View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11833_high_49 (Length: 226)
Name: NF11833_high_49
Description: NF11833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11833_high_49 |
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Alignment Details
Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 41381595 - 41381469
Alignment:
| Q |
1 |
cactctcacacttatcactctcctctagtactacttatacttacttcagtcactcagtgcgttttgttggagagagagaaaaaggattggttcttcttca |
100 |
Q |
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| T |
41381595 |
cactctcacacttatcactctcctctagtactacttatacttacttcagtcactcagtgcgttttgttggagagagagaaaaagggttggttcttcttca |
41381496 |
T |
|
| Q |
101 |
aacactgtcttcctgttcttcaagcat |
127 |
Q |
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|||||||| |||||||||||||||||| |
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| T |
41381495 |
aacactgtgttcctgttcttcaagcat |
41381469 |
T |
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