728)||(2293204-2293417)
chr4 (291-421)||(50531753-50531883)
chr4 (294-447)||(44159077-44159230)
chr4 (295-424)||(34439654-34439783)
chr4 (296-445)||(34438400-34438549)
chr4 (297-398)||(38417548-38417649)
chr4 (297-421)||(6138992-6139116)
chr4 (316-479)||(39592228-39592391)
chr4 (297-467)||(86798-86968)
chr4 (320-388)||(41348257-41348325)
chr4 (316-373)||(41349570-41349627)
chr4 (295-476)||(43894098-43894279)
chr4 (319-450)||(17319059-17319190)
chr4 (293-379)||(11482787-11482873)
chr4 (290-396)||(43419397-43419503)
chr4 (316-450)||(50530517-50530651)
chr4 (316-398)||(56000301-56000383)
chr4 (297-373)||(5417299-5417375)
chr4 (297-421)||(44128331-44128455)
chr4 (321-472)||(35787815-35787966)
chr4 (297-467)||(6616162-6616332)
chr4 (287-421)||(33377361-33377495)
chr4 (613-757)||(43894433-43894582)
chr4 (316-448)||(30682997-30683129)
chr4 (295-398)||(52658904-52659007)
chr4 (292-398)||(28103506-28103612)
chr4 (411-479)||(2293464-2293532)
chr4 (297-373)||(43418028-43418104)
chr4 (295-450)||(11114948-11115103)
chr4 (665-728)||(18091866-18091929)
chr4 (316-379)||(26045146-26045209)
chr4 (291-398)||(26393147-26393254)
chr4 (284-398)||(37560319-37560433)
chr4 (528-602)||(43894331-43894405)
chr4 (294-384)||(56001302-56001392)
chr4 (297-398)||(29663638-29663738)
chr4 (402-467)||(29687929-29687994)
chr4 (297-398)||(31711087-31711188)
chr4 (402-479)||(36604780-36604857)
chr4 (292-353)||(44160475-44160536)
chr4 (316-361)||(47242966-47243011)
chr4 (347-419)||(5687220-5687292)
chr4 (296-396)||(29686250-29686350)
chr4 (297-357)||(38371866-38371926)
chr4 (291-379)||(43708825-43708913)
chr4 (320-424)||(44304973-44305077)
chr4 (297-424)||(11113737-11113864)
chr4 (292-399)||(15786942-15787049)
chr4 (320-447)||(17494145-17494272)
chr4 (297-388)||(46796056-46796147)
chr4 (316-379)||(47572600-47572663)
chr4 (295-365)||(96734-96804)
chr4 (297-379)||(50496990-50497072)
chr4 (316-398)||(55953872-55953954)
chr4 (316-397)||(1273454-1273534)
chr4 (316-361)||(47573701-47573746)
[»] chr1 (66 HSPs)
chr1 (532-757)||(14764459-14764677)
chr1 (316-483)||(14764243-14764410)
chr1 (293-472)||(49141442-49141621)
chr1 (292-388)||(40110682-40110778)
chr1 (528-728)||(51218651-51218855)
chr1 (299-424)||(40811192-40811317)
chr1 (292-388)||(26801933-26802029)
chr1 (291-450)||(14169608-14169767)
chr1 (297-424)||(36511325-36511452)
chr1 (287-424)||(22167764-22167901)
chr1 (316-445)||(36509825-36509954)
chr1 (294-467)||(44977213-44977386)
chr1 (291-472)||(51726790-51726971)
chr1 (320-472)||(9633793-9633945)
chr1 (316-388)||(24516348-24516420)
chr1 (316-388)||(40109375-40109447)
chr1 (292-464)||(52742930-52743102)
chr1 (297-472)||(8092593-8092768)
chr1 (316-373)||(26803261-26803318)
chr1 (297-421)||(25785963-25786087)
chr1 (316-464)||(26056101-26056249)
chr1 (411-479)||(51218905-51218973)
chr1 (320-383)||(14765129-14765192)
chr1 (291-424)||(40812605-40812736)
chr1 (316-388)||(24517644-24517716)
chr1 (316-450)||(2972976-2973110)
chr1 (321-423)||(19464619-19464721)
chr1 (316-382)||(38283775-38283841)
chr1 (316-445)||(19466178-19466307)
chr1 (525-578)||(26055987-26056040)
chr1 (285-398)||(47411468-47411581)
chr1 (316-424)||(13641271-13641379)
chr1 (316-464)||(50678380-50678525)
chr1 (528-578)||(37624410-37624460)
chr1 (300-357)||(22169280-22169337)
chr1 (316-420)||(3979311-3979415)
chr1 (297-421)||(25787161-25787285)
chr1 (297-361)||(43808578-43808642)
chr1 (416-467)||(22766771-22766822)
chr1 (416-467)||(23082077-23082128)
chr1 (298-373)||(38280846-38280921)
chr1 (297-424)||(47560134-47560261)
chr1 (665-728)||(52759649-52759712)
chr1 (316-398)||(13930695-13930777)
chr1 (299-361)||(21246532-21246594)
chr1 (528-578)||(27689513-27689563)
chr1 (528-578)||(30551429-30551479)
chr1 (295-361)||(38451545-38451611)
chr1 (297-379)||(44979430-44979512)
chr1 (291-472)||(21276983-21277164)
chr1 (402-467)||(27689383-27689448)
chr1 (299-399)||(13929292-13929392)
chr1 (668-728)||(17244467-17244527)
chr1 (316-388)||(50679851-50679923)
chr1 (295-378)||(48934234-48934317)
chr1 (539-578)||(50678599-50678638)
chr1 (316-383)||(51725357-51725424)
chr1 (320-419)||(52181304-52181403)
chr1 (665-727)||(7111254-7111316)
chr1 (402-464)||(30551543-30551605)
chr1 (297-379)||(30743082-30743164)
chr1 (320-370)||(45042627-45042677)
chr1 (297-398)||(14071223-14071324)
chr1 (316-373)||(34653449-34653506)
chr1 (402-459)||(37624529-37624586)
chr1 (292-421)||(47136684-47136813)
[»] chr2 (46 HSPs)
chr2 (561-757)||(3532446-3532636)
chr2 (316-483)||(3532208-3532375)
chr2 (316-472)||(7983641-7983797)
chr2 (292-464)||(23177663-23177836)
chr2 (292-464)||(23588920-23589093)
chr2 (320-413)||(14510514-14510607)
chr2 (336-464)||(12852920-12853048)
chr2 (294-373)||(7982304-7982383)
chr2 (297-472)||(25570816-25570991)
chr2 (316-472)||(29424558-29424714)
chr2 (297-472)||(14509204-14509379)
chr2 (320-398)||(3533646-3533724)
chr2 (318-467)||(10367255-10367404)
chr2 (402-479)||(14714592-14714669)
chr2 (525-602)||(14714715-14714792)
chr2 (320-405)||(25569787-25569872)
chr2 (316-449)||(32614399-32614532)
chr2 (544-728)||(14714902-14715095)
chr2 (291-378)||(15850101-15850188)
chr2 (316-467)||(37868991-37869142)
chr2 (417-479)||(4512221-4512283)
chr2 (525-578)||(23177897-23177950)
chr2 (525-578)||(23589154-23589207)
chr2 (411-479)||(26205122-26205190)
chr2 (297-472)||(4829460-4829635)
chr2 (297-447)||(7036961-7037111)
chr2 (525-612)||(4512329-4512413)
chr2 (525-578)||(6708819-6708872)
chr2 (294-378)||(37867748-37867832)
chr2 (316-379)||(33553404-33553467)
chr2 (299-378)||(41795992-41796071)
chr2 (318-448)||(7490165-7490295)
chr2 (321-398)||(2581822-2581899)
chr2 (318-467)||(12959656-12959805)
chr2 (533-578)||(41296294-41296339)
chr2 (291-379)||(42596549-42596637)
chr2 (407-467)||(45047447-45047507)
chr2 (316-379)||(20630710-20630773)
chr2 (402-465)||(21010451-21010514)
chr2 (297-383)||(7038367-7038453)
chr2 (295-357)||(8538686-8538748)
chr2 (316-378)||(35801085-35801147)
chr2 (533-575)||(45047625-45047667)
chr2 (529-578)||(12853113-12853162)
chr2 (295-388)||(12854134-12854227)
chr2 (316-373)||(15850704-15850761)
[»] chr8 (74 HSPs)
chr8 (316-472)||(41522634-41522790)
chr8 (528-756)||(39325493-39325723)
chr8 (298-464)||(37276197-37276363)
chr8 (525-737)||(44102965-44103187)
chr8 (316-472)||(2421239-2421395)
chr8 (292-467)||(39546628-39546803)
chr8 (318-472)||(13366996-13367150)
chr8 (294-388)||(22621164-22621258)
chr8 (297-479)||(36756059-36756241)
chr8 (294-483)||(117040-117229)
chr8 (316-450)||(8095360-8095494)
chr8 (288-373)||(41521303-41521388)
chr8 (316-388)||(22619909-22619981)
chr8 (335-458)||(7486110-7486233)
chr8 (402-483)||(39325769-39325850)
chr8 (316-472)||(19913506-19913662)
chr8 (291-479)||(44103235-44103423)
chr8 (297-379)||(16346094-16346176)
chr8 (297-419)||(31623901-31624023)
chr8 (297-450)||(35943902-35944056)
chr8 (402-479)||(21670164-21670241)
chr8 (402-483)||(21961923-21962004)
chr8 (319-447)||(39220696-39220824)
chr8 (316-421)||(41866908-41867013)
chr8 (281-357)||(2419853-2419929)
chr8 (316-388)||(34616143-34616215)
chr8 (316-424)||(34617189-34617297)
chr8 (380-464)||(36938759-36938843)
chr8 (294-398)||(38591027-38591131)
chr8 (297-405)||(43275745-43275853)
chr8 (289-379)||(4534021-4534111)
chr8 (316-398)||(24069466-24069548)
chr8 (295-421)||(41867913-41868039)
chr8 (297-398)||(29738286-29738387)
chr8 (319-450)||(20308622-20308753)
chr8 (319-450)||(21095255-21095386)
chr8 (289-356)||(35462654-35462721)
chr8 (298-424)||(36940027-36940153)
chr8 (316-398)||(45194497-45194579)
chr8 (316-378)||(45195844-45195906)
chr8 (295-472)||(10052097-10052274)
chr8 (316-361)||(22914247-22914292)
chr8 (294-379)||(35463028-35463113)
chr8 (287-472)||(36070163-36070348)
chr8 (297-422)||(36071374-36071499)
chr8 (297-373)||(22913187-22913263)
chr8 (297-396)||(10053766-10053865)
chr8 (316-362)||(8096601-8096647)
chr8 (528-578)||(10052330-10052380)
chr8 (525-575)||(13513643-13513693)
chr8 (525-575)||(13603176-13603226)
chr8 (299-361)||(23768542-23768604)
chr8 (544-578)||(37276066-37276100)
chr8 (318-379)||(9190481-9190542)
chr8 (316-361)||(12818768-12818813)
chr8 (295-379)||(37474075-37474159)
chr8 (291-379)||(9189383-9189471)
chr8 (316-400)||(14820207-14820291)
chr8 (316-388)||(24068344-24068416)
chr8 (527-578)||(36756289-36756341)
chr8 (544-599)||(21962065-21962120)
chr8 (316-411)||(43277928-43278023)
chr8 (520-571)||(45541697-45541748)
chr8 (318-396)||(7770919-7770997)
chr8 (528-578)||(13363418-13363468)
chr8 (402-464)||(13363532-13363594)
chr8 (411-473)||(21267241-21267303)
chr8 (318-424)||(38789066-38789172)
chr8 (528-578)||(39546517-39546567)
chr8 (402-479)||(13513520-13513597)
chr8 (402-479)||(13603053-13603130)
chr8 (318-419)||(31625383-31625484)
chr8 (297-398)||(38589816-38589916)
chr8 (335-472)||(44606172-44606309)
[»] chr5 (47 HSPs)
chr5 (294-450)||(12830906-12831062)
chr5 (294-450)||(12862886-12863042)
chr5 (316-388)||(8188230-8188302)
chr5 (316-472)||(7426655-7426811)
chr5 (295-421)||(32735476-32735602)
chr5 (316-445)||(42510128-42510257)
chr5 (317-398)||(22819569-22819650)
chr5 (316-424)||(15857612-15857720)
chr5 (320-448)||(32734150-32734277)
chr5 (356-472)||(2167461-2167576)
chr5 (284-379)||(11907200-11907295)
chr5 (319-450)||(40058035-40058166)
chr5 (297-398)||(12936122-12936223)
chr5 (316-464)||(21387651-21387799)
chr5 (297-419)||(1663182-1663304)
chr5 (316-373)||(42511711-42511768)
chr5 (316-464)||(18693712-18693860)
chr5 (316-388)||(30253600-30253672)
chr5 (297-391)||(12950287-12950381)
chr5 (297-458)||(7345350-7345511)
chr5 (316-377)||(8187180-8187240)
chr5 (316-357)||(12829584-12829625)
chr5 (297-398)||(18677971-18678072)
chr5 (297-450)||(19525256-19525409)
chr5 (525-578)||(21387860-21387913)
chr5 (316-388)||(224620-224692)
chr5 (297-349)||(7427993-7428045)
chr5 (289-373)||(24761766-24761849)
chr5 (316-424)||(40059322-40059430)
chr5 (299-398)||(12933748-12933847)
chr5 (299-398)||(12947909-12948008)
chr5 (297-376)||(23679142-23679221)
chr5 (297-376)||(23855591-23855670)
chr5 (295-373)||(39135693-39135771)
chr5 (316-357)||(12861563-12861604)
chr5 (292-373)||(19523973-19524054)
chr5 (316-423)||(15510258-15510365)
chr5 (316-379)||(24070419-24070482)
chr5 (316-379)||(24071482-24071545)
chr5 (296-398)||(19827160-19827262)
chr5 (297-419)||(26403302-26403424)
chr5 (316-358)||(29906130-29906172)
chr5 (291-361)||(30916175-30916245)
chr5 (112-158)||(38617662-38617708)
chr5 (316-385)||(21006154-21006223)
chr5 (316-357)||(22818174-22818215)
chr5 (316-361)||(39134681-39134726)
[»] scaffold1974 (2 HSPs)
scaffold1974 (297-464)||(582-749)
scaffold1974 (524-578)||(468-522)
[»] scaffold1878 (2 HSPs)
scaffold1878 (297-464)||(525-692)
scaffold1878 (524-578)||(752-806)
[»] scaffold0290 (1 HSPs)
scaffold0290 (297-464)||(9432-9599)
[»] chr3 (59 HSPs)
chr3 (296-483)||(17350037-17350224)
chr3 (299-479)||(12062323-12062503)
chr3 (319-483)||(39133034-39133198)
chr3 (316-398)||(21127939-21128021)
chr3 (292-472)||(53808308-53808488)
chr3 (525-753)||(17349752-17349995)
chr3 (285-467)||(8371203-8371385)
chr3 (297-479)||(25583109-25583290)
chr3 (318-399)||(43346466-43346547)
chr3 (336-464)||(11219464-11219592)
chr3 (316-472)||(23559833-23559989)
chr3 (528-753)||(39133243-39133483)
chr3 (291-398)||(23561145-23561252)
chr3 (319-398)||(48866158-48866237)
chr3 (394-472)||(47765530-47765608)
chr3 (316-450)||(48867398-48867532)
chr3 (291-419)||(10987652-10987780)
chr3 (318-450)||(35174350-35174482)
chr3 (402-479)||(7483464-7483541)
chr3 (335-467)||(19622038-19622170)
chr3 (320-424)||(32980446-32980550)
chr3 (297-421)||(35173142-35173266)
chr3 (297-421)||(42633883-42634007)
chr3 (621-715)||(24753269-24753368)
chr3 (527-578)||(53808543-53808594)
chr3 (296-370)||(7921691-7921765)
chr3 (525-578)||(11219653-11219706)
chr3 (684-757)||(31638480-31638553)
chr3 (291-420)||(54653964-54654093)
chr3 (666-728)||(21728185-21728247)
chr3 (316-373)||(12060672-12060729)
chr3 (296-421)||(42632700-42632825)
chr3 (418-483)||(31638234-31638301)
chr3 (316-388)||(43345333-43345405)
chr3 (316-379)||(33000839-33000902)
chr3 (318-365)||(38639034-38639081)
chr3 (316-379)||(39531855-39531918)
chr3 (665-728)||(47430958-47431021)
chr3 (297-424)||(49334331-49334458)
chr3 (316-379)||(50150735-50150798)
chr3 (402-464)||(34902948-34903010)
chr3 (297-383)||(51400210-51400296)
chr3 (316-398)||(51401371-51401453)
chr3 (316-373)||(1031830-1031887)
chr3 (318-379)||(4067942-4068003)
chr3 (316-361)||(39530809-39530854)
chr3 (316-361)||(45730651-45730696)
chr3 (316-421)||(51825618-51825723)
chr3 (297-398)||(54752611-54752712)
chr3 (317-361)||(32999812-32999856)
chr3 (316-424)||(48252947-48253055)
chr3 (285-361)||(48336330-48336406)
chr3 (665-727)||(28776725-28776787)
chr3 (297-419)||(41386125-41386247)
chr3 (291-373)||(47808151-47808233)
chr3 (666-728)||(50879972-50880034)
chr3 (316-361)||(7583973-7584018)
chr3 (663-728)||(37610542-37610607)
chr3 (287-396)||(48035346-48035455)
[»] chr6 (32 HSPs)
chr6 (298-472)||(18139433-18139607)
chr6 (316-472)||(14328720-14328876)
chr6 (316-472)||(14421730-14421886)
chr6 (316-388)||(13800045-13800117)
chr6 (297-472)||(31738358-31738533)
chr6 (405-467)||(13507122-13507184)
chr6 (525-578)||(34084074-34084127)
chr6 (291-421)||(8412313-8412443)
chr6 (290-388)||(14326141-14326239)
chr6 (290-388)||(14419151-14419249)
chr6 (320-398)||(31740292-31740370)
chr6 (292-377)||(1692064-1692149)
chr6 (298-479)||(33801956-33802137)
chr6 (295-379)||(1757533-1757617)
chr6 (319-367)||(16269819-16269867)
chr6 (316-424)||(22299897-22300005)
chr6 (292-358)||(5693647-5693713)
chr6 (297-398)||(5311274-5311375)
chr6 (298-447)||(27440146-27440295)
chr6 (299-419)||(8411083-8411203)
chr6 (297-361)||(27108231-27108295)
chr6 (297-361)||(27150028-27150092)
chr6 (320-361)||(1693038-1693079)
chr6 (316-383)||(9927620-9927687)
chr6 (319-362)||(16251632-16251675)
chr6 (316-379)||(27107195-27107258)
chr6 (316-379)||(27149001-27149064)
chr6 (297-379)||(11724335-11724417)
chr6 (665-727)||(11801121-11801183)
chr6 (291-424)||(27438779-27438912)
chr6 (298-383)||(33129277-33129362)
chr6 (316-373)||(33807703-33807760)
[»] scaffold0025 (1 HSPs)
scaffold0025 (316-467)||(56651-56802)
[»] scaffold0084 (3 HSPs)
scaffold0084 (316-483)||(13139-13306)
scaffold0084 (613-757)||(12843-12992)
scaffold0084 (528-602)||(13020-13094)
[»] scaffold0122 (2 HSPs)
scaffold0122 (297-472)||(15945-16115)
scaffold0122 (320-415)||(17163-17258)
[»] scaffold0046 (2 HSPs)
scaffold0046 (613-757)||(23755-23904)
scaffold0046 (546-599)||(23674-23727)
[»] scaffold0015 (2 HSPs)
scaffold0015 (402-483)||(207733-207814)
scaffold0015 (544-599)||(207617-207672)
[»] scaffold0045 (1 HSPs)
scaffold0045 (302-467)||(77130-77297)
[»] scaffold0051 (2 HSPs)
scaffold0051 (529-578)||(39741-39790)
scaffold0051 (402-464)||(39855-39917)
[»] scaffold0003 (2 HSPs)
scaffold0003 (298-447)||(47066-47215)
scaffold0003 (291-424)||(48450-48583)
[»] scaffold0166 (1 HSPs)
scaffold0166 (289-373)||(4263-4346)
[»] scaffold0009 (1 HSPs)
scaffold0009 (296-379)||(205591-205674)
[»] scaffold0096 (1 HSPs)
scaffold0096 (316-356)||(5067-5107)
[»] scaffold0041 (1 HSPs)
scaffold0041 (316-379)||(85115-85178)
[»] scaffold2127 (1 HSPs)
scaffold2127 (292-421)||(512-641)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 5e-95; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 528 - 754
Target Start/End: Complemental strand, 35315127 - 35314904
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaac 627  Q
    ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||||| |||||||||||||||||    
T  35315127 gttgaatcatgtagggtcttttgtactttactgtgaactactaacacctaagttaatccattcat---cttcttcttccctcatcatcttgaacaacaac 35315031  T
Q  628 ttcatcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 727  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  35315030 ttcatcaataaaatctagaaaatcccaaaaataataattaaacctactatttaatcaccacacaaccatcattgtcatcttcatctataatcatcaacac 35314931  T
Q  728 cattcttcttaaatattattcttcatc 754  Q
    |||||||| ||||||||||||||||||    
T  35314930 cattcttcctaaatattattcttcatc 35314904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 297 - 472
Target Start/End: Original strand, 4167446 - 4167621
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| | |  ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||||||||| || ||||    
T  4167446 ggcttaatacatcctccgatcccttaacttattttattttctcagtttaatcccttaactattaagtgtgtcaatttgatcctataagtcttctgtcgtt 4167545  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || |||||||||||| ||||| | |||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  4167546 tactgttttagtcatttctgtcaatttttaacatcaaatttctaaggtgaaccatgtttaaaggtggtccaccata 4167621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 316 - 441
Target Start/End: Complemental strand, 35315324 - 35315199
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| |||| ||||||||| || |||||| |||||||||| |||||    
T  35315324 tcccttaacttattttattttctcagtttgatcccttaattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgttttagtcctctct 35315225  T
Q  416 gttagttttgaacatcaaatatctaa 441  Q
    ||||||||| |||||||||| |||||    
T  35315224 gttagtttttaacatcaaatgtctaa 35315199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 297 - 450
Target Start/End: Complemental strand, 132120 - 131967
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| |||| |||||||||   |||||    
T  132120 ggcttaatacatccttaggtcccttaacttattttattttctcagtttggtcccttaactattaagtgtgtcgatttggtcccataagtcttcctccgtt 132021  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    || |  | |  ||||||| ||||||||| ||| | |||| ||||||||||||||    
T  132020 tactaatgtgatcatctccgttagtttttaaccttaaatgtctaaggtgaacca 131967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 14109171 - 14109017
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| |||| |||||||||||| || ||| ||||  | |||| ||  ||||| |||||||||  ||||||||| ||||     
T  14109171 tcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccat--gtcttttgccgtttaccgttttagtcctctcc 14109074  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  14109073 gttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 14109017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 14419128 - 14418974
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| |||| |||||||||||| || ||| ||||  | |||| ||  ||||| |||||||||  ||||||||| ||||     
T  14419128 tcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcccat--gtcttttgccgtttaccgttttagtcctctcc 14419031  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  14419030 gttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 14418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 291 - 421
Target Start/End: Complemental strand, 10257513 - 10257385
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||| |||||||||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||  |    
T  10257513 tttttaggcttaatacatcccactgtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactct--t 10257416  T
Q  391 gccgtttattgttttagtcatctctgttagt 421  Q
    | |||||| | |||||||||| |||||||||    
T  10257415 gtcgtttactattttagtcatttctgttagt 10257385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 295 - 448
Target Start/End: Original strand, 4857194 - 4857347
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||| ||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| || ||| || |||| |||| | || |||| |||||    
T  4857194 ttggcctaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccg 4857293  T
Q  395 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaac 448  Q
    |||| |||||||||| |||| ||||||||| |||||||||| ||||||||||||    
T  4857294 tttactgttttagtcctctccgttagtttttaacatcaaatgtctaaggtgaac 4857347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 421
Target Start/End: Original strand, 43006371 - 43006504
Alignment:
Q  288 taattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtct 387  Q
    |||||||| ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| |||||||||||||| ||||||| ||||  |||||||    
T  43006371 taatttttaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtct 43006470  T
Q  388 tatgccgtttattgttttagtcatctctgttagt 421  Q
    ||||||||||  | |||| |||||||| ||||||    
T  43006471 tatgccgtttgctattttggtcatctccgttagt 43006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 396
Target Start/End: Complemental strand, 4168951 - 4168871
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||  | ||||||| |||||||    
T  4168951 tcccttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaatttggtctcacaagtcttttgccgtt 4168871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 297 - 451
Target Start/End: Original strand, 40930413 - 40930567
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||| | |||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| ||  |||    
T  40930413 ggcttaatacatcgtttgatcccttgatttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtt 40930512  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccat 451  Q
    ||  ||||||||| ||||| |||||||| |||||||||||||||||||| |||||    
T  40930513 taccgttttagtcctctctattagtttttaacatcaaatatctaaggtggaccat 40930567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 293 - 419
Target Start/End: Original strand, 22744737 - 22744863
Alignment:
Q  293 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgc 392  Q
    ||||||||||||||||| ||   ||||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||||||||| ||||||||    
T  22744737 ttttggcttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgc 22744836  T
Q  393 cgtttattgttttagtcatctctgtta 419  Q
    |||||| | |||| ||| |||| ||||    
T  22744837 cgtttactattttggtcttctccgtta 22744863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 316 - 450
Target Start/End: Complemental strand, 25155038 - 25154904
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| ||||||||||||||||| |||||| |||||||| ||  |||| |||| | | ||||||  |||| ||||||||     
T  25155038 tcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttggtcatctcc 25154939  T
Q  416 gttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||| ||||| ||| | |||| ||||||||||||||    
T  25154938 gtttgtttttaaccttaaatgtctaaggtgaacca 25154904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 517 - 657
Target Start/End: Complemental strand, 24494950 - 24494806
Alignment:
Q  517 aaaaaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgt 611  Q
    |||| |||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||   |||  |||||| |||||||||     |  | || |    
T  24494950 aaaagataaccgttgaatcatgtggcgtctattgtactttactgtgaaccactcacacctaataaaattgattcatcttcttcttccctcatctcttcat 24494851  T
Q  612 catcttgaacaacaacttcatcaataaaatctagaaaatcccaaaa 657  Q
     ||||| |||||||||||||||||||||||| | ||||||||||||    
T  24494850 gatcttcaacaacaacttcatcaataaaatcca-aaaatcccaaaa 24494806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 297 - 450
Target Start/End: Complemental strand, 27899335 - 27899182
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||   ||| ||||||||||||||||||||| | |||||| ||| |||||||| || | | |||||||  ||| |||| |||| || ||||    
T  27899335 ggcttaatacattcctcagtcccttaacttattttattttcttagtttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtt 27899236  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    || | |||| ||| | || ||||||||| ||| | |||||||||||||||||||    
T  27899235 tactattttggtcttatccgttagtttttaaccttaaatatctaaggtgaacca 27899182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 13287121 - 13286965
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||||||||||||||   |  |||||||  |||||||| ||| ||  |||||||||||||||||||||||| ||||||| ||||  || |||||||    
T  13287121 ttttttggcttaatacatcccccgatcccttagtttattttaatttctctatttgatcccttaactattaagtgtttcaatttggtcccttatgtcttat 13287022  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 447  Q
    || ||||| | |||| ||| |||  ||||||||| ||| | |||| |||||| ||||    
T  13287021 gctgtttactattttggtcctcttcgttagtttttaaccttaaatgtctaagatgaa 13286965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 22061916 - 22061792
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||||||||||| | |||||| |||| |||| ||||||| ||  || ||||||| |||| |||| ||||||||||||    
T  22061916 ggcttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtt 22061817  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    || | |||||||| |||| ||||||    
T  22061816 tactattttagtcttctccgttagt 22061792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 316 - 454
Target Start/End: Original strand, 43930333 - 43930471
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| |||| |||| ||||||||||  || ||||||| ||||||||| |||| || |||||| | |||| ||| |||||    
T  43930333 tcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtttactattttggtcctctct 43930432  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatt 454  Q
    |||| |||| ||| | |||| ||||||||| || |||||    
T  43930433 gttaatttttaaccttaaatgtctaaggtggactatatt 43930471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 297 - 419
Target Start/End: Complemental strand, 46675055 - 46674933
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| ||||||||||||||||| |||||| || |||| |||| |||| |||| |||||||    
T  46675055 ggcttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtt 46674956  T
Q  397 tattgttttagtcatctctgtta 419  Q
    || | |||| ||| |||| ||||    
T  46674955 tactattttggtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 663 - 728
Target Start/End: Complemental strand, 43114922 - 43114857
Alignment:
Q  663 aattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||||||||||| |||| ||||||||||||||| | |||||| ||||| ||||||    
T  43114922 aattaaacctactatttaatcactacaccaccatcattatcatctttatctatcatcatcaacacc 43114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 299 - 383
Target Start/End: Complemental strand, 18802508 - 18802424
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    ||||||||||| ||   |||||||||||||||| | |||||| ||||||||| ||||||| |||||| |||||||||||| ||||    
T  18802508 cttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataa 18802424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 24495058 - 24494990
Alignment:
Q  411 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||||||||| |||||||||| ||||| ||||||||||||||||  ||||||| |||||||||||    
T  24495058 tctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaaagtggtccaccatatgcctta 24494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 335 - 459
Target Start/End: Original strand, 38406051 - 38406175
Alignment:
Q  335 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 434  Q
    |||||| |||| |||| ||||||| |||||| ||||  | || | |||| |||| || |||||| |||||| ||| | || |||| |||| |||||||||    
T  38406051 ttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtcctttccgttaatttttaacatcaaa 38406150  T
Q  435 tatctaaggtgaaccatatttaaag 459  Q
    | |||||||||||||||||||||||    
T  38406151 tgtctaaggtgaaccatatttaaag 38406175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 40926642 - 40926554
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    ||||||||||||||| || | ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||||||||    
T  40926642 ttggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataa 40926554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 10256141 - 10256191
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaa 370  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  10256141 ttaacttattttattttctcagtttggtcccttaactattaagtgtctcaa 10256191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 24873695 - 24873617
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||| | |||||| |||||| || ||||||| |||||| ||||||| |||| ||||||||| |||||||||    
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgttta 24873617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 29344157 - 29344223
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||  |  ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  29344157 ttggcttaatacatctcccggtcccttaacttattttaatttctcagtttgaccccttaactattaa 29344223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 296 - 450
Target Start/End: Complemental strand, 46458835 - 46458681
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 395  Q
    |||||||||||||| ||   |||||||| | |||||   |||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| | ||||    
T  46458835 tggcttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgt 46458736  T
Q  396 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    |||   |||| ||| |||| ||| ||||| ||| | |||| ||||||||||||||    
T  46458735 ttaccattttggtcctctccgtttgtttttaaccttaaatgtctaaggtgaacca 46458681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 663 - 728
Target Start/End: Complemental strand, 9392640 - 9392575
Alignment:
Q  663 aattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||||||||||| |||| | ||||||| ||||| |||||||| ||||| ||||||    
T  9392640 aattaaacctactatttaatcactacaccatcatcattgtcatcttcatctatcatcatcaacacc 9392575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 393
Target Start/End: Complemental strand, 35484412 - 35484335
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    ||||||||||||||||||||  |||||||| ||| |||||||| |||| | |||||||||||| |||| |||| ||||    
T  35484412 tcccttaacttattttatttcctcagtttggtcctttaactataaagtatttcaatttagtcccataactcttctgcc 35484335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 293 - 421
Target Start/End: Original strand, 22060454 - 22060582
Alignment:
Q  293 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgc 392  Q
    ||||||||||||| ||| ||   || ||||||||||||| | |||| | |||| |||  ||||||| |||||| ||||||| || | | |||||||||||    
T  22060454 ttttggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgc 22060553  T
Q  393 cgtttattgttttagtcatctctgttagt 421  Q
    |||||| | |||| |||||||| ||||||    
T  22060554 cgtttactattttggtcatctccgttagt 22060582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 19278346 - 19278449
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||||||| ||   ||||||||||||||||    ||||| |||| |||||||| ||| |||||| ||||||| |||| |||| |||| |||||    
T  19278346 ttggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccg 19278445  T
Q  395 ttta 398  Q
    ||||    
T  19278446 ttta 19278449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 25153651 - 25153754
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| | |||    
T  25153651 ttggcttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccg 25153750  T
Q  395 ttta 398  Q
    ||||    
T  25153751 ttta 25153754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 298 - 361
Target Start/End: Complemental strand, 29345198 - 29345135
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||  ||  ||| |||| |||||||| ||||||||||||||||||||||||||||    
T  29345198 gcttaatacatcactcgatcctttaatttattttaatttttcagtttgatcccttaactattaa 29345135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 35483590 - 35483645
Alignment:
Q  319 cttaacttattttatttt-ttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||| |||||||    
T  35483590 cttaacttattttatttttttcagtttggtcccttaactataaagtgtttcaattt 35483645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 388
Target Start/End: Original strand, 46457065 - 46457156
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||| ||   | ||||||||||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| ||||    
T  46457065 ggcttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatctt 46457156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 47537142 - 47537079
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||||||||||||  || |||||||| ||||||||||||||| ||| ||||||| |||||    
T  47537142 tcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtcct 47537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 424
Target Start/End: Complemental strand, 4858464 - 4858338
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| || ||| ||||||| |||| |||| |||| ||  ||||    
T  4858464 gcttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgttt 4858365  T
Q  398 attgttttagtcatctctgttagtttt 424  Q
    | | ||||| || ||||| ||||||||    
T  4858364 actattttaatcctctctattagtttt 4858338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 29409336 - 29409298
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactat 358  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  29409336 ttaacttattttattttctcagtttgatcccttaactat 29409298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 7338156 - 7338225
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagt 385  Q
    |||||||||||||||| | || ||| ||  |||||||||| ||||| ||||||||||||||||| |||||    
T  7338156 tcccttaacttattttttcttctcacttcaatcccttaacaattaaatgtgtcaatttagtcctgtaagt 7338225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 373
Target Start/End: Complemental strand, 12631963 - 12631880
Alignment:
Q  288 taattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||||||||||||     ||||||||||||||||| |||||||||| | | |||||||||| |||||| |||||||    
T  12631963 taattttttggcttaatacatctccaggtcccttaacttatttta-tttttcagttgggt-ccttaactataaagtgtctcaattt 12631880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 450
Target Start/End: Complemental strand, 33459664 - 33459511
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | |||| |||||||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| |||||||||   |||||    
T  33459664 ggcttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgtt 33459565  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    || |  | | ||| | |||||||||||| ||| | || | ||||||||||||||    
T  33459564 tactaatgtggtcttttctgttagtttttaaccttaactgtctaaggtgaacca 33459511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 294 - 379
Target Start/End: Original strand, 37781949 - 37782034
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||  ||  |||||||| |||||||| ||| |||||||| | | ||||||||||| ||| ||||||| |||||    
T  37781949 tttggcttaatacatccctcggtcccttaaattattttaatttctcagtttggttctttaactattaaatgtttcaatttggtcct 37782034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 728
Target Start/End: Complemental strand, 13599107 - 13599039
Alignment:
Q  660 aataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    |||| |||||||||||||||||| || |||| ||||||||| ||| | |||||||| ||||| ||||||    
T  13599107 aatatttaaacctactatttaattactacaccaccatcattgtcaacttcatctatcatcatcaacacc 13599039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 17288322 - 17288250
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||||||||||||||| | |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||    
T  17288322 tcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 17288250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 26406158 - 26406273
Alignment:
Q  335 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 434  Q
    |||||| ||||||||| |||| || |||||| |||||||  ||  |||| |||| |||||||||   |||| |||||||| |||| |||| ||| | |||    
T  26406158 ttttcaatttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttattttttaaccttaaa 26406257  T
Q  435 tatctaaggtgaacca 450  Q
    | ||||||||||||||    
T  26406258 tgtctaaggtgaacca 26406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 40881105 - 40881168
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||  || ||||||| |||||    
T  40881105 tcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 40881168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 43007745 - 43007646
Alignment:
Q  322 aacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagt 421  Q
    ||||||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| |||||||||||| |||||| | |||||||  |||| ||||||    
T  43007745 aacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttactattttagttctctccgttagt 43007646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 22746418 - 22746340
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||| | |||||| |||  |||| ||||||| |||||| ||||||| |||| |||| |||| |||||||||    
T  22746418 ttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgttta 22746340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 29408264 - 29408302
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactat 358  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  29408264 ttaatttattttattttctcagtttgatcccttaactat 29408302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 728
Target Start/End: Original strand, 37236078 - 37236136
Alignment:
Q  670 cctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    |||||||||||||||| |||  ||||||||| ||||| |||||||| ||||| ||||||    
T  37236078 cctactatttaatcactacatcaccatcattgtcatcttcatctatcatcatcaacacc 37236136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 47928551 - 47928469
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||||||||  ||  ||||||||||||||||| ||| | |||||  || |||||||||||| ||| ||||||| |||||    
T  47928551 ggcttaatacatccctccgtcccttaacttattttaatttcttagtttagtctcttaactattaaatgtttcaatttggtcct 47928469  T

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Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 342 - 420
Target Start/End: Original strand, 48754036 - 48754114
Alignment:
Q  342 tttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttag 420  Q
    |||| |||| ||| ||| |||||| ||||||||||||||||| ||||||| ||||||   |||||||| |||| |||||    
T  48754036 tttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgttag 48754114  T

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Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 321 - 414
Target Start/End: Original strand, 7146799 - 7146891
Alignment:
Q  321 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctc 414  Q
    ||||||||||| | |||||| |||| |||| ||||||| |||||| ||||||| ||||| ||| ||||||| | |||| |||||| ||| ||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcct-taaatcttatgtcatttactgttttggtcctctc 7146891  T

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Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 405
Target Start/End: Complemental strand, 7148160 - 7148071
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgtttt 405  Q
    |||||||||||||||| | |||||| |||| ||   ||||||| |||||| ||||||| ||||  ||| ||||||| |||||| ||||||    
T  7148160 tcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgtttt 7148071  T

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Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 33071740 - 33071683
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||| ||| |||||||  | ||||||||||||| ||| |||||||    
T  33071740 tcccttaacttattttaatttctcagtttagttccttaactattaaatgtttcaattt 33071683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 33458305 - 33458405
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||| ||||||||||||   |||||| |||| ||| |||||||| |||||| |||| ||||||| ||||||||| | |||||    
T  33458305 ggcttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgtt 33458403  T
Q  397 ta 398  Q
    ||    
T  33458404 ta 33458405  T

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Target: scaffold0098 (Bit Score: 153; Significance: 1e-80; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 517 - 711
Target Start/End: Original strand, 41123 - 41314
Alignment:
Q  517 aaaaaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatct 616  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||    
T  41123 aaaagataaccgttgaatcatgtaggatttattgtactttactgtgaaccactaacacctaagttaatccattcat---cttcttcttccctcatcatct 41219  T
Q  617 tgaacaacaacttcatcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcat 711  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  41220 taaacaacaacttcatcaataaaatctagaaaatcccaaaaataataattaaacctactatttaatcaccacacaaccatcattgtcatcttcat 41314  T

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Target: scaffold0098; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 316 - 483
Target Start/End: Original strand, 40930 - 41089
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||        |||  ||||||||| || |||||| |||||||||  |||||    
T  40930 tcccttaaccttttttattttttcagtttgatcccttaactattaagtttg--------gtctcataagtcttctgtcgtttactgttttagttctctct 41021  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41022 gttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaa 41089  T

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Target: scaffold0098; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 291 - 421
Target Start/End: Complemental strand, 42472 - 42343
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||  ||| |||| |||| |    
T  42472 tttttcggcttaatacatctt-cggtcccttaacttattttattttctcagtttgatcccttaactattacgtgtatcaatttgatcccataaatcttct 42374  T
Q  391 gccgtttattgttttagtcatctctgttagt 421  Q
    | |||||| | |||| ||| |||||||||||    
T  42373 gtcgtttactattttggtcctctctgttagt 42343  T

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Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 517 - 757
Target Start/End: Complemental strand, 38418918 - 38418684
Alignment:
Q  517 aaaaaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatct 616  Q
    |||||||| | ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  38418918 aaaaaatagctgttaaatcatgtagggtctattgtactttactatgaaccactaacacctaagttaatccattcat---cttcttcttccctcgtcatct 38418822  T
Q  617 tgaacaacaacttcatcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctata 716  Q
    | ||||||||||||||||||||| || |||||||||||||| || |||||||||||| |||||||| | ||||||   |||||  ||||| ||||||||     
T  38418821 tcaacaacaacttcatcaataaactccagaaaatcccaaaaatactaattaaacctattatttaataatcacaca---atcatcgtcatcttcatctatc 38418725  T
Q  717 atcattaacaccattcttcttaaatattattcttcatcttc 757  Q
    ||||| |||| | || ||| |||||||| ||||||||||||    
T  38418724 atcatcaacatccttgttcctaaatattcttcttcatcttc 38418684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 319 - 483
Target Start/End: Complemental strand, 38419116 - 38418952
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 418  Q
    |||||||||||||||||| ||||||| || |||||| |||||||||||||||||| |||  ||||||||| ||||||||| ||||||||||||||| |||    
T  38419116 cttaacttattttattttctcagtttaattccttaattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgtt 38419017  T
Q  419 agttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |||||| ||||| |||  | |||| ||||||||||||| || ||||||| |||||||||||||||    
T  38419016 agtttttaacattaaacgtttaagatgaaccatatttataggtggtccaccatatgccttactaa 38418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 291 - 472
Target Start/End: Complemental strand, 47668724 - 47668543
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||| |||||||||||||| ||   ||| |||||||||||| | |||||| |||| |||| ||||||| |||||| |||| || ||||  ||  || | |    
T  47668724 ttttatggcttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatct 47668625  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||||  |||||||||||||| ||||    
T  47668624 gccgtttattgttttggtcctctctgttagtttttaacatcaaatatctaaggtaaaccatggttaaagatggtccaccata 47668543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 525 - 728
Target Start/End: Complemental strand, 2293417 - 2293204
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgtcatcttga 619  Q
    ||||||||||||||| || |||||||||||||||||||||||||| ||||||||   |||| |||||| |||||||||     |  | || | ||||| |    
T  2293417 accgttgaatcatgtggggtctattgtactttactgtgaaccactcacacctaataaaatcgattcatcttcttcttccgtcatctcttcatgatcttca 2293318  T
Q  620 acaacaacttcatcaataaaatctagaaaatcc--caaaact---aataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatcta 714  Q
    ||||||||||||||||||||||| | |||||||  ||||| |   ||||||||  |||||| |||||||| ||||||||||||||| ||||| |||||||    
T  2293317 acaacaacttcatcaataaaatccaaaaaatcccacaaaaataaaaataattattcctactctttaatcatcacacaaccatcattgtcatcttcatcta 2293218  T
Q  715 taatcattaacacc 728  Q
    | ||||| ||||||    
T  2293217 tcatcataaacacc 2293204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 291 - 421
Target Start/End: Complemental strand, 50531883 - 50531753
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||||||||||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||| |    
T  50531883 ttttttggcttaatacatcccactgtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactctttt 50531784  T
Q  391 gccgtttattgttttagtcatctctgttagt 421  Q
    | |||||| | |||||||||| |||||||||    
T  50531783 gtcgtttactattttagtcatttctgttagt 50531753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 294 - 447
Target Start/End: Original strand, 44159077 - 44159230
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    |||||||||||| ||||  |  ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || | | || |||| ||||    
T  44159077 tttggcttaatatatctcccggtcctttaacttattttattttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgcc 44159176  T
Q  394 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 447  Q
    ||||||| |||| |||||||| ||||||||| ||    ||||||||||||||||    
T  44159177 gtttattattttggtcatctccgttagtttttaatcctaaatatctaaggtgaa 44159230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 295 - 424
Target Start/End: Complemental strand, 34439783 - 34439654
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    |||||||||||||||  ||| ||||||||||||||||||||| ||||| || |||||||||||| || ||| ||||||| |||| |||| |||| |||||    
T  34439783 ttggcttaatacatccctcagtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccg 34439684  T
Q  395 tttattgttttagtcatctctgttagtttt 424  Q
    |||| | |||| |||||||| |||||||||    
T  34439683 tttactattttggtcatctccgttagtttt 34439654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 34438400 - 34438549
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 395  Q
    |||||||||||||||  |  || |||||||||||||||||| |||||||  |||||||||||| |||||| ||||||| |||| |||| |||| ||||||    
T  34438400 tggcttaatacatctcccgatctcttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgt 34438499  T
Q  396 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtg 445  Q
    ||| | |||| ||  |||||||||||||| ||| |||||| |||| ||||    
T  34438500 ttactattttggttctctctgttagtttttaacctcaaatgtctatggtg 34438549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 38417548 - 38417649
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| | |  ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||| ||||||| ||||    
T  38417548 ggcttaatacatcctcctgtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtt 38417647  T
Q  397 ta 398  Q
    ||    
T  38417648 ta 38417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 6138992 - 6139116
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| | |  ||||||||||||||||||||| |||||||| |||||||| |||||| ||| ||||||| |||  |||| |||||||  |||    
T  6138992 ggcttaatacatcctccgatcccttaacttattttattttctcagtttggtcccttaattattaaatgtctcaatttggtctcataactcttatgttgtt 6139091  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    |||| |||| |||||||||||||||    
T  6139092 tattattttggtcatctctgttagt 6139116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 316 - 479
Target Start/End: Complemental strand, 39592391 - 39592228
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||||||||||||| |||||| |||  |||| ||||||| |||||| |||| || ||||  || ||||| || |||||| |||||| ||  ||||     
T  39592391 tcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctcc 39592292  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| |||| |||||||||| |||||||||| |||| ||||||| ||||||| ||||| |||||    
T  39592291 gttaatttttaacatcaaatgtctaaggtgagccatgtttaaaggtggtccatcatatacctta 39592228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 297 - 467
Target Start/End: Original strand, 86798 - 86968
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | || ||||| |||||||   |||||| |||| | || ||||||| |||  | ||||||| |||| |||| | || |||||||    
T  86798 ggcttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtt 86897  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    || |||||| ||| |||| ||||||||| |||||||||| ||||||||||||||| ||||||| |||||||    
T  86898 tactgttttggtcttctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtcca 86968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 41348257 - 41348325
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  41348257 ttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttgatcccataagtctt 41348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 41349627 - 41349570
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  41349627 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaattt 41349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 295 - 476
Target Start/End: Original strand, 43894098 - 43894279
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||||||| |  | ||||||||||||||||   ||||||||||| |||| ||||||| || ||| ||||||| |||  |||| | || | | |    
T  43894098 ttggcttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctg 43894197  T
Q  395 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcc 476  Q
    ||   | |||| ||||| || ||| ||||| |||||||||| ||| |||||||||||||||||||||||||||  |||||||    
T  43894198 ttacctcttttggtcatatccgttggtttttaacatcaaatgtctgaggtgaaccatatttaaagatggtccacaatatgcc 43894279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 450
Target Start/End: Original strand, 17319059 - 17319190
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 418  Q
    |||||||||||||| ||| ||||||||||| ||||||||| |||||| ||||||| || | |||| |||| || |||||| | |||| ||| || | |||    
T  17319059 cttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtcttcaccgtt 17319158  T
Q  419 agttttgaacatcaaatatctaaggtgaacca 450  Q
    |||||| ||| | |||| ||||||||||||||    
T  17319159 agtttttaaccttaaatgtctaaggtgaacca 17319190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 293 - 379
Target Start/End: Original strand, 11482787 - 11482873
Alignment:
Q  293 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||||  |  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||| |||||    
T  11482787 ttttggcttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11482873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 290 - 396
Target Start/End: Complemental strand, 43419503 - 43419397
Alignment:
Q  290 attttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctta 389  Q
    |||||| ||||||||||||||  |  ||||||||||||||||||||| |||||||  |||||||||||| |||||| ||||||| ||||  ||| ||||     
T  43419503 atttttcggcttaatacatctcccggtcccttaacttattttattttctcagtttcgtcccttaactataaagtgtctcaatttggtcccttaactcttc 43419404  T
Q  390 tgccgtt 396  Q
    |||||||    
T  43419403 tgccgtt 43419397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 316 - 450
Target Start/End: Original strand, 50530517 - 50530651
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||  | |||| |||| |||| |  |||||| | |||| ||||| |||    
T  50530517 tcccttaacttattttattttctcagtttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttct 50530616  T
Q  416 gttagttttgaacatcaaatatctaaggtgaacca 450  Q
    |||| |||| ||| | |||  ||||||||||||||    
T  50530617 gttaatttttaaccttaaaagtctaaggtgaacca 50530651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 56000301 - 56000383
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||||||||||||| |||| |||||||||    
T  56000301 tcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgttta 56000383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 5417299 - 5417375
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||| |   ||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||    
T  5417299 ggcttaatacatctcttggtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaattt 5417375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 44128455 - 44128331
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||| ||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  44128455 ggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtt 44128356  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    || | |||| ||| |||| ||||||    
T  44128355 tactattttggtcctctccgttagt 44128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 472
Target Start/End: Original strand, 35787815 - 35787966
Alignment:
Q  321 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttag 420  Q
    |||||||||||   |||||| |||| |||  ||||||| || ||| ||||||| |||| |||| |||| || ||||||  ||||| ||| |||| |||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtcctctccgttag 35787914  T
Q  421 ttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||| |||||||||| |||||||| || ||| ||||||| ||||||| ||||    
T  35787915 tttttaacatcaaatgtctaaggtaaatcatgtttaaaggtggtccaccata 35787966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 297 - 467
Target Start/End: Complemental strand, 6616332 - 6616162
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| |||| || ||||  ||  | || || ||||    
T  6616332 ggcttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtt 6616233  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    ||||||||| ||| ||||  |||||||| |||||||||| || ||||||||| ||  |||||||| |||||    
T  6616232 tattgttttggtcctctcctttagtttttaacatcaaatgtcaaaggtgaacaatgattaaagatagtcca 6616162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 287 - 421
Target Start/End: Complemental strand, 33377495 - 33377361
Alignment:
Q  287 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 386  Q
    ||||| ||| ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| ||    
T  33377495 ataatctttaggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatc 33377396  T
Q  387 ttatgccgtttattgttttagtcatctctgttagt 421  Q
    || ||||||||| | |||| ||| |||| ||||||    
T  33377395 ttctgccgtttactattttggtcctctccgttagt 33377361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 757
Target Start/End: Original strand, 43894433 - 43894582
Alignment:
Q  613 atcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcg 707  Q
    ||||| ||||||||||||||| |||||||| ||||||| ||||||  |     |||| ||||| || | ||||||||| |||||| ||||||| |||||     
T  43894433 atcttcaacaacaacttcatccataaaatccagaaaattccaaaaaaataaaaataaataaacatattctttaatcactacacaatcatcattgtcatct 43894532  T
Q  708 tcatctataatcattaacaccattcttcttaaatattattcttcatcttc 757  Q
    ||||||||  | || ||| |  |||||| |||||||||||||||||||||    
T  43894533 tcatctatcgttatcaacgctcttcttcctaaatattattcttcatcttc 43894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 448
Target Start/End: Complemental strand, 30683129 - 30682997
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||| |||||||   |||||| |||| |||||||||||| |||||| ||||||| |||| |||| ||||  |||||| ||| |||| ||| ||||     
T  30683129 tcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggccgttaattcttttggtcttctcc 30683030  T
Q  416 gttagttttgaacatcaaatatctaaggtgaac 448  Q
    ||||||||| ||||  |||||| |||| |||||    
T  30683029 gttagtttttaacaataaatatttaagatgaac 30682997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 295 - 398
Target Start/End: Original strand, 52658904 - 52659007
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    |||||||||||||| |||   |||||||||||||||| | |||||| |||| |||| ||||||| || ||| ||||||| || |||||| |||| |||||    
T  52658904 ttggcttaatacatgttttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccg 52659003  T
Q  395 ttta 398  Q
    ||||    
T  52659004 ttta 52659007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 398
Target Start/End: Complemental strand, 28103612 - 28103506
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    |||||||||||| ||||| ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| ||||| ||| ||    
T  28103612 tttttggcttaacacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctg 28103513  T
Q  392 ccgttta 398  Q
    |||||||    
T  28103512 ccgttta 28103506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 2293532 - 2293464
Alignment:
Q  411 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||||||||| || ||||||| ||| | ||||| ||||||||||||||||||| |||||||||||    
T  2293532 tctccgttagtttttaaaatcaaatgtctgaagtgaatcatatttaaagatggtccaccatatgcctta 2293464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 43418028 - 43418104
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||   || ||| |||| |||||||||||| |||||||| |||||||||||| |||||| |||||||    
T  43418028 ggcttaatacatcccccagtcctttaaattattttattttctcagtttggtcccttaactataaagtgtttcaattt 43418104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 295 - 450
Target Start/End: Complemental strand, 11115103 - 11114948
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||| | ||||||| |||| |||| |||| || ||    
T  11115103 ttggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcg 11115004  T
Q  395 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||||   |||| | | |||| ||||||||| ||| | |||| |||||| |||||||    
T  11115003 tttaccattttggacctctccgttagtttttaaccttaaatgtctaagctgaacca 11114948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 728
Target Start/End: Original strand, 18091866 - 18091929
Alignment:
Q  665 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||||||||| |||| |||||||||  |||| |||||||| ||||| ||||||    
T  18091866 ttaaacctactatttaatcactacaccaccatcattgacatcttcatctatcatcatcaacacc 18091929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 26045146 - 26045209
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||  || |||||||||||||    
T  26045146 tcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttagtcct 26045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 26393254 - 26393147
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||| |||||||||  ||   |||||||||||||||| | |||| | |||||||| |||||||| |||||| ||||||| |||| |||| |||| |    
T  26393254 ttttttggtttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttct 26393155  T
Q  391 gccgttta 398  Q
    | ||||||    
T  26393154 gtcgttta 26393147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 37560433 - 37560319
Alignment:
Q  284 ataataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    |||||| ||||  ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||    
T  37560433 ataatagttttaaggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 37560334  T
Q  384 gtcttatgccgttta 398  Q
     ||||| | ||||||    
T  37560333 atcttacgacgttta 37560319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 602
Target Start/End: Original strand, 43894331 - 43894405
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc 602  Q
    |||||||  |||||| |||||||||||||| ||| ||||||||||| ||||   ||||||||||| |||||||||    
T  43894331 gttgaattttgtagggtctattgtactttagtgtcaaccactaacatctaataaaatccattcatcttcttcttc 43894405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 294 - 384
Target Start/End: Complemental strand, 56001392 - 56001302
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataag 384  Q
    |||||||||||||||  ||   |||||||||||||||| | |||||| ||||  ||| ||||||| |||||| ||||||| ||||||||||    
T  56001392 tttggcttaatacatgctttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataag 56001302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 29663638 - 29663738
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | |||||||| |||||||   |||||| ||||||||| ||||||| || ||| ||||||| |||| |||| |||| |||||||    
T  29663638 ggcttaatacatcctttaatcccttaatttatttttggttttcattttgatccc-taactataaattgtctcaatttggtcccataactcttctgccgtt 29663736  T
Q  397 ta 398  Q
    ||    
T  29663737 ta 29663738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 29687994 - 29687929
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    |||| ||||||||  |||||||| |||||||||| |||| || ||||||||||||||| |||||||    
T  29687994 ttttggtcatctcctttagtttttaacatcaaatgtctacggcgaaccatatttaaaggtggtcca 29687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 31711087 - 31711188
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||    ||||| |||| ||| |||||||| |||||| ||||||| |||  |||||||||||| ||||    
T  31711087 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtt 31711186  T
Q  397 ta 398  Q
    ||    
T  31711187 ta 31711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 36604857 - 36604780
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||| |||| ||||||||| || |||||||||||||| ||||||||||| |||  ||| ||| |||||||||||    
T  36604857 ttttggtcctctccgttagtttttaatatcaaatatctaagatgaaccatattaaaaagtggcccaccatatgcctta 36604780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 353
Target Start/End: Complemental strand, 44160536 - 44160475
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatccctta 353  Q
    |||| ||||||||||||| | |  ||||||||||||||||||||| |||||||| |||||||    
T  44160536 ttttaggcttaatacatcctccggtcccttaacttattttattttctcagtttggtccctta 44160475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 47242966 - 47243011
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  47242966 tcccttaacttattttaatttctcagtttaatcccttaactattaa 47243011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 419
Target Start/End: Original strand, 5687220 - 5687292
Alignment:
Q  347 tcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| |||||||| ||||    
T  5687220 tcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 396
Target Start/End: Original strand, 29686250 - 29686350
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 395  Q
    |||||||||||||| || | ||||||||||||||||   |||||| |||| |||||||||||| || ||| |||| || ||||  || |||||||| |||    
T  29686250 tggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgt 29686349  T
Q  396 t 396  Q
    |    
T  29686350 t 29686350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 357
Target Start/End: Complemental strand, 38371926 - 38371866
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    ||||||||||||| |||  || ||||||||||||| | |||||||||||||||| ||||||    
T  38371926 ggcttaatacatcattcggtctcttaacttattttctgttttcagtttgatcccctaacta 38371866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 43708825 - 43708913
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||||||||||||||   |  || |||||||||||||| ||| |||||||  ||| ||||||||||| ||| ||||||| |||||    
T  43708825 ttttttggcttaatacatcccccggtctcttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcct 43708913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 424
Target Start/End: Complemental strand, 44305077 - 44304973
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    |||||||||||| | |||||| |||| |||| ||||||  |||||| ||||||| ||||||||| ||||  || ||||| | |||| |||||||| ||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgtta 44304978  T
Q  420 gtttt 424  Q
     ||||    
T  44304977 atttt 44304973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 11113737 - 11113864
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   || |||||||||||||   |||||| |||  |||||||||||| |||||| ||||||| |||  |||| |||| |||||||    
T  11113737 ggcttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtt 11113836  T
Q  397 tattgttttagtcatctctgttagtttt 424  Q
    ||   |||| ||||| || |||||||||    
T  11113837 taccattttggtcatttccgttagtttt 11113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 399
Target Start/End: Original strand, 15786942 - 15787049
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    |||| ||||||||||||| ||   ||| |||||||||||| | |||||| |||| |||| ||||||| || ||| ||||||| |||| |||| | || ||    
T  15786942 ttttaggcttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctg 15787041  T
Q  392 ccgtttat 399  Q
    ||||||||    
T  15787042 ccgtttat 15787049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 447
Target Start/End: Original strand, 17494145 - 17494272
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    |||| |||||||| ||| ||| |||| ||||||||||||||||||| | ||||| |||   || ||||||||||||||| | | || || ||||| ||||    
T  17494145 ttaatttattttaatttctcattttggtcccttaactattaagtgttttaatttggtctcttatgtcttatgccgtttactatattggttatctccgtta 17494244  T
Q  420 gttttgaacatcaaatatctaaggtgaa 447  Q
     |||| ||| | |||| ||||| |||||    
T  17494245 ctttttaaccttaaatgtctaacgtgaa 17494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 388
Target Start/End: Complemental strand, 46796147 - 46796056
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||| ||   ||||||||||||||||   |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||    
T  46796147 ggcttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 46796056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 47572600 - 47572663
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| |||| ||  ||||||||||||||| ||| ||||||| |||||    
T  47572600 tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtcct 47572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 96804 - 96734
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgt 365  Q
    ||||||||||||||  ||   |||||||||||||||||| |||||| |||| |||| ||||||| ||||||    
T  96804 ttggcttaatacattgtttggtcccttaacttattttatgttttcactttggtcccctaactataaagtgt 96734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 50496990 - 50497072
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||| | || ||||| ||||||||||| ||| |||||||  | ||||||||||||| ||| | ||||| |||||    
T  50496990 ggcttaatacatcctccagtccctcaacttattttaatttctcagtttagttccttaactattaaatgttttaatttggtcct 50497072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 55953954 - 55953872
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| || ||| ||||||| ||||  ||| ||||||||||||||    
T  55953954 tcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 55953872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 397
Target Start/End: Complemental strand, 1273534 - 1273454
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    ||||||||||||||||   |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||||| |||||    
T  1273534 tcccttaacttatttttggttttaa-tttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgttt 1273454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 47573746 - 47573701
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||    
T  47573746 tcccttaacttattttaatttctcagtgtggtcccttaactattaa 47573701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 5e-55; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 532 - 757
Target Start/End: Original strand, 14764459 - 14764677
Alignment:
Q  532 aatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaacttca 631  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||   |||| ||||||| || ||||||| |||||||||||||    
T  14764459 aatcatgtagggtctattgcactttactgtgaaccactaacacctaagttaatccattca---tctttttcttccatcatcatcttcaacaacaacttca 14764555  T
Q  632 tcaataaaatctagaaaatcccaaaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacaccatt 731  Q
    |||||||| || |||||||||||||| || ||||||||||| ||||||||| ||||||||||||||    | ||| |||||||| ||||| |||| | ||    
T  14764556 tcaataaactccagaaaatcccaaaaatattaattaaaccttctatttaat-accacacaaccatc---gtgatcttcatctatcatcatcaacatcctt 14764651  T
Q  732 cttcttaaatattattcttcatcttc 757  Q
    |||| |||||||| ||||||||||||    
T  14764652 cttcctaaatattcttcttcatcttc 14764677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 316 - 483
Target Start/End: Original strand, 14764243 - 14764410
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||| |||  ||||||||| || |||||| ||||||||||||||||    
T  14764243 tcccttaacttattttatttttttagtttgatcccttaattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatctct 14764342  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    ||||||||| ||||| |||| | ||||||||||| ||||||||| ||||||| |||| ||| ||||||    
T  14764343 gttagtttttaacattaaatgtttaaggtgaaccttatttaaaggtggtccaccatacgccatactaa 14764410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 293 - 472
Target Start/End: Complemental strand, 49141621 - 49141442
Alignment:
Q  293 ttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgc 392  Q
    ||||||||||||||||| ||   ||| |||| |||||||   |||||| || ||||||||||||||||||||| |||| || |||| |||| | || |||    
T  49141621 ttttggcttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgc 49141522  T
Q  393 cgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||   ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| || |||| ||||    
T  49141521 cgtttaccattttagtcatctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaagttgttccaccata 49141442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 40110778 - 40110682
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||| |||||||||||||  ||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  40110778 ttttaggcttaatacatccctcgatcccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtcccataagtctt 40110682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 528 - 728
Target Start/End: Complemental strand, 51218855 - 51218651
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgtcatcttgaaca 622  Q
    |||||||||||| || ||||||||||||| |||||||||||| ||||||||   |||| |||||| |||||||||     |  | |||| ||||| ||||    
T  51218855 gttgaatcatgtggggtctattgtactttcctgtgaaccactcacacctaataaaatcgattcatcttcttcttccctcatctcttcgtgatcttcaaca 51218756  T
Q  623 acaacttcatcaataaaatctagaaaatccca--aaactaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatca 720  Q
    |||||||||||| ||||||| |||||||||||  ||| ||| ||||   |||||| |||||||| ||||||||||||||| ||||| |||||||| | ||    
T  51218755 acaacttcatcagtaaaatccagaaaatcccacaaaaataaaaatt---cctactctttaatcatcacacaaccatcattgtcatcttcatctatcagca 51218659  T
Q  721 ttaacacc 728  Q
    | ||||||    
T  51218658 tcaacacc 51218651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 299 - 424
Target Start/End: Original strand, 40811192 - 40811317
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||  ||  |||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||  ||| |||| |||| |||||||||    
T  40811192 cttaatacatccctcggtcccttaacttattctattttctcagtttgatcccttaactattaaatgtctcaatttgatcccataactcttttgccgttta 40811291  T
Q  399 ttgttttagtcatctctgttagtttt 424  Q
    || |||| |||||||| |||||||||    
T  40811292 ttattttggtcatctccgttagtttt 40811317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 26801933 - 26802029
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||||||||||||||||| | |  || |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  26801933 tttttggcttaatacatcctccggtctcttagcttattttattttttcagtttgatcccttaactattaagtgtgtaaatttagtctcataagtctt 26802029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 291 - 450
Target Start/End: Original strand, 14169608 - 14169767
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||| ||||||||||||    || ||||||||||||||||||||| |||||||| ||| |||||||| || ||| ||||||| |||| |||| |||| |    
T  14169608 tttttaggcttaatacattccccagtcccttaacttattttattttctcagtttggtcctttaactataaaatgtctcaatttggtcccataaatctttt 14169707  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    | |||||| | |||| ||| | |||||||||||| ||| | |||| ||||||||||||||    
T  14169708 gtcgtttactattttggtcttatctgttagtttttaaccttaaatgtctaaggtgaacca 14169767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 297 - 424
Target Start/End: Complemental strand, 36511452 - 36511325
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    |||||||||||||   || |||||||| |||||||||||| |||||||| |||||||||||| |||||| ||||||| |||| |||| |||| || ||||    
T  36511452 ggcttaatacatcccccagtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtt 36511353  T
Q  397 tattgttttagtcatctctgttagtttt 424  Q
    || | |||| |||||||| |||||||||    
T  36511352 tactattttggtcatctccgttagtttt 36511325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 287 - 424
Target Start/End: Original strand, 22167764 - 22167901
Alignment:
Q  287 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 386  Q
    ||||||||  |||||||||||||    | ||||||||||||||||| ||| |||||||  |||||||| |||||||||| ||||||| |||| |||| ||    
T  22167764 ataattttaaggcttaatacatcccctaatcccttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcccataaatc 22167863  T
Q  387 ttatgccgtttattgttttagtcatctctgttagtttt 424  Q
    || ||||||||||| |||| ||  ||||||||||||||    
T  22167864 ttctgccgtttattattttggttctctctgttagtttt 22167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 36509825 - 36509954
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||| || | |||| |||| ||||||||| | |||| ||  ||||     
T  36509825 tcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctcc 36509924  T
Q  416 gttagttttgaacatcaaatatctaaggtg 445  Q
    ||||||||| ||| |||||| |||| ||||    
T  36509925 gttagtttttaacctcaaatgtctatggtg 36509954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 467
Target Start/End: Original strand, 44977213 - 44977386
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    |||||||||||||||  ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| | ||  | ||||  || ||||| ||||    
T  44977213 tttggcttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgcc 44977312  T
Q  394 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    |||   |  ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  44977313 gttacctcatttggtcatctctgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtcca 44977386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 291 - 472
Target Start/End: Complemental strand, 51726971 - 51726790
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||| ||||||||||||   |  ||||||||||||||||||||| |||||||| ||  |||||||| |||||| ||||||| || | |||| |||| |    
T  51726971 tttttttgcttaatacatcccccggtcccttaacttattttattttctcagtttggtcatttaactataaagtgtctcaatttggttccataaatcttct 51726872  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    | |||||| | |||||||| || | ||||||||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  51726871 gtcgtttactattttagtcctcaccgttagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 51726790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 320 - 472
Target Start/End: Original strand, 9633793 - 9633945
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    ||||||||||||   |||||| |||| |||||||||||| |||||| ||||||| ||  ||||| ||||   |||||||  |||||  || |||| ||||    
T  9633793 ttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttacagttttgatcctctccgtta 9633892  T
Q  420 gttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  9633893 gtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 9633945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 24516348 - 24516420
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||  |||||||||    
T  24516348 tcccttaacttattttattttctgagtttgatcccttaactattaagtgtgtcaatttggtctcataagtctt 24516420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 40109375 - 40109447
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||    
T  40109375 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatctt 40109447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 292 - 464
Target Start/End: Complemental strand, 52743102 - 52742930
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    |||||||||||||||||| ||   ||||||| ||||||||   |||||| |||| |||| ||||||| |||||| |||| || ||||  || || |||||    
T  52743102 tttttggcttaatacatcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatg 52743003  T
Q  392 ccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
     |||||| |||| | ||| |||| ||||||||| |||||||||| | ||||||||||||| ||||||| ||||    
T  52743002 tcgtttactgttatggtcctctccgttagtttttaacatcaaatgtttaaggtgaaccatgtttaaaggtggt 52742930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 472
Target Start/End: Original strand, 8092593 - 8092768
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||||  |  ||||||||||||||||||||| ||||| |  ||||||||||||||||||| ||||||| || | |||| ||||   |||||    
T  8092593 ggcttaatacatctcccggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtatcaatttggttccataaatcttcctccgtt 8092692  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || || ||| ||| | || |||||| || ||| | |||||||||||||||||||  |||| || ||||||| ||||    
T  8092693 tactgatttggtcctttccgttagtatttaaccttaaatatctaaggtgaaccaactttataggtggtccaccata 8092768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 26803318 - 26803261
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  26803318 tcccttaacttattttattttctcagtttgatctcttaactattaagtgtgtcaattt 26803261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 25785963 - 25786087
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| ||||||| ||||    
T  25785963 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtt 25786062  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    |||| |||| ||| |||||||||||    
T  25786063 tattattttggtcctctctgttagt 25786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 464
Target Start/End: Complemental strand, 26056249 - 26056101
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| || |||||| | |||| ||| ||||     
T  26056249 tcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctcc 26056150  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||||| ||| |||||||||  ||||| ||||||||||||||||| ||||    
T  26056149 gttagattttaacatcaaaagtctaaagtgaaccatatttaaaggtggt 26056101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 51218973 - 51218905
Alignment:
Q  411 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||    
T  51218973 tctccgttagtttttaacatcaaatgtctaaagtgaaccatatttaaagatggtccaccatatgcctta 51218905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 320 - 383
Target Start/End: Complemental strand, 14765192 - 14765129
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||||    
T  14765192 ttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataa 14765129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 291 - 424
Target Start/End: Complemental strand, 40812736 - 40812605
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||||||||||||||   |  |||||||||||||||||||||   |||||| ||||||||||||||||||| ||||||| ||  ||||| |||| |    
T  40812736 ttttttggcttaatacatcc--cggtcccttaacttattttattttcctagtttggtcccttaactattaagtgtctcaatttggttatataactcttct 40812639  T
Q  391 gccgtttattgttttagtcatctctgttagtttt 424  Q
    ||| |||| | |||| ||| | ||||||||||||    
T  40812638 gccatttactattttggtcttttctgttagtttt 40812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 24517716 - 24517644
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||| |||| |||| ||||    
T  24517716 tcccttaacttattttattttctcagtttaatcccttaatttttaagtgtgtcaatttggtcccataaatctt 24517644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 316 - 450
Target Start/End: Complemental strand, 2973110 - 2972976
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||||||||||| | |||||| |||  |||||||| ||| |||||| ||||||| |||||||||||||||  ||||||| |  | | ||| | |||    
T  2973110 tcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtcttaccccgtttactagtgtggtcctttct 2973011  T
Q  416 gttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||||||||| ||| | |||| ||||||||| ||||    
T  2973010 gttagtttttaactttaaatgtctaaggtgtacca 2972976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 321 - 423
Target Start/End: Original strand, 19464619 - 19464721
Alignment:
Q  321 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttag 420  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||| ||||||| || | | || |||| ||||||||| | |||| ||||||||  ||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatctccattag 19464718  T
Q  421 ttt 423  Q
    |||    
T  19464719 ttt 19464721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 38283841 - 38283775
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctata 382  Q
    |||||||||||||||||||||||||||||  |||  || ||||||||||||||||||| ||||||||    
T  38283841 tcccttaacttattttattttttcagtttagtcctctatctattaagtgtgtcaatttggtcctata 38283775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 445
Target Start/End: Complemental strand, 19466307 - 19466178
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||| |||||||||||||| |||||||| ||| |||||||| |||||| ||||||| |||| |||| |||| || |||||| | || | ||  ||||     
T  19466307 tccctttacttattttattttctcagtttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctcc 19466208  T
Q  416 gttagttttgaacatcaaatatctaaggtg 445  Q
    ||||||||| ||| |||||| |||| ||||    
T  19466207 gttagtttttaacctcaaatgtctatggtg 19466178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 578
Target Start/End: Complemental strand, 26056040 - 26055987
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  26056040 accgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaa 26055987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 398
Target Start/End: Complemental strand, 47411581 - 47411468
Alignment:
Q  285 taataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataag 384  Q
    |||||| |||||||||||||||||| ||   ||||||||||||||||   |||||  |||| | || ||||||| |||||| ||||||| |||| ||||     
T  47411581 taataaatttttggcttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaa 47411482  T
Q  385 tcttatgccgttta 398  Q
    ||||||||||||||    
T  47411481 tcttatgccgttta 47411468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 424
Target Start/End: Original strand, 13641271 - 13641379
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||||||||     
T  13641271 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctcc 13641370  T
Q  416 gttagtttt 424  Q
    |||| ||||    
T  13641371 gttattttt 13641379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 464
Target Start/End: Original strand, 50678380 - 50678525
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| ||||||||||||||||| || ||| ||||||| | ||| ||| |||  |||||||   | |||| ||| |||||    
T  50678380 tcccttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttgg-cct-taaatctc-tgccgttacctcttttggtcctctct 50678476  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| ||||    
T  50678477 gttagtttttaacatcaaaactctaaggtgaaccatatttaaaggtggt 50678525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 578
Target Start/End: Complemental strand, 37624460 - 37624410
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  37624460 gttgaatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 37624410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 300 - 357
Target Start/End: Complemental strand, 22169337 - 22169280
Alignment:
Q  300 ttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    |||||||||||  || ||||||||||||||||| ||| ||||||||||||||||||||    
T  22169337 ttaatacatctcccagtcccttaacttattttaatttctcagtttgatcccttaacta 22169280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 420
Target Start/End: Complemental strand, 3979415 - 3979311
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||| ||||     
T  3979415 tcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctcc 3979316  T
Q  416 gttag 420  Q
    |||||    
T  3979315 gttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 25787285 - 25787161
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||  |||| ||||||||| ||    
T  25787285 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatt 25787186  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    || | |||| ||| |||| ||||||    
T  25787185 tactattttggtcctctccgttagt 25787161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 43808642 - 43808578
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||| |||  ||||||||||||||||| ||| ||||| || |||||||||||||||    
T  43808642 ggcttaatacatccttcggtcccttaacttattttaatttctcagtgtggtcccttaactattaa 43808578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 416 - 467
Target Start/End: Complemental strand, 22766822 - 22766771
Alignment:
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| |||||||    
T  22766822 gttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtcca 22766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 416 - 467
Target Start/End: Complemental strand, 23082128 - 23082077
Alignment:
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||| |||||||    
T  23082128 gttagtttttaacaccaaatatctaaagtgaaccatatttaaaggtggtcca 23082077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 298 - 373
Target Start/End: Original strand, 38280846 - 38280921
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||| | |  ||| |||| |||||||||||| |||||||| ||| ||||||||||| |||||||||||    
T  38280846 gcttaatacatcctccggtcctttaagttattttattttctcagtttggtccattaactattaattgtgtcaattt 38280921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 424
Target Start/End: Original strand, 47560134 - 47560261
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||| ||||||||   |||||| |||| |||| ||||||| |||||| |||||||  |||| ||| | || |||||||    
T  47560134 ggcttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtt 47560233  T
Q  397 tattgttttagtcatctctgttagtttt 424  Q
    || |||||| |||||||| |||| ||||    
T  47560234 tactgttttggtcatctccgttaatttt 47560261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 728
Target Start/End: Original strand, 52759649 - 52759712
Alignment:
Q  665 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||||||||| |||| |||||||||  |||| |||||||| ||||| ||||||    
T  52759649 ttaaacctactatttaatcactacaccaccatcattgacatcttcatctatcatcatcaacacc 52759712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 13930777 - 13930695
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| |||||||||||| ||||||    
T  13930777 tcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgttta 13930695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 21246594 - 21246532
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||  |  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  21246594 cttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaactattaa 21246532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 578
Target Start/End: Original strand, 27689513 - 27689563
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||||    
T  27689513 gttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 27689563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 578
Target Start/End: Complemental strand, 30551479 - 30551429
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||| |||||||||| ||||||||| |||| ||||||||||||||||||||    
T  30551479 gttggatcatgtagggtctattgtattttagtgtgaaccactaacacctaa 30551429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 38451545 - 38451611
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||| ||   |||||||||||||||||| |||||| |||| |||| ||||||||||    
T  38451545 ttggcttaatacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactattaa 38451611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 44979430 - 44979512
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||| || | |||||||||||||||| | |||||| |||| || ||||||||| |||||| |||| || |||||    
T  44979430 ggcttaatacatcatttaatcccttaacttattttttgttttcactttggtctcttaactataaagtgtctcaaattggtcct 44979512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 291 - 472
Target Start/End: Original strand, 21276983 - 21277164
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||||||||||||||||  ||   ||||||||||||||||   |||||| |||| |  | ||||||| |||| | ||||||| |||| |||| |||| |    
T  21276983 ttttttggcttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttct 21277082  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||||||| | ||||  || ||||  ||||||||  || | |||| ||||||||||||||  |||| || ||||||| ||||    
T  21277083 gccgtttactattttgatcctctccattagtttttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 21277164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 467
Target Start/End: Original strand, 27689383 - 27689448
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    |||| ||| |||| ||||||||| |||| ||||| ||||| ||||||||||||||||| |||||||    
T  27689383 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggtcca 27689448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 399
Target Start/End: Original strand, 13929292 - 13929392
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||| ||   ||||||||||||||||   |||||| |||| |||||||||||| |||||| ||||||| ||||  ||| |||| | |||||||    
T  13929292 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgttta 13929391  T
Q  399 t 399  Q
    |    
T  13929392 t 13929392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 728
Target Start/End: Original strand, 17244467 - 17244527
Alignment:
Q  668 aacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    |||||||||||||||||| |||  ||||||||| ||||| |||||||| ||||| ||||||    
T  17244467 aacctactatttaatcactacatcaccatcattgtcatcttcatctatcatcatcaacacc 17244527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 50679923 - 50679851
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||   |||| | |||| |||||||||||| |||||| ||||||| |||| |||||||||    
T  50679923 tcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtctt 50679851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 48934234 - 48934317
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 378  Q
    |||||||||||||| ||| | ||||||||||||||||    ||||| |||| |||| ||||||| |||||| ||||||| ||||    
T  48934234 ttggcttaatacatgttttaatcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcc 48934317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 578
Target Start/End: Original strand, 50678599 - 50678638
Alignment:
Q  539 taggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  50678599 tagggtctattgtactttactgtgaacgactaacacctaa 50678638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 51725357 - 51725424
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    ||||||||||||||||| ||| |||||||  ||| |||||||| |||||| |||||||  ||||||||    
T  51725357 tcccttaacttattttaatttctcagtttagtcctttaactataaagtgtctcaatttgatcctataa 51725424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 320 - 419
Target Start/End: Complemental strand, 52181403 - 52181304
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    |||||||||||| | |||||| |||| |||  ||||||| |||||| |||||||||||  |||| |||||||  ||||| | |||| |||||||| ||||    
T  52181403 ttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtcatctccgtta 52181304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 727
Target Start/End: Complemental strand, 7111316 - 7111254
Alignment:
Q  665 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 727  Q
    ||||||| | ||||||||||| |||| ||||||||| ||||| |||||||| ||||| |||||    
T  7111316 ttaaaccaattatttaatcactacaccaccatcattgtcatcttcatctatcatcatcaacac 7111254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 30551605 - 30551543
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    |||| |||||||| ||||||||| | |||||||| ||||| |||||||||||| |||| ||||    
T  30551605 ttttggtcatctccgttagtttttagcatcaaatgtctaaagtgaaccatattaaaaggtggt 30551543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 30743082 - 30743164
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||  |  ||| ||||||||||||| ||| ||| | || ||||||||||||||| ||| ||||||| |||||    
T  30743082 ggcttaatacatctcccggtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtcct 30743164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 370
Target Start/End: Original strand, 45042627 - 45042677
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaa 370  Q
    |||| |||||||||||| ||||||||||||||||||| |||| ||| ||||    
T  45042627 ttaatttattttattttctcagtttgatcccttaactgttaaatgtttcaa 45042677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 398
Target Start/End: Complemental strand, 14071324 - 14071223
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||| |||||||   |||||| |||| |||  ||||||| |||||| ||||||| |||| ||||||||| || ||||    
T  14071324 ggcttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtt 14071225  T
Q  397 ta 398  Q
    ||    
T  14071224 ta 14071223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 34653449 - 34653506
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||    
T  34653449 tcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaattt 34653506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 37624586 - 37624529
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaag 459  Q
    |||| ||| |||| ||||||||| |||||||||| ||||| |||||||||||| ||||    
T  37624586 ttttggtcctctccgttagtttttaacatcaaatgtctaaagtgaaccatattaaaag 37624529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 421
Target Start/End: Complemental strand, 47136813 - 47136684
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    |||| ||||||||||||| ||   ||| ||||||||||||   |||||| || | |||| ||||||| |||||| ||||||| ||   |||| |||||||    
T  47136813 ttttaggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatg 47136714  T
Q  392 ccgtttattgttttagtcatctctgttagt 421  Q
    ||||||| | |||| ||| |||| ||||||    
T  47136713 ccgtttactattttggtcctctccgttagt 47136684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 3e-47; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 561 - 757
Target Start/End: Original strand, 3532446 - 3532636
Alignment:
Q  561 tgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta 660  Q
    ||||||||||||||||||||||||||||| ||   ||| |||||||||| ||||||| ||||||||||||||||||||| || | |||||||||||| ||    
T  3532446 tgaaccactaacacctaagttaatccatttat---ctttttcttccctcatcatcttcaacaacaacttcatcaataaactccataaaatcccaaaaata 3532542  T
Q  661 ataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacaccattcttcttaaatattattcttcatcttc 757  Q
    |||||||||||||||||||||| ||||||||||   |||||||||| ||||| || ||||| |||| |  ||||| |||||||| ||||||||||||    
T  3532543 ataattaaacctactatttaataaccacacaac---cattatcatcttcatcaatcatcatcaacatccctcttcctaaatattcttcttcatcttc 3532636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 316 - 483
Target Start/End: Original strand, 3532208 - 3532375
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||| || | |||| | ||||||||||||||    
T  3532208 tcccttaatttattttattttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatctct 3532307  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |||  |||| ||||| |||| | ||||||||||||||||||||| ||||||| ||||||| |||||||    
T  3532308 gttgatttttaacattaaatgtttaaggtgaaccatatttaaaggtggtccaccatatgcattactaa 3532375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 7983797 - 7983641
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||| | |      
T  7983797 tcccttaacttattttattttctcagtttaattccttaactattaagtgtgtcaatttggtcctataagtcttctaccgtttactgttttagtccttttc 7983698  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||| |||||||||| ||||||||||||||| ||||||| ||||||| ||||    
T  7983697 gtcaatttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccata 7983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 292 - 464
Target Start/End: Original strand, 23177663 - 23177836
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatccct-taactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||||||||||||| ||   |||||||| |||||||   |||||| |||| ||||  ||||||| |||||| ||||||| |||| |||| |||| |    
T  23177663 tttttggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttct 23177762  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||||||||   |||| ||| |||| ||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  23177763 gccgtttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggt 23177836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 292 - 464
Target Start/End: Original strand, 23588920 - 23589093
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatccct-taactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||||||||||||| ||   |||||||| |||||||   |||||| |||| ||||  ||||||| |||||| ||||||| |||| |||| |||| |    
T  23588920 tttttggcttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttct 23589019  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||||||||   |||| ||| |||| ||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  23589020 gccgtttaccattttggtcctctccgttagtttttaacataaaaaatctaagatgaaccatatttaaagatggt 23589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 14510607 - 14510514
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatct 413  Q
    ||||||||||||||||| | |||||  ||||||||||||||||||| ||||||| ||||||||| |||| ||||||||| | ||||||||||||    
T  14510607 ttaacttattttattttcttagtttagtcccttaactattaagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatct 14510514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 464
Target Start/End: Original strand, 12852920 - 12853048
Alignment:
Q  336 tttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaat 435  Q
    ||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| |  |||||| | |||| |||||||| ||||| ||| |||||||||     
T  12852920 tttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcatctccgttagattttaacatcaaaa 12853019  T
Q  436 atctaaggtgaaccatatttaaagatggt 464  Q
    |||||||||||||||||||||||| ||||    
T  12853020 atctaaggtgaaccatatttaaaggtggt 12853048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 294 - 373
Target Start/End: Original strand, 7982304 - 7982383
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||||||  |  ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  7982304 tttggcttaatacatctcccgatcctttaacttattttattttctcagtttgatcccttaactataaagtgtgtcaattt 7982383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 472
Target Start/End: Complemental strand, 25570991 - 25570816
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| |||  ||||||||||||||||||||| ||||| |  ||||||||||||||||||| |||||||  | | |||||||||   || ||    
T  25570991 ggcttaatacatccttcggtcccttaacttattttattttctcagtgtagtcccttaactattaagtgtttcaatttgattccataagtcttcctccatt 25570892  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||||||| | || ||||||||| ||  | |||| ||||||||||||||  |||| || ||||||| ||||    
T  25570891 tactattttagtcctttccgttagtttttaaacttaaatgtctaaggtgaaccaactttataggtggtccaccata 25570816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 29424714 - 29424558
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||| |  ||| |||| ||||||| |||||| ||||||| ||||  | | | || |||||||||||||||| ||| |||||    
T  29424714 tcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctctct 29424615  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||||||   |||||||||| |||||| |||||||| ||||||| ||||||| ||||    
T  29424614 gttagttactaacatcaaatgtctaagatgaaccatgtttaaaggtggtccatcata 29424558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 472
Target Start/End: Original strand, 14509204 - 14509379
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| | |  ||||||||||||||||||||| ||| |||| |||||||||||| |||||| | ||||  |||| |||| |||| || ||||    
T  14509204 ggcttaatacatcctccgatcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttctgtcgtt 14509303  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||| ||| |||| |||| |||| ||| | |||| |||||||| |||||  |||| || ||||||| ||||    
T  14509304 tactattttggtcctctccgttaatttttaaccttaaatgtctaaggtaaaccaactttataggtggtccaccata 14509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 3533724 - 3533646
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||  |||| |||| || ||||||    
T  3533724 ttaacttattttatttttttagtttggtcccttaactattaagtgtgtcaatttggtctcataaatcttttgtcgttta 3533646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 318 - 467
Target Start/End: Original strand, 10367255 - 10367404
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    ||||||||||||||   |||||| |||| |  ||||||||| |||||| |||||||||||  ||||||||| |||||||||   |||||||| |||| ||    
T  10367255 ccttaacttatttttgattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttagtcgtctccgt 10367354  T
Q  418 tagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    | ||||| ||| | |||| ||||||||||||||  |||| || |||||||    
T  10367355 ttgtttttaaccttaaatgtctaaggtgaaccaactttataggtggtcca 10367404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 14714592 - 14714669
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||| ||||||    
T  14714592 ttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatacgcctta 14714669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 602
Target Start/End: Original strand, 14714715 - 14714792
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc 602  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||||||   ||| ||||||| |||||||||    
T  14714715 accgttgaatcatgtagagtctattgtattttactgtgaaccactaacacctaataaaattcattcatcttcttcttc 14714792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 320 - 405
Target Start/End: Original strand, 25569787 - 25569872
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgtttt 405  Q
    ||||||||||||||||||| |||||| ||||||||||||||  ||||||||||| |||  |||||||||   ||||||||||||||    
T  25569787 ttaacttattttatttttttagtttggtcccttaactattacttgtgtcaatttggtcacataagtcttcctccgtttattgtttt 25569872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 316 - 449
Target Start/End: Original strand, 32614399 - 32614532
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||| ||||||||||||||||| |||| |||| ||||||| | |||| |||||||||| | |||| ||||||| ||||||   |||||||| ||||     
T  32614399 tcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgtttaccattttagtcctctcc 32614498  T
Q  416 gttagttttgaacatcaaatatctaaggtgaacc 449  Q
    ||| ||||| ||| | | || |||||||||||||    
T  32614499 gtttgtttttaaccttatatgtctaaggtgaacc 32614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 728
Target Start/End: Original strand, 14714902 - 14715095
Alignment:
Q  544 tctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc-----ttccctcgtcatcttgaacaacaacttcatcaataa 638  Q
    ||||||||| |||||||||||||||||||||||||   ||| ||||||| |||||||||     | || || | | ||| ||||||||||||||||||||    
T  14714902 tctattgtattttactgtgaaccactaacacctaataaaattcattcatcttcttcttccctcatcccttcatgaacttcaacaacaacttcatcaataa 14715001  T
Q  639 aatctagaaaatcccaaa--actaataat--taaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    |||| | ||||||| |||  | |||  ||  || || |||| ||||||||||| |||||||||||| ||||| | |||||| ||||| ||||||    
T  14715002 aatccaaaaaatcctaaatgaataaatattatacacatactctttaatcaccagacaaccatcattgtcatctttatctatcatcatcaacacc 14715095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 15850101 - 15850188
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 378  Q
    |||||||||||||| ||||   |  |||||||||||||||||||||||||||||| || ||||||||| |||||| ||||||| ||||    
T  15850101 ttttttggcttaatgcatcccccggtcccttaacttattttattttttcagtttggtctcttaactataaagtgtctcaatttggtcc 15850188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 467
Target Start/End: Complemental strand, 37869142 - 37868991
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||||||  ||||||||| || ||||||   |||| ||| ||||     
T  37869142 tcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctcc 37869043  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    ||| ||||| ||| | |||| |||||||||| |||  |||| || |||||||    
T  37869042 gtttgtttttaaccttaaatgtctaaggtgagccaactttataggtggtcca 37868991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 417 - 479
Target Start/End: Original strand, 4512221 - 4512283
Alignment:
Q  417 ttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||    
T  4512221 ttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgcctta 4512283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 578
Target Start/End: Original strand, 23177897 - 23177950
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  23177897 accgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaa 23177950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 578
Target Start/End: Original strand, 23589154 - 23589207
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| |||| || |||||||||||||||||||||||||||||||||||    
T  23589154 accgttgaattatgtcgggtctattgtactttactgtgaaccactaacacctaa 23589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 411 - 479
Target Start/End: Original strand, 26205122 - 26205190
Alignment:
Q  411 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||||||||| |||||||||| |||||||||||||||| |||||  ||||||| |||||||||||    
T  26205122 tctccgttagtttttaacatcaaatgtctaaggtgaaccatacttaaaagtggtccaccatatgcctta 26205190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 472
Target Start/End: Original strand, 4829460 - 4829635
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   | ||||||||||||||   |||||| |||  |||||||||||| || ||| |||||||  ||  |||| ||||||| ||||    
T  4829460 ggcttaatacatcatttgattccttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtt 4829559  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||| ||| ||||||||||| || ||| | ||||||||||||| |||||  |||| || ||||||| ||||    
T  4829560 tactattttggtcctctctgttagtgtttaaccttaaatatctaaggtaaaccaactttataggtggtccaccata 4829635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 447
Target Start/End: Original strand, 7036961 - 7037111
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||| ||||||||||||    ||||| |||  |||||||||||| |||||| ||||||| |||| ||||||||| |||||||    
T  7036961 ggcttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtt 7037060  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 447  Q
    ||   |||| ||||| || |||  |||| ||| | ||||||||||||||||    
T  7037061 taccattttggtcatttccgtttatttttaaccttaaatatctaaggtgaa 7037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 4512329 - 4512413
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtc 612  Q
    ||||||||||||||| || |||||| ||||||||||||||||| | ||||||||   |||| ||||||   |||||||||||||||||    
T  4512329 accgttgaatcatgtggggtctattatactttactgtgaaccattcacacctaataaaatcaattcat---cttcttcttccctcgtc 4512413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 578
Target Start/End: Complemental strand, 6708872 - 6708819
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| ||||||| ||||||| ||||| |||||||||||||||||||||    
T  6708872 accgttgaattatgtagggtctattgcactttcctgtgaaccactaacacctaa 6708819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 37867748 - 37867832
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 378  Q
    |||||||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| ||||    
T  37867748 tttggcttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcc 37867832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 33553467 - 33553404
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||  || ||||||| |||||    
T  33553467 tcccttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtcct 33553404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 299 - 378
Target Start/End: Complemental strand, 41796071 - 41795992
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 378  Q
    ||||||||||| || | ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| ||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcc 41795992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 448
Target Start/End: Complemental strand, 7490295 - 7490165
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    ||||||||||||||||||| |||||||| ||| |||| ||| || ||| ||||||| |||| |||| |||| |   ||||| | |||| ||| | || ||    
T  7490295 ccttaacttattttattttctcagtttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtcttatccgt 7490196  T
Q  418 tagttttgaacatcaaatatctaaggtgaac 448  Q
    ||||||| ||| | |||| ||||||||||||    
T  7490195 tagtttttaaccttaaatgtctaaggtgaac 7490165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 2581822 - 2581899
Alignment:
Q  321 taacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| |||| |||| ||||| ||||||||    
T  2581822 taacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgttta 2581899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 467
Target Start/End: Complemental strand, 12959805 - 12959656
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    ||||||||||||||   |||| | |||| ||||||||| || |||||| |||||||||||| |||| |||| |||||||||   ||||  || |||| ||    
T  12959805 ccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttacctttttgatcctctccgt 12959706  T
Q  418 tagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    | || || ||| | |||| ||||||||||||||  |||| || |||||||    
T  12959705 ttgtctttaaccttaaatgtctaaggtgaaccaactttataggtggtcca 12959656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 578
Target Start/End: Complemental strand, 41296339 - 41296294
Alignment:
Q  533 atcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||    
T  41296339 atcatgtaggatctattgtattttagtgtgaatcactaacacctaa 41296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 42596549 - 42596637
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||||| ||   ||||||||||||||||  ||||| | |||| |||| ||||||||||  || ||||||| |||||    
T  42596549 ttttttggcttaatacatcatttggtcccttaacttattttcgttttttattttggtcccctaactattaaacgtctcaatttggtcct 42596637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 467
Target Start/End: Original strand, 45047447 - 45047507
Alignment:
Q  407 gtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    ||||| || |||| |||| || ||||||| ||||||||||||||||||||||| |||||||    
T  45047447 gtcatttccgttaatttttaatatcaaatgtctaaggtgaaccatatttaaaggtggtcca 45047507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 20630773 - 20630710
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||| ||||||||||| ||| ||||||| ||||||||||||||||  || ||||||| |||||    
T  20630773 tccctaaacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtcct 20630710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 465
Target Start/End: Complemental strand, 21010514 - 21010451
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtc 465  Q
    |||| ||| |||||||||||| | |||||||||| ||||| ||||||| ||||||||| |||||    
T  21010514 ttttggtcctctctgttagttgttaacatcaaatgtctaatgtgaaccgtatttaaaggtggtc 21010451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 383
Target Start/End: Complemental strand, 7038453 - 7038367
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    ||||||||||||| ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| ||||    
T  7038453 ggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 8538748 - 8538686
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    |||||||||||||||   |  ||||||||||||||||||||| |||||||| || ||||||||    
T  8538748 ttggcttaatacatcaaccggtcccttaacttattttattttctcagtttggtctcttaacta 8538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 35801147 - 35801085
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 378  Q
    ||||||||||| |||| | |||||| ||| ||||||||||||| |||||| ||||||| ||||    
T  35801147 tcccttaacttgttttctattttcattttcatcccttaactataaagtgtttcaatttggtcc 35801085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 533 - 575
Target Start/End: Original strand, 45047625 - 45047667
Alignment:
Q  533 atcatgtaggatctattgtactttactgtgaaccactaacacc 575  Q
    |||||||||||||||||||  ||||||||||||||||| ||||    
T  45047625 atcatgtaggatctattgtgttttactgtgaaccactatcacc 45047667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 578
Target Start/End: Original strand, 12853113 - 12853162
Alignment:
Q  529 ttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||| ||||||  ||||||||||||| |||| ||||||||||||||||    
T  12853113 ttgaattatgtagagtctattgtactttcctgtcaaccactaacacctaa 12853162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 12854227 - 12854134
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||  ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| ||||    
T  12854227 ttggcttaatacatgctttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatctt 12854134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 15850761 - 15850704
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||||||| | |||||| ||| |||||||| || ||| |||||||    
T  15850761 tcccttaacttattttattttcttagtttgctcctttaactataaaatgtttcaattt 15850704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 41522790 - 41522634
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| | ||     
T  41522790 tcccttaacttattttattttctcagtttaatcatttaactattaagtgtgtcaatttggtcctataagtcttctgccgtttactgttttagtcctttcc 41522691  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||| |||||||||||| |||| |||||||| ||||||  ||||||||||||    
T  41522690 gtcaatttttaacatcaaatatttaagatgaaccatgtttaaaagtggtccagcata 41522634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 528 - 756
Target Start/End: Complemental strand, 39325723 - 39325493
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtcatcttgaacaacaac 627  Q
    |||| |||||||| || ||||||||||||||||||||||| ||||||||||   |||| |||||| ||||||||| ||  || || || ||| |  ||||    
T  39325723 gttggatcatgtacgacctattgtactttactgtgaaccattaacacctaataaaatctattcatcttcttcttcatca-tc-tcttcatgatcttcaac 39325626  T
Q  628 ttcatcaataaaatctagaaaatcccaaaact----aataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcatta 723  Q
     |||||||||||||  ||||||||||||||      |||||||||||||||  |||||||||||||||||||||||| ||||| |||||||| ||||| |    
T  39325625 atcatcaataaaattcagaaaatcccaaaaaataaaaataattaaacctaccttttaatcaccacacaaccatcattgtcatcttcatctatcatcatca 39325526  T
Q  724 acaccattcttcttaaatattattcttcatctt 756  Q
    ||||| |||||| ||||||||||||||||||||    
T  39325525 acacccttcttcctaaatattattcttcatctt 39325493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 298 - 464
Target Start/End: Complemental strand, 37276363 - 37276197
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   |||||||| |||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| |||| ||||||||    
T  37276363 gcttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgttt 37276264  T
Q  398 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||| | || ||| |||||||||||||| |||||||||  ||||||||||||||||||||||| ||||    
T  37276263 attatattggtcctctctgttagtttttaacatcaaaagtctaaggtgaaccatatttaaaggtggt 37276197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 525 - 737
Target Start/End: Complemental strand, 44103187 - 44102965
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttct----tcttc-cctcgtcatcttga 619  Q
    ||||||||||||||| || |||||||||||||| ||||||||||| ||||||||   ||||||||||| |||||||    || || | || | ||||| |    
T  44103187 accgttgaatcatgtggggtctattgtactttattgtgaaccactcacacctaataaaatccattcatcttcttctcccctcatctcttcatgatcttca 44103088  T
Q  620 acaacaacttcatcaataaaatctagaaaatcccaaa-----actaataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatcta 714  Q
    ||||||| ||||||||||||||| |||||||||||||     |  ||||||||  |||||| |||||||| |||| |||||||||| ||||| |||||||    
T  44103087 acaacaaattcatcaataaaatccagaaaatcccaaaaaaataaaaataattattcctactctttaatcatcacataaccatcattgtcatcttcatcta 44102988  T
Q  715 taatcattaacaccattcttctt 737  Q
    | ||||| |||||| | ||||||    
T  44102987 tcatcatcaacaccctccttctt 44102965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 2421395 - 2421239
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||| ||| |||||||  |||||||| |||||||||| ||||||| |||| | || |||| ||||||||||| |||| ||| ||| |    
T  2421395 tcccttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctcttt 2421296  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||||| ||| | |||| ||||||||||||||  |||| |||||||||| ||||    
T  2421295 gttagtttttaaccttaaatgtctaaggtgaaccaactttatagatggtccatcata 2421239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 292 - 467
Target Start/End: Complemental strand, 39546803 - 39546628
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    |||||||||||||||||| ||   | |||||||||||||| | |||||| |||| | || ||||| | |||||| ||||||| |||| |||| | |||||    
T  39546803 tttttggcttaatacatccttttgttccttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatg 39546704  T
Q  392 ccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    |||||||  ||||| |||||||| ||||||||| |||||||||| | |||| |||||||| ||||||| |||||||    
T  39546703 ccgtttaccgttttggtcatctccgttagtttttaacatcaaatgtttaagatgaaccatgtttaaaggtggtcca 39546628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 318 - 472
Target Start/End: Complemental strand, 13367150 - 13366996
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    ||||||||||||||||||||||| |||| |||||||||||| |||||| | ||||| |||| |||| |||| ||||||||| | |||| ||| |||| ||    
T  13367150 ccttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgt 13367051  T
Q  418 tagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  13367050 tagtttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 13366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 294 - 388
Target Start/End: Complemental strand, 22621258 - 22621164
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||  ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  22621258 tttggcttaatacatccctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtggcaatttggtcccataagtctt 22621164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 297 - 479
Target Start/End: Original strand, 36756059 - 36756241
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||| | |||| |||| ||||||| |||||| ||||| | |||  |||| ||||||| ||||    
T  36756059 ggcttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtt 36756158  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    || | |||| |||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| |||| || |||| ||||||    
T  36756159 tactattttggtcatctccgttagtttttaacatcaaatttctaaggtgaatcatatttaaaggtggttcaccataagcctta 36756241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 294 - 483
Target Start/End: Original strand, 117040 - 117229
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    |||| ||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||| ||| || ||| |||||||  ||| |||| |||| || |    
T  117040 tttgccttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtc 117139  T
Q  394 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |||||||||||| ||| |||| ||||||||| |||||||||| ||||||||||  ||| ||||||| ||||||| ||||  |||||||||    
T  117140 gtttattgttttggtcctctccgttagtttttaacatcaaatgtctaaggtgagtcatgtttaaaggtggtccaccatagaccttactaa 117229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 316 - 450
Target Start/End: Original strand, 8095360 - 8095494
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||| || | |||| || |||||| | |||| ||| | ||     
T  8095360 tcccttaacttattttattttctcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgtcgtttactattttggtcctttcc 8095459  T
Q  416 gttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||||||||| ||  | |||| ||||||||||||||    
T  8095460 gttagtttttaatcttaaatgtctaaggtgaacca 8095494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 288 - 373
Target Start/End: Original strand, 41521303 - 41521388
Alignment:
Q  288 taattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||| ||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  41521303 taatttttaggcttaatacatctcctgatcccttaacttattttattttttcagtttgatcccttaactataaagtgtgttaattt 41521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 22619909 - 22619981
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||| ||||    
T  22619909 tcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatctt 22619981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 458
Target Start/End: Original strand, 7486110 - 7486233
Alignment:
Q  335 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 434  Q
    |||||| ||||||||||||||||| |||||  ||||||| |||| |||| |||| ||| ||||| | |||| ||| |||| ||||||||| |||||||||    
T  7486110 ttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagtttttaacatcaaa 7486209  T
Q  435 tatctaaggtgaaccatatttaaa 458  Q
    | ||||| ||||||||| ||||||    
T  7486210 tgtctaaagtgaaccatgtttaaa 7486233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 402 - 483
Target Start/End: Complemental strand, 39325850 - 39325769
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||| || ||||||| ||||| | |||||||||||||||    
T  39325850 ttttagtcatctctgctagtttttaacatcaaatgtctaaggtgaactatgtttaaaggtggtctatcatatgccttactaa 39325769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 19913506 - 19913662
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| |||| |||  ||||||| |||||| ||||||| |||| ||||||||| ||| ||||||  |||| ||| ||||     
T  19913506 tcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcctctcc 19913605  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||||| ||| | |||| ||||||||||||||  |||| |||||||||| ||||    
T  19913606 gttagtttttaaccttaaatttctaaggtgaaccaactttatagatggtccaccata 19913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 479
Target Start/End: Complemental strand, 44103423 - 44103235
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    |||||||||| |||||||| || | |||||||||||| ||  |||||| ||  ||||||| ||||||  ||  || |||| || |||   || ||||| |    
T  44103423 ttttttggctcaatacatcgtttagtcccttaacttaattcttttttttagaatgatcccctaactaaaaaacgtctcaaattggtctcttatgtcttct 44103324  T
Q  391 gccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
     ||||||  | |||| ||| |||| ||||||||| |||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||    
T  44103323 tccgtttcctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatgtttaaaggtggtccaccatatgcctta 44103235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 379
Target Start/End: Original strand, 16346094 - 16346176
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||||||||| ||| ||||||||||||||||| ||| |||||||| |||||||||||||||  || ||||||| |||||    
T  16346094 ggcttaatacatctctcagtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 16346176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 31623901 - 31624023
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| ||||||| ||||    
T  31623901 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtt 31624000  T
Q  397 tattgttttagtcatctctgtta 419  Q
    |||| |||||||| |||| ||||    
T  31624001 tattattttagtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 450
Target Start/End: Original strand, 35943902 - 35944056
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaag-tgtgtcaatttagtcctataagtcttatgccgt 395  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||||||| ||| ||  ||| ||||||| |||| |||| |||||||| ||    
T  35943902 ggcttaatacatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagt 35944001  T
Q  396 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||| | |||| |||||||| ||||||||| ||| | |||| ||||||||||||||    
T  35944002 ttactattttggtcatctccgttagtttttaactttaaatgtctaaggtgaacca 35944056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 21670164 - 21670241
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||| |||| ||||||||| ||||||||||||||||||||||||||||| |||  ||||||| |||||||||||    
T  21670164 ttttggtcttctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggtccaccatatgcctta 21670241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 21961923 - 21962004
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |||| ||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||| ||||||| |||||||||||||||    
T  21961923 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaa 21962004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 319 - 447
Target Start/End: Original strand, 39220696 - 39220824
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt-agtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    |||||||||||||| ||| ||| |||| ||  ||||||||||||||| ||||||| | |||| |||||||| ||||||||| | |||| || ||||||||    
T  39220696 cttaacttattttaatttctcattttggtctattaactattaagtgtttcaatttgattcct-taagtcttctgccgtttactattttcgttatctctgt 39220794  T
Q  418 tagttttgaacatcaaatatctaaggtgaa 447  Q
    ||||||| ||| | |||| |||||||||||    
T  39220795 tagtttttaaccttaaatgtctaaggtgaa 39220824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 316 - 421
Target Start/End: Original strand, 41866908 - 41867013
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| | ||| ||| |||| | |||| |||||||||    
T  41866908 tcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttggtcatctct 41867007  T
Q  416 gttagt 421  Q
    ||||||    
T  41867008 gttagt 41867013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 281 - 357
Target Start/End: Original strand, 2419853 - 2419929
Alignment:
Q  281 acaataataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    |||||| |||||||||||||||||||||||  |  |||||||| |||||||| ||| ||||||||||||||||||||    
T  2419853 acaatattaattttttggcttaatacatctcccggtcccttaatttattttaatttctcagtttgatcccttaacta 2419929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 34616143 - 34616215
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| ||||||||||| ||||||||| |||||| ||||||| |||| |||| ||||    
T  34616143 tcccttaacttattttattttctcagtttgatctcttaactataaagtgtctcaatttggtcccataaatctt 34616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 34617297 - 34617189
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||||| |||  |||| | ||||||||  |||| ||||| ||     
T  34617297 tcccttaacttttttttttttcccagtttgatccattaactattaagtgtgtcaatttagtcccatagctcttcttccgtttatcattttggtcatttcc 34617198  T
Q  416 gttagtttt 424  Q
    || ||||||    
T  34617197 gtcagtttt 34617189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 380 - 464
Target Start/End: Original strand, 36938759 - 36938843
Alignment:
Q  380 ataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    |||| |||| ||||||||| | |||| ||| ||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||    
T  36938759 ataaatcttctgccgtttactattttggtcttctctgttaatttttaacatcaaatatctaaagtgaaccatatttaaaggtggt 36938843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 398
Target Start/End: Complemental strand, 38591131 - 38591027
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    |||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||||||||    
T  38591131 tttggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgcc 38591032  T
Q  394 gttta 398  Q
    |||||    
T  38591031 gttta 38591027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 405
Target Start/End: Original strand, 43275745 - 43275853
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   || ||||||||||||| | |||||| |||| | || ||||||| |||||| |||||||||||| |||| ||||||||||||    
T  43275745 ggcttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtt 43275844  T
Q  397 tattgtttt 405  Q
    |||| ||||    
T  43275845 tattatttt 43275853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 289 - 379
Target Start/End: Original strand, 4534021 - 4534111
Alignment:
Q  289 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||| |||||||||||||  ||| ||||||||||||||||| ||| |||||||| ||| |||| |||||| ||| ||||||| |||||    
T  4534021 aatttttaggcttaatacatccctcagtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtcct 4534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 24069548 - 24069466
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||   |||||| ||||||||||||||||| |||||| ||||||| |||| |||| |||| |||||||||    
T  24069548 tcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgttta 24069466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 41868039 - 41867913
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||||||| ||   |||||||| |||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| | ||||||||    
T  41868039 ttggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccg 41867940  T
Q  395 tttattgttttagtcatctctgttagt 421  Q
    ||| || |||||||| |||| ||||||    
T  41867939 ttttttattttagtcctctccgttagt 41867913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 29738286 - 29738387
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||||||||||| | |||||| |||| ||  |||||||| |||||| |||||||||||  ||||||||| |||||||    
T  29738286 ggcttaatacatcgtttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtt 29738385  T
Q  397 ta 398  Q
    ||    
T  29738386 ta 29738387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 450
Target Start/End: Original strand, 20308622 - 20308753
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 418  Q
    |||||||||||||||||| |||||||  |  |||||||||||||||| ||||||| |||  |||| |||| || |||||| | |||| ||||| ||  ||    
T  20308622 cttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccatt 20308721  T
Q  419 agttttgaacatcaaatatctaaggtgaacca 450  Q
    | |||| ||| | |||| ||||||||||||||    
T  20308722 aatttttaaccttaaatgtctaaggtgaacca 20308753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 450
Target Start/End: Original strand, 21095255 - 21095386
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 418  Q
    |||||||||||||||||| |||||||  |  |||||||||||||||| ||||||| |||  |||| |||| || |||||| | |||| ||||| ||  ||    
T  21095255 cttaacttattttattttctcagtttagtatcttaactattaagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccatt 21095354  T
Q  419 agttttgaacatcaaatatctaaggtgaacca 450  Q
    | |||| ||| | |||| ||||||||||||||    
T  21095355 aatttttaaccttaaatgtctaaggtgaacca 21095386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 356
Target Start/End: Original strand, 35462654 - 35462721
Alignment:
Q  289 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaact 356  Q
    ||||||| |||||||||||||| |   ||| ||||||||||||||||| |||||||||||||||||||    
T  35462654 aatttttaggcttaatacatctgttggtcctttaacttattttattttctcagtttgatcccttaact 35462721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 424
Target Start/End: Complemental strand, 36940153 - 36940027
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| ||   |||| |||| ||||||||    
T  36940153 gcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgttt 36940054  T
Q  398 attgttttagtcatctctgttagtttt 424  Q
    | | |||| |||||||| |||| ||||    
T  36940053 actattttggtcatctccgttaatttt 36940027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 45194497 - 45194579
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||| |||||||| ||||| |||||| ||| ||||||||||||||| | ||||||||  ||||| |||| |||||||||    
T  45194497 tcccttaatttattttaattttttagtttggtcctttaactattaagtgttttaatttagtgttataaatcttttgccgttta 45194579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 45195906 - 45195844
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcc 378  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||| |||||| ||||||||||||    
T  45195906 tcccttaacttattttaatttctcagtttggtcccttaaatataaagtgtctcaatttagtcc 45195844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 472
Target Start/End: Original strand, 10052097 - 10052274
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||| ||| ||   |||||||||||||| |   |||||| |||| |||| ||| ||| |||||| |||| || ||||  || ||| | |||||    
T  10052097 ttggcttaatatatcatttggtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccg 10052196  T
Q  395 tttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||   | |||| ||||||||  |||||||| ||||| |||| |||||| |||||||||||||||| ||||||| ||||    
T  10052197 ttacctcttttggtcatctcctttagtttttaacattaaatgtctaagatgaaccatatttaaaggtggtccaccata 10052274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 22914292 - 22914247
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  22914292 tcccttaacttattttaatttttcagtttgatccattaactattaa 22914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 294 - 379
Target Start/End: Complemental strand, 35463113 - 35463028
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||  |   ||| ||||||||||||||||| ||||||||||||||||||||| || ||| |||| || |||||    
T  35463113 tttggcttaatacatccgttggtcctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtcct 35463028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 287 - 472
Target Start/End: Original strand, 36070163 - 36070348
Alignment:
Q  287 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 386  Q
    ||||||| | ||||||||||||| ||   |||||||| |||||||   |||||| |||| |||| ||||||| |||||| |||||||  ||| |||| ||    
T  36070163 ataatttataggcttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatc 36070262  T
Q  387 ttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || ||||||||| | |||| ||| || | |||||| ||  || | |||| ||||||||||||||  |||| || ||||||| ||||    
T  36070263 ttctgccgtttactattttggtcctccccgttagtctttgaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 36070348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 422
Target Start/End: Complemental strand, 36071499 - 36071374
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | || |||||||||| || | |||||| |||| ||||||||||||  ||| | |||| || |||| |||| |||| | |||||    
T  36071499 ggcttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgtt 36071400  T
Q  397 tattgttttagtcatctctgttagtt 422  Q
    |||  |||| ||||||||||||||||    
T  36071399 tatcattttggtcatctctgttagtt 36071374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 373
Target Start/End: Original strand, 22913187 - 22913263
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||| |||  | ||||||||||||||| ||| |||||| ||||||||||||| ||| ||| |||||||    
T  22913187 ggcttaatacatccttcgattccttaacttattttaatttctcagttggatcccttaactagtaaatgtttcaattt 22913263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 396
Target Start/End: Complemental strand, 10053865 - 10053766
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||| || ||||  || |||||||| ||||    
T  10053865 ggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgtt 10053766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 8096647 - 8096601
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaag 362  Q
    |||||||||||||||||||||||||||||  || |||||||||||||    
T  8096647 tcccttaacttattttattttttcagtttagtctcttaactattaag 8096601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 578
Target Start/End: Original strand, 10052330 - 10052380
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||| |||||||||| ||||||||| ||||||||||||||||| |||||||    
T  10052330 gttggatcatgtagggtctattgtattttactgtgaaccactaccacctaa 10052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 13513643 - 13513693
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacc 575  Q
    |||||||||||||||  | |||||||||||||||||||||||||| |||||    
T  13513643 accgttgaatcatgtgaggtctattgtactttactgtgaaccactcacacc 13513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 575
Target Start/End: Original strand, 13603176 - 13603226
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacc 575  Q
    |||||||||||||||  | |||||||||||||||||||||||||| |||||    
T  13603176 accgttgaatcatgtgaggtctattgtactttactgtgaaccactcacacc 13603226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 361
Target Start/End: Complemental strand, 23768604 - 23768542
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||| | |  ||||||||||||||||| |||||||||||| |||||| ||||||||    
T  23768604 cttaatacatcctccggtcccttaacttattttagtttttcagtttggtcccttcactattaa 23768542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 578
Target Start/End: Complemental strand, 37276100 - 37276066
Alignment:
Q  544 tctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||||||||||||||||||||||||||||    
T  37276100 tctattgtactttactgtgaaccactaacacctaa 37276066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 9190542 - 9190481
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||| ||| |||||||  ||||||||||||||| ||| ||||||| |||||    
T  9190542 ccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtcct 9190481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 12818768 - 12818813
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  12818768 tcccttaacttattttaatttctcagtttggtcccttaactattaa 12818813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 37474159 - 37474075
Alignment:
Q  295 ttggcttaatacatc-tttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||| ||||| |||||||||||||||    |||||| |||| |||||||||||| |||||| ||||||| |||||    
T  37474159 ttggcttaatacatcatttca-tcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcct 37474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 291 - 379
Target Start/End: Original strand, 9189383 - 9189471
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||| |||||||||||| | |  |||||||| |||||||| ||| ||||| || |||||||||||||||  || ||||||| |||||    
T  9189383 tttttttgcttaatacatcctccggtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtcct 9189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 400
Target Start/End: Original strand, 14820207 - 14820291
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttatt 400  Q
    ||||||||||||||||    ||| | |||| |||| ||||||| |||||| |||||||||||| |||| ||||||| ||||||||    
T  14820207 tcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgtttatt 14820291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 24068344 - 24068416
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||||||||    
T  24068344 tcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtctt 24068416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 578
Target Start/End: Original strand, 36756289 - 36756341
Alignment:
Q  527 cgttgaatcatgtaggatcta-ttgtactttactgtgaaccactaacacctaa 578  Q
    ||||| |||||||||| |||| ||||| |||||||||||||||||||||||||    
T  36756289 cgttggatcatgtagggtctaattgtattttactgtgaaccactaacacctaa 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 599
Target Start/End: Original strand, 21962065 - 21962120
Alignment:
Q  544 tctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttc 599  Q
    |||||||||||||||||||||||||||||| || |   ||||||||||| ||||||    
T  21962065 tctattgtactttactgtgaaccactaacatctgataaaatccattcatcttcttc 21962120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 411
Target Start/End: Complemental strand, 43278023 - 43277928
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcat 411  Q
    |||||||||||||||| | |||| | |||| |||| ||||||| || ||| ||||||| ||||  ||| |||||||||||||| | |||| |||||    
T  43278023 tcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttactattttggtcat 43277928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 571
Target Start/End: Original strand, 45541697 - 45541748
Alignment:
Q  520 aaataaccgttgaatcatgtaggatctattgtactttactgtgaaccactaa 571  Q
    |||| ||| |||||| ||||||| |||||||||||||||||| |||||||||    
T  45541697 aaatgaccattgaattatgtagggtctattgtactttactgtaaaccactaa 45541748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 396
Target Start/End: Complemental strand, 7770997 - 7770919
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    |||||||||||||| | |||||| |||||||   ||||||| |||||| ||||||| |||  |||| ||||||||||||    
T  7770997 ccttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccgtt 7770919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 578
Target Start/End: Complemental strand, 13363468 - 13363418
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||| |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  13363468 gttggatcatgtagggtctattgtatttttgtgtgaaccactaacacctaa 13363418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 13363594 - 13363532
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    |||| ||| |||| ||||||||| |||| ||||| ||||| ||||||||||||||||| ||||    
T  13363594 ttttggtcctctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggt 13363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 473
Target Start/End: Original strand, 21267241 - 21267303
Alignment:
Q  411 tctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatat 473  Q
    |||| ||||||||| |||||||||||||||||||| |||||  || ||| ||||||| |||||    
T  21267241 tctccgttagtttttaacatcaaatatctaaggtggaccatgattcaaggtggtccaccatat 21267303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 424
Target Start/End: Original strand, 38789066 - 38789172
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    |||||||||||||| |||||||| |||  || | |||| |||||  || |||||||  |||||||| |||||||| ||||||| ||||  |||||||  |    
T  38789066 ccttaacttattttcttttttcattttagtctcgtaacaattaaacgtctcaatttgatcctataaatcttatgcagtttattattttgatcatctccat 38789165  T
Q  418 tagtttt 424  Q
    |||||||    
T  38789166 tagtttt 38789172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 528 - 578
Target Start/End: Complemental strand, 39546567 - 39546517
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||| ||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  39546567 gttggatcatgtgggatctattgtattttaccgtgaaccacaaacacctaa 39546517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 13513520 - 13513597
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||| |||| ||||| ||| |||||||||| | |||| |||||||||||||||  ||||||| ||||| |||||    
T  13513520 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatatacctta 13513597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 13603053 - 13603130
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| ||| |||| ||||| ||| |||||||||| | |||| |||||||||||||||  ||||||| ||||| |||||    
T  13603053 ttttggtcctctccgttagcttttaacatcaaatgtataagatgaaccatatttaaaagtggtccaccatatacctta 13603130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 419
Target Start/End: Complemental strand, 31625484 - 31625383
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    ||||||||||||||   |||||| |||| |||| ||| ||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||| |||| ||    
T  31625484 ccttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgt 31625385  T
Q  418 ta 419  Q
    ||    
T  31625384 ta 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 38589816 - 38589916
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||||||||||| | |||||| |||| |||  ||||||| |||||  ||||||| |||| |||| ||||||| ||||    
T  38589816 ggcttaatacatcatttggtcccttaacttatttt-tgttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtt 38589914  T
Q  397 ta 398  Q
    ||    
T  38589915 ta 38589916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 472
Target Start/End: Original strand, 44606172 - 44606309
Alignment:
Q  335 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 434  Q
    |||||| |||| |||| |||||||  ||||| ||||||| |||| |||| |||| | | ||||||| ||||  || ||||  |||||||| ||| | |||    
T  44606172 ttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgtttattattttgatcctctccattagtttttaaccttaaa 44606271  T
Q  435 tatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    | ||||||||||||||  |||| || ||||||| ||||    
T  44606272 tgtctaaggtgaaccaactttataggtggtccaccata 44606309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 294 - 450
Target Start/End: Complemental strand, 12831062 - 12830906
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||     
T  12831062 tttggcttaatacatctctcggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgct 12830963  T
Q  394 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||||| | |||| ||| |||| |||| |||| |||   |||||||| ||||||||||    
T  12830962 gtttactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaacca 12830906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 294 - 450
Target Start/End: Complemental strand, 12863042 - 12862886
Alignment:
Q  294 tttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgcc 393  Q
    ||||||||||||||||| ||  || |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||| |||     
T  12863042 tttggcttaatacatctctcggtctcttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgct 12862943  T
Q  394 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||||| | |||| ||| |||| |||| |||| |||   |||||||| ||||||||||    
T  12862942 gtttactattttggtcctctccgttaatttttaaccctaaatatcttaggtgaacca 12862886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 8188302 - 8188230
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  8188302 tcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtctt 8188230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 7426655 - 7426811
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||| |||||||||||| | ||||| ||||||||| |||||||||||||||| | || | ||||||||  |||| |||| ||||||| || | ||     
T  7426655 tcccttaatttattttattttcttagtttaatcccttaattattaagtgtgtcaatatggttccataagtctactgccatttactgttttattcctttcc 7426754  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||| |||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  7426755 gtcaatttttaacatcaaatgtctaaggtgaatcatatttaaaggtggtccaccata 7426811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 295 - 421
Target Start/End: Complemental strand, 32735602 - 32735476
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccg 394  Q
    ||||||||||||||| | |  ||||||||| ||||||||||| ||| ||||||||||||| |||||| ||| | ||||| |||| |||| |||| |||||    
T  32735602 ttggcttaatacatcctccgatcccttaacatattttattttctcaatttgatcccttaattattaaatgttttaatttggtcccataactcttctgccg 32735503  T
Q  395 tttattgttttagtcatctctgttagt 421  Q
    |||||| |||| |||||||||||||||    
T  32735502 tttattattttggtcatctctgttagt 32735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 316 - 445
Target Start/End: Original strand, 42510128 - 42510257
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||  ||||     
T  42510128 tcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctcc 42510227  T
Q  416 gttagttttgaacatcaaatatctaaggtg 445  Q
    ||||||||| ||| |||||| |||| ||||    
T  42510228 gttagtttttaacctcaaatgtctatggtg 42510257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 317 - 398
Target Start/End: Complemental strand, 22819650 - 22819569
Alignment:
Q  317 cccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||| |||| |||| |||||||||    
T  22819650 cccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgttta 22819569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 15857720 - 15857612
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||| |||||||  ||| |||| ||||||| ||||||   |||| ||||||||     
T  15857720 tcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctcc 15857621  T
Q  416 gttagtttt 424  Q
    |||||||||    
T  15857620 gttagtttt 15857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 320 - 448
Target Start/End: Original strand, 32734150 - 32734277
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| | ||||| |||| |||| |||| || |||||| | |||| ||||| || ||||    
T  32734150 ttaacttattttattttttcagtttggtcccttaactatt-agtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgtta 32734248  T
Q  420 gttttgaacatcaaatatctaaggtgaac 448  Q
    ||||| ||  | |||||||||||||||||    
T  32734249 gtttttaatcttaaatatctaaggtgaac 32734277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 472
Target Start/End: Complemental strand, 2167576 - 2167461
Alignment:
Q  356 tattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatattt 455  Q
    |||||||||| ||||||| |||| |||| |||| ||||||||||| |||| ||| |||||||||||||| ||| | |||| ||||||||||||||  |||    
T  2167576 tattaagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc-tctctgttagtttttaaccttaaatgtctaaggtgaaccaacttt 2167478  T
Q  456 aaagatggtccagcata 472  Q
    | |||||||||| ||||    
T  2167477 atagatggtccaccata 2167461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 284 - 379
Target Start/End: Complemental strand, 11907295 - 11907200
Alignment:
Q  284 ataataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||| ||||||||||||||||||||   |  ||||||||||||||||| ||| |||||||| ||||||||||||||| ||| ||||||| |||||    
T  11907295 ataattattttttggcttaatacatcccccggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcct 11907200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 450
Target Start/End: Original strand, 40058035 - 40058166
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 418  Q
    |||||||||||||   |||||| |||||||||||||||||||||||| |||| || |||  |||| |||| |||||||||   |||| |||||||| |||    
T  40058035 cttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtt 40058134  T
Q  419 agttttgaacatcaaatatctaaggtgaacca 450  Q
    |||||| ||  | |||| ||||||||||||||    
T  40058135 agtttttaatcttaaatgtctaaggtgaacca 40058166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 297 - 398
Target Start/End: Complemental strand, 12936223 - 12936122
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||||||||||| |||    
T  12936223 ggcttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtt 12936124  T
Q  397 ta 398  Q
    ||    
T  12936123 ta 12936122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 316 - 464
Target Start/End: Original strand, 21387651 - 21387799
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| |||| |||| ||||||| || ||| ||||||| |||| |||| |||| |||||||   | |||| ||| | |||    
T  21387651 tcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctgtct 21387750  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||||||||| |||||||||  ||||||||||| ||||||||||| ||||    
T  21387751 gttagtttttaacatcaaaactctaaggtgaaacatatttaaaggtggt 21387799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 1663182 - 1663304
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | ||||||||||||||||    ||||| |||||||| |||||||| |||||| | ||||| ||||||||| |||| |||||||    
T  1663182 ggcttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtt 1663281  T
Q  397 tattgttttagtcatctctgtta 419  Q
    || | |||| ||| |||| ||||    
T  1663282 tactattttggtcttctccgtta 1663304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 373
Target Start/End: Complemental strand, 42511768 - 42511711
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  42511768 tcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaattt 42511711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 464
Target Start/End: Original strand, 18693712 - 18693860
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||| | |||| |||||||||||| || ||| ||||| | |||| |||| |||| || ||||   | |||| ||| |||||    
T  18693712 tcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcctctct 18693811  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||||||||| |||||||||  ||||||||||||||||| ||||| ||||    
T  18693812 gttagtttttaacatcaaaactctaaggtgaaccatatataaaggtggt 18693860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 30253600 - 30253672
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||| |||||| ||||||||||||||| || ||||| ||||||||||||||||||||| |||  |||||||||    
T  30253600 tcccctaacttgttttattttttcagtgtggtccctcaactattaagtgtgtcaatttggtctcataagtctt 30253672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 391
Target Start/End: Complemental strand, 12950381 - 12950287
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    ||||||||||||| || | |||||||||||||||    |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||||||||||    
T  12950381 ggcttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatg 12950287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 458
Target Start/End: Complemental strand, 7345511 - 7345350
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    |||||||||||| |||   ||||||||||||||||    ||||| |||| |||  ||||||| |||||| ||||||| |||| |||| | || || ||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgtt 7345412  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaa 458  Q
       | |||| ||| ||| || ||||||| |||||||||  ||||||||||||||||||||||    
T  7345411 atctcttttggtcctctatgatagtttttaacatcaaaactctaaggtgaaccatatttaaa 7345350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 8187180 - 8187240
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtc 377  Q
    |||||||| |||||||||||| ||||||| |||| ||||||||||| |||||||||||||||    
T  8187180 tcccttaatttattttattttctcagtttaatcc-ttaactattaaatgtgtcaatttagtc 8187240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 12829584 - 12829625
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  12829584 tcccttaacttattttattttttcagtttggtcccttaacta 12829625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 18677971 - 18678072
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| ||||||||| ||||||| |||||| ||||||| |||| |||| |||| || ||||    
T  18677971 ggcttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtt 18678070  T
Q  397 ta 398  Q
    ||    
T  18678071 ta 18678072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 450
Target Start/End: Complemental strand, 19525409 - 19525256
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| || |||| |||  ||||||||| |||||||    
T  19525409 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtt 19525310  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||   |||| ||| |||| ||| ||||| ||| | |||| |||| |||||||||    
T  19525309 taccattttggtcctctccgtttgtttttaaccttaaatttctatggtgaacca 19525256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 525 - 578
Target Start/End: Original strand, 21387860 - 21387913
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| ||||||| |||||||||||||||||| ||| ||||||||||||    
T  21387860 accgttgaattatgtagggtctattgtactttactgtaaacgactaacacctaa 21387913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 388
Target Start/End: Complemental strand, 224692 - 224620
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||||||||||||||||| |||||| |||| |||| ||||||| |||||| ||||||| |||  |||||||||    
T  224692 tcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtctt 224620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 7428045 - 7427993
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcc 349  Q
    ||||||||||||||  |  ||||||||||||||||||||||||||||||||||    
T  7428045 ggcttaatacatctcccgatcccttaacttattttattttttcagtttgatcc 7427993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 24761849 - 24761766
Alignment:
Q  289 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||| |||||||||||  | | ||||||||||||||||||||| | |||||  |||||||| |||||||||| |||||||    
T  24761849 aattttttgacttaatacatccct-agtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaattt 24761766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 40059430 - 40059322
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| ||||||||| |||||||||||||| | || || |||| |||| |||| ||||||||||  |||| || |||||     
T  40059430 tcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttatcattttggtgatctcc 40059331  T
Q  416 gttagtttt 424  Q
    |||| ||||    
T  40059330 gttaatttt 40059322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 299 - 398
Target Start/End: Original strand, 12933748 - 12933847
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||| ||| || | ||||||||||||||||   |||||| ||||||||| ||||||| |||||| |||||||  ||  ||||||||| |||||||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgttta 12933847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 299 - 398
Target Start/End: Original strand, 12947909 - 12948008
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||| ||| || | ||||||||||||||||   |||||| ||||||||| ||||||| |||||| |||||||  ||  |||||||||||| ||||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgttta 12948008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 23679142 - 23679221
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagt 376  Q
    ||||||||||||| | |  ||||| || |||||||| |||||||||||| |||||||||||||||  || ||||||||||    
T  23679142 ggcttaatacatcctccggtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaatttagt 23679221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 23855670 - 23855591
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagt 376  Q
    ||||||||||||| | |  ||||| || |||||||| |||||||||||| |||||||||||||||  || ||||||||||    
T  23855670 ggcttaatacatcctccggtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaatttagt 23855591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 39135771 - 39135693
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||| ||| | |  ||| ||||||||||||| ||| |||||||| ||||||||||||||| ||| |||||||    
T  39135771 ttggcttaatagatcctccggtcctttaacttattttaatttctcagtttgctcccttaactattaaatgtttcaattt 39135693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 12861563 - 12861604
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  12861563 tcccttaacttattttattttctcagtttggtcccttaacta 12861604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 373
Target Start/End: Original strand, 19523973 - 19524054
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||| ||| ||   ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||    
T  19523973 tttttggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaattt 19524054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 423
Target Start/End: Complemental strand, 15510365 - 15510258
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| ||||||||| ||||||| |||||| ||||||| ||||  || ||||| |||||||   | |||| ||| |||||    
T  15510365 tcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctct 15510266  T
Q  416 gttagttt 423  Q
    ||||||||    
T  15510265 gttagttt 15510258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 24070419 - 24070482
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||| |||||||| ||| ||||| ||||||||||||||||||  || ||||||| |||||    
T  24070419 tcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtcct 24070482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 24071545 - 24071482
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| |||||||||||  | |||||| |||||| ||| ||||||| |||||    
T  24071545 tcccttaacttattttaatttttcagtttagttccttaattattaaatgtttcaatttggtcct 24071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 19827262 - 19827160
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 395  Q
    |||||||||||||| || | || |||||||||||||   |||||| |||| |||| ||| ||| |||||| ||||||| |||| |||| |||| | ||||    
T  19827262 tggcttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgt 19827163  T
Q  396 tta 398  Q
    |||    
T  19827162 tta 19827160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 26403302 - 26403424
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| |  | ||| ||||||||||||   |||||| |||| |||||||||||| |||||| |||||||  ||  |||| | ||||| ||||    
T  26403302 ggcttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtt 26403401  T
Q  397 tattgttttagtcatctctgtta 419  Q
    || | |||| ||| |||||||||    
T  26403402 tactattttggtcttctctgtta 26403424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 29906130 - 29906172
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactat 358  Q
    |||||||||||||||| || ||||| |||||||||||||||||    
T  29906130 tcccttaacttatttttttgtttcattttgatcccttaactat 29906172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 361
Target Start/End: Complemental strand, 30916245 - 30916175
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||| ||||||||||||| ||   |||||||||||||||||| |||||| |||  |||| ||||||||||    
T  30916245 tttttaggcttaatacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactattaa 30916175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 112 - 158
Target Start/End: Original strand, 38617662 - 38617708
Alignment:
Q  112 aatgatgatttttaatatattgcaaactcagagaaatcaagaaccaa 158  Q
    ||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  38617662 aatgatgatttttaagataatgcaaactcagaggaattaagaaccaa 38617708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 21006154 - 21006223
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagt 385  Q
    |||||||||||||||| | || ||| |||  |||||||||| |||| ||||||||||| ||||| |||||    
T  21006154 tcccttaacttattttttcttctcactttagtcccttaacttttaaatgtgtcaatttggtcctgtaagt 21006223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 22818174 - 22818215
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaacta 357  Q
    |||||||||||||||| ||| |||||||||||| ||||||||    
T  22818174 tcccttaacttattttgtttgttcagtttgatctcttaacta 22818215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 39134681 - 39134726
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    |||||||||||||||||  || |||||||| |||||||||||||||    
T  39134681 tcccttaacttattttaaattctcagtttggtcccttaactattaa 39134726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 297 - 464
Target Start/End: Complemental strand, 749 - 582
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||||||||||| | || ||| |||| |||| ||||||| |||||| |||||||||||| |||| |||| |||||||    
T  749 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 650  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||   |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  649 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggt 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 578
Target Start/End: Complemental strand, 522 - 468
Alignment:
Q  524 aaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    ||||||||||| |||| || |||||| |||||||||||||| || ||||||||||    
T  522 aaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaa 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 297 - 464
Target Start/End: Original strand, 525 - 692
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||||||||||| | || ||| |||| |||| ||||||| |||||| |||||||||||| |||| |||| |||||||    
T  525 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 624  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||   |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  625 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 752 - 806
Alignment:
Q  524 aaccgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    ||||||||||| |||| || |||||| |||||||||||||| || ||||||||||    
T  752 aaccgttgaattatgtcgggtctattatactttactgtgaatcattaacacctaa 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 297 - 464
Target Start/End: Complemental strand, 9599 - 9432
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   |||||||||||||||| | || ||| |||| |||| ||||||| |||||| |||||||||||| |||| |||| |||||||    
T  9599 ggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtt 9500  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    ||   |||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  9499 taccattttggtcatctccgttagtttttaacataaaaaatctaaggtgaaccatatttaaagatggt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 6e-30; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 296 - 483
Target Start/End: Complemental strand, 17350224 - 17350037
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 395  Q
    |||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| ||||  || ||||| | | ||    
T  17350224 tggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgt 17350125  T
Q  396 ttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |   | |||| ||| |||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  17350124 tacctcttttggtcctctccgttagtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaa 17350037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 299 - 479
Target Start/End: Complemental strand, 12062503 - 12062323
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| || | |||| ||| |||||    
T  12062503 cttaatacatcctccggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgttta 12062404  T
Q  399 ttgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
     | |||| ||||| ||  |||||||| ||| | |||| ||||||||||||||  |||| || || |||| ||||| |||||    
T  12062403 ctattttggtcatttccattagtttttaaccttaaatgtctaaggtgaaccaactttataggtgatccaccatatacctta 12062323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 319 - 483
Target Start/End: Original strand, 39133034 - 39133198
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtt 418  Q
    |||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| ||||  || ||||| |  ||||   | |||| ||| ||||||||    
T  39133034 cttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgtt 39133133  T
Q  419 agttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  39133134 agtttttaacatcaaatgtctaaggtgaaccatatttaaaggtggtccaccatatgccttactaa 39133198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 21127939 - 21128021
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||| |||| |||||||||    
T  21127939 tcccttaacttattttattttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgttta 21128021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 292 - 472
Target Start/End: Original strand, 53808308 - 53808488
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    ||||| |||||||||||| ||   ||||||||||||||||   |||| | |||| || | ||||||| |||||| ||||| | |||| |||| |||||||    
T  53808308 ttttttgcttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatg 53808407  T
Q  392 ccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
     |||||| | |||| ||||||||  |||||||| |||||||||| ||||||||||| ||||| ||||| ||||||| ||||    
T  53808408 tcgtttactattttggtcatctccattagtttttaacatcaaatttctaaggtgaatcatatctaaaggtggtccaccata 53808488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 525 - 753
Target Start/End: Complemental strand, 17349995 - 17349752
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtc-------atctt 617  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||   ||| ||||||   ||||||||||||||| ||       |||||    
T  17349995 accgttgaatcatgtagggtctattgaactttattgtgaaccactaacacctaataaaatacattca---tcttcttcttccctcatctcttcatatctt 17349899  T
Q  618 gaacaacaacttcatcaat-------aaaatctagaaaatcccaaa----actaataattaaacctactatttaatcaccacacaaccatcattatcatc 706  Q
     ||||| ||||||||||||       |||||| | |||||||||||    | ||| ||||||| ||||| |||||||||||||||||| ||||| | |||    
T  17349898 caacaataacttcatcaataaaacccaaaatccaaaaaatcccaaaaaataataacaattaaatctactctttaatcaccacacaaccgtcattgtgatc 17349799  T
Q  707 gtcatctataatcattaacaccattcttcttaaatattattcttcat 753  Q
     |||||||| ||  | |||||| |||||  |||||||||||||||||    
T  17349798 ttcatctatcattttcaacacccttctttctaaatattattcttcat 17349752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 467
Target Start/End: Original strand, 8371203 - 8371385
Alignment:
Q  285 taataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataag 384  Q
    |||| |||||| ||||||||||||| ||   |||||||||||||||| | |||||| |||| |||| ||||||| || ||| ||||||| || | ||||     
T  8371203 taattatttttaggcttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaa 8371302  T
Q  385 tcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    |||| ||| ||||| | |||| ||| |||| ||||||||| |||||||||||||||| | ||||| || ||| || |||||||    
T  8371303 tcttctgcagtttactattttggtcctctccgttagtttttaacatcaaatatctaaagcgaaccgtacttagaggtggtcca 8371385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 297 - 479
Target Start/End: Original strand, 25583109 - 25583290
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | ||||||||||||||||   |||||| |||| |||| ||||||||||  || ||||||| |||| ||||||||| |||||||    
T  25583109 ggcttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtt 25583208  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    || | |||| ||| ||||||||| |||| ||| | |||| ||||||| |||| ||| |||||| || |||| |||| ||||||    
T  25583209 tactattttggtcctctctgttaatttttaaccttaaatgtctaaggcgaactata-ttaaaggtgctccaccataggcctta 25583290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 318 - 399
Target Start/End: Complemental strand, 43346547 - 43346466
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttat 399  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||  |||| |||| || |||||||    
T  43346547 ccttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtctcataactcttctgtcgtttat 43346466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 336 - 464
Target Start/End: Original strand, 11219464 - 11219592
Alignment:
Q  336 tttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaat 435  Q
    ||||| |||| |||| ||||||| |||||| ||||||| |||  || |||||| ||||||||| | |||| |||||||| ||||| ||| |||||||||     
T  11219464 tttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcatctccgttagattttaacatcaaaa 11219563  T
Q  436 atctaaggtgaaccatatttaaagatggt 464  Q
     ||||||||||||||||||||||| ||||    
T  11219564 ttctaaggtgaaccatatttaaaggtggt 11219592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 316 - 472
Target Start/End: Original strand, 23559833 - 23559989
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||| |||||||| |||||||||| |||||||  ||| |||| |||| || |||||| | |||| ||| ||||     
T  23559833 tcccttaacttattttattttctcagtttggtcccttaattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctcc 23559932  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||||||||| ||| | || | |||||| |||||||  |||| || ||||||| ||||    
T  23559933 gttagtttttaaccttaattgtctaagatgaaccaactttataggtggtccaccata 23559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 528 - 753
Target Start/End: Original strand, 39133243 - 39133483
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttcttccctcgtc-------atcttgaa 620  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||   ||| || ||||   |||||||||||||| ||       ||||| ||    
T  39133243 gttgaatcatgtaaggtctattgtactttattgtgaaccactaacacctaataaaatacagtcat---cttcttcttccctcatctcttcatatcttcaa 39133339  T
Q  621 caacaacttcatcaataaaatcta-------gaaaatcccaaaac----taataattaaacctactatttaatcaccacacaaccatcattatcatcgtc 709  Q
    ||| |||||||||||||||| | |       |||||||||||||     ||| ||||||| |||||||||||||||||||||||||||||  ||||| ||    
T  39133340 caataacttcatcaataaaacccaaaacccagaaaatcccaaaaaataataacaattaaatctactatttaatcaccacacaaccatcatcgtcatcttc 39133439  T
Q  710 atctataatcattaacaccattcttcttaaatattattcttcat 753  Q
    |||||| ||  | |||||| |||||  ||||||||| |||||||    
T  39133440 atctatcattttcaacacccttctttctaaatattactcttcat 39133483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 23561252 - 23561145
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||| |||||||||||||   |  ||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||| ||||||||| |||| |    
T  23561252 tttttaggcttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattaagtgtcttaatttggtcctataattcttct 23561153  T
Q  391 gccgttta 398  Q
    | ||||||    
T  23561152 gacgttta 23561145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 398
Target Start/End: Original strand, 48866158 - 48866237
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||||||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||| | |||||||    
T  48866158 cttaacttattttattttctcagtttagtccctgaactattaagtgtgtcaatttggtcctataagtcttcttccgttta 48866237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 394 - 472
Target Start/End: Original strand, 47765530 - 47765608
Alignment:
Q  394 gtttattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||  |||||||||||||| ||||    
T  47765530 gtttattgttttggtcatctccgttagtttttaacatcaaatatcttaggtgaaccattgttaaagatggtccaccata 47765608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 316 - 450
Target Start/End: Complemental strand, 48867532 - 48867398
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||| || ||||||    |||||| |  | | ||| | |||    
T  48867532 tcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcccattagtctttctacgtttactaatgtggtcctttct 48867433  T
Q  416 gttagttttgaacatcaaatatctaaggtgaacca 450  Q
    ||||||||| ||| | |||| ||||||||||||||    
T  48867432 gttagtttttaaccttaaatgtctaaggtgaacca 48867398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 291 - 419
Target Start/End: Complemental strand, 10987780 - 10987652
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||||||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| | ||||    
T  10987780 ttttttggcttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttat 10987681  T
Q  391 gccgtttattgttttagtcatctctgtta 419  Q
    ||||||| || |||| ||| |||||||||    
T  10987680 gccgttttttattttggtcctctctgtta 10987652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 318 - 450
Target Start/End: Complemental strand, 35174482 - 35174350
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgt 417  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||  | |||| |||| |||| |  |||||| | |||| ||||| |||||    
T  35174482 ccttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgt 35174383  T
Q  418 tagttttgaacatcaaatatctaaggtgaacca 450  Q
    || |||| ||| | |||  ||||||||||||||    
T  35174382 taatttttaaccttaaaagtctaaggtgaacca 35174350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 7483541 - 7483464
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||  ||| ||| |||||||||||    
T  7483541 ttttggtcatctccgttagtttttaacatcaaatatctaaggtgaaccatattaaaaagtggcccaccatatgcctta 7483464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 335 - 467
Target Start/End: Original strand, 19622038 - 19622170
Alignment:
Q  335 ttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgttagttttgaacatcaaa 434  Q
    |||||| |||| |||| ||||||| |||||| |||||||||||  |||| |||| |||  |||| || ||| ||| |||| ||||||||| |||||||||    
T  19622038 ttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttggtcctctccgttagttttcaacatcaaa 19622137  T
Q  435 tatctaaggtgaaccatatttaaagatggtcca 467  Q
    | | |||||||||| || ||||||| |||||||    
T  19622138 tgtttaaggtgaactatgtttaaaggtggtcca 19622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 320 - 424
Target Start/End: Complemental strand, 32980550 - 32980446
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctctgtta 419  Q
    |||||||||||| | |||||| |||| |||| ||||||  |||||| ||||||| ||||||||| |||| ||||||||| | |||| |||||||| ||||    
T  32980550 ttaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgtta 32980451  T
Q  420 gtttt 424  Q
    |||||    
T  32980450 gtttt 32980446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 421
Target Start/End: Original strand, 35173142 - 35173266
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    |||||||||||||   || ||||||||||||||||||||| ||| ||| |||||||||||||||||| | ||||||| |||  |||| |||| || ||||    
T  35173142 ggcttaatacatcccccagtcccttaacttattttattttctcaatttcatcccttaactattaagtatttcaatttggtctcataactcttttgtcgtt 35173241  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    || | |||| ||||| ||| |||||    
T  35173242 tactattttggtcatttctattagt 35173266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 421
Target Start/End: Complemental strand, 42634007 - 42633883
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| |||||||  ||||| ||||||| |||| |||| ||||||| ||||    
T  42634007 ggcttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtt 42633908  T
Q  397 tattgttttagtcatctctgttagt 421  Q
    |||| |||| ||| |||||||||||    
T  42633907 tattattttggtcctctctgttagt 42633883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 621 - 715
Target Start/End: Complemental strand, 24753368 - 24753269
Alignment:
Q  621 caacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctat 715  Q
    |||||||||||||||| |||||  |||||||||||||  |     ||||||||||||||| ||||||||||||||||| |||||| ||||| ||||||||    
T  24753368 caacaacttcatcaatcaaatccggaaaatcccaaaataataaatataattaaacctactctttaatcaccacacaactatcattgtcatcttcatctat 24753269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 578
Target Start/End: Original strand, 53808543 - 53808594
Alignment:
Q  527 cgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  53808543 cgttggatcatgtaggatctattgtattttactgtgaaccactaacacctaa 53808594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 296 - 370
Target Start/End: Complemental strand, 7921765 - 7921691
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaa 370  Q
    |||||||||||||| | |  |||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||    
T  7921765 tggcttaatacatcctccggtcccttaacttattttgttttctcagtttgatcacttaactattaagtgtctcaa 7921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 578
Target Start/End: Original strand, 11219653 - 11219706
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  11219653 accgttgaattatgtagggtctattgtactttcctgtgaaccactaacacctaa 11219706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 757
Target Start/End: Original strand, 31638480 - 31638553
Alignment:
Q  684 accacacaaccatcattatcatcgtcatctataatcattaacaccattcttcttaaatattattcttcatcttc 757  Q
    ||||| ||||||||||| || || |||||||| ||||| |||||| |||||| |||||||||||||||||||||    
T  31638480 accacgcaaccatcattgtcttcttcatctatcatcatcaacacccttcttcctaaatattattcttcatcttc 31638553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 420
Target Start/End: Complemental strand, 54654093 - 54653964
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||||||||||||||||| ||   ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| |    
T  54654093 ttttttggcttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttct 54653994  T
Q  391 gccgtttattgttttagtcatctctgttag 420  Q
    | |||||| | |||| ||| |||| |||||    
T  54653993 gtcgtttactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 21728185 - 21728247
Alignment:
Q  666 taaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||| ||||||    
T  21728185 taaacctactatttagtcactacaccaccatcattatcatcttcatctatcatcatcaacacc 21728247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 12060672 - 12060729
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||||||| |||||||  || |||||||||||||||| |||||||    
T  12060672 tcccttaacttattttattttctcagtttagtctcttaactattaagtgtctcaattt 12060729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 296 - 421
Target Start/End: Original strand, 42632700 - 42632825
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgt 395  Q
    |||||||||||||| ||   |||||||||||| |||   |||||| |||| |||| ||||||| |||||| |||||||  ||| |||| ||||||| |||    
T  42632700 tggcttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgt 42632799  T
Q  396 ttattgttttagtcatctctgttagt 421  Q
    ||| | |||||||| |||| ||||||    
T  42632800 ttactattttagtcctctccgttagt 42632825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 31638234 - 31638301
Alignment:
Q  418 tagttttgaacatcaaatat--ctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    ||||||| ||||||||||||  |||||||||||||||||||||| ||||| | |||| ||||||||||    
T  31638234 tagtttttaacatcaaatatatctaaggtgaaccatatttaaaggtggtctaccatacgccttactaa 31638301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 43345333 - 43345405
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| |||||| | |||||||||||| || ||| ||||||| |||| |||| ||||    
T  43345333 tcccttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatctt 43345405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 33000902 - 33000839
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||  || ||||||| |||||    
T  33000902 tcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtcct 33000839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 38639034 - 38639081
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgt 365  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||    
T  38639034 ccttaacttattttagtttttcagtttggtcccttaactataaagtgt 38639081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 39531918 - 39531855
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||| || ||| ||||||| |||||    
T  39531918 tcccttaacttattttaatttctcagtttaatcccttaactatgaaatgtttcaatttggtcct 39531855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 728
Target Start/End: Complemental strand, 47431021 - 47430958
Alignment:
Q  665 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||| ||||| |||| ||||||||| ||||| |||||||| ||||| ||||||    
T  47431021 ttaaacctactatttcatcactacaccaccatcattgtcatcttcatctatcatcatcaacacc 47430958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 424
Target Start/End: Complemental strand, 49334458 - 49334331
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| || | ||| || ||||||||| | |||||| |||| ||| |||||||| || ||| ||||| | |||| |||| |||| | |||||    
T  49334458 ggcttaatacatcatttaatcctttgacttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtt 49334359  T
Q  397 tattgttttagtcatctctgttagtttt 424  Q
    || | ||||  |||||||||||||||||    
T  49334358 tactattttgatcatctctgttagtttt 49334331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 50150735 - 50150798
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| |||||||| || |||||||||||| ||| ||||||| |||||    
T  50150735 tcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtcct 50150798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 34903010 - 34902948
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    |||| |||||||| ||||||||| |||| ||||| ||||| ||||||||||||||||| ||||    
T  34903010 ttttggtcatctccgttagtttttaacaccaaatgtctaaagtgaaccatatttaaaggtggt 34902948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 383
Target Start/End: Original strand, 51400210 - 51400296
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    |||||||||||| |||   ||||||||||||||||   |||||| |||||| || ||||||| |||||| |||||||||||| ||||    
T  51400210 ggcttaatacatgttttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataa 51400296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 51401453 - 51401371
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| |||||||||    
T  51401453 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 1031830 - 1031887
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| ||| |||||||    
T  1031830 tcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaattt 1031887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 379
Target Start/End: Original strand, 4067942 - 4068003
Alignment:
Q  318 ccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||| ||| | ||||| |||||    
T  4067942 ccttaacttattttaatttatcagtttaatcccttaactattaaatgttttaatttggtcct 4068003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 39530809 - 39530854
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||    
T  39530809 tcccttaacttattttaatttctcagtgtgatcccttaactattaa 39530854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 45730651 - 45730696
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  45730651 tcccttaacttattttaatttctcagtttggtcccttaactattaa 45730696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 421
Target Start/End: Complemental strand, 51825723 - 51825618
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||    ||||| |||| |||||||||||| |||||| ||||||| |||| |||| |||| || |||||| | |||| ||||| ||     
T  51825723 tcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttactattttggtcatatcc 51825624  T
Q  416 gttagt 421  Q
    ||||||    
T  51825623 gttagt 51825618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 54752611 - 54752712
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||||| ||  ||||||||||||    
T  54752611 ggcttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtt 54752710  T
Q  397 ta 398  Q
    ||    
T  54752711 ta 54752712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 32999812 - 32999856
Alignment:
Q  317 cccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||    
T  32999812 cccttaacttattttaatttctcagtttggtcccttaactattaa 32999856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 424
Target Start/End: Original strand, 48252947 - 48253055
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||||||||| | | |||| | |||| |||| ||||||| |||||| ||||||| |||| |||||||||   ||||||| |  | ||||||||||     
T  48252947 tcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatctcc 48253046  T
Q  416 gttagtttt 424  Q
    |||||||||    
T  48253047 gttagtttt 48253055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 361
Target Start/End: Original strand, 48336330 - 48336406
Alignment:
Q  285 taataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||| ||||||||||||||||||| ||  |||||||||||||||||   |||||| |||| |||  ||||||||||    
T  48336330 taatatttttttggcttaatacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactattaa 48336406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 727
Target Start/End: Original strand, 28776725 - 28776787
Alignment:
Q  665 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 727  Q
    ||||||| | ||||||||||| |||| ||||||||| ||||| |||||||| ||||| |||||    
T  28776725 ttaaaccaattatttaatcactacaccaccatcattgtcatcttcatctatcatcatcaacac 28776787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 41386125 - 41386247
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| || | |||| ||||| | ||||    
T  41386125 ggcttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtt 41386224  T
Q  397 tattgttttagtcatctctgtta 419  Q
    || | |||| ||| |||| ||||    
T  41386225 tactattttggtcctctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 291 - 373
Target Start/End: Complemental strand, 47808233 - 47808151
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    |||||||||||||||||||  | | ||||||||||||||||    ||||| |||| | |||||||||| |||||| |||||||    
T  47808233 ttttttggcttaatacatcacttagtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaattt 47808151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 666 - 728
Target Start/End: Original strand, 50879972 - 50880034
Alignment:
Q  666 taaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    |||||||||||||||||||| |||| |  |||||| ||||| |||||||| ||||| ||||||    
T  50879972 taaacctactatttaatcactacaccaatatcattgtcatcttcatctatcatcatgaacacc 50880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 7583973 - 7584018
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    |||||||||||||||| || ||||| |||| |||||||||||||||    
T  7583973 tcccttaacttatttttttgtttcattttggtcccttaactattaa 7584018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 728
Target Start/End: Complemental strand, 37610607 - 37610542
Alignment:
Q  663 aattaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacacc 728  Q
    ||||||||||||||||| ||||| |||  ||||||||  ||||| |||||||| ||||| ||||||    
T  37610607 aattaaacctactatttgatcactacaataccatcatagtcatcttcatctatcatcatcaacacc 37610542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 287 - 396
Target Start/End: Complemental strand, 48035455 - 48035346
Alignment:
Q  287 ataattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtc 386  Q
    |||| ||| |||||||||||||  ||   ||||||||||||||||    ||||| |||| |||| ||||||| |||||| ||||||| ||||  || |||    
T  48035455 ataaatttatggcttaatacatgctttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtc 48035356  T
Q  387 ttatgccgtt 396  Q
    ||||||||||    
T  48035355 ttatgccgtt 48035346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 5e-27; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 298 - 472
Target Start/End: Complemental strand, 18139607 - 18139433
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   ||||||||||||||||   |||||| ||||||||  ||||||| |||||| |||| || ||||  ||  |||| ||||||||    
T  18139607 gcttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgttt 18139508  T
Q  398 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||||||| ||| ||||  |||||||| |||||||||| ||||||||||||||| |||||||||| |||| ||||    
T  18139507 attgttttggtcctctccattagtttttaacatcaaatgtctaaggtgaaccatgtttaaagatgatccaccata 18139433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 14328876 - 14328720
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||  |||| |||| || |||||| | |||| ||| ||||     
T  14328876 tcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctcc 14328777  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||| |||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  14328776 gttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 14328720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 316 - 472
Target Start/End: Complemental strand, 14421886 - 14421730
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||  |||| |||| || |||||| | |||| ||| ||||     
T  14421886 tcccttaacttattttattttctcagtttgatcccttaactattaagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctcc 14421787  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    |||| |||| ||| | |||| ||||||||||||||  |||| || ||||||| ||||    
T  14421786 gttactttttaaccttaaatgtctaaggtgaaccaactttataggtggtccaccata 14421730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 316 - 388
Target Start/End: Original strand, 13800045 - 13800117
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |||| |||| ||||    
T  13800045 tcccttaacttattttattttctcagtttggtcccttaactattaattgtgtcaatttggtcccataaatctt 13800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 472
Target Start/End: Original strand, 31738358 - 31738533
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| ||||||||| ||| |||    
T  31738358 ggcttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtt 31738457  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    ||   |||| ||| |||| ||||||||| ||| | |||| ||||| ||||||||  |||| ||| |||||| ||||    
T  31738458 taccattttggtcctctccgttagtttttaaccttaaatgtctaatgtgaaccaactttatagacggtccaccata 31738533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 467
Target Start/End: Complemental strand, 13507184 - 13507122
Alignment:
Q  405 tagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||    
T  13507184 tagtcatctctgttagtttttaacatcaaatgtttaaggtgaaccatatttaaaggtggtcca 13507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 525 - 578
Target Start/End: Complemental strand, 34084127 - 34084074
Alignment:
Q  525 accgttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  34084127 accgttgaattatgtagggtctattgtactttactgtgaaccactaacacctaa 34084074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 291 - 421
Target Start/End: Complemental strand, 8412443 - 8412313
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||||||||||||||||  ||   |||||||||||||||| | |||||| |||  |||| ||||||| |||||| ||||||| |||| |||| |||| |    
T  8412443 ttttttggcttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgt 8412344  T
Q  391 gccgtttattgttttagtcatctctgttagt 421  Q
    |||||||| | |||| ||| |||| ||||||    
T  8412343 gccgtttactattttggtcctctccgttagt 8412313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 14326141 - 14326239
Alignment:
Q  290 attttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||||||| |||||||||||   |  ||||||||||||||||||||| ||||||||||||||||| |||| || || ||||||| |||| |||| ||||    
T  14326141 attttttgacttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattctt 14326239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 290 - 388
Target Start/End: Original strand, 14419151 - 14419249
Alignment:
Q  290 attttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtctt 388  Q
    |||||||| |||||||||||   |  ||||||||||||||||||||| ||||||||||||||||| |||| || || ||||||| |||| |||| ||||    
T  14419151 attttttgacttaatacatcccccgatcccttaacttattttattttctcagtttgatcccttaattattgagcgtctcaatttggtcccataattctt 14419249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 31740370 - 31740292
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    |||||||||||| | |||||| |||| |||||||||||| |||||| ||||||| |||| |||| ||||||||||||||    
T  31740370 ttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgttta 31740292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 377
Target Start/End: Original strand, 1692064 - 1692149
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtc 377  Q
    |||| |||||||||||||   || |||||||| |||||||| |||||||||||| || |||||||||||| ||| |||||||||||    
T  1692064 ttttaggcttaatacatcccccagtcccttaatttattttaatttttcagtttggtctcttaactattaaatgtttcaatttagtc 1692149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 298 - 479
Target Start/End: Complemental strand, 33802137 - 33801956
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   ||||||||||||||||   |||||| |||| |||| ||||||| |||||| | |||||  ||| |||| |||| ||  ||||    
T  33802137 gcttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagttt 33802038  T
Q  398 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgcctta 479  Q
    |  || || ||| |||| ||||||||| |||||||||||||||||||  |||||  || ||| ||||||| ||||| |||||    
T  33802037 accgtattggtcctctccgttagtttttaacatcaaatatctaaggtagaccatgattcaaggtggtccaccatatacctta 33801956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 295 - 379
Target Start/End: Complemental strand, 1757617 - 1757533
Alignment:
Q  295 ttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||| | |  ||||||||||||||||| ||| |||||||| |||||||||||||||  || ||||||| |||||    
T  1757617 ttggcttaatacatcctccggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcct 1757533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 16269867 - 16269819
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaagtgtgt 367  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16269867 cttaacttattttattttctcagtttgatctcttaactattaagtgtgt 16269819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 22300005 - 22299897
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   |||||| |||| |||| ||||||| |||||| ||||||| |||| |||| |||| ||||||||| | |||| ||||||||     
T  22300005 tcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctcc 22299906  T
Q  416 gttagtttt 424  Q
    |||| ||||    
T  22299905 gttattttt 22299897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 292 - 358
Target Start/End: Complemental strand, 5693713 - 5693647
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactat 358  Q
    ||||||||||||||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||    
T  5693713 tttttggcttaatacatcccccgatcccttaacttattttattttctcaatttgatcccttaactat 5693647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 297 - 398
Target Start/End: Original strand, 5311274 - 5311375
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| ||   ||||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||||||||| ||||||| ||||    
T  5311274 ggcttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtt 5311373  T
Q  397 ta 398  Q
    ||    
T  5311374 ta 5311375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 27440295 - 27440146
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   ||||||||||||||||    ||||| ||||||||||||||| | || ||| ||||||| |||| |||| |||| | ||||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 27440196  T
Q  398 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 447  Q
    | | |||| ||| |||| |||| |||| ||| | |||| |||||||||||    
T  27440195 actattttggtcctctccgttaatttttaactttaaatgtctaaggtgaa 27440146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 299 - 419
Target Start/End: Original strand, 8411083 - 8411203
Alignment:
Q  299 cttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttta 398  Q
    ||||||||||| || | | ||||||||||||||   |||||| |||  |||| ||||||| |||||| ||||||| ||| ||||| ||||||||||||||    
T  8411083 cttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgttta 8411182  T
Q  399 ttgttttagtcatctctgtta 419  Q
     | |||| ||| |||| ||||    
T  8411183 ctattttggtcctctccgtta 8411203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 27108295 - 27108231
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||| |||| ||  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  27108295 ggcttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaa 27108231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 361
Target Start/End: Complemental strand, 27150092 - 27150028
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||| |||| ||  ||||||||||||||||| ||| |||||||| |||||||||||||||    
T  27150092 ggcttaatagatctctcggtcccttaacttattttaatttctcagtttggtcccttaactattaa 27150028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 1693079 - 1693038
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaa 361  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  1693079 ttaacttattttaatttttcagtttggtcccttaactattaa 1693038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 9927620 - 9927687
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    |||||||||||||||| | |||| |||||| |||| ||||||| |||||| ||||||| |||| ||||    
T  9927620 tcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataa 9927687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 16251675 - 16251632
Alignment:
Q  319 cttaacttattttattttttcagtttgatcccttaactattaag 362  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||    
T  16251675 cttaaattattttattttttcagtttggtcccttaattattaag 16251632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 27107195 - 27107258
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||| | | ||||||| |||||    
T  27107195 tcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcct 27107258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 27149001 - 27149064
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||| | | ||||||| |||||    
T  27149001 tcccttaacttattttaatttctcagtttgatcaattaactattaaatatttcaatttggtcct 27149064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 11724417 - 11724335
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||||||||  ||  ||||||||||||||||| |||||| || || || ||||||||||||  || ||||||| |||||    
T  11724417 ggcttaatacatccctcgatcccttaacttattttaatttttcggtgtggtcacttaactattaaacgtttcaatttggtcct 11724335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 665 - 727
Target Start/End: Complemental strand, 11801183 - 11801121
Alignment:
Q  665 ttaaacctactatttaatcaccacacaaccatcattatcatcgtcatctataatcattaacac 727  Q
    ||||||| | |||||||| || |||| ||||||||| ||||| |||||||||||||| |||||    
T  11801183 ttaaaccaattatttaattactacaccaccatcattgtcatcttcatctataatcatcaacac 11801121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 424
Target Start/End: Original strand, 27438779 - 27438912
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||| || |||||||||| ||   ||||||||||||||||    ||||| |||| ||| |||||||| |||||| |||||||  ||| |||| | || |    
T  27438779 tttttaggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattct 27438878  T
Q  391 gccgtttattgttttagtcatctctgttagtttt 424  Q
    |||||||| | |||| |||||||| |||| ||||    
T  27438879 gccgtttactcttttggtcatctccgttaatttt 27438912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 298 - 383
Target Start/End: Original strand, 33129277 - 33129362
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataa 383  Q
    |||| ||||| |||||  ||| |||| |||||||| |||||||||||  || ||||||||| |||||| ||||||| ||| |||||    
T  33129277 gctttatacacctttcggtcctttaatttattttaatttttcagtttagtctcttaactataaagtgtctcaatttggtcttataa 33129362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 33807703 - 33807760
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||||||||||   |||||| |||| |||||||||||| |||||| |||||||    
T  33807703 tcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaattt 33807760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 316 - 467
Target Start/End: Complemental strand, 56802 - 56651
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||||||||||| |  ||||| |||| |||| ||| ||| |||||| ||||||| ||||||||| |||| ||||||||| |||||   || |||||    
T  56802 tcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttactgtttagatcctctct 56703  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtcca 467  Q
     |||||||| ||||||||||||||||||  ||| || |||||||||||||||    
T  56702 attagtttttaacatcaaatatctaagggaaactatgtttaaagatggtcca 56651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 56; Significance: 8e-23; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 316 - 483
Target Start/End: Complemental strand, 13306 - 13139
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    ||||||||||||||||   ||||||||||| |||| ||||||| || ||| ||||||| |||| |||| |||| | |||||   | |||| ||| | ||     
T  13306 tcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttccgttacctcttttggtcctatcc 13207  T
Q  416 gttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
     |||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||    
T  13206 attaggttttaacatcaaatgtctaaggtgaaccatatttaaagatggtccaccatataccctactaa 13139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 613 - 757
Target Start/End: Complemental strand, 12992 - 12843
Alignment:
Q  613 atcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcg 707  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  |     |||| ||||| || | ||||||||| |||||||||||||| |||||     
T  12992 atcttcaacaacaatttcatcaataaaattcagaaaattccaaaaaaataaaaataaataaacatattctttaatcactacacaaccatcattgtcatct 12893  T
Q  708 tcatctataatcattaacaccattcttcttaaatattattcttcatcttc 757  Q
    |||||||| || || |||||| |||||| |||||||||||||||||||||    
T  12892 tcatctatcattatcaacacccttcttcctaaatattattcttcatcttc 12843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 602
Target Start/End: Complemental strand, 13094 - 13020
Alignment:
Q  528 gttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttcttc 602  Q
    |||||||  |||||| |||||||||||||| ||| ||||||||||| ||||   ||||||||||| |||||||||    
T  13094 gttgaattttgtagggtctattgtactttattgtcaaccactaacatctaataaaatccattcatcttcttcttc 13020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 472
Target Start/End: Original strand, 15945 - 16115
Alignment:
Q  297 ggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtt 396  Q
    ||||||||||||| | |  ||||||||||||||||||||||||| |||| ||||||| |||| |||| | ||||     ||| ||||  |||||||||||    
T  15945 ggcttaatacatcctccggtcccttaacttattttattttttcactttggtcccttagctataaagtatttcaa-----tcccataaaccttatgccgtt 16039  T
Q  397 tattgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcata 472  Q
    || | |||||||| |||| ||||||||| ||| | |||| |||||| |||||||  |||| |||||||||| ||||    
T  16040 tactattttagtcctctccgttagtttttaaccttaaatgtctaagatgaaccaactttatagatggtccaccata 16115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 320 - 415
Target Start/End: Complemental strand, 17258 - 17163
Alignment:
Q  320 ttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattgttttagtcatctct 415  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||| |||| || | |||| | |||||||| |||||    
T  17258 ttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttaatccaataactcttctgtcatttactattttagtcctctct 17163  T

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Target: scaffold0046 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 613 - 757
Target Start/End: Original strand, 23755 - 23904
Alignment:
Q  613 atcttgaacaacaacttcatcaataaaatctagaaaatcccaaaacta-----ataattaaacctactatttaatcaccacacaaccatcattatcatcg 707  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||  |     |||| ||||| || | ||||||||| | |||| ||| ||| |||||     
T  23755 atctttaacaacaacttcatcaataaaatccagaaaattccaaaaaaataaaaataaataaacatattctttaatcactatacaatcataattgtcatct 23854  T
Q  708 tcatctataatcattaacaccattcttcttaaatattattcttcatcttc 757  Q
    |||||||| || || ||| || |||||| |||||||||||||||||||||    
T  23855 tcatctatcattatcaactcccttcttcctaaatattattcttcatcttc 23904  T

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Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 599
Target Start/End: Original strand, 23674 - 23727
Alignment:
Q  546 tattgtactttactgtgaaccactaacacctaagttaatccattcatattcttc 599  Q
    |||||||||||||||| ||||||||||| ||||   ||||||||||| ||||||    
T  23674 tattgtactttactgtcaaccactaacatctaataaaatccattcatcttcttc 23727  T

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Target: scaffold0015 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 402 - 483
Target Start/End: Complemental strand, 207814 - 207733
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggtccagcatatgccttactaa 483  Q
    |||| ||| |||| ||||||||| |||||||||| ||| ||||||||||| ||||||| ||||||| |||||||||||||||    
T  207814 ttttggtcctctccgttagtttttaacatcaaatgtcttaggtgaaccatgtttaaaggtggtccaccatatgccttactaa 207733  T

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Target: scaffold0015; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 599
Target Start/End: Complemental strand, 207672 - 207617
Alignment:
Q  544 tctattgtactttactgtgaaccactaacacctaagttaatccattcatattcttc 599  Q
    |||||||||||||||||||||||||||||| || |   ||||||||||| ||||||    
T  207672 tctattgtactttactgtgaaccactaacatctgataaaatccattcatcttcttc 207617  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 302 - 467
Target Start/End: Complemental strand, 77297 - 77130
Alignment:
Q  302 aatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgtttattg 401  Q
    |||||||| || | || ||||||||||||| | |||||| |||| || | ||||||| ||| || ||||||| |||| |||| | || | ||||||| ||    
T  77297 aatacatcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactg 77198  T
Q  402 ttttagtcatctctgttagttttgaacatcaaatat--ctaaggtgaaccatatttaaagatggtcca 467  Q
    |||| ||| |||| |||| | ||  ||||||||| |  |||||||||||||||||||||| |||||||    
T  77197 ttttggtcttctccgttaatgtttgacatcaaatgtgtctaaggtgaaccatatttaaaggtggtcca 77130  T

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Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 529 - 578
Target Start/End: Complemental strand, 39790 - 39741
Alignment:
Q  529 ttgaatcatgtaggatctattgtactttactgtgaaccactaacacctaa 578  Q
    |||||| ||||||| |||||||||||||||||||||||||||||| ||||    
T  39790 ttgaattatgtagggtctattgtactttactgtgaaccactaacatctaa 39741  T

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Target: scaffold0051; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 39917 - 39855
Alignment:
Q  402 ttttagtcatctctgttagttttgaacatcaaatatctaaggtgaaccatatttaaagatggt 464  Q
    |||| ||| |||||||||||||| |||||||||  ||||||||||| ||||||||||| ||||    
T  39917 ttttggtcctctctgttagtttttaacatcaaaagtctaaggtgaatcatatttaaaggtggt 39855  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 298 - 447
Target Start/End: Original strand, 47066 - 47215
Alignment:
Q  298 gcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatgccgttt 397  Q
    |||||||||||| ||   ||||||||||||||||    ||||| ||||||||||||||| | || ||| ||||||| |||| |||| |||| | ||||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttt 47165  T
Q  398 attgttttagtcatctctgttagttttgaacatcaaatatctaaggtgaa 447  Q
    | | |||| ||| |||| |||| |||| ||| | |||| |||||||||||    
T  47166 actattttggtcctctccgttaatttttaactttaaatgtctaaggtgaa 47215  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 424
Target Start/End: Complemental strand, 48583 - 48450
Alignment:
Q  291 ttttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttat 390  Q
    ||||| || |||||||||| ||   ||||||||||||||||    ||||| |||| ||| |||||||| |||||| |||||||  ||| |||| | || |    
T  48583 tttttaggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattct 48484  T
Q  391 gccgtttattgttttagtcatctctgttagtttt 424  Q
    |||||||| | |||| |||||||| |||| ||||    
T  48483 gccgtttactcttttggtcatctccgttaatttt 48450  T

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Target: scaffold0166 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 373
Target Start/End: Complemental strand, 4346 - 4263
Alignment:
Q  289 aattttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaattt 373  Q
    ||||||||| |||||||||||  | | ||||||||||||||||||||| | |||||  |||||||| |||||||||| |||||||    
T  4346 aattttttgacttaatacatccct-agtcccttaacttattttattttcttagtttagtcccttaattattaagtgtctcaattt 4263  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 296 - 379
Target Start/End: Complemental strand, 205674 - 205591
Alignment:
Q  296 tggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    |||||||||||||||  |  ||||||||||||||||| ||| |||||||| |||||||| ||||||  || ||||||| |||||    
T  205674 tggcttaatacatctcccggtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtcct 205591  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 356
Target Start/End: Complemental strand, 5107 - 5067
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaact 356  Q
    |||||||||||||||| || |||||||||||||||||||||    
T  5107 tcccttaacttatttttttgtttcagtttgatcccttaact 5067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 316 - 379
Target Start/End: Complemental strand, 85178 - 85115
Alignment:
Q  316 tcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcct 379  Q
    ||||||||||||||||| ||| ||||| || |||||||||||||||  || ||||||| |||||    
T  85178 tcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcct 85115  T

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Target: scaffold2127 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 292 - 421
Target Start/End: Complemental strand, 641 - 512
Alignment:
Q  292 tttttggcttaatacatctttcactcccttaacttattttattttttcagtttgatcccttaactattaagtgtgtcaatttagtcctataagtcttatg 391  Q
    |||| ||||||||||||| ||   ||| ||||||||||||   |||||| || | |||| ||||||| |||||| ||||||| ||   |||| |||||||    
T  641 ttttaggcttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatg 542  T
Q  392 ccgtttattgttttagtcatctctgttagt 421  Q
    ||||||| | |||| ||| |||| ||||||    
T  541 ccgtttactattttggtcctctccgttagt 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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