View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11833_low_5 (Length: 525)

Name: NF11833_low_5
Description: NF11833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11833_low_5
NF11833_low_5
[»] chr7 (41 HSPs)
chr7 (8-242)||(3304638-3304870)
chr7 (8-243)||(47202541-47202767)
chr7 (8-242)||(8154946-8155178)
chr7 (8-241)||(31643088-31643318)
chr7 (8-243)||(3936155-3936388)
chr7 (8-243)||(36468416-36468649)
chr7 (64-241)||(9151897-9152074)
chr7 (57-243)||(33573922-33574108)
chr7 (58-231)||(42925531-42925705)
chr7 (62-243)||(42864981-42865162)
chr7 (8-211)||(28230379-28230580)
chr7 (58-240)||(36408466-36408648)
chr7 (58-243)||(36629300-36629483)
chr7 (58-231)||(1518802-1518975)
chr7 (58-227)||(33151303-33151467)
chr7 (63-240)||(24690215-24690393)
chr7 (299-468)||(18657990-18658162)
chr7 (83-231)||(19818500-19818648)
chr7 (58-239)||(31985400-31985581)
chr7 (60-243)||(19225477-19225660)
chr7 (60-243)||(36946171-36946353)
chr7 (118-231)||(43737237-43737350)
chr7 (58-162)||(24042148-24042252)
chr7 (110-241)||(7115151-7115282)
chr7 (57-200)||(5278358-5278501)
chr7 (58-184)||(37518233-37518359)
chr7 (64-242)||(6467020-6467198)
chr7 (151-239)||(26555040-26555128)
chr7 (58-191)||(16983673-16983806)
chr7 (65-231)||(48776100-48776268)
chr7 (58-153)||(48775705-48775798)
chr7 (136-242)||(37398771-37398877)
chr7 (60-222)||(48705899-48706061)
chr7 (68-177)||(43185887-43185996)
chr7 (64-243)||(39581840-39582019)
chr7 (58-155)||(8214257-8214354)
chr7 (100-161)||(8214462-8214523)
chr7 (170-243)||(37518142-37518215)
chr7 (482-521)||(21123071-21123110)
chr7 (58-104)||(6467793-6467839)
chr7 (189-241)||(47239570-47239622)
[»] chr8 (39 HSPs)
chr8 (8-243)||(31519771-31520004)
chr8 (8-240)||(21004436-21004661)
chr8 (8-227)||(42280786-42281003)
chr8 (58-231)||(8885344-8885517)
chr8 (58-243)||(27927820-27928005)
chr8 (8-243)||(44106270-44106503)
chr8 (57-241)||(9073598-9073782)
chr8 (58-231)||(3094780-3094953)
chr8 (62-243)||(34853427-34853608)
chr8 (58-243)||(36165716-36165902)
chr8 (58-243)||(11698195-11698380)
chr8 (58-231)||(14163948-14164121)
chr8 (58-243)||(17119758-17119943)
chr8 (58-242)||(40392631-40392815)
chr8 (64-243)||(28916876-28917055)
chr8 (81-242)||(40328015-40328176)
chr8 (83-241)||(36980689-36980847)
chr8 (66-230)||(1076659-1076822)
chr8 (60-231)||(4259528-4259697)
chr8 (58-239)||(36317887-36318072)
chr8 (58-154)||(40994887-40994983)
chr8 (65-227)||(28423523-28423684)
chr8 (8-155)||(37248605-37248750)
chr8 (65-243)||(6395186-6395364)
chr8 (65-155)||(16310701-16310791)
chr8 (63-231)||(8621528-8621697)
chr8 (106-231)||(34645520-34645645)
chr8 (57-215)||(39093602-39093760)
chr8 (63-155)||(7982478-7982570)
chr8 (86-154)||(31234486-31234554)
chr8 (58-162)||(33472166-33472270)
chr8 (58-162)||(33472373-33472477)
chr8 (86-169)||(10833468-10833551)
chr8 (100-169)||(9845323-9845392)
chr8 (67-230)||(7981618-7981781)
chr8 (62-162)||(10840717-10840817)
chr8 (58-143)||(9845488-9845573)
chr8 (106-150)||(24627717-24627761)
chr8 (100-150)||(41530812-41530862)
[»] chr1 (40 HSPs)
chr1 (8-243)||(18583423-18583656)
chr1 (8-243)||(33611289-33611522)
chr1 (57-243)||(23442832-23443018)
chr1 (8-243)||(49786316-49786548)
chr1 (8-243)||(34162600-34162833)
chr1 (57-231)||(45046741-45046915)
chr1 (72-231)||(41584556-41584715)
chr1 (60-243)||(52744722-52744905)
chr1 (8-243)||(49677530-49677763)
chr1 (57-231)||(7011304-7011478)
chr1 (58-231)||(15069732-15069905)
chr1 (65-243)||(17000480-17000659)
chr1 (72-243)||(45567769-45567940)
chr1 (58-243)||(28866509-28866694)
chr1 (58-243)||(42546062-42546248)
chr1 (58-241)||(40650556-40650739)
chr1 (58-243)||(34006355-34006541)
chr1 (8-176)||(32817557-32817723)
chr1 (8-243)||(40907813-40908046)
chr1 (59-243)||(26723367-26723551)
chr1 (57-241)||(27794925-27795108)
chr1 (57-198)||(44573021-44573161)
chr1 (60-243)||(24472706-24472889)
chr1 (59-231)||(3561226-3561398)
chr1 (123-231)||(38885373-38885481)
chr1 (59-231)||(42928980-42929152)
chr1 (100-242)||(25563294-25563436)
chr1 (1-133)||(32542436-32542563)
chr1 (89-239)||(6223634-6223779)
chr1 (58-153)||(890609-890704)
chr1 (58-169)||(9446048-9446159)
chr1 (86-162)||(9445846-9445922)
chr1 (60-104)||(38885324-38885368)
chr1 (57-168)||(26230145-26230256)
chr1 (186-239)||(890748-890801)
chr1 (86-162)||(43318940-43319016)
chr1 (99-162)||(800552-800615)
chr1 (136-231)||(45880000-45880095)
chr1 (57-153)||(8704487-8704583)
chr1 (60-92)||(14912968-14913000)
[»] chr3 (49 HSPs)
chr3 (8-243)||(43472848-43473081)
chr3 (10-243)||(2358501-2358732)
chr3 (58-243)||(52777326-52777511)
chr3 (8-239)||(47302066-47302294)
chr3 (60-243)||(50716349-50716533)
chr3 (60-243)||(50796314-50796498)
chr3 (8-243)||(28873050-28873286)
chr3 (58-242)||(3351946-3352130)
chr3 (8-243)||(38977627-38977860)
chr3 (57-243)||(34821222-34821408)
chr3 (8-242)||(35142121-35142353)
chr3 (8-231)||(3902697-3902918)
chr3 (73-231)||(47123136-47123294)
chr3 (65-243)||(49096105-49096284)
chr3 (73-231)||(47130502-47130660)
chr3 (64-231)||(501032-501199)
chr3 (58-231)||(46622686-46622848)
chr3 (64-243)||(47739812-47739990)
chr3 (65-231)||(51258505-51258672)
chr3 (57-242)||(30721690-30721869)
chr3 (58-211)||(51540525-51540678)
chr3 (58-243)||(39149904-39150089)
chr3 (57-147)||(3937473-3937563)
chr3 (138-243)||(3938357-3938462)
chr3 (58-173)||(33438616-33438731)
chr3 (66-239)||(5127782-5127955)
chr3 (57-229)||(40062473-40062645)
chr3 (100-243)||(35345788-35345931)
chr3 (58-243)||(51492894-51493080)
chr3 (106-231)||(46624863-46624988)
chr3 (64-230)||(29048444-29048610)
chr3 (65-231)||(47979895-47980063)
chr3 (58-243)||(54229776-54229961)
chr3 (58-231)||(14828809-14828983)
chr3 (60-231)||(47769359-47769530)
chr3 (126-243)||(4300159-4300276)
chr3 (166-231)||(33439384-33439449)
chr3 (58-153)||(45712053-45712148)
chr3 (65-187)||(27143351-27143473)
chr3 (59-151)||(26053491-26053584)
chr3 (58-177)||(29035893-29036013)
chr3 (100-162)||(8735530-8735592)
chr3 (100-162)||(9087771-9087833)
chr3 (98-162)||(33842034-33842098)
chr3 (58-129)||(29035809-29035880)
chr3 (87-150)||(45244514-45244577)
chr3 (68-177)||(46555445-46555554)
chr3 (86-150)||(8735309-8735373)
chr3 (86-150)||(9087550-9087614)
[»] chr4 (52 HSPs)
chr4 (11-242)||(34972922-34973151)
chr4 (57-242)||(6228693-6228878)
chr4 (8-243)||(32441866-32442098)
chr4 (57-239)||(6003556-6003738)
chr4 (57-242)||(49397110-49397299)
chr4 (8-243)||(41412977-41413212)
chr4 (62-241)||(53893906-53894085)
chr4 (8-231)||(2505922-2506143)
chr4 (60-243)||(25491274-25491457)
chr4 (58-243)||(40703767-40703952)
chr4 (61-230)||(48318956-48319125)
chr4 (8-231)||(19835575-19835796)
chr4 (58-240)||(17933019-17933201)
chr4 (58-242)||(55052498-55052683)
chr4 (8-231)||(31582313-31582534)
chr4 (8-243)||(25752322-25752556)
chr4 (8-243)||(46440151-46440386)
chr4 (58-230)||(7931760-7931931)
chr4 (57-243)||(8106495-8106682)
chr4 (128-243)||(54631371-54631486)
chr4 (58-239)||(38536273-38536455)
chr4 (85-243)||(52089315-52089473)
chr4 (67-231)||(27742004-27742169)
chr4 (82-231)||(41322983-41323132)
chr4 (58-231)||(7863544-7863717)
chr4 (66-216)||(3703155-3703305)
chr4 (82-227)||(25538873-25539019)
chr4 (65-231)||(14474103-14474268)
chr4 (150-239)||(29822775-29822864)
chr4 (58-199)||(27879651-27879792)
chr4 (106-243)||(47456751-47456888)
chr4 (8-119)||(23523961-23524071)
chr4 (58-200)||(37222064-37222206)
chr4 (183-243)||(38417020-38417080)
chr4 (164-231)||(49001451-49001518)
chr4 (59-189)||(42497809-42497939)
chr4 (60-154)||(49002822-49002916)
chr4 (58-162)||(25140466-25140570)
chr4 (58-150)||(25140687-25140779)
chr4 (68-155)||(47784101-47784188)
chr4 (98-182)||(47873953-47874037)
chr4 (136-239)||(55838875-55838978)
chr4 (60-109)||(29822724-29822773)
chr4 (100-150)||(25140894-25140944)
chr4 (184-236)||(4936614-4936666)
chr4 (136-232)||(55774704-55774800)
chr4 (136-199)||(1788175-1788238)
chr4 (65-131)||(38416937-38417004)
chr4 (118-177)||(39118308-39118367)
chr4 (126-239)||(20078719-20078832)
chr4 (110-211)||(46381079-46381180)
chr4 (58-150)||(32600943-32601035)
[»] chr5 (52 HSPs)
chr5 (9-243)||(20891623-20891855)
chr5 (58-243)||(7884250-7884435)
chr5 (58-231)||(38871728-38871901)
chr5 (8-243)||(4064598-4064832)
chr5 (58-231)||(32841861-32842035)
chr5 (58-243)||(31221218-31221403)
chr5 (58-231)||(39524833-39525006)
chr5 (87-243)||(12464998-12465154)
chr5 (58-243)||(33487667-33487853)
chr5 (59-231)||(6156789-6156961)
chr5 (63-231)||(37183672-37183840)
chr5 (8-243)||(38692662-38692894)
chr5 (58-243)||(15957806-15957991)
chr5 (58-243)||(31929004-31929188)
chr5 (64-231)||(15799288-15799455)
chr5 (62-231)||(28083269-28083438)
chr5 (58-242)||(29862669-29862854)
chr5 (78-243)||(14111944-14112107)
chr5 (8-157)||(26190263-26190410)
chr5 (8-242)||(24203564-24203796)
chr5 (58-243)||(38372366-38372543)
chr5 (57-243)||(26095148-26095334)
chr5 (64-242)||(40619865-40620048)
chr5 (58-243)||(12847500-12847685)
chr5 (58-231)||(13908605-13908778)
chr5 (58-243)||(23269391-23269579)
chr5 (58-231)||(27212766-27212934)
chr5 (58-144)||(25747082-25747168)
chr5 (61-231)||(27158144-27158314)
chr5 (135-231)||(26898694-26898790)
chr5 (58-241)||(40613556-40613739)
chr5 (58-227)||(41639385-41639557)
chr5 (64-169)||(21070429-21070534)
chr5 (57-169)||(8738938-8739050)
chr5 (65-231)||(6800818-6800984)
chr5 (177-243)||(26190201-26190267)
chr5 (58-152)||(27494123-27494217)
chr5 (136-242)||(33901094-33901200)
chr5 (58-162)||(16429339-16429443)
chr5 (57-173)||(26093502-26093618)
chr5 (58-241)||(26622170-26622350)
chr5 (60-162)||(8739148-8739250)
chr5 (58-142)||(1350290-1350374)
chr5 (60-231)||(41253359-41253530)
chr5 (100-162)||(28445169-28445231)
chr5 (140-221)||(7036677-7036758)
chr5 (86-153)||(34530300-34530367)
chr5 (100-162)||(8973569-8973631)
chr5 (63-200)||(11186097-11186234)
chr5 (97-169)||(16429168-16429240)
chr5 (86-146)||(28445381-28445441)
chr5 (100-150)||(38641033-38641083)
[»] chr2 (36 HSPs)
chr2 (58-243)||(32187743-32187928)
chr2 (57-211)||(36948851-36949005)
chr2 (57-242)||(39447256-39447441)
chr2 (62-242)||(41510304-41510483)
chr2 (58-243)||(41203060-41203245)
chr2 (58-231)||(33452329-33452502)
chr2 (8-243)||(15994987-15995220)
chr2 (57-243)||(5507513-5507699)
chr2 (62-243)||(42894476-42894657)
chr2 (58-211)||(44465633-44465786)
chr2 (58-243)||(41854778-41854958)
chr2 (58-231)||(34517196-34517369)
chr2 (64-240)||(19109892-19110068)
chr2 (59-228)||(16750318-16750485)
chr2 (68-231)||(25217660-25217825)
chr2 (62-231)||(36875084-36875253)
chr2 (58-221)||(8388746-8388909)
chr2 (64-200)||(45153708-45153844)
chr2 (58-209)||(17474707-17474858)
chr2 (65-231)||(35251032-35251198)
chr2 (118-241)||(30763804-30763927)
chr2 (66-243)||(42478846-42479023)
chr2 (110-243)||(38308706-38308840)
chr2 (65-239)||(45293743-45293916)
chr2 (57-227)||(26228160-26228330)
chr2 (106-232)||(37773700-37773827)
chr2 (100-162)||(17766784-17766846)
chr2 (166-239)||(13704690-13704763)
chr2 (97-151)||(9847386-9847440)
chr2 (100-162)||(34519492-34519554)
chr2 (81-239)||(34817219-34817377)
chr2 (65-147)||(38066643-38066725)
chr2 (190-231)||(27670723-27670764)
chr2 (166-231)||(38065463-38065528)
chr2 (100-162)||(9847167-9847229)
chr2 (81-177)||(33440450-33440545)
[»] chr6 (30 HSPs)
chr6 (58-241)||(4508183-4508366)
chr6 (58-239)||(5638957-5639138)
chr6 (58-243)||(23406891-23407077)
chr6 (67-243)||(2813103-2813280)
chr6 (58-231)||(3717173-3717347)
chr6 (8-230)||(14587452-14587672)
chr6 (8-243)||(17264457-17264690)
chr6 (64-229)||(1945423-1945588)
chr6 (96-243)||(21514910-21515057)
chr6 (58-241)||(29519374-29519557)
chr6 (58-231)||(2539546-2539719)
chr6 (64-243)||(5699666-5699846)
chr6 (65-222)||(24604261-24604418)
chr6 (58-231)||(13800918-13801091)
chr6 (83-240)||(9905234-9905392)
chr6 (58-227)||(7734221-7734390)
chr6 (118-219)||(32044537-32044638)
chr6 (81-241)||(34528558-34528718)
chr6 (60-243)||(29289504-29289687)
chr6 (65-240)||(6704009-6704183)
chr6 (58-242)||(14037845-14038026)
chr6 (8-121)||(32035160-32035266)
chr6 (68-239)||(236899-237069)
chr6 (104-230)||(16450355-16450481)
chr6 (200-243)||(33413365-33413408)
chr6 (106-231)||(3365808-3365933)
chr6 (126-242)||(10310311-10310427)
chr6 (100-151)||(17501003-17501054)
chr6 (8-49)||(7412875-7412916)
chr6 (184-241)||(7412971-7413028)
[»] scaffold0027 (1 HSPs)
scaffold0027 (64-243)||(141843-142021)
[»] scaffold0508 (1 HSPs)
scaffold0508 (58-243)||(3273-3459)
[»] scaffold0137 (1 HSPs)
scaffold0137 (58-239)||(9380-9561)
[»] scaffold0010 (1 HSPs)
scaffold0010 (98-243)||(140620-140765)
[»] scaffold0182 (1 HSPs)
scaffold0182 (89-162)||(23228-23301)
[»] scaffold0006 (2 HSPs)
scaffold0006 (64-227)||(59865-60028)
scaffold0006 (83-154)||(59480-59551)
[»] scaffold0564 (1 HSPs)
scaffold0564 (63-231)||(4471-4639)


Alignment Details
Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 3304870 - 3304638
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||||||||||||| |||||||||||| ||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3304870 gattacataatccaaaaaccccccaaacacccttttctaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 3304774  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||||||||||| ||    
T  3304773 ttgtaacatgtataaccattttagggacaatattaatcttcctaactcttatcattttgttttgggtcattgttacctgttcttagtcaaaaatcgggtt 3304674  T
Q  207 ttcgggctacttgatcggattgctctaaaacttccc 242  Q
     ||||||||||||||||||||||||| |||||||||    
T  3304673 ctcgggctacttgatcggattgctctgaaacttccc 3304638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 47202541 - 47202767
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47202541 gattacataatccggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 47202637  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||       | ||||||||||||||||||| ||    
T  47202638 ttgtaacatgtatagccgttttagggacaatattaatcttcctaactcttatccttttgttttgggtca-------tcgttcttagtcaaaaatcgggtt 47202730  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  47202731 ttcgggctacttgattggattgctcttaaacttcccc 47202767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 8154946 - 8155178
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||| ||||||||| |||||||||||||||||||       |||||||||||||||||||  || | ||||||||||||||||||||||||    
T  8154946 gattacataatccgaaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatctaaactctatcagcacaaatcctaaacatat 8155042  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||||| |||| |||||||||||||||||||| ||    
T  8155043 ttgtaacatgtatagccattttagggacaatatcaatcttcctagctcttatccttttgtttttggtcattattacctgttcttagtcaaaaatcgggtt 8155142  T
Q  207 ttcgggctacttgatcggattgctctaaaacttccc 242  Q
    ||||| ||||||||||| |||| ||| |||||||||    
T  8155143 ttcggactacttgatcgaattgttctgaaacttccc 8155178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 31643088 - 31643318
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| |||||||||||||||||||       ||||||||||||||||||| ||| || ||||||| |||||||||||||||    
T  31643088 gattacataatccggaaaccccccaaacacccttttttaaggtaaaa---tagttcggattatataatctgaactggatcagcataaatcctaaacatat 31643184  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||  |    
T  31643185 ttttaacatgtatagctattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgg-gt 31643283  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||| |||||||||||||||||||| ||||||||    
T  31643284 ttcggactacttgatcggattgctctgaaacttcc 31643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 3936155 - 3936388
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||||||||||||| ||||||||||||| |||||        ||| || ||||||||||||||| ||||| |||||||||  ||||||| |    
T  3936155 gattacataatccaaaaaccccctaaacaccctttttcaaggtaaaac---agtccgaattatataatccgaaatgtattagcacaaattgtaaacatgt 3936251  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| | |||||||||||||||||||||    
T  3936252 ttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctattttgggtcattgttacctattcttagtcaaaaatcggatt 3936351  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| || ||||||||||||||||  ||||||||||    
T  3936352 ttcggactgcttgatcggattgctccgaaacttcccc 3936388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 36468649 - 36468416
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||| | ||||||||||||||| ||||||||||||||| |||||||| |    
T  36468649 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttgaattatataatccgaactgtatcagcacaaattctaaacatgt 36468553  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||||| ||||||||||||||| ||||||| |||||| | |||||||||||| |||| |||||||||| ||||||||| ||    
T  36468552 ttgtaacatggatagtcattttaggaacaatattaatcttcataactctcatccttctgttttgggtcattgttacatgttcttagtaaaaaatcgggtt 36468453  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||||||||||||  ||||||||||    
T  36468452 ttcgggctacttgatcggattgctccgaaacttcccc 36468416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 64 - 241
Target Start/End: Original strand, 9151897 - 9152074
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||     
T  9151897 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttc 9151996  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    | |||||||||||| |||| |||||||||| ||||||||| |||| || |||||||||||||||||||  ||||||||    
T  9151997 tgttttgggtcattgttacatgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttcc 9152074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 33574108 - 33573922
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||| ||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||    
T  33574108 tagttcgaattatataatctgaactgtatgagcacaaatcataaacatatttgtaacatgtataactattttagggacaatattaatctttctaactctt 33574009  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||| ||||| |||||| |||| |||| ||| |||||||| || ||||||  |||||||||||||||||||| ||||||||||    
T  33574008 atccttttgttttgagtcattgttacatgtttttaatcaaaaattgggttttcgaactacttgatcggattgctctgaaacttcccc 33573922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 42925705 - 42925531
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  42925705 agttcggattatataatacgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 42925606  T
Q  158 tcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||    |||||| ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  42925605 tccttccgtttttggatcattgttacttgttcttagtcaaaaattgggttttcgggctacttgatcggattgctc 42925531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 42865162 - 42864981
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    |||||||||||||||||| ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  42865162 cggattatataatccgaactgtatcagcacaaattctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 42865063  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | | |||||||||||| | || ||||||| |||||||||| | ||||||| |||||||||||||||||||| |||| |||||    
T  42865062 tctgttttgggtcattgtcacctgttcttggtcaaaaatcaggttttcggactacttgatcggattgctctgaaacatcccc 42864981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 211
Target Start/End: Complemental strand, 28230580 - 28230379
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  28230580 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgt 28230484  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| || | ||||||||||||||| |||| ||    
T  28230483 ttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttgcatgttcttagtcaaaattcgggtt 28230384  T
Q  207 ttcgg 211  Q
    |||||    
T  28230383 ttcgg 28230379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 240
Target Start/End: Original strand, 36408466 - 36408648
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||| |||||||      
T  36408466 agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtaattttagggacaatattaatcttcttaactctct 36408565  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 240  Q
    | ||| | |||||||||||| |||| |||||||||||||||||  | ||||||| |||||||||||||||||||  |||||||    
T  36408566 ttcttctgttttgggtcattgttacgtgttcttagtcaaaaatttggttttcggactacttgatcggattgctccgaaacttc 36408648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 36629300 - 36629483
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||| ||||| ||||||   | ||||||||||| ||||||||||||||||||||| |    
T  36629300 agttcggattatataatccgaactgtatcagcgcaaattttaaacatgtttgttacatgtc--gtcattttagggagaatattaatcttcctaactctca 36629397  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||| ||| | |||| || ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  36629398 tccttctgttttggctcactgttacctggtcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 36629483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 1518802 - 1518975
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||  |||  ||||||| ||||||||||||||||| ||||||| |    
T  1518802 agttcggattatataatccgaactgtatcagcacaaattataaacatgtttgtaacatcgataatcattttatggacaatattaatcttcttaactctca 1518901  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| |||||||||| ||| |||  |||||||||| |||||| || ||||||| |||||||||||||||||||    
T  1518902 tccttctattttgggttattgttagctgttcttagtaaaaaatagggttttcggactacttgatcggattgctc 1518975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 227
Target Start/End: Original strand, 33151303 - 33151467
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||||| ||||     ||||||||||||||||||||||||||||| |    
T  33151303 agttcggattatataattcgaactgtatcagcacaaattctaaacatgtttgtaacatgaatag-----ttagggacaatattaatcttcctaactctca 33151397  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
    ||||| |||||||||||||| |||  ||||||||||||||||| || ||||| | |||||||||||||||    
T  33151398 tccttctattttgggtcattgttatctgttcttagtcaaaaattgggttttctgactacttgatcggatt 33151467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 63 - 240
Target Start/End: Complemental strand, 24690393 - 24690215
Alignment:
Q  63 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||||||||| ||| |||||||||| ||||  ||| ||| ||||||||||| || | ||||||| ||||||||||||||| ||||||||| ||||||    
T  24690393 ggattatataatctgaactgtatcagcataaattttaagcatgtttgtaacatggatcgtcattttatggacaatattaatctacctaactctcatcctt 24690294  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaatcgga-ttttcgggctacttgatcggattgctctaaaacttc 240  Q
    || |||||||||||| ||||  |||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||    
T  24690293 ttgttttgggtcattgttacccgttcttagtcaataatcggatttttcgggctacttgatcggattgctccgaaacttc 24690215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 299 - 468
Target Start/End: Complemental strand, 18658162 - 18657990
Alignment:
Q  299 gagaagcttcaaagcaacgaaaaa--tattgagtgatgaatgatgc-gaattagattgctccgtctcttgattttgagagaacatacgagaatttattaa 395  Q
    ||||||||||||||||| |||| |  | |||||||||||||||||  || ||||||| || |||||||||||||||||||||| |||||  ||| |||||    
T  18658162 gagaagcttcaaagcaatgaaagagtttttgagtgatgaatgatgttgagttagattacttcgtctcttgattttgagagaacgtacgatgattgattaa 18658063  T
Q  396 ccttcattatttatctttgcaaataatcttatatttgatcaataaacttgggtgaaagttgatttagaattga 468  Q
    ||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  18658062 cctacattctttatctttgcaaataatcttatatctgatcaataaacttaggtgaaagttgatgtagaattga 18657990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 83 - 231
Target Start/End: Original strand, 19818500 - 19818648
Alignment:
Q  83 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 182  Q
    ||||||||||||||||||||||  |||||||||| ||||  |||||||||||||||||||||||||||||||| |||||| | |||||||||||| ||||    
T  19818500 tatcagcacaaatcctaaacatgcttgtaacatggatagttattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttac 19818599  T
Q  183 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     ||||||| ||| |||||||| |||| || |||||||||||||||||||    
T  19818600 ctgttcttggtcgaaaatcgggtttttggactacttgatcggattgctc 19818648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 31985581 - 31985400
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| |||| ||||||| |||||||  ||||||||||| ||||||| |||| ||||||| |||||||||||||||| |||||||| |    
T  31985581 agttcggattatataattcgaactgtatcaacacaaattttaaacatatttttaacatgaatagtcattttatggacaatattaatctttctaactctca 31985482  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    || || | |||||||||||| |||   ||||||||||||||||| | |||| ||||||||||||| ||||| || |||||||    
T  31985481 tcattctgttttgggtcattgttaaccgttcttagtcaaaaatctggtttttgggctacttgatcagattgttccaaaactt 31985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 19225660 - 19225477
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||| |||  |||||||||||||| |||||||| ||||||||||| |||  ||||||| |||  |||| ||||||||||||||| |||    
T  19225660 ttcggattatataatctgaacggtatcagcacaaattctaaacatgtttgtaacatggatattcattttatggatgatataaatcttcctaactctcatc 19225561  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | |||||||||||| ||||   |||||||||||||||| | ||||||| ||| |||||||||||||||  ||||||||||    
T  19225560 cttctgttttgggtcattgttacccattcttagtcaaaaatcaggttttcggactatttgatcggattgctccgaaacttcccc 19225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 36946353 - 36946171
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||| ||||| ||||||||||||||| || || || ||||||||||| |||  ||||||| | |||||||||| |||||||||||| |||    
T  36946353 ttcggattatataacccgaactgtatcagcacaaattctgaatatgtttgtaacatgaataatcattttaag-acaatattaagcttcctaactctcatc 36946255  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| |||||||||||| ||| ||||| |||||||||| || | |||||||| |||||||||| ||||||   ||||||||||    
T  36946254 cttttgttttgggtcattgttagttgttattagtcaaaattctggttttcgggatacttgatcgaattgcttcgaaacttcccc 36946171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 43737237 - 43737350
Alignment:
Q  118 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 217  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||    
T  43737237 atagtcattttagggacaatattaatcttcctaactctgatccttatgttttgggtcattgttacatgttcttagttaaaaaccgggttttcgggctact 43737336  T
Q  218 tgatcggattgctc 231  Q
    ||||||||||||||    
T  43737337 tgatcggattgctc 43737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 24042252 - 24042148
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||||||||||||| ||||||||||||||| |    
T  24042252 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatatcaatcttcctaactctca 24042153  T
Q  158 tcctt 162  Q
    |||||    
T  24042152 tcctt 24042148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 7115282 - 7115151
Alignment:
Q  110 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 209  Q
    ||||||| ||| ||| |||| ||||||||||||||||  ||||||| |||||| |||||| ||||||| ||| ||||||||||||||||||||  |||||    
T  7115282 taacatggataaccaatttatggacaatattaatcttgataactctcatccttctatttttggtcattgttagttgttcttagtcaaaaatcgtgttttc 7115183  T
Q  210 gggctacttgatcggattgctctaaaacttcc 241  Q
    |||||||||||||| |||||||| ||||||||    
T  7115182 gggctacttgatcgtattgctctgaaacttcc 7115151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 57 - 200
Target Start/End: Original strand, 5278358 - 5278501
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||| ||| ||||| |||| ||||  | ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  5278358 tagttcggattatataatctgaactgtattagcataaattttgaacatgtttgtaacatggatagtcattttaaggataatattaatcttcctaactctt 5278457  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaat 200  Q
    |||||| | |||||||||||| |||   ||||||||||| ||||    
T  5278458 atccttctgttttgggtcattgttagccgttcttagtcacaaat 5278501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 184
Target Start/End: Complemental strand, 37518359 - 37518233
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||   |||| ||||||||| ||| ||||||||||||||||||| |    
T  37518359 agttcggattatataatccgaactgtatcagcataaattctaaacatgtttgtaacagagatagtcattttaggaacactattaatcttcctaactctca 37518260  T
Q  158 tccttttattttgggtcattcttactt 184  Q
    ||||| | |||| ||||||| ||||||    
T  37518259 tccttctgttttaggtcattgttactt 37518233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 6467198 - 6467020
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| | ||||| ||||| | |||||||| ||||||| ||| ||||  |||||| || |||||||||| |||||||||||  |||||     
T  6467198 gattatataatccgaactatatcaacacaagttctaaacatgtttgtaatatggatagttattttaagggcaatattaattttcctaactctcttccttc 6467099  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||| ||||||| |||  |||||||||| ||||||  | | ||| |||||||||||||||||| ||| ||| |||||    
T  6467098 tattttaggtcattgttagctgttcttagttaaaaatttggtattccggctacttgatcggattgttctgaaatttccc 6467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 26555128 - 26555040
Alignment:
Q  151 actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    ||||| |||||| |||||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||    
T  26555128 actctcatccttctattttgggtcattgttacatgttcttagtaaaaaaacgggttttcgggctacttgatcggattgctctgaaactt 26555040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 16983806 - 16983673
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| |||||||||||||||  |     | ||||||||||| ||| ||| ||||  |||||||||||||||||||||||| |    
T  16983806 agttcggattatataatctgaattgtatcagcacaaattttgggtctgtttgtaacatggataaccagtttacagacaatattaatcttcctaactctca 16983707  T
Q  158 tccttttattttgggtcattcttacttgttctta 191  Q
    ||||| |||||| ||||||| |||  ||||||||    
T  16983706 tccttctatttttggtcattattagctgttctta 16983673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 48776268 - 48776100
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 162  Q
    |||||||||||| || | ||| |||||||||  | ||||| ||| ||||||| ||||  |||||| ||| ||||||||||||||||||||| || | |      
T  48776268 attatataatccaaattatattagcacaaattttgaacatgtttataacatggatagtgattttaaggataatattaatcttcctaactctcatgcatag 48776169  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | ||||| |||||||  || ||||||||||||||||||  |||||||| ||||||| ||| ||||||||    
T  48776168 tcattttaggtcattgctagttgttcttagtcaaaaatttgattttcgagctacttaatcagattgctc 48776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 48775705 - 48775798
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 153  Q
    |||| ||||||||||||||||| |||||  ||||||||  |||||||  |||||||||| |||| || |||| |||||||||||||||||||||||    
T  48775705 agttaggattatataatccgaactgtat--gcacaaattttaaacatgcttgtaacatgaatagtcagtttaaggacaatattaatcttcctaact 48775798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 37398877 - 37398771
Alignment:
Q  136 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 235  Q
    |||||||||||||||||||| ||| || | |||| ||||||| ||| ||||||||||| ||||||  | ||||  |||||||||||| ||||||||  ||    
T  37398877 atattaatcttcctaactctcatcattctgttttaggtcattgttagttgttcttagtaaaaaattcggtttttaggctacttgatcagattgctccgaa 37398778  T
Q  236 acttccc 242  Q
    |||||||    
T  37398777 acttccc 37398771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 222
Target Start/End: Complemental strand, 48706061 - 48705899
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    ||||| |||||||||| ||| |||||||||||| || |||| | ||||| ||||| | ||| | | |||| | || |||||||||||||||||||  |||    
T  48706061 ttcggtttatataatctgaactgtatcagcacagattctaagcctatttttaacacggataactagtttaagtaccatattaatcttcctaactcggatc 48705962  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 222  Q
     || | |||| ||||||| ||  ||||||| ||| ||||||   |||||||||||||||||||    
T  48705961 tttatgttttaggtcattgtttattgttctcagtaaaaaattcaattttcgggctacttgatc 48705899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 43185887 - 43185996
Alignment:
Q  68 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 167  Q
    ||||||||| || |||||||||||||||  ||||||| ||| ||||||| |||  ||||||  ||||||||||||  ||||||||||| || ||| ||||    
T  43185887 atataatccaaactgtatcagcacaaattttaaacatgtttataacatggataatcattttttggacaatattaacattcctaactctcatacttatatt 43185986  T
Q  168 ttgggtcatt 177  Q
    || |||||||    
T  43185987 ttaggtcatt 43185996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 39581840 - 39582019
Alignment:
Q  64 gattatataatccgaagtgtatcagcaca--aatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    |||||||||||||||| ||||||||||||  |||  |||   | ||||||||||| ||| ||| ||||  |||  ||||||||||| ||||||| || ||    
T  39581840 gattatataatccgaactgtatcagcacacaaattataagtttgtttgtaacatgaataaccaatttaaagac--tattaatcttcataactctcattct 39581937  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | | |||| ||||||| ||| || ||||| |||||||||| | |||| |||||||||||||  ||||||  |||| ||||||    
T  39581938 tctgttttaggtcattgttagttattcttcgtcaaaaatccggtttttgggctacttgatcatattgcttaaaaaattcccc 39582019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 8214354 - 8214257
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 155  Q
    |||||||||||  |||| | || || |||| ||| ||| || ||||| |||| |||||| |||| |||| || |||||||||||||||||||||||||    
T  8214354 agttcggattacgtaattcaaactgcatcaacaccaattctgaacatgtttgcaacatggatagtcattctaaggacaatattaatcttcctaactct 8214257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 161
Target Start/End: Complemental strand, 8214523 - 8214462
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    ||||| ||||||||||  || | ||||||| ||||||||||||||||||||||||| |||||    
T  8214523 aacatgtttgtaacatcgattgtcattttaaggacaatattaatcttcctaactctcatcct 8214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 37518215 - 37518142
Alignment:
Q  170 gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||| |||| |||||||||| |||||| || |||| || ||| |||||||||||||||  ||||||||||    
T  37518215 gggtcattgttacctgttcttagttaaaaattgggtttttggactatttgatcggattgctccgaaacttcccc 37518142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 521
Target Start/End: Complemental strand, 21123110 - 21123071
Alignment:
Q  482 taagttcccttttctctttatctttgtgttcatctctctc 521  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  21123110 taagttcccttttctctttatctttgtgtttatttctctc 21123071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 6467793 - 6467839
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacat 104  Q
    |||||||||||||||||||||| |||||||||| ||||  |||||||    
T  6467793 agttcggattatataatccgaactgtatcagcataaattttaaacat 6467839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 47239622 - 47239570
Alignment:
Q  189 ttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||  ||||||||    
T  47239622 ttagtcaaaaatctgattttcggagtacttgatcagattgctccgaaacttcc 47239570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 31520004 - 31519771
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||| |||     
T  31520004 gattacataatccggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaatataa 31519908  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||| ||    
T  31519907 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcgtatccttttgtttttggtcattgttacttgttcttagtcaaaaatcgggtt 31519808  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31519807 ttcgggctacttgatcggattgctctgaaacttcccc 31519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 21004436 - 21004661
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||| ||||| ||| ||||||| |||||||||||       |||||||||||||||||||||     |||||| |||||||||||||||||    
T  21004436 gattacataatccgaaaactccctaaacaccattttttaaggtaaaa---tagttcggattatataatccg-----tatcagtacaaatcctaaacatat 21004527  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  21004528 ttgtaacatgtatagccattttagggacaatattaatcttcataactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgggtt 21004627  T
Q  207 ttcgggctacttgatcggattgctctaaaacttc 240  Q
    ||| |||||||||||| ||||||||| |||||||    
T  21004628 ttccggctacttgatcagattgctctgaaacttc 21004661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 8 - 227
Target Start/End: Complemental strand, 42281003 - 42280786
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| |||||||||||||||  ||||||| |    
T  42281003 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattttaaacatgt 42280907  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||||||    
T  42280906 ttgtaacatgcatagtcattttagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcggatt 42280807  T
Q  207 ttcgggctacttgatcggatt 227  Q
    || || |||||||||||||||    
T  42280806 tttggactacttgatcggatt 42280786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 8885517 - 8885344
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  8885517 agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 8885418  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||||||| ||| |||| |||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  8885417 tccttctgttttgggttattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctc 8885344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 27928005 - 27927820
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||| |    
T  27928005 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctca 27927906  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||| |||||||||| |||||| || ||||||| |||||||||| ||||||||  ||||||||||    
T  27927905 tccttctgttttgggtcattgttacctgttcttagttaaaaattgggttttcggactacttgatcagattgctccgaaacttcccc 27927820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 44106270 - 44106503
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| |    
T  44106270 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgt 44106366  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||  | ||||||||||||||||||||||||| |||||| | ||||| |||||| |||| |||||||||||||||||||| ||    
T  44106367 ttgtaacatggatagtcattccatggacaatattaatcttcctaactctcatccttctgttttgagtcattgttacctgttcttagtcaaaaatcgggtt 44106466  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||| ||||||||||| ||||||||| ||||||||||    
T  44106467 ttcgtgctacttgatctgattgctctgaaacttcccc 44106503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 57 - 241
Target Start/End: Original strand, 9073598 - 9073782
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||     
T  9073598 tagttcggattatataacccgaactgtattagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaagtctc 9073697  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    |||||| | |||||||||||| |||| |||||||||||||||||||| |||| || ||||||||| |||||||||  ||||||||    
T  9073698 atccttatgttttgggtcattgttacctgttcttagtcaaaaatcgggtttttggactacttgattggattgctccgaaacttcc 9073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 3094780 - 3094953
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| |||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |    
T  3094780 agttccgattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctca 3094879  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||||||||||| |||| |||||||||||||||||||  ||||||| |||||||||||||||||||    
T  3094880 tccttctgttttgggtcattgttacatgttcttagtcaaaaatcgagttttcggactacttgatcggattgctc 3094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 34853427 - 34853608
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    ||||||||||||||| || ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  34853427 cggattatataatccaaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcct 34853526  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | | |||||||||||| |||| ||||||||| || ||||||  |||||||  ||||||||||||||||||  ||||||||||    
T  34853527 tctgttttgggtcattgttacctgttcttaggcagaaatcgagttttcggattacttgatcggattgctccgaaacttcccc 34853608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 36165902 - 36165716
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| ||||  ||||||| |||||||||||||||| ||||||| |    
T  36165902 agttcggattatataatccgaactgtatcagcacaaattgtaaacatgtttgtaacatggatagttattttagagacaatattaatcttcttaactctca 36165803  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||| |||||||||| ||||| | || |||| ||||||||||||||||||||||  ||||||||||    
T  36165802 tccttctgttttgggtcattgttacatgttcttagttaaaaaccgggttttttgggctacttgatcggattgctccgaaacttcccc 36165716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 11698380 - 11698195
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| |||| |||||||||| |||| |||| ||| ||| ||||||| |||| ||||||||||| ||||||||||||||||||||| |    
T  11698380 agttcggattatataattcgaactgtatcagcagaaattctaagcatgtttttaacatggatagtcattttagggataatattaatcttcctaactctca 11698281  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||   |||| ||||||| |||  |||||||||||||||||||| ||||||||||||||||||||| |||||  ||||||||||    
T  11698280 tccttccgtttttggtcattgttatctgttcttagtcaaaaatcgggttttcgggctacttgatcggaatgctccgaaacttcccc 11698195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 14164121 - 14163948
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||||||| |    
T  14164121 agttcggattatataatctgaaatgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcctaactctca 14164022  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||| ||||||| |||| ||||||||||||||||  |  |||||||| ||||||||||| ||||||    
T  14164021 tccttctgtttttggtcattgttacctgttcttagtcaaaaactgcgttttcggggtacttgatcggtttgctc 14163948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 17119943 - 17119758
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||| || ||||||||||| || | ||||||| ||||||||||||||||||||||||| |    
T  17119943 agttcggattatataatctgaattgtatcagcacaaattctaaatatgtttgtaacatggattgtcattttacggacaatattaatcttcctaactctca 17119844  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||| ||||| |||| |||||||||||||||| ||| ||||||| ||||||||| ||||| |||  ||||||||||    
T  17119843 tccttctgttttggatcattgttacctgttcttagtcaaaaaccgggttttcggactacttgattggatttctccgaaacttcccc 17119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 40392631 - 40392815
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| | | ||||||||||||||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  40392631 agttcggattatataatctgtactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctta 40392730  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    || || |  ||||||||||| ||| |||||||||||||||||||   |||||  |||||||||||||||| |||  |||||||||    
T  40392731 tctttatgatttgggtcattgttagttgttcttagtcaaaaatcaagttttcaagctacttgatcggatttctccgaaacttccc 40392815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 28916876 - 28917055
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||| ||||| |||| |||||||||||||||||||||||| |||||||| ||||||     
T  28916876 gattatataatccgaactgtatcagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatctttctaactctcatccttc 28916975  T
Q  164 tattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | |||||||||||| |||| ||||||| ||  ||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  28916976 tgttttgggtcattgttacatgttcttggtaaaaaaatcgggttttc-gactacttgatcggattgctccgaaacttcccc 28917055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 81 - 242
Target Start/End: Original strand, 40328015 - 40328176
Alignment:
Q  81 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 180  Q
    |||||||||| |||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||||| ||| || | |||||||| ||| ||    
T  40328015 tgtatcagcataaatactaaacatgtttgtaacatggattgtcattttatggataatattaatcttcctaactctcatctttctgttttgggttattgtt 40328114  T
Q  181 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    || |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  40328115 acctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctccaaaacttccc 40328176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 83 - 241
Target Start/End: Original strand, 36980689 - 36980847
Alignment:
Q  83 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 182  Q
    |||||||||||||  | ||||| ||||||||||| |||  ||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||| |||     
T  36980689 tatcagcacaaattatgaacatgtttgtaacatggataatcattttaaggacaatattgatctttctaactcttatccttctattttgggtcattgttag 36980788  T
Q  183 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
     | |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  36980789 ctattcttagtcaaaaatccgattttcgggctacttgatcggattgctccgaaacttcc 36980847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 66 - 230
Target Start/End: Original strand, 1076659 - 1076822
Alignment:
Q  66 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 165  Q
    |||||||||||||| ||||| |||||||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| ||| ||||     
T  1076659 ttatataatccgaattgtat-agcacaaattttaaacatgtttgtaacatgaatatccattttatggacaatattaatcttcatagctctcatcattttg 1076757  T
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 230  Q
    |||||  ||||| ||| |||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  1076758 ttttgcatcattgttagttgttcttggtcaaaaatctgattttcgggctacttgattggattgct 1076822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 60 - 231
Target Start/End: Complemental strand, 4259697 - 4259528
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||| ||| ||||||||||||||| |||| ||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | |||    
T  4259697 ttcggattatataatctgaactgtatcagcacaaattctaagcatgtttgtaacattgatagtcattttatggacaatattaatcttcctaactatcatc 4259598  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |  || |||| | ||||| ||| |||||||||||||||| || | ||||||||||||| |||||| ||||||    
T  4259597 c--ttcttttcgatcattgttagttgttcttagtcaaaactctggttttcgggctactagatcggcttgctc 4259528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 36317887 - 36318072
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacat----atttgtaacatgtatagccattttagggacaatattaatcttcctaact 153  Q
    |||||||||||||||||| ||| ||||| |||||||||  | |||||    |||||||||||| |||  ||||||| |||||||||||||||| ||||||    
T  36317887 agttcggattatataatctgaactgtattagcacaaattgtgaacatgttaatttgtaacatggataatcattttaaggacaatattaatctttctaact 36317986  T
Q  154 cttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |||||| ||  ||||||||||||| |||  |||||||||||| ||||  |||||||||||||||||||||||| | || |||||||    
T  36317987 cttatctttcaattttgggtcattgttagctgttcttagtcagaaattcgattttcgggctacttgatcggatagttccaaaactt 36318072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 40994887 - 40994983
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 154  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  40994887 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactc 40994983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 65 - 227
Target Start/End: Original strand, 28423523 - 28423684
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||| ||| || ||||  |||||| |||||||| ||||||||||| ||   |||||||  |||||||||||||||||||||||| |||||| |    
T  28423523 attatataatctgaactgcatcactacaaattctaaacatgtttgtaacatggatgaacattttacagacaatattaatcttcctaactctcatccttct 28423622  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
    |||||| ||||||  || ||||||||||||||||||  | |||||||||||||||||||||||    
T  28423623 attttgcgtcatt-gtagttgttcttagtcaaaaattagtttttcgggctacttgatcggatt 28423684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 155
Target Start/End: Original strand, 37248605 - 37248750
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        |||| | ||||||||||||||| ||||||||||||||| |||||||| |    
T  37248605 gattacataatccagaaaccccctaaacaccatttttcaaggtaaaac---agtttgaattatataatccgaattgtatcagcacaaattctaaacatgt 37248701  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactct 155  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||||||    
T  37248702 ttgttacatggatagtcattttagggacaatattaatcttcctaactct 37248750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 6395186 - 6395364
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    |||||||||||  || ||||||||||| ||| |  ||| | |||||| |||| |||  ||||||| |||||||||||| |||||||||||| || ||| |    
T  6395186 attatataatcttaattgtatcagcaccaattccgaacttttttgtagcatggatattcattttatggacaatattaaacttcctaactctcattcttct 6395285  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
     |||| ||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||| ||| |||| |||||    
T  6395286 gttttaggtcattgttagctgttcgtagtcaaaaatctgattttcgggctacttgatcggattgttctgaaacatcccc 6395364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 65 - 155
Target Start/End: Original strand, 16310701 - 16310791
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 155  Q
    ||||||||||||||| | ||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  16310701 attatataatccgaactatatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactct 16310791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 8621697 - 8621528
Alignment:
Q  63 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||||||| ||||| |||||||||||||||  | ||  | || |||||||| |||  ||||||| ||| |||||||||||| |||||||||||   |    
T  8621697 ggattatataacccgaactgtatcagcacaaatt-tgaatttgttcgtaacatggataatcattttaaggataatattaatctttctaactcttatggat 8621599  T
Q  163 --ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
      | ||||| ||||||| ||| |||||||||||||||||||  ||||| | ||||||||||||||||||||    
T  8621598 aatcattttaggtcattgttagttgttcttagtcaaaaatccaatttttgagctacttgatcggattgctc 8621528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 34645520 - 34645645
Alignment:
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    ||||||||||  |||| ||||||| ||| ||| ||||| || |||||||| |||||| | |||||| ||||| |||| |||||||||||||| ||| | |    
T  34645520 tttgtaacatagatagtcattttaaggataattttaatttttctaactctcatccttctgttttggatcattgttacatgttcttagtcaaacatccggt 34645619  T
Q  206 tttcgggctacttgatcggattgctc 231  Q
    |||||||||||||||||  |||||||    
T  34645620 tttcgggctacttgatcacattgctc 34645645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 215
Target Start/End: Original strand, 39093602 - 39093760
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||| ||| ||||||| || ||||  ||| ||| ||||||||||  ||| ||| ||||  ||| ||||||||||| | || |||     
T  39093602 tagttcggattatataatctgaaatgtatcaacataaattataagcatgtttgtaacatacataaccagtttaatgaccatattaatctttcaaagtctc 39093701  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggcta 215  Q
    ||| || | |||| ||||||| ||| ||||||||||| ||||||  |||||||||||||    
T  39093702 atctttatgttttaggtcattgttaattgttcttagtaaaaaatatgattttcgggcta 39093760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 7982478 - 7982570
Alignment:
Q  63 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 155  Q
    ||||||||||||| ||| |||||| ||||||||  | ||||| ||||||||||  |||| ||||||| |||||||||||||||||| ||||||    
T  7982478 ggattatataatctgaactgtatcggcacaaattttgaacatgtttgtaacataaatagtcattttaaggacaatattaatcttcccaactct 7982570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 31234554 - 31234486
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 154  Q
    |||||| ||| || ||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  31234554 cagcaccaattctgaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaactc 31234486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 33472166 - 33472270
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| |||| ||||||| || || |  ||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |    
T  33472166 agttcgaattacataatccaaactgcacaagcaccaattcttaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctca 33472265  T
Q  158 tcctt 162  Q
    |||||    
T  33472266 tcctt 33472270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 33472373 - 33472477
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| ||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  33472373 agttcagattacataatccaaactgcatcatcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactatca 33472472  T
Q  158 tcctt 162  Q
    |||||    
T  33472473 tcctt 33472477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 10833551 - 10833468
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 169  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |||||||| ||||    
T  10833551 cagcaccaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactttcatccttttgtttt 10833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 9845323 - 9845392
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 169  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||||||||||||||||  ||||| ||||||    
T  9845323 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttcctaactctcgtccttatatttt 9845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 7981618 - 7981781
Alignment:
Q  67 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 166  Q
    |||| |||| ||| |||| || |||||||  | ||||| ||||||||||| |||   |||||| ||||||| ||||  |||||||| || |||||| | |    
T  7981618 tatagaatctgaactgtaccaacacaaattttgaacatgtttgtaacatggatatttattttaaggacaatgttaagtttcctaaccctcatccttctgt 7981717  T
Q  167 tttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 230  Q
    ||||||| ||| ||| ||||| ||| | ||||||   |||||| ||||||||||||||||||||    
T  7981718 tttgggttattgttagttgttattaattaaaaatgcaattttcaggctacttgatcggattgct 7981781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 10840817 - 10840717
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    ||||||||||| | |||| ||||| ||||||||| || |   | ||||||||||| ||| ||| | || ||||||||||||||||||||||||| |||||    
T  10840817 cggattatatatttcgaattgtattagcacaaattctgagtttttttgtaacatggataaccagtgtaaggacaatattaatcttcctaactctcatcct 10840718  T
Q  162 t 162  Q
    |    
T  10840717 t 10840717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 9845488 - 9845573
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaat 143  Q
    ||||||||||| ||||||| || ||  ||||||| ||| |||||||| ||||||||||| |||  ||||||| || ||||||||||    
T  9845488 agttcggattacataatccaaactgcgtcagcaccaattctaaacatgtttgtaacatggatactcattttaagggcaatattaat 9845573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 24627717 - 24627761
Alignment:
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  24627717 tttgtaacatggatagtcattttaaggacaatattaatcttccta 24627761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 41530812 - 41530862
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    ||||| ||||||||||| |||| ||||| | ||||||||||||||||||||    
T  41530812 aacatgtttgtaacatggatagtcatttcaaggacaatattaatcttccta 41530862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 5e-82; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 18583656 - 18583423
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||| |||||||||||       ||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  18583656 gattacataatccggaaaccccctaaacacctttttttaaggtaaaa---tagttcggattatataatctgaactgtatcggcacaaatcctaaacatat 18583560  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  18583559 ttgtaacatgtatagccattttagggacaatattaatctgcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggtt 18583460  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18583459 ttcgggctacttgatcggattgctctgaaacttcccc 18583423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 33611522 - 33611289
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||   |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33611522 gattacataatctggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 33611426  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||| |||| |||||||||||||||||||| ||    
T  33611425 ttgtaacatgtatagccattttaaggacaatatttatcttcctaaatcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggtt 33611326  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33611325 ttcgggctacttgatcggattgctctgaaacttcccc 33611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 23442832 - 23443018
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  23442832 tagttcggattatataatccaaactgtatcagcacaaatcctaaacatatttgtaacatgtacagccattttagggacaatattaatcttcctaactctt 23442931  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||| |||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  23442932 atccttttgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggattgctctgaaacttcccc 23443018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 49786316 - 49786548
Alignment:
Q  8 gattacataatccaaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 107  Q
    |||||||||||||  ||||||||||||||||||||||||| |       |||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  49786316 gattacataatccggaaacccccaaacacccttttttaagataaaa---tagttcggattatataatcctaactgtatcagcacaaatcctaaacttatt 49786412  T
Q  108 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 207  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | |||| |||| |||||||||||||   |||    
T  49786413 tgtaacatgtatagccattttatggacaatattaatcttcctaactcttatccttttgttttgggtcaatgttacatgtttttagtcaaaaatcaagttt 49786512  T
Q  208 tcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||| |||||||||||||||||||| ||||||||||    
T  49786513 tcggcctacttgatcggattgctctgaaacttcccc 49786548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 34162833 - 34162600
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||| ||||||||||||||| ||||||||||||||| |||||||| |    
T  34162833 gattacataatccggaaaccccctaaacaccctttttcaaggtaaac----agttcgaattatataatccgaactgtatcagcacaaattctaaacatgt 34162738  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    |||||||||||| |||| ||||||||||||||||||| ||    
T  34162737 ttgtaacatggatagccattttagggacaatattaatcttcctaactcctatccttccgtttttgggtcattgttacatgttcttagtcaaaaatcgaat 34162638  T
Q  206 tttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||| || ||||||  ||||||||||    
T  34162637 tttcgggctacttgattggtttgctccgaaacttcccc 34162600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 45046915 - 45046741
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||||||     
T  45046915 tagttcggattgtataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcatttcagggacaatattaatcttcctaactctc 45046816  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||| | |||||||||||| |||| |||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  45046815 atccttctgttttgggtcattgttacctgttcttagttaaaaaccgggttttcgggctacttgatcggattgctc 45046741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 72 - 231
Target Start/End: Complemental strand, 41584715 - 41584556
Alignment:
Q  72 aatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgg 171  Q
    |||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | ||||||    
T  41584715 aatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgg 41584616  T
Q  172 gtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  41584615 gtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctc 41584556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 52744905 - 52744722
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    ||||||||| |||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||| |||| |||||||||||||||||| |||    
T  52744905 ttcggattaaataatctgaactgtatcagcacaaatgctaaacatgtttgtaacatggatagtcattttaggaacaacattaatcttcctaactctcatc 52744806  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | |||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||  ||||||||||    
T  52744805 cttctgttttgggtcattgttacttgttcttagtcaaaaattgggttttcggactacttgatcggattgctccgaaacttcccc 52744722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 49677530 - 49677763
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||| |||||||| |||||||| |||| |||||        |||||||||||||||||||||| |||||||||| |||| |||| ||| |    
T  49677530 gattacataatccagaaaccccctaaacaccccttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcataaattctaaccatgt 49677626  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||| || ||| | |||||||||||| |||| |||||||||| ||||||||| ||    
T  49677627 ttgtaacatagatagtcattttagggacaatattaatcttcctaactctcattcttatgttttgggtcattgttacatgttcttagttaaaaatcgggtt 49677726  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | |||||||||||||||||||  ||||||||||    
T  49677727 ttcagcctacttgatcggattgctccgaaacttcccc 49677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 57 - 231
Target Start/End: Original strand, 7011304 - 7011478
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||||||| |||||||||| |||| |||||||| ||| ||||||| |||| ||||||||||||||||||||||||| |||||||     
T  7011304 tagttcggattatataatccgaactgtatcagcaaaaattctaaacatgtttctaacatggatagtcattttagggacaatattaatcttcttaactctc 7011403  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||| | |||| ||||||| | || |||| ||||||||||||||| |||||||||||||||||||||||||||    
T  7011404 atccttctgttttaggtcattgtaacctgtttttagtcaaaaatcgggttttcgggctacttgatcggattgctc 7011478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 15069905 - 15069732
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||||| | |    
T  15069905 agttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttactaactttca 15069806  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  15069805 tccttctgttttggatcattgttacttgttcttagttaaaaatcggattttcgagctacttgatcggattgctc 15069732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 65 - 243
Target Start/End: Original strand, 17000480 - 17000659
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-t 163  Q
    ||||||||||| ||  ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||      
T  17000480 attatataatctgagctgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttcc 17000579  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
      |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||    
T  17000580 gtttttgggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttcccc 17000659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 243
Target Start/End: Complemental strand, 45567940 - 45567769
Alignment:
Q  72 aatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgg 171  Q
    |||||||| ||||||||||||||| |||||||| ||||||| ||| |||| |||||||||||||||||||||||| |||||||| |||| ||| ||||||    
T  45567940 aatccgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatctttctaactctcatccatttgttttgg 45567841  T
Q  172 gtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||| |||| |||||||||| ||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  45567840 gtcattgttacctgttcttagtaaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 45567769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 28866694 - 28866509
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| |||||||||||| ||||| | ||||||||| ||||||| |    
T  28866694 agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagccattttatggacatttttaatcttcataactctca 28866595  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | ||||||| |||| |||| ||||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||    
T  28866594 tccttctgttttgggacattgttacctgttcttagtcaaaaatcggtatttcggactacttgatcggattgctccgaaacttcccc 28866509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 42546062 - 42546248
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||| || |||||||||| | |||||||| |    
T  42546062 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagagataatattaatcattctaactctca 42546161  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatc-ggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||  |||||||||| ||||| | || |||||||||||||||||||||||||||  ||||||||||    
T  42546162 tccttctgttttgggtcattgttatctgttcttagttaaaaaccgggtttttcgggctacttgatcggattgctccgaaacttcccc 42546248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 40650739 - 40650556
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||| ||| ||| |||||||||||||||  ||| ||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |    
T  40650739 agttcggattatatgatctgaactgtatcagcacaaattataaccatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctca 40650640  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||| |  ||||||||||| |||| |||||||||| ||||| ||  |||||||||||||||||||||||||||  ||||||||    
T  40650639 tccttctcgtttgggtcattgttacctgttcttagttaaaaaccgagttttcgggctacttgatcggattgctccgaaacttcc 40650556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 34006355 - 34006541
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactctt 156  Q
    ||||| ||||||||||||| || ||||| |||||||||  |||| || ||||||||||| |||| ||||||||||| ||||||||||||||||||||||     
T  34006355 agttcagattatataatccaaattgtattagcacaaattttaaagatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctc 34006454  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||| ||||||| ||||||  ||| |||||||||||||||||  | |||||||||||||||||||||||||||  ||||||||||    
T  34006455 atccttctattttgtgtcattgctacctgttcttagtcaaaaattaggttttcgggctacttgatcggattgctccgaaacttcccc 34006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 176
Target Start/End: Complemental strand, 32817723 - 32817557
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||||||||||||| |    
T  32817723 gattacataatccgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaatcctaaacatgt 32817627  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcat 176  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  32817626 ttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttctgttttgggtcat 32817557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 40908046 - 40907813
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 105  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||        ||||||||||||||| || ||| ||||||||||||||| ||||||||     
T  40908046 gattacataatccgaaaaccccctaaacaccctttttttaaggtaaaac---agttcggattatata-tctgaactgtatcagcacaaattctaaacatg 40907951  T
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    ||||||||||| |||  |||||||| |||||||||||||||||||||||  ||| || |  ||||||||||| |||| |||| ||||| ||||||||| |    
T  40907950 tttgtaacatggataatcattttagagacaatattaatcttcctaactcccatctttctgctttgggtcattgttacctgttgttagtaaaaaatcgggt 40907851  T
Q  206 tttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||| |||||||||||||||||||  ||||||||||    
T  40907850 tttcggactacttgatcggattgctccgaaacttcccc 40907813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 26723551 - 26723367
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactctta 157  Q
    ||||||||||||||||||||| | |||||||||||||   |||||| ||||||||||| |||| ||||||||||| |||||||||||||||| ||||| |    
T  26723551 gttcggattatataatccgaactatatcagcacaaatttaaaacatgtttgtaacatg-atagtcattttagggaacaatattaatcttccttactctga 26723453  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || || ||||||| |||||| |||  |||||||||| ||||||||| |||| || |||||||||||||||||||  ||||||||||    
T  26723452 tcattctattttgagtcattgttatctgttcttagtaaaaaatcgggtttttggactacttgatcggattgctccgaaacttcccc 26723367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 57 - 241
Target Start/End: Original strand, 27794925 - 27795108
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||| ||||||||||| ||| ||||||||| |||||  ||||||| ||| ||||||  |||| ||||||| ||||||||||||||||||||||| |     
T  27794925 tagttcgaattatataatctgaactgtatcagcgcaaattttaaacatgtttataacatagatagtcattttatggacaatattaatcttcctaactatc 27795024  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    || ||| | |||||||||||| |||| |||||||||||||| ||||| |||| ||||||||||||||||||||||  ||||||||    
T  27795025 at-cttctgttttgggtcattgttacctgttcttagtcaaacatcgggtttttgggctacttgatcggattgctccgaaacttcc 27795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 57 - 198
Target Start/End: Complemental strand, 44573161 - 44573021
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||| ||| ||||| |||||||||  ||||||| ||||||||||| |||| |||||||||||||||||||||||| ||||||||     
T  44573161 tagttcggattatataatctgaactgtat-agcacaaattataaacatgtttgtaacatgaatagtcattttagggacaatattaatctttctaactctc 44573063  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaa 198  Q
    |||||| | |||||| ||||| ||||||||||||||||||||    
T  44573062 atccttctgttttggatcattgttacttgttcttagtcaaaa 44573021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 24472889 - 24472706
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||||||| | ||| |||||||||  ||||||| ||||||||||| |||| ||||||| ||| |||||||| |||||||||| | ||     
T  24472889 ttcggattatataatccgaactatattagcacaaattttaaacatgtttgtaacatggatagtcattttaaggaaaatattaagcttcctaactatcatt 24472790  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | |||| ||||||| |||  ||||||||||||||||||| ||||  |||| ||||||| |||||||||  ||||||||||    
T  24472789 cttctgtttttggtcattgttagctgttcttagtcaaaaatcgaatttgtgggcaacttgattggattgctccgaaacttcccc 24472706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 59 - 231
Target Start/End: Complemental strand, 3561398 - 3561226
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 158  Q
    ||||| ||||||||||||||| |||||||||||||||  | ||||| ||||||||||  ||||  |||||| ||||| |||||||||| |||||||| ||    
T  3561398 gttcgaattatataatccgaactgtatcagcacaaattatgaacatgtttgtaacatagatagtaattttaaggacagtattaatctttctaactctcat 3561299  T
Q  159 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | || | |||| ||||||| ||| ||||||||||||||||||| ||| || ||| ||||||||| ||||||||    
T  3561298 cattctgttttaggtcattgttagttgttcttagtcaaaaatccgatctttgggttacttgatcagattgctc 3561226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 123 - 231
Target Start/End: Original strand, 38885373 - 38885481
Alignment:
Q  123 cattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 222  Q
    ||||||| ||||||||||||| ||||||||||| |||||| | |||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||    
T  38885373 cattttaaggacaatattaattttcctaactctcatccttctgttttgggtcattgttacttgttcttagttaaaaattgggttttcgggctacttgatc 38885472  T
Q  223 ggattgctc 231  Q
    |||||||||    
T  38885473 ggattgctc 38885481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 42928980 - 42929152
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 158  Q
    ||||||||||||||||||| | |||||||| ||||||| | | ||| ||| |||||||||| ||||||||| |||| |||||||| ||| ||||||| ||    
T  42928980 gttcggattatataatccggactgtatcagtacaaatcatgagcatgtttataacatgtattgccattttaaggaccatattaattttcttaactctcat 42929079  T
Q  159 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     ||| | |||| | ||||| ||| ||||||| ||||||||||| | |||||| ||||||||||| ||||||||    
T  42929080 tcttatgttttagatcattgttagttgttctcagtcaaaaatctggttttcgagctacttgatcagattgctc 42929152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 100 - 242
Target Start/End: Complemental strand, 25563436 - 25563294
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 199  Q
    ||||| ||||||| ||| |||| ||||||| |||||||||||| |||| |||| || |||||||| |||| ||||||| ||| ||||| |||||||||||    
T  25563436 aacatgtttgtaatatggatagtcattttaaggacaatattaagcttcataaccctcatccttttgttttaggtcattgttagttgttattagtcaaaaa 25563337  T
Q  200 tcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    || ||| |||| ||||||||||||||||||||  |||||||||    
T  25563336 tccgatattcgagctacttgatcggattgctccgaaacttccc 25563294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 32542436 - 32542563
Alignment:
Q  1 gtttaccgattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatccta 99  Q
    |||||| |||||||||||||| |||||||| |||||||||||   |||||       ||||||||||||||||||||||| |||||||||||||||||||    
T  32542436 gtttacggattacataatccagaaaccccctaaacacccttt---aaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatccta 32542529  T
Q  100 aacatatttgtaacatgtatagccattttaggga 133  Q
    |||||||||||||||||||||| |||| ||||||    
T  32542530 aacatatttgtaacatgtatagtcattctaggga 32542563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 6223779 - 6223634
Alignment:
Q  89 cacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttc 188  Q
    |||||||  |||| || ||||||||||| |||| |||||||||||||||| |     |||||||| | || ||| | |||| ||||||| |||| |||||    
T  6223779 cacaaattttaaatatgtttgtaacatggatagtcattttagggacaataat-----tcctaactatcattcttctgttttaggtcattgttacatgttc 6223685  T
Q  189 ttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  6223684 ttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaactt 6223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 58 - 153
Target Start/End: Original strand, 890609 - 890704
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 153  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||   | ||||||||||| ||| ||| |||| ||||||||||||||||| |||||    
T  890609 agttcggattatattatccgaaatgtatcagcacaaattctaagtctgtttgtaacatggataaccagtttaaggacaatattaatcttcataact 890704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 9446159 - 9446048
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||  |||||||||  ||| |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||||||| || || | |    
T  9446159 agttcggattacgtaatccgaacagtaccagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatcttcttagctttca 9446060  T
Q  158 tccttttatttt 169  Q
    ||||| ||||||    
T  9446059 tccttgtatttt 9446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 9445922 - 9445846
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    |||||| ||| |||||||| |||||| |||| |||| ||||||| ||| ||| ||||||||||||||||| ||||||    
T  9445922 cagcaccaattctaaacatctttgtagcatggatagtcattttaaggagaatgttaatcttcctaactctcatcctt 9445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 38885324 - 38885368
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacat 104  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||    
T  38885324 ttcggattatataatccgaactgtatcagcacaaattctaaacat 38885368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 26230145 - 26230256
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||| |||||||||||| ||||| ||||||| ||||| | |||| | |  |||||||||| ||||||| |||| |||  |||||||||||| || ||||     
T  26230145 tagtgcggattatataacccgaactgtatcaacacaagttctaatcttgcttgtaacatggatagccaatttaaggatcatattaatcttcatagctctc 26230244  T
Q  157 atccttttattt 168  Q
    |||||| |||||    
T  26230245 atccttctattt 26230256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 890748 - 890801
Alignment:
Q  186 ttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |||||||||||||||| | |||||||| ||||||||| |||||||| |||||||    
T  890748 ttcttagtcaaaaatctggttttcgggttacttgatcagattgctccaaaactt 890801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 162
Target Start/End: Complemental strand, 43319016 - 43318940
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    |||||| ||| || ||||| ||||||||||  |||| ||||||| | ||||||||||||||||||||| | ||||||    
T  43319016 cagcaccaattctgaacatgtttgtaacattgatagtcattttaagaacaatattaatcttcctaactttcatcctt 43318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 800615 - 800552
Alignment:
Q  99 aaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    |||||| |||||| |||| |||| ||||||  ||||||||||||| ||||||||||| ||||||    
T  800615 aaacatgtttgtagcatggatagtcatttttaggacaatattaattttcctaactctcatcctt 800552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 45880095 - 45880000
Alignment:
Q  136 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||||||||||||||| | |||||| | |||| ||||||| ||| || || |||||||||||||   |||| ||| |||||||||  |||||||    
T  45880095 atattaatcttcctaactttcatccttctgttttaggtcattgttagttttttttagtcaaaaatctagtttttgggatacttgatcaaattgctc 45880000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 8704583 - 8704487
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 153  Q
    |||||| |||||||||||||||| ||||||| ||| | | || |||||  || || |||| |||| ||||||| |||   |||||||||||||||||    
T  8704583 tagttcagattatataatccgaactgtatcaccaccagttctgaacatgattatatcatggatagtcattttaaggatcttattaatcttcctaact 8704487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 14913000 - 14912968
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcaca 92  Q
    ||||||||||| |||||||||||||||||||||    
T  14913000 ttcggattatacaatccgaagtgtatcagcaca 14912968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 1e-79; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 43473081 - 43472848
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||| |||||||||||       ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  43473081 gattacataatccggaaaccccctaaacaccattttttaaggtaaaa---tagttcgaattatataatccgaactgtatcagcacaaatcctaaacatat 43472985  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||| ||    
T  43472984 ttgtaacatgtatagccattttaaggacaatattaatcttcctaactcttatccttttgttttgggtcattgttatctgttcttagtcaaaaatcgggtt 43472885  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  43472884 ttcgggctacttgatcggattactctgaaacttcccc 43472848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 2358732 - 2358501
Alignment:
Q  10 ttacataatccaaaaaccc-ccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatattt 108  Q
    |||||||||||  |||||| |||||||||||||||||||||       ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  2358732 ttacataatccggaaaccctccaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcataaatcctaaacatattt 2358636  T
Q  109 gtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatttt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || | | |||||||||||||||||| ||||    
T  2358635 gtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttgggtcattgttgcatattcttagtcaaaaatcgggtttt 2358536  T
Q  209 cgggctacttgatcggattgctctaaaacttcccc 243  Q
     |||||||||||||| |||||||| ||||||||||    
T  2358535 tgggctacttgatcgaattgctctgaaacttcccc 2358501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 52777326 - 52777511
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52777326 agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaacatgtatagccattttagggacaatattaatcttcttaactctta 52777425  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||| ||||||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  52777426 tccttttgttttgggtcattgctacatgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctctgaaacttcccc 52777511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 47302066 - 47302294
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 105  Q
    ||||||||||||| |||||| || |||||||||||||| |||||       ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47302066 gattacataatccgaaaacctcctaaacaccctttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacata 47302162  T
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||| |||| |||||||||||||||||||  |    
T  47302163 tttgtaacatgtatagccatttta-ggacaatattaatatt-ctaactcttatccttttgttttgggtcattgttacatgttcttagtcaaaaatcgagt 47302260  T
Q  206 tttcgggctacttgatcggattgctctaaaactt 239  Q
    ||||||||||||||||||||||| ||| ||||||    
T  47302261 tttcgggctacttgatcggattgttctgaaactt 47302294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 50716349 - 50716533
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  50716349 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatc 50716448  T
Q  160 ctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
     ||    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  50716449 attccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 50716533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 50796498 - 50796314
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  50796498 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttagggacaatattaatcttcctaactctcatc 50796399  T
Q  160 ctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
     ||    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  50796398 attccgtttttgggtcattgttacttgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 50796314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 28873050 - 28873286
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacaccctttttt--aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacat 104  Q
    ||||||||||||||| ||||||| ||||||||||||||  |||||        |||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  28873050 gattacataatccaacaaccccctaaacacccttttttttaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacat 28873146  T
Q  105 atttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcgg 203  Q
     ||||||||||  |||| ||||||||||||||||||||||||| ||||||| || |||    |||||||||| | |||||||||||||||||||||||||    
T  28873147 gtttgtaacatagatagtcattttagggacaatattaatcttcttaactctcattcttccgcttttgggtcactgttacttgttcttagtcaaaaatcgg 28873246  T
Q  204 attttcgggctacttgatcggattgctctaaaacttcccc 243  Q
     |||||||||||||||||||||||||||  ||||||||||    
T  28873247 gttttcgggctacttgatcggattgctccgaaacttcccc 28873286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 3352130 - 3351946
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| ||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  3352130 agttcgaattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 3352031  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    | ||| | |||||||||||| ||||  ||||||||| |||||| || ||||| |||||||||||||||||||||  |||||||||    
T  3352030 ttcttctgttttgggtcattgttaccggttcttagtaaaaaatagggttttcaggctacttgatcggattgctccgaaacttccc 3351946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 38977860 - 38977627
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||| ||||||||| ||||||| ||||| |||||        |||||  ||||||||||||||| |||||||||||||||  ||||||| |    
T  38977860 gattacataatccgaaaaccccctaaacaccttttttcaaggtaaaac---agttcaaattatataatccgaactgtatcagcacaaattataaacatgt 38977764  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| ||| |||||| ||||| ||  ||    
T  38977763 ttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgtccttagttaaaaaccgagtt 38977664  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||| |||||||||||||||||||| |||||||||||    
T  38977663 ttcgagctacttgatcggattgctccaaaacttcccc 38977627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 57 - 243
Target Start/End: Complemental strand, 34821408 - 34821222
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||| ||||||||||||||||||||| | |     
T  34821408 tagttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcattttatggacaatattaatcttcctaaatttc 34821309  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||| | |||||||||||| |||| |||||||||| ||||| ||| ||||| |||||||||||||||| ||||| ||||||||||    
T  34821308 atccttctgttttgggtcattgttacctgttcttagttaaaaagcgggttttcaggctacttgatcggatcgctctgaaacttcccc 34821222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 35142121 - 35142353
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||| |||||||||||        |||||||||||||||||  ||| ||||||||||||||| |||||||| |    
T  35142121 gattacataatccggaaaccccctaaacaccattttttaaggtaaaac---agttcggattatataatatgaattgtatcagcacaaattctaaacatgt 35142217  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| |||||||  |||||||||||||||||||||||| |||||| |  ||||||||||| |||  ||||||||||||||||  || ||    
T  35142218 ttgtaacatggatagtcattttaaagacaatattaatcttcctaactctcatccttctgctttgggtcattgttatctgttcttagtcaaaaactgggtt 35142317  T
Q  207 ttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||||||||||||||||||||||  |||||||||    
T  35142318 ttcgggctacttgatcggattgctccgaaacttccc 35142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 3902918 - 3902697
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  3902918 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgt 3902822  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| ||   ||||||| ||||||||||||||||| ||||||| |||||| |  ||||||||||| |||| |||||||||||||||||||| ||    
T  3902821 ttgtaacatggatgatcattttatggacaatattaatcttcataactctcatccttctgctttgggtcattgttacatgttcttagtcaaaaatcgggtt 3902722  T
Q  207 ttcgggctacttgatcggattgctc 231  Q
    ||| |  ||||||||||||||||||    
T  3902721 ttcagattacttgatcggattgctc 3902697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 47123136 - 47123294
Alignment:
Q  73 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 172  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47123136 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47123235  T
Q  173 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47123236 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47123294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 65 - 243
Target Start/End: Complemental strand, 49096284 - 49096105
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttt 163  Q
    ||||||||||| ||| |||||||||||||||  ||||||| ||||||||||  |||| ||||||||||| |||||| ||||||||||||||| ||||||     
T  49096284 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatagatagtcattttagggaacaatataaatcttcctaactctcatccttc 49096185  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | ||||| |||||| |||| ||||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  49096184 tgttttgagtcattgttacctgttcttcgtcaaaaatcgagttttcgggctacttgatcggattgctccaaaacttcccc 49096105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 73 - 231
Target Start/End: Original strand, 47130502 - 47130660
Alignment:
Q  73 atccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttggg 172  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||| | |  ||||||||||||||||||||||||||||||||| |||||| | |||||||    
T  47130502 atccgaactgtatcagcacaaattctaaacatgtttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccttctgttttggg 47130601  T
Q  173 tcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     |||| |||| |||||||||| ||||| || ||||||||||||||||||||||||||||    
T  47130602 ccattgttacctgttcttagttaaaaaccgaattttcgggctacttgatcggattgctc 47130660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 501199 - 501032
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| ||||| ||||||||| |||||||| ||||||| ||| |||| ||||||| |||||||||||||||||||| |||| ||||||     
T  501199 gattatataatccgaactgtataagcacaaattctaaacatgtttgtaaaatggatagtcattttatggacaatattaatcttcctagctctcatccttc 501100  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | |||||||||||| |||| |||| ||| |||||||||   |||||||||||||||||||||||||||    
T  501099 tgttttgggtcattgttacatgtttttattcaaaaatcatgttttcgggctacttgatcggattgctc 501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 46622848 - 46622686
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||           | |||| ||||||||||||||||||||||||||| ||||| |    
T  46622848 agttcggattatataatccgaactgtatcagcacaaattctaaacat-----------ggatagtcattttagggacaatattaatcttccttactctca 46622760  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | ||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46622759 ttcttctgttttgggtcattgttacttgttcttagtcaaaaatcggattttcggactacttgatcggattgctc 46622686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 47739990 - 47739812
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  |||| ||||| ||||||||||||||||||| ||||||| ||||||     
T  47739990 gattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatagatagtcatttaagggacaatattaatcttcataactctcatccttc 47739891  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | |||| ||||||| |||| || | ||||| |||||| || ||||||||||||||||||||||||||| |||||||||||    
T  47739890 tgtttt-ggtcattattacctggttttagttaaaaattgggttttcgggctacttgatcggattgctccaaaacttcccc 47739812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 51258505 - 51258672
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttt 163  Q
    ||||||||||||||| |||||||||||||||  ||||||| ||| ||||||| |||| ||||||||||| |||||||||||||| ||||||| |||||||    
T  51258505 attatataatccgaactgtatcagcacaaattttaaacatgtttataacatggatagtcattttagggaacaatattaatcttcataactctcatccttt 51258604  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | ||||| |||||| |||| |||||||||||||||||||  ||||||| | |||||||||||||||||    
T  51258605 tgttttgagtcattgttacatgttcttagtcaaaaatcgagttttcggacaacttgatcggattgctc 51258672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 30721869 - 30721690
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||||| ||||||||   | |   ||||||||||||||||||||||||||||||||||    
T  30721869 tagttcagattatataatccgaactgtatcagcacaaattctaaacatgtttgtaac---tct---cattttagggacaatattaatcttcctaactctt 30721776  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||| | ||||||||||||  |||  ||| |||||||||||| || |||||| ||||||||||||||||||||  |||||||||    
T  30721775 atccttctgttttgggtcattgatacccgttattagtcaaaaattgggttttcgagctacttgatcggattgctccgaaacttccc 30721690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 58 - 211
Target Start/End: Complemental strand, 51540678 - 51540525
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| |||  |||||||||||||| |||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||| |    
T  51540678 agttcggattatataatctgaatagtatcagcacaaattctaaacatgtttgtaacttggatagtcattttagggacaatattaatcttcctaactctca 51540579  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 211  Q
    ||||| |  ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  51540578 tccttctcctttgggtcattgttacacgttcttagtcaaaaatcgggttttcgg 51540525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 39149904 - 39150089
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||| |||||||||||||| | |||||||||||||  ||||||| ||||||||||   ||| |||||||| |||||||||||| ||||||||||| |    
T  39149904 agttcgggttatataatccgaactctatcagcacaaattttaaacatgtttgtaacattggtagtcattttagagacaatattaattttcctaactctca 39150003  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||| | |||| |||||||||| ||||| ||| ||||||||||||||| ||| |||||||  ||||||||||    
T  39150004 tccttctgttttgggtcactgttacatgttcttagttaaaaaccgggttttcgggctacttggtcgaattgctccgaaacttcccc 39150089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 3937473 - 3937563
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 147  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  3937473 tagttcggattatataatccgaactgtatcagcacaaatcctaaacatatttgtaacatgtataaccattttatggacaatattaatcttc 3937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 138 - 243
Target Start/End: Original strand, 3938357 - 3938462
Alignment:
Q  138 attaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaac 237  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||| | |||||||| ||||||||||||||||||| ||||    
T  3938357 attaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatctggttttcgggttacttgatcggattgctctgaaac 3938456  T
Q  238 ttcccc 243  Q
    ||||||    
T  3938457 ttcccc 3938462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 33438616 - 33438731
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||| |    
T  33438616 agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactctca 33438715  T
Q  158 tccttttattttgggt 173  Q
    ||||| | ||||||||    
T  33438716 tccttctgttttgggt 33438731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 5127955 - 5127782
Alignment:
Q  66 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 165  Q
    |||||||||| ||| |||||||||| ||||  ||||||| ||||||||||| ||| |||||||| ||||||||||||||||| || |||| |||| |||     
T  5127955 ttatataatctgaattgtatcagcataaattttaaacatgtttgtaacatggatatccattttatggacaatattaatcttcatagctctcatccatttg 5127856  T
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    ||||| |||||| ||| |||||||| |||||||||| | ||||||| ||||||||| | |||||| | ||||||    
T  5127855 ttttgcgtcattgttagttgttcttggtcaaaaatctggttttcggactacttgattgaattgctttgaaactt 5127782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 40062473 - 40062645
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||||||| | |||||||||||||  | |   | ||||||||||| ||| | | ||||  ||| ||||||||||||||||||||     
T  40062473 tagttcggattatataatccgaactatatcagcacaaattttgagtttgtttgtaacatggataactagtttaaagaccatattaatcttcctaactctg 40062572  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgc 229  Q
     ||||||| |||| ||||||| ||| ||||||||||||||||||| | |||||||||||||||||| ||||||    
T  40062573 gtccttttgttttaggtcattattagttgttcttagtcaaaaatctggttttcgggctacttgatcagattgc 40062645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 100 - 243
Target Start/End: Complemental strand, 35345931 - 35345788
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 199  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||| || |||||||| |||||||| ||||  |||||| ||| |||||||||||||||||    
T  35345931 aacatgtttgtaacatggatagtcattttatggacaatattaatatttctaactctcatccttttgtttttcgtcattgttagttgttcttagtcaaaaa 35345832  T
Q  200 tcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | || |||||||| || |||||||||||||||  ||||||||||    
T  35345831 ttgggttttcgggttaattgatcggattgctccgaaacttcccc 35345788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 51492894 - 51493080
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||| ||||||||||| ||||  ||||||||| |||| ||| ||||||| ||| ||||  |||||| ||||||||||||||||||||||||| |    
T  51492894 agttcggattttataatccgaactgtactagcacaaattctaatcatgtttgtaatatgaatagttattttatggacaatattaatcttcctaactctca 51492993  T
Q  158 tccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||| ||||||| |||  ||||||||||  |||||| || |||| || |||||||||| ||||||||  ||||||||||    
T  51492994 tccttatgtttttggtcattgttagctgttcttagtaaaaaaattgggtttttggcctacttgatcagattgctccgaaacttcccc 51493080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 46624863 - 46624988
Alignment:
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||| ||| ||||| |||||||||||||  ||    
T  46624863 tttgtaacatgtatagtcattttatggaaaatattaatcttcctaactctcatccttctgttttgggtcattattagttgttattagtcaaaaatctaat 46624962  T
Q  206 tttcgggctacttgatcggattgctc 231  Q
    ||| || ||||||||||| |||||||    
T  46624963 ttttggactacttgatcgaattgctc 46624988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 29048444 - 29048610
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||| ||| | ||||| ||||||| || || || ||||||||||| | ||  |||||| ||| ||||||||||||| ||||||||||||||     
T  29048444 gattatataatcggaactatatcaacacaaattctgaatatgtttgtaacatg-acagttattttaaggataatattaatcttcataactcttatcctta 29048542  T
Q  164 tattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgct 230  Q
    | |||| ||||||| |||  ||||||||||  ||||||| | ||||| ||||||||||||||||||||    
T  29048543 tgttttaggtcattgttaactgttcttagtataaaaatctggttttcaggctacttgatcggattgct 29048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 47980063 - 47979895
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-- 162  Q
    ||||||||||||||| |||||||||||||||  | ||||||||| ||||||  |||| ||||||| |||||||||||||||| |||||||| ||   |      
T  47980063 attatataatccgaactgtatcagcacaaattttgaacatatttataacatagatagtcattttaaggacaatattaatctttctaactctcatggatag 47979964  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | ||||| ||||||| ||| ||||| ||| |||||||    |||| |||||||||||||| ||||||||    
T  47979963 tcattttaggtcattgttagttgttattaatcaaaaaatcaatttccgggctacttgatcagattgctc 47979895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 54229961 - 54229776
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| | || ||||||| ||||||| || |   | ||||||||||| ||| ||| |||| |||| |||||||||||||| ||||  |    
T  54229961 agttcggattatataattcaaactgtatcaacacaaattctgagtctgtttgtaacatgaatatccagtttaaggaccatattaatcttccttactcgca 54229862  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || || | || | ||||||| ||| ||||| ||||||||||||  | |||||  ||||||||||| ||||||||| ||||||||||    
T  54229861 tcattatgttctaggtcattgttagttgttattagtcaaaaattcggttttcttgctacttgatcagattgctctgaaacttcccc 54229776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 14828983 - 14828809
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||| ||||||||||||||||| | ||| | | ||||| ||||| || ||| ||||||| |||   |||||| ||| ||||||||||||| |||| || |    
T  14828983 agtttggattatataatccgaaatatattaacgcaaattctaaatatgtttataacatggataataattttaaggataatattaatcttcataaccctca 14828884  T
Q  158 tccttttattttgggtcattcttacttgttcttagtca-aaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||| | | ||||||||| || ||| ||||||||||||| |||||| |||||||||  |||||||| |||||||||    
T  14828883 tccatctgttttgggtccttgttagttgttcttagtcaaaaaatctgattttcggattacttgattggattgctc 14828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 47769359 - 47769530
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    ||||||||||| |||| ||| ||||||||| ||||| || ||||| ||||||||||| |||| ||||||| | |  |||||||||||  ||||| | |||    
T  47769359 ttcggattatagaatctgaattgtatcagcgcaaattctgaacatgtttgtaacatggatagtcattttaagaatcatattaatctttttaactatcatc 47769458  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     || |||||| ||||||| ||| ||||||  |||| ||||   ||| |||||| || |||||||||||||||    
T  47769459 attctattttaggtcattgttagttgttcccagtcgaaaaaatgatattcgggttatttgatcggattgctc 47769530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 126 - 243
Target Start/End: Complemental strand, 4300276 - 4300159
Alignment:
Q  126 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 225  Q
    |||| ||||||||||||||||||||||| | |||||||| | || ||||||| |||  |||||||||| |||||||   |||| |||||  |||||  ||    
T  4300276 tttaaggacaatattaatcttcctaactatcatccttttgtattaggtcattgttagatgttcttagtaaaaaatccagtttttgggcttattgattaga 4300177  T
Q  226 ttgctctaaaacttcccc 243  Q
    ||||||||||||||||||    
T  4300176 ttgctctaaaacttcccc 4300159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 33439384 - 33439449
Alignment:
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||||||||| |||||| |||||||| ||||||| ||||||||| |||||||||||||||||||    
T  33439384 ttttgggtcattgttactttttcttagttaaaaatcagattttcggactacttgatcggattgctc 33439449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 58 - 153
Target Start/End: Complemental strand, 45712148 - 45712053
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 153  Q
    |||||||||||||||||| ||| |||||||||||||||  | | ||| ||||||||||| |||  |||||||  ||| ||||||||||||||||||    
T  45712148 agttcggattatataatctgaactgtatcagcacaaattatgatcatgtttgtaacatggataatcattttaaagaccatattaatcttcctaact 45712053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 187
Target Start/End: Complemental strand, 27143473 - 27143351
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||| ||  ||||||||||||||| || ||||| ||||||||||| ||||  |||||| ||| ||||||||  ||||||||  | |||||| |    
T  27143473 attatataatctgatctgtatcagcacaaattctgaacatgtttgtaacatggatagttattttaaggataatattaagattcctaaccatcatccttct 27143374  T
Q  165 attttgggtcattcttacttgtt 187  Q
    ||||||| ||||| ||| |||||    
T  27143373 attttggatcattgttagttgtt 27143351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 151
Target Start/End: Complemental strand, 26053584 - 26053491
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggg-acaatattaatcttcctaa 151  Q
    |||| ||||||||||||| || ||||||| ||||||| |||||||| ||| |||| || |||| |||||||||| |||||| ||||||||||||    
T  26053584 gttctgattatataatccaaactgtatcaacacaaattctaaacatgtttataacttggatagtcattttagggaacaatactaatcttcctaa 26053491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 29035893 - 29036013
Alignment:
Q  58 agttcggattatataatccgaagtgt-atcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||| ||||||||||| ||| ||| |||| ||||||| |||| ||| ||||||||||| |||  ||||||| |||| |||||| |||||||||||||     
T  29035893 agttcgaattatataatctgaactgttatcaacacaaattctaagcatgtttgtaacatggataatcattttaaggaccatattactcttcctaactctc 29035992  T
Q  157 atccttttattttgggtcatt 177  Q
    ||| || | |||| |||||||    
T  29035993 atcattatgttttaggtcatt 29036013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 8735530 - 8735592
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  8735530 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 8735592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 9087771 - 9087833
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||| | ||||||    
T  9087771 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactttcatcctt 9087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 33842098 - 33842034
Alignment:
Q  98 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||| ||||||| ||| |||| ||||||| ||||||||||||| ||| ||||||| ||||||    
T  33842098 taaacatgtttgtaatatggatagtcattttaaggacaatattaatgttcgtaactctcatcctt 33842034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 29035809 - 29035880
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccatttta 129  Q
    ||||||||||||||||| |||| ||||| |  |||||| || ||||| ||||||||||| |||| |||||||    
T  29035809 agttcggattatataattcgaattgtatgaatacaaattctgaacatgtttgtaacatggatagtcatttta 29035880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 45244514 - 45244577
Alignment:
Q  87 agcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    ||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||    
T  45244514 agcaccaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttccta 45244577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 46555445 - 46555554
Alignment:
Q  68 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 167  Q
    |||||||| ||| ||||| |||||||||  | |  || ||| ||||||  ||| |||||||| |||| |||||||||||| ||||||| |||||| | ||    
T  46555445 atataatctgaattgtataagcacaaattttgagtatgtttataacatagataaccattttaaggaccatattaatcttcataactctcatccttctgtt 46555544  T
Q  168 ttgggtcatt 177  Q
    || |||||||    
T  46555545 ttaggtcatt 46555554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 8735309 - 8735373
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||| ||||||    
T  8735309 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattccta 8735373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 9087550 - 9087614
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    |||||| ||| || ||||| ||| ||||||| |||| ||||||| ||||||||||||| ||||||    
T  9087550 cagcaccaattctgaacatgtttataacatggatagtcattttaaggacaatattaatattccta 9087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 3e-77; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 34972922 - 34973151
Alignment:
Q  11 tacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttg 109  Q
    |||||||||| ||||||||| ||||||| |||||||||||       ||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  34972922 tacataatccgaaaaccccctaaacaccattttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcataaatcctaaacatatttg 34973018  T
Q  110 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||  |||||||||||||||||||| |||||    
T  34973019 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttgttttaggtcattgttatctgttcttagtcaaaaatcgggttttc 34973118  T
Q  210 gggctacttgatcggattgctctaaaacttccc 242  Q
     | |||||||||||||||||||| |||||||||    
T  34973119 agactacttgatcggattgctctgaaacttccc 34973151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 6228878 - 6228693
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6228878 tagttcggattatataatccgaactgtatcaactcaaatcctaaagatattagtaacatgtatagccattttagggacaatattaatcttcctaactctt 6228779  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||||| |||||||||||| |||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  6228778 atccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcgggctatttgatcggattgctctaaaacttccc 6228693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 32441866 - 32442098
Alignment:
Q  8 gattacataatccaaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 107  Q
    |||||||||||||  ||||||| ||||||  |||||||||||       |||||||||||||||||||| || |||| ||||||| ||| ||||||||||    
T  32441866 gattacataatccggaaacccctaaacacatttttttaaggtaaaa---tagttcggattatataatccaaactgtaccagcacatatcgtaaacatatt 32441962  T
Q  108 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 207  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||  |||    
T  32441963 tgtaacatgtataaccattttaaagacaatattaatcttcctaactcttatccttttgttttgggtcattgttacctgttcttagtcaaaaatcgagttt 32442062  T
Q  208 tcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||||||||||| ||||||||||    
T  32442063 tcgggctacttgatcggattgctctgaaacttcccc 32442098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 57 - 239
Target Start/End: Complemental strand, 6003738 - 6003556
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||    
T  6003738 tagttcggattatataatccgaactgtatcggcacaaatcataaacatatttttaatatgtatagtcattttagggataatattaatcttcctaactctt 6003639  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |||||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||||||    
T  6003638 atccttttgttttgggtcattgttacttgttcttagtcaaaaatcaggttttcgggctacttgattggattgctctgaaactt 6003556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 49397110 - 49397299
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccat----tttagggacaatattaatcttcctaac 152  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| ||||    |||||||||||||||||||||||||||    
T  49397110 tagttcggattatataaaccgaactgtatcagcaaaaatcctaaacatatttgtaacatgtataaccatccattttagggacaatattaatcttcctaac 49397209  T
Q  153 tcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||||||||| ||||| |||||| |||| |||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  49397210 tcttatccttttgttttgagtcattgttacatgttcttagtcaaaaatcgggttttcgagctacttgatcggattgctctgaaacttccc 49397299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 41413212 - 41412977
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatata--atccgaagtgtatcagcacaaatcctaaacat 104  Q
    |||||||||||||  |||||||| |||||| ||||||||||||       ||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  41413212 gattacataatccggaaaccccctaaacactcttttttaaggtaaaa---tagttcggattatatataatccgaactgtatcagcacaaatcctaaacat 41413116  T
Q  105 atttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgga 204  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||| |||| ||||||| |||| |||||||| ||||||||| |     
T  41413115 atttgtaacatgtatagtcattttaggaacaatattaatcttcctaactcttatcattttgttttaggtcattgttacatgttcttaatcaaaaatctgg 41413016  T
Q  205 ttttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||||| ||||| ||| ||||||||||    
T  41413015 ttttcgggctacttgatcagattgttctgaaacttcccc 41412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 62 - 241
Target Start/End: Complemental strand, 53894085 - 53893906
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  53894085 cggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatctttctaactctcatcct 53893986  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    | | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||||||||||||| ||||||||    
T  53893985 tctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaacttcc 53893906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 2506143 - 2505922
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||| ||||||||||||||||| |||||||||||||||  ||||||| |    
T  2506143 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agtttggattatataatccgaactgtatcagcacaaattttaaacatgt 2506047  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||| |||| ||||||||||||| |||||| ||    
T  2506046 ttgtaacatggatagtcattttagggacaatattaatcttcctaattctcatccttctgttttgggtcattgttacatgttcttagtcaataatcgggtt 2505947  T
Q  207 ttcgggctacttgatcggattgctc 231  Q
    |||||||||||||||||||||||||    
T  2505946 ttcgggctacttgatcggattgctc 2505922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 25491457 - 25491274
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |||    
T  25491457 ttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctcatc 25491358  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | |||||||||||| |||| |||||||||||||||||||| |||| || ||||||||||||||||||| |||| ||||||    
T  25491357 cttctgttttgggtcattgttacatgttcttagtcaaaaatcgggtttttggactacttgatcggattgctccaaaatttcccc 25491274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 40703767 - 40703952
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  40703767 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 40703866  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||  | |||||||||||||||||| |||| || ||||||||||||||||||   ||||||||||    
T  40703867 tccttctgttttgggtcattgttatcttttcttagtcaaaaatcgggtttttggactacttgatcggattgctaagaaacttcccc 40703952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 48319125 - 48318956
Alignment:
Q  61 tcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 160  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| ||||    
T  48319125 tcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatcc 48319026  T
Q  161 ttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 230  Q
    || | |||||||||||| |||  | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  48319025 ttctgttttgggtcattgttatctattcttagtaaaaaatcggattttcggactacttgatcggattgct 48318956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 19835575 - 19835796
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  19835575 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgt 19835671  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| || | ||||| |||||| |||| |||| |||||||||| |||| ||    
T  19835672 ttgtaacatggatagtcattttaggaacaatattaatcttcctaactctcatctttctgttttgcgtcattgttacctgtttttagtcaaaagtcgggtt 19835771  T
Q  207 ttcgggctacttgatcggattgctc 231  Q
    ||||| |||||||||||||||||||    
T  19835772 ttcggactacttgatcggattgctc 19835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 58 - 240
Target Start/End: Complemental strand, 17933201 - 17933019
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||||||||  |||||||||||||| |||||||| ||||||||||| |||  ||||||||||||| ||||||||||||||||||| |    
T  17933201 agttcggattatataatccgaacagtatcagcacaaattctaaacatgtttgtaacatggataatcattttagggacattattaatcttcctaactctca 17933102  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 240  Q
    ||||| | |||||||||||| |||| |||||||||| ||||||| ||||||| | | |||||||||||||||||  |||||||    
T  17933101 tccttctgttttgggtcattgttacctgttcttagtaaaaaatcagattttcagaccacttgatcggattgctccgaaacttc 17933019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 55052683 - 55052498
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| ||||||||||||||| | ||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||||| | |    
T  55052683 agttcgaattatataatccgaactttatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatgttaatcttcctaactatca 55052584  T
Q  158 tcctttta-ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||  | |||| ||||||| |||| ||||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  55052583 tccttccattttttggtcattgttacctgttcttagtcaaaaatcgaattttcgggctacttgattggattgctccgaaacttccc 55052498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 231
Target Start/End: Complemental strand, 31582534 - 31582313
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| |    
T  31582534 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaattgtatcagcacaaattctaaacatgt 31582438  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||| | ||||| ||||| ||||||||||| |||||| | |||||||||||| |||| ||||||||||||||||||   ||    
T  31582437 ttgtaacatggatagtcattttatgaacaatgttaattttcctaactctcatccttctgttttgggtcattgttacatgttcttagtcaaaaatctagtt 31582338  T
Q  207 ttcgggctacttgatcggattgctc 231  Q
    ||||||||| |||||||||||||||    
T  31582337 ttcgggctaattgatcggattgctc 31582313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 25752556 - 25752322
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||| ||||||||  ||||||||||||| |||||        |||||||||||||| ||||||| ||||| ||||||||| |||||||| |    
T  25752556 gattacataatccgaaaaccccataaacaccctttttcaaggtaaaac---agttcggattatatgatccgaaatgtattagcacaaattctaaacatgt 25752460  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    |||||||||| |||| ||||||| ||||||||| |||||||||| |||| ||| || |  |||||||| ||| |||| |||||||||||||||||||| |    
T  25752459 ttgtaacatggatagtcattttaaggacaatatcaatcttcctagctctcatctttatgtttttgggtgattgttacctgttcttagtcaaaaatcgggt 25752360  T
Q  206 tttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||| ||||||||  ||||||||||    
T  25752359 tttcgggctacttgatcagattgctccgaaacttcccc 25752322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 46440386 - 46440151
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||||||||||||||||||| | ||||||||||||| ||||||||      
T  46440386 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactatatcagcacaaattctaaacatgg 46440290  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac--ttgttcttagtcaaaaatcgga 204  Q
    |||||||||| |||  |||||||||||||||| |||||||| ||||||| |||||| | |||| | ||||| ||||   |||||||| ||||||||||||    
T  46440289 ttgtaacatggatattcattttagggacaatactaatcttcataactctcatccttctcttttagatcattgttacctgtgttcttaatcaaaaatcgga 46440190  T
Q  205 ttttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||| |||||||||||||||||||  ||||||||||    
T  46440189 ttttcggactacttgatcggattgctccgaaacttcccc 46440151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 7931760 - 7931931
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| | ||| ||||||||| |||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||| |    
T  7931760 agttcggattatataatctgaactatattagcacaaattctaaacatgtttgtaacatggatagttattttagggacaatattaatcttcctaactctca 7931859  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgct 230  Q
    ||| | | |||||||||||| |||| |||| || |||||||||||  ||||||| ||||||| ||||||||||    
T  7931860 tcc-tctgttttgggtcattgttacatgtttttggtcaaaaatcgagttttcggactacttggtcggattgct 7931931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 8106495 - 8106682
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactct 155  Q
    |||||| |||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| || |||| |||||||| ||||||||    
T  8106495 tagttcagattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagaacaatgttaatctttctaactct 8106594  T
Q  156 tatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
     |||||| | ||||| |||||| |||| |||||||| ||||||||| | |||| ||||||||||||| |||| |||  ||||||||||    
T  8106595 catccttctgttttgagtcattgttacctgttcttattcaaaaatcaggtttttgggctacttgatcagattactccgaaacttcccc 8106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 128 - 243
Target Start/End: Complemental strand, 54631486 - 54631371
Alignment:
Q  128 tagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  54631486 tagggacaatattaatcttcctaactctcatccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcggactacttgatcggatt 54631387  T
Q  228 gctctaaaacttcccc 243  Q
    |||| |||||||||||    
T  54631386 gctccaaaacttcccc 54631371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 38536273 - 38536455
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||||  || |||||| |||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||| |    
T  38536273 agttcggattatataatctaaattgtatctgcacaaattctaaacatgtttgtaacatgaatagtcattttatggacaatattaatcttcctaactctca 38536372  T
Q  158 tcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |  || |  |||| ||||||| |||| ||||||||||||||||||   ||||| |||||||||||||||||| || |||||||    
T  38536373 ttattctgtttttaggtcattgttacatgttcttagtcaaaaatcaagttttcaggctacttgatcggattgttccaaaactt 38536455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 85 - 243
Target Start/End: Original strand, 52089315 - 52089473
Alignment:
Q  85 tcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttactt 184  Q
    |||||||||||| ||||||| ||||||||||| |||| |||||| |||||||||||||| ||||||||| | || ||| |  ||||||||||| |||| |    
T  52089315 tcagcacaaatcttaaacatgtttgtaacatggatagtcatttttgggacaatattaattttcctaactttcattcttctggtttgggtcattgttacct 52089414  T
Q  185 gttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||||| |||| || ||||||||||||||||||  |||||||||||    
T  52089415 gttcttagtcaaaaatcgggtttttggactacttgatcggattgcttcaaaacttcccc 52089473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 27742169 - 27742004
Alignment:
Q  67 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatcctttta 165  Q
    ||||||||  ||| |||||||||||||||  ||||||| ||||||||||  ||||  |||||||||| |||||||||||||||||||||| |||||| |     
T  27742169 tatataatttgaattgtatcagcacaaattttaaacatgtttgtaacataaatagttattttagggaacaatattaatcttcctaactctcatccttctg 27742070  T
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| ||||||  ||| | |||||||||||||||||| |||||||||||||| ||||||||||||    
T  27742069 ttttgagtcattggtacattttcttagtcaaaaatcgggttttcgggctacttaatcggattgctc 27742004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 82 - 231
Target Start/End: Complemental strand, 41323132 - 41322983
Alignment:
Q  82 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctta 181  Q
    |||||| ||||||| |||||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||||| |||||||| |||| ||||||| |||    
T  41323132 gtatcaacacaaattctaaacatgtttgtaacatggataatcattttatggacaatattaatcttcctaactctcatccttttgtttttggtcattgtta 41323033  T
Q  182 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     ||||||||||| |||||| |  |||||||  ||||||||||||||||||    
T  41323032 attgttcttagttaaaaattgagttttcggcatacttgatcggattgctc 41322983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 7863544 - 7863717
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||| | |  ||||||| ||||||||||||| ||||||||| |||    
T  7863544 agttcggattatataatctgaactgtatctgcacaaattctaaacatgtttgtaacatggacaatcattttaaggacaatattaatattcctaactttta 7863643  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||| |||||||  ||  |||||||| | ||||||  | |||||||||||||| ||| ||||||||    
T  7863644 tccttctgttttaggtcattggtaactgttcttaataaaaaattcggttttcgggctacttaatcagattgctc 7863717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 66 - 216
Target Start/End: Complemental strand, 3703305 - 3703155
Alignment:
Q  66 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 165  Q
    ||||||||| | || ||||||||||||||| |||||||| ||||||||||  |||| ||||||||| | ||||||||||||| ||||||| |||||| |     
T  3703305 ttatataattcaaactgtatcagcacaaattctaaacatttttgtaacatagatagtcattttaggaagaatattaatcttcataactctcatccttctg 3703206  T
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctac 216  Q
    |||| ||||| | |||| |  | ||||||||||||||||||||||||||||    
T  3703205 ttttaggtcaatgttacctacttttagtcaaaaatcggattttcgggctac 3703155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 25539019 - 25538873
Alignment:
Q  82 gtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-ttattttgggtcattctt 180  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||| ||| ||||||| ||||||    |||||||||||| ||    
T  25539019 gtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaattttcttaactctcatccttccgtttttgggtcattgtt 25538920  T
Q  181 acttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
    || | |||||||||||||||  | ||||| ||||||||||| |||||    
T  25538919 acctcttcttagtcaaaaatttggttttcaggctacttgattggatt 25538873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 14474268 - 14474103
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||| ||| ||||||| |||||||  | ||||| ||||||||||| |||| | ||| ||  |||||||||||||||||||| || |||||| |    
T  14474268 attatataatctgaattgtatcaacacaaattttgaacatgtttgtaacatggatagtcgtttaaga-acaatattaatcttcctaaccctcatccttct 14474170  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| ||||||| |||| |||||||  |||||||||   |||||  ||||||||||||||||||||    
T  14474169 attttaggtcattgttacctgttcttgatcaaaaatcctgttttcaagctacttgatcggattgctc 14474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 150 - 239
Target Start/End: Original strand, 29822775 - 29822864
Alignment:
Q  150 aactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |||||| |||||| | |||||||||||| |||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  29822775 aactctcatccttctgttttgggtcattgttacatgttcttaatcaaaaattggattttcgggctacttgatcggattgctcaaaaactt 29822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 58 - 199
Target Start/End: Original strand, 27879651 - 27879792
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| |||||||||||| ||| ||||||||||||||| || |||||  |||||||||| || | ||||||| |||| |||||||| ||||||||||| |    
T  27879651 agttcagattatataatctgaactgtatcagcacaaattctgaacatgcttgtaacatgaatggtcattttaaggaccatattaatattcctaactctca 27879750  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaa 199  Q
    |  |||| |||| | ||||| ||| |||||| ||||||||||    
T  27879751 taattttgttttagatcattgttagttgttcctagtcaaaaa 27879792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 106 - 243
Target Start/End: Original strand, 47456751 - 47456888
Alignment:
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    ||||||||||| ||| | | |||| |||| |||||||||||||||| ||| |||||| | |||| ||||||| |||  | |||||||||||||||  | |    
T  47456751 tttgtaacatggataactagtttaaggaccatattaatcttcctaaatctcatccttatgttttaggtcattgttagatattcttagtcaaaaattcggt 47456850  T
Q  206 tttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||| ||||||||  ||||||||||    
T  47456851 tttcgggctacttgatcagattgctccgaaacttcccc 47456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 23523961 - 23524071
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacaccctttttt-aaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacata 105  Q
    |||||||||||||| |||||||| |||||||||||||| |||||       || |||||||||||||||||  | |||||||||||||||||||||||||    
T  23523961 gattacataatccagaaaccccctaaacaccctttttttaaggtaaaa---taattcggattatataatccacactgtatcagcacaaatcctaaacata 23524057  T
Q  106 tttgtaacatgtat 119  Q
    ||||||||||||||    
T  23524058 tttgtaacatgtat 23524071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 37222064 - 37222206
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa-tcttcctaactctt 156  Q
    |||||||||||||||||  ||| |||||||||| |||| |||||||| ||||||||||| ||| ||| |||| |||| ||||||| ||||| ||| |||     
T  37222064 agttcggattatataatttgaattgtatcagcataaattctaaacatgtttgtaacatggataaccactttaaggaccatattaattcttcttaa-tctc 37222162  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaat 200  Q
    ||| || | |||||||||||| ||| ||||||||||| ||||||    
T  37222163 atcattctgttttgggtcattgttagttgttcttagtaaaaaat 37222206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 183 - 243
Target Start/End: Original strand, 38417020 - 38417080
Alignment:
Q  183 ttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  38417020 ttgttcttagtcaaaaatcgggttttcgagctacttgatcggagtgctctaaaacttcccc 38417080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 49001518 - 49001451
Alignment:
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||||||||||| |||  ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  49001518 tattttgggtcattgttaactgttcatagtcaaaaatctgattttcgggctacttgatcggattgctc 49001451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 189
Target Start/End: Complemental strand, 42497939 - 42497809
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 158  Q
    ||||||||||||||||| ||| |||||||||||||||  | | | | |||||||| | |||||| | |||| |||| ||||||||||| |||||||| ||    
T  42497939 gttcggattatataatctgaattgtatcagcacaaattatgagcttgtttgtaacttatatagctagtttaaggaccatattaatctttctaactctcat 42497840  T
Q  159 ccttttattttgggtcattcttacttgttct 189  Q
    | |||| |||| ||||||| ||| |||||||    
T  42497839 cattttgttttaggtcattgttagttgttct 42497809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 49002916 - 49002822
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 154  Q
    |||| |||||||| ||| || | ||||||||||||| ||||| || ||||||||||  |||| ||||||| ||| ||||||||||||||||||||    
T  49002916 ttcgaattatatattccaaactatatcagcacaaattctaaatatgtttgtaacataaatagtcattttatggaaaatattaatcttcctaactc 49002822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 25140570 - 25140466
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||  |||| ||||  | |||| ||| ||| || ||||| |||||||||||||||  ||||||| | ||||||||||||||||||||||| |    
T  25140570 agttcggattacgtaattcgaatagcatcaacaccaattctgaacatgtttgtaacatgtataatcattttaagaacaatattaatcttcctaactctca 25140471  T
Q  158 tcctt 162  Q
    |||||    
T  25140470 tcctt 25140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 25140779 - 25140687
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    |||||||||||  |||||||||  | |||||||| ||| || ||||| ||||||||||| |||| ||||||  ||||||||||||||||||||    
T  25140779 agttcggattacgtaatccgaacagcatcagcaccaattctgaacatgtttgtaacatggatagtcattttgaggacaatattaatcttccta 25140687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 47784101 - 47784188
Alignment:
Q  68 atataatccgaagtgtatcagcacaaatcctaaaca-tatttgtaacatgtatagccattttagggacaatattaatcttcctaactct 155  Q
    |||||||||||| | ||||||||||||| ||||||| | ||||||| ||| |||| ||||||| |||||||||||||| ||||||||||    
T  47784101 atataatccgaactatatcagcacaaattctaaacattgtttgtaatatggatagtcattttaaggacaatattaatc-tcctaactct 47784188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 47873953 - 47874037
Alignment:
Q  98 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttac 182  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||||||||| ||| ||| |||||| | |||||| ||||| ||||    
T  47873953 taaacatgtttataacatggatagtcattttagggacaatattaatcttcttaattctcatccttctgttttggatcattgttac 47874037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 55838978 - 55838875
Alignment:
Q  136 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 235  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | ||||||||||||    
T  55838978 atattaatctccctaactctaatccttatgttttaggtcattgttagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctctaaa 55838879  T
Q  236 actt 239  Q
    ||||    
T  55838878 actt 55838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 29822724 - 29822773
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttg 109  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  29822724 ttcggattatataatccgaactgtatcagcacaaattctaaacatgtttg 29822773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 25140944 - 25140894
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    ||||| ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  25140944 aacatgtttgtaacatggatagtcattttaaggacaatattaatcttccta 25140894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 4936666 - 4936614
Alignment:
Q  184 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaa 236  Q
    |||||||||| ||||||| |||||| |||||| ||||||||||||||| ||||    
T  4936666 tgttcttagttaaaaatctgatttttgggctatttgatcggattgctccaaaa 4936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 55774800 - 55774704
Alignment:
Q  136 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctct 232  Q
    |||||||||| ||||||||| |||||| | |||| ||||||| ||| ||||||  |||| |||||  | |||||||||||||| | | |||||||||    
T  55774800 atattaatctccctaactctaatccttatgttttaggtcattattagttgttcccagtcgaaaatttggttttcgggctacttaaccagattgctct 55774704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 1788175 - 1788238
Alignment:
Q  136 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaa 199  Q
    |||||||||||| ||||||| || ||| | |||| ||||||| ||||||||||||||| |||||    
T  1788175 atattaatcttcataactctcattcttctgttttaggtcattgttacttgttcttagtaaaaaa 1788238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 38416937 - 38417004
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaaca-tgtatagccattttagg 131  Q
    ||||||||||| ||| |||||||||||||||  ||||||| ||||||||| || |||| |||||||||    
T  38416937 attatataatctgaactgtatcagcacaaattttaaacatgtttgtaacattggatagtcattttagg 38417004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 39118308 - 39118367
Alignment:
Q  118 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 177  Q
    ||||||| |||| |||| ||||||||||| ||||||||||||||| || ||| |||||||    
T  39118308 atagccagtttaaggaccatattaatcttactaactcttatccttctaatttaggtcatt 39118367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 239
Target Start/End: Original strand, 20078719 - 20078832
Alignment:
Q  126 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 225  Q
    |||| |||| |||||||| |||||| |||  |||||| | |||| ||||||| ||| |  ||||||||  |||||| | |||| |||||||||||||  |    
T  20078719 tttaaggaccatattaatattcctagctcgcatccttctgttttaggtcattgttagtctttcttagtttaaaatctggtttttgggctacttgatcaaa 20078818  T
Q  226 ttgctctaaaactt 239  Q
    ||||||| ||||||    
T  20078819 ttgctctgaaactt 20078832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 46381180 - 46381079
Alignment:
Q  110 taacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 209  Q
    ||||||| ||| ||| |||| |||| |||||||||||| ||||||| || |||   |||| | ||||| ||| || |||||||||||||||| | |||||    
T  46381180 taacatggataaccagtttaaggaccatattaatcttcataactctcattcttcagttttagatcattgttagttattcttagtcaaaaatctggttttc 46381081  T
Q  210 gg 211  Q
    ||    
T  46381080 gg 46381079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 32600943 - 32601035
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    ||||| |||||||| ||  ||| ||||||||||||||| || |||||  ||||||||||   || ||||||| |||| |||||||| ||||||    
T  32600943 agttcagattatatgatatgaattgtatcagcacaaattctgaacatgcttgtaacatggccagtcattttaaggaccatattaatattccta 32601035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 1e-60; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 20891623 - 20891855
Alignment:
Q  9 attacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 107  Q
    |||||||||||| ||||||||| ||||||||||||| |||||        |||||||||||||||||| ||| ||||||||||||||| |||||||| ||    
T  20891623 attacataatccgaaaaccccctaaacaccctttttcaaggtaaaac---agttcggattatataatctgaactgtatcagcacaaattctaaacatgtt 20891719  T
Q  108 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 207  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||| | |||||||| ||| |||| | |||||||||||||||||| |||    
T  20891720 tgtaacatggatagtcattttagggataatattaatcttcctaactctcatccttctgttttgggttattgttacctattcttagtcaaaaatcgggttt 20891819  T
Q  208 tcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || |||||||||||||||||||||  ||||||||||    
T  20891820 tcaggctacttgatcggattgctccgaaacttcccc 20891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 7884250 - 7884435
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| ||||||||||| ||| ||||||| ||||||| ||||| || ||||||| |||||| | ||||||||||||||||||||||||||||||||| |    
T  7884250 agttcgaattatataatctgaactgtatcaacacaaattctaaatatgtttgtaatatgtattgtcattttagggacaatattaatcttcctaactctca 7884349  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  7884350 tccttctgttttgggtcattgttacatgttcttagtcaagaatcggattttcgggctacttgatcggattgctccgaaacttcccc 7884435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 38871728 - 38871901
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||| |    
T  38871728 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaataataatcttcctaactctca 38871827  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||||||||||| |||| |||||||||||||||||||| ||||| | |||||| ||||||||||||    
T  38871828 tccttctgttttgggtcattgttacctgttcttagtcaaaaatcgggttttcagactacttaatcggattgctc 38871901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 4064832 - 4064598
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||        |||||| ||||||||||||||| | ||||||||||||| |||||||| |    
T  4064832 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaac---agttcgaattatataatccgaactttatcagcacaaattctaaacatgt 4064736  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta-ttttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||| | |||||| || |||||||||||| |||| ||||||||||||||||||| ||    
T  4064735 ttgtaacatggatagtcattttagggacaatgttaatcttcctaactatcatccttctatttttgggtcattgttacctgttcttagtcaaaaatcgaat 4064636  T
Q  206 tttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||| |||||||||  ||||||||||    
T  4064635 tttcgggctacttgattggattgctccgaaacttcccc 4064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 32842035 - 32841861
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactctt 156  Q
    ||||||||||||||||| |||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||     
T  32842035 agttcggattatataattcgaattgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagggaacaatattaatcttcctaactctc 32841936  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||| ||||||| |||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32841935 atccttctattttgagtcattgttacatgttcgtagtcaaaaatcgggttttcgggctacttgatcggattgctc 32841861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 31221403 - 31221218
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  31221403 agttcggattatataatccaaactgtatcagcacaaattataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 31221304  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || || | |||||||||||| |||| |||||||||| |||||  || |||||||||||||||||||||||||||  ||||||||||    
T  31221303 tctttctgttttgggtcattgttacatgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttcccc 31221218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 39524833 - 39525006
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| |    
T  39524833 agttcggattatataatccgaactgtatcatcacaaattctaaacatatttgtaatatgtatagtcattttaggaacaatattaatcttcctaactctca 39524932  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||||||||||| |||||||||||||||| ||||| || ||||||  |||||||||| ||||||||    
T  39524933 tccttctgttttgggtcattgttacttgttcttagtccaaaattgggttttcgaactacttgatcagattgctc 39525006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 12465154 - 12464998
Alignment:
Q  87 agcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgt 186  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||    
T  12465154 agcacaaatcctaaacatatttgtaatatgtatagttattttagggacaatattaatcttcataactcttatccttttgttttggatcattgttacttgt 12465055  T
Q  187 tcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||| ||||| ||||    
T  12465054 tcttagtcaaaaatcgggttttcagactacttgatcggattgctctgaaactacccc 12464998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 33487667 - 33487853
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  33487667 agttcggattatataatccgaactgtatcagcacaaattctaaaaatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 33487766  T
Q  158 tcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||    |||||||||||| |||| |||||||||||||||||||  |||||||||||||||||||  ||||||  ||||||||||    
T  33487767 tccttcagtttttgggtcattgttacatgttcttagtcaaaaatcgagttttcgggctacttgatcgatttgctccgaaacttcccc 33487853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 6156789 - 6156961
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 158  Q
    |||||||||||||||| |||| |||||||||| |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||    
T  6156789 gttcggattatataatacgaattgtatcagcataaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcat 6156888  T
Q  159 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||| | |||| ||||||| |||| |||||||||| ||||| ||| |||| ||||||||||||||||||||||    
T  6156889 ccttctgtttttggtcattgttacatgttcttagttaaaaaccgggtttttgggctacttgatcggattgctc 6156961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 63 - 231
Target Start/End: Complemental strand, 37183840 - 37183672
Alignment:
Q  63 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||||||||| ||| ||||||| ||||||| ||||| || ||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||| ||    
T  37183840 ggattatataatctgaactgtatcaacacaaattctaaatatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactctcatcttt 37183741  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    || |||||||||||| ||||||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  37183740 ttgttttgggtcattgttacttgttcttagtcaaaaatcgggttttcagactacttgatcggattgctc 37183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 38692894 - 38692662
Alignment:
Q  8 gattacataatccaaaaacccccaaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatt 107  Q
    |||||||||||||  ||||||| ||||||||||||| |||||        |||||||||||||||||||||| ||||||||||||||| |||||||| ||    
T  38692894 gattacataatccggaaacccctaaacaccctttttcaaggtaaaac---agttcggattatataatccgaactgtatcagcacaaattctaaacatgtt 38692798  T
Q  108 tgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 207  Q
    ||||||||| |||  ||||||| ||||||||||||| ||| ||||||| ||| || | |||||||||||| ||||   |||||||||||||||||| |||    
T  38692797 tgtaacatggataatcattttaaggacaatattaatattcataactctcatctttctgttttgggtcattgttacccattcttagtcaaaaatcgggttt 38692698  T
Q  208 tcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||| ||||||| |||||||||||  ||||||||||    
T  38692697 tcggactacttggtcggattgctccgaaacttcccc 38692662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 15957806 - 15957991
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||| ||||||||||||| ||| |||||||| |||||| |||||||| ||||||||||  ||||  ||||||||||||||||||||||||||||||||      
T  15957806 agtttggattatataatctgaactgtatcagtacaaattctaaacatgtttgtaacatagatagtaattttagggacaatattaatcttcctaactctgg 15957905  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | ||||| |||||||||||| |||| |||||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||    
T  15957906 ttcttttgttttgggtcattattacctgttcttagtcaaaaatcaggttttcggactacttgatcggattgctccgaaacttcccc 15957991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 31929188 - 31929004
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||||| |    
T  31929188 agttcggattatataatctgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagg-acaatattaatcttcctaactctca 31929090  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | ||||| |||||| |||| |||||||||| ||||| | | |||||||||||||||||||||||||||  ||||||||||    
T  31929089 tccttctgttttgagtcattgttacctgttcttagttaaaaaccaggttttcgggctacttgatcggattgctccgaaacttcccc 31929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 64 - 231
Target Start/End: Original strand, 15799288 - 15799455
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||| ||||||||||| ||||||||| ||  ||||||     
T  15799288 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttatggacaatattattcttcctaattcgcatccttc 15799387  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | |||||||||||| |||| |||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  15799388 tgttttgggtcattgttacatgttcttagtcaaaaatcgggtttccgggctacttgaccggattgctc 15799455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 28083438 - 28083269
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| | |||||    
T  28083438 cggattatataatccgaactgtatcagcacaaattataaacatatttgtaacatggatagtcattttagggacaatattaatctttctaactttcatcct 28083339  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | | |||| ||||||| |||| |||||||||  ||||||||  ||||||| |||||||||||||||||||    
T  28083338 tctgtttttggtcattgttacctgttcttaggaaaaaatcgagttttcggactacttgatcggattgctc 28083269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 58 - 242
Target Start/End: Original strand, 29862669 - 29862854
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| | |    
T  29862669 agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttca 29862768  T
Q  158 tcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||    |||||||||||| |||| ||||||||||||||||||   |||||||||||||||||  ||||||||  |||||||||    
T  29862769 tccttccgtttttgggtcattattacctgttcttagtcaaaaatcaagttttcgggctacttgatgtgattgctccgaaacttccc 29862854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 78 - 243
Target Start/End: Original strand, 14111944 - 14112107
Alignment:
Q  78 aagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 177  Q
    ||||||||||||||||||  |||| || ||||||||||| |||| ||||||||||||||||||||||||||||||| | ||||  ||||||||||| |||    
T  14111944 aagtgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactttcatcc--ttattttgggttatt 14112041  T
Q  178 cttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
     ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||  ||||||||||    
T  14112042 gttacttgttcttagtcaaaaatcgggttttcggactacttgataggattgctccgaaacttcccc 14112107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 26190410 - 26190263
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||| || |||||||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26190410 gattacataattcagaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatccgaactgtatcagcacaaatcctaaacatat 26190314  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||||||||| ||| ||| ||||| |||||||||||||    
T  26190313 ttgtaacatgtatagccattttaaggataattttaatattcctaactctta 26190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 24203796 - 24203564
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||||| |||        ||||||| |||||||||||||| |||||||||| |||| |||||||| |    
T  24203796 gattacataatccggaaaccccctaaacacccttttttagggtaaaac---agttcgggttatataatccgaactgtatcagcataaattctaaacatgt 24203700  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||  | |||  ||||||| ||||||||||||| ||||||||||| | |||| | |||||| ||||| |||| |||||||||| |||||| |  ||    
T  24203699 ttgtaactgggataatcattttaaggacaatattaatgttcctaactctcaaccttctgttttggatcattgttacctgttcttagttaaaaattgagtt 24203600  T
Q  207 ttcgggctacttgatcggattgctctaaaacttccc 242  Q
    ||||||||| |||||||||||||||  |||||||||    
T  24203599 ttcgggctatttgatcggattgctccgaaacttccc 24203564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 38372366 - 38372543
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||| ||||| |||| ||||||||||||||||||||||||||||||||| |    
T  38372366 agttcagattatataatccgaactgtattagcacaaattctaaacatgtttgttacatggatagtcattttagggacaatattaatcttcctaactctca 38372465  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |  ||         |||||| |||| |||||||||| |||||| || |||||||||||||||||||||| ||||  ||||||||||    
T  38372466 taatt--------cgtcattgttacatgttcttagttaaaaattgggttttcgggctacttgatcggatcgctccgaaacttcccc 38372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 26095148 - 26095334
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||| ||| ||||||| || |||| |||||||| ||||||||||| |||| ||| ||| ||||||||||||||||| |||||||     
T  26095148 tagttcggattatataatctgaattgtatcaacataaattctaaacatgtttgtaacatggatagtcatattatggacaatattaatcttcttaactctc 26095247  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || ||| ||||||| |||||| ||   |||| | ||| ||||||||| |||| |||||||||| || ||||||||  ||||||||||    
T  26095248 attcttctattttgtgtcattgttggctgttttcagtaaaaaatcgggtttttgggctacttgttcagattgctccgaaacttcccc 26095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 40620048 - 40619865
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat-cctt 162  Q
    |||||||||||||||| |||||||| |||||| ||||||||  |||||||||| | |  ||||||||||||||||||||||||||||||||| || ||||    
T  40620048 gattatataatccgaattgtatcagtacaaattctaaacatgcttgtaacatggacaatcattttagggacaatattaatcttcctaactctcatccctt 40619949  T
Q  163 ttattttgggtcattcttacttgttc----ttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
     | |||||||||||| |||| |||||    ||||||||||||||| ||| ||| ||||||| |||||||| ||  |||||||||    
T  40619948 ctgttttgggtcattgttacctgttcttaattagtcaaaaatcgggtttccggactacttggtcggattgttccgaaacttccc 40619865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 12847500 - 12847685
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||| ||| |||||||||| ||||||||||||||| || ||||| ||||||||||  |||  ||||||| |||||||||||||||||| ||||||      
T  12847500 agttcggtttaaataatccgaactgtatcagcacaaattctgaacatgtttgtaacatagataatcattttatggacaatattaatcttcccaactctcg 12847599  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |  || | |||||| ||||| |||  |||||||||||||||||||  ||||||||||||||||||  ||| |||| ||||||||||    
T  12847600 tatttctgttttggatcattgttagctgttcttagtcaaaaatcgagttttcgggctacttgatcatattactctgaaacttcccc 12847685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 13908605 - 13908778
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||| || ||||  ||||||| ||||||||| | |||| ||||||| ||||||||||||||||| ||||  | |    
T  13908605 agttcggattatataatccgaattgtatcaacataaattttaaacatgtttgtaacacggatagtcattttatggacaatattaatcttcttaaccttca 13908704  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | ||||| |||||| |||  ||||||| |||||||||| | ||||| | |||||||||||||||||||    
T  13908705 tccttctcttttgagtcattgttagctgttctttgtcaaaaatcaggttttcagactacttgatcggattgctc 13908778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 23269391 - 23269579
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagca---caaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 154  Q
    ||||| |||||||||||||||| | ||||| ||   ||| | || ||||| ||||||||||| | |  ||||||| ||||||||||||||||||||||||    
T  23269391 agttcagattatataatccgaactttatcatcatcacaacttctgaacatgtttgtaacatgaacaatcattttaaggacaatattaatcttcctaactc 23269490  T
Q  155 ttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | || ||| |||| ||||| ||  |||  |||||||| ||||||||||| ||||||||||||||||||||||||||   ||||||||||    
T  23269491 tcattcttctattctgggttatagttagatgttcttattcaaaaatcgggttttcgggctacttgatcggattgcttcgaaacttcccc 23269579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 27212766 - 27212934
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| |||| | |||||| ||||||  ||||||| ||||||||||  |||| |||     | ||||||||||||||||||||||| |    
T  27212766 agttcggattatataattcgaactatatcagtacaaattataaacatgtttgtaacatagatagtcat-----gaacaatattaatcttcctaactctca 27212860  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| |  |||| |||||| |||| |||||||||||||||||||| ||||||| ||| ||||| |||||||||    
T  27212861 tccttctggtttgagtcattgttacctgttcttagtcaaaaatcgggttttcggactatttgattggattgctc 27212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 25747082 - 25747168
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatc 144  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||| |||||||    
T  25747082 agttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaacattaatc 25747168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 27158144 - 27158314
Alignment:
Q  61 tcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcc 160  Q
    ||||||||||||||| ||| |||||||||||||||  | ||||| |||| |||||| |||| ||||||| |||||||||||| ||||||||  || ||||    
T  27158144 tcggattatataatctgaactgtatcagcacaaattatgaacatgtttgaaacatggatagtcattttaaggacaatattaagcttcctaatcctcatcc 27158243  T
Q  161 ttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||   |||||||||||| ||| ||||| ||| | ||||||  | ||||| |||||||||||| ||||||||    
T  27158244 ttcacttttgggtcattattagttgttattaataaaaaattcggttttcaggctacttgatcagattgctc 27158314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 26898790 - 26898694
Alignment:
Q  135 aatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||||||||||||||||||| |||||| | ||||| |||||| |||  |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26898790 aatattaatcttcctaactctcatccttctgttttgagtcattgttatatgttcttagtcaaaaatcgagttttcgggctacttgatcggattgctc 26898694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 40613739 - 40613556
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||| |||| ||||  | ||||| ||||||||||| |||   |||||| ||||| ||||||||||||||||| | |    
T  40613739 agttcggattatataatccgaactgtatgagcaaaaattatgaacatgtttgtaacatggataattattttaaggacattattaatcttcctaactttca 40613640  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||| | | || |||||||  ||  |||||||||| |||||||   |||| | ||||||||||| ||||||||  ||||||||    
T  40613639 tccttatgtattaggtcattgctaactgttcttagttaaaaatccagtttttgagctacttgatcagattgctccgaaacttcc 40613556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 41639557 - 41639385
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||| ||||||||||||||||| ||||||||||||||| || |   | ||||||||||  ||| ||| ||||  |||||||||||| | ||||||||| |    
T  41639557 agtttggattatataatccgaactgtatcagcacaaattctgagtctgtttgtaacatagataaccagtttaatgacaatattaatttccctaactctca 41639458  T
Q  158 tccttttattttgggtcattcttacttgttcttagt---caaaaatcggattttcgggctacttgatcggatt 227  Q
    || |||| |||| ||||||| ||| |||||||||||    ||||||| ||||||| |||||||||||| ||||    
T  41639457 tctttttgttttaggtcattgttagttgttcttagtaaaaaaaaatctgattttcaggctacttgatcagatt 41639385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 169
Target Start/End: Original strand, 21070429 - 21070534
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    ||||||||||||| || || ||||| |||||| || ||||||||||||||||  |||| ||||||| ||||||||||||||||| |||| || |||| ||    
T  21070429 gattatataatccaaactgaatcagtacaaattctgaacatatttgtaacatagatagtcattttaaggacaatattaatcttcataaccctcatccatt 21070528  T
Q  164 tatttt 169  Q
    ||||||    
T  21070529 tatttt 21070534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 8739050 - 8738938
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||||||||| ||||||| || || |||| ||| ||| || ||||| ||||||||||| |||| ||||||| | |||||||||||||||||||||||     
T  8739050 tagttcggattacataatccaaactgcatcaacaccaattctgaacatgtttgtaacatggatagtcattttaagaacaatattaatcttcctaactctc 8738951  T
Q  157 atccttttatttt 169  Q
    |||| | ||||||    
T  8738950 atccctgtatttt 8738938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 6800984 - 6800818
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||  ||| |||||||||| ||||  | ||||| |||| |||||| | || ||||||| |||||||  |||||||||| | ||| |||||| |    
T  6800984 attatataatttgaactgtatcagcataaattatgaacatgtttgcaacatggacagtcattttaaggacaatgctaatcttcctcattctcatccttct 6800885  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     |||| ||||||| |||  |||||||||||||||||| | ||||||  ||||||||||  |||||||    
T  6800884 gttttaggtcattgttagatgttcttagtcaaaaatccggttttcgaactacttgatcatattgctc 6800818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 26190267 - 26190201
Alignment:
Q  177 tcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||| |||||||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  26190267 tcttacctgttcttagtcaaaaatcgggttttcggactactagatcggattgctctgaaacttcccc 26190201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 152
Target Start/End: Complemental strand, 27494217 - 27494123
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaac 152  Q
    |||||||||||  | |||| || || | |||||| ||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  27494217 agttcggattacgtgatccaaactgcaccagcaccaattctaaacatatttgtaacatggatagtcattttaaggacaatattaatcttcctaac 27494123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 242
Target Start/End: Original strand, 33901094 - 33901200
Alignment:
Q  136 atattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaa 235  Q
    ||||||||||||||||||| ||||||| | |||| ||||||| ||| ||||| ||||||||||||  ||||||| | ||| |||||| ||||||||  ||    
T  33901094 atattaatcttcctaactcatatccttctcttttaggtcattgttagttgtttttagtcaaaaatttgattttcagactatttgatcagattgctccgaa 33901193  T
Q  236 acttccc 242  Q
    |||||||    
T  33901194 acttccc 33901200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 16429339 - 16429443
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||  |||||| || |  |||||||| ||| || ||||| ||||||||||| |||| | ||||| |||||||||||||||||| ||||||||    
T  16429339 agttcggattacctaatccaaactacatcagcaccaattctgaacatgtttgtaacatgaatagtcgttttaaggacaatattaatcttccaaactctta 16429438  T
Q  158 tcctt 162  Q
    |||||    
T  16429439 tcctt 16429443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 26093502 - 26093618
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||| ||||||||||||| || | |||||||| ||||  | ||||| ||| ||||||| |||| ||||||| |||||| |||||||||| |||||||     
T  26093502 tagttcagattatataatcctaactatatcagcataaattatgaacatgtttctaacatggatagtcattttatggacaaaattaatcttcttaactctc 26093601  T
Q  157 atccttttattttgggt 173  Q
    |||||| | ||||||||    
T  26093602 atccttctgttttgggt 26093618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 241
Target Start/End: Original strand, 26622170 - 26622350
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||||||||| |||| |||||||||||||||    ||  | ||||||||||   || |||  ||| |||| ||||||| |||||||||| | |    
T  26622170 agttcggattatataattcgaactgtatcagcacaaatttcgaatttgtttgtaacatag-taaccagattaaggaccatattaaacttcctaactttca 26622268  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||| |||||| ||| ||| ||| |||||  |||||||||||| | ||||||| |||||||||| ||||||||  ||||||||    
T  26622269 tccttctattttaggttattgttagttgtt--tagtcaaaaatccggttttcggactacttgatcagattgctccgaaacttcc 26622350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 8739250 - 8739148
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||  |||||| || || | |||||| ||| || ||||| |||||||||||  ||| ||||||| ||||||||||||||||||||||||| |||    
T  8739250 ttcggattacgtaatccaaactgcaccagcaccaattctgaacatgtttgtaacatgggtagtcattttaaggacaatattaatcttcctaactctcatc 8739151  T
Q  160 ctt 162  Q
    |||    
T  8739150 ctt 8739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 1350374 - 1350290
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaa 142  Q
    ||||||||||||||||| | || | ||||| ||||||| |||||||| ||||||||||| ||| |||||||| ||| ||||||||    
T  1350374 agttcggattatataattcaaactatatcaacacaaattctaaacatgtttgtaacatggataaccattttatggataatattaa 1350290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 41253359 - 41253530
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    ||||||||||||||| |||| |||| |||||| |||  | ||| | ||||||||||| ||| | | |||| | || |||||||||||||||||| | |||    
T  41253359 ttcggattatataattcgaactgtaccagcaccaattatgaacttgtttgtaacatgaataacgaatttaagtaccatattaatcttcctaactatcatc 41253458  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||  | |||| ||||||| ||| |||||| || | |||||||  | || ||||| |||||||| ||||||||    
T  41253459 ctcctgttttaggtcattgttagttgttcctaataaaaaatccaaattccgggccacttgatcagattgctc 41253530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 28445231 - 28445169
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| |||||||||||||| | | ||||| ||||||||||||||||||||||||| ||||||    
T  28445231 aacatgtttgtaacatgtatggtcgttttaaggacaatattaatcttcctaactctcatcctt 28445169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 7036677 - 7036758
Alignment:
Q  140 taatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 221  Q
    ||||||||||||||||||||||| ||| || ||||||| ||  ||||||  ||| ||||||| ||||||||||||| |||||    
T  7036677 taatcttcctaactcttatccttctatattaggtcattgttggttgttcacagttaaaaatctgattttcgggctatttgat 7036758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 34530300 - 34530367
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaact 153  Q
    |||||| ||| || ||||| |||||||||||  ||| ||||||| |||||||||||||||||||||||    
T  34530300 cagcactaattctgaacatgtttgtaacatggttagtcattttaaggacaatattaatcttcctaact 34530367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 8973631 - 8973569
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| ||||||||||| |||  ||||||| |||||||||||| |||||||||||| ||||||    
T  8973631 aacatgtttgtaacatggataatcattttaaggacaatattaaccttcctaactctcatcctt 8973569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 200
Target Start/End: Complemental strand, 11186234 - 11186097
Alignment:
Q  63 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||||||||||||| |||||||||| |||| || |   ||||||||||||| ||| ||  ||||  ||| |||||||| ||| | ||||| ||||||    
T  11186234 ggattatataatccgaactgtatcagcataaattctgagtctatttgtaacatggataaccgatttaatgaccatattaattttcttgactctcatcctt 11186135  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaat 200  Q
     | |||| ||| ||| |||  |||||||||| ||||||    
T  11186134 ctgttttaggtaattgttagatgttcttagtaaaaaat 11186097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 16429168 - 16429240
Alignment:
Q  97 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatttt 169  Q
    |||||||| ||||||||||| |||| |||||||  || |||| |||||||| ||||||| |||||| ||||||    
T  16429168 ctaaacatgtttgtaacatggatagtcattttaatgataatactaatcttcataactctcatccttgtatttt 16429240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 28445441 - 28445381
Alignment:
Q  86 cagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatctt 146  Q
    |||||| ||| || ||||| ||||||||||| |||| ||||||| ||||||||||||||||    
T  28445441 cagcacgaattctgaacatgtttgtaacatggatagtcattttaaggacaatattaatctt 28445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 38641033 - 38641083
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttccta 150  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||    
T  38641033 aacatgtttgtaacatagatagtcattttaaggacaatattaatcttccta 38641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 6e-60; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 32187928 - 32187743
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| |||||||||||||||  |||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  32187928 agttcggattatataatccgaactgtatcagcacaaattttaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 32187829  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||| ||||||| |||||||||||| ||||||| |||||||||||||||||||  ||||||||||    
T  32187828 tccttctgttttgggtcattgttacctgttcttggtcaaaaatcgggttttcggactacttgatcggattgctccgaaacttcccc 32187743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 36949005 - 36948851
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||| |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  36949005 tagtttggattatataatccaaactgtatcagcacaaatcctaaacatatttataacatgtatagctattttagggacaatattaatcttcctaactctt 36948906  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 211  Q
    |||||||| |||||||| ||| |||| ||||||||||||||||| || |||||||    
T  36948905 atccttttgttttgggtaattgttacctgttcttagtcaaaaattgggttttcgg 36948851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 39447256 - 39447441
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||||||||||||||| | || ||||||||||||||| |||||||| ||||||||||| |||| |||||||  ||||||||||||||||||||||||     
T  39447256 tagttcggattatataattcaaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttaaagacaatattaatcttcctaactctc 39447355  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||| | ||| | || ||||||||||||||||| |||||||||    
T  39447356 atccttctattttgggtcattgttacatgttcttagtcaaaaatcgggtcttccgactgcttgatcggattgctctgaaacttccc 39447441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 62 - 242
Target Start/End: Complemental strand, 41510483 - 41510304
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    |||||||||||||| ||| ||||||||||||| | |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  41510483 cggattatataatctgaactgtatcagcacaatttctaaacatgtttgtaacatg-atagtcattttagggacaatattaatcttcctaactctcatcct 41510385  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    | | |||||||||||| ||||||||||||||| |||||  || |||||||||||||||||||||||||||  |||||||||    
T  41510384 tctgttttgggtcattgttacttgttcttagttaaaaactgggttttcgggctacttgatcggattgctccgaaacttccc 41510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 41203245 - 41203060
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| |||||||||| ||||| |||||||||||||||  ||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| | |    
T  41203245 agttcagattatataaaccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttatggacaatattaatcttcctaactttca 41203146  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||| |||||||||| |||||| |||||||||||| |||||||||||||||||  ||||||||||    
T  41203145 tccttctgttttgggtcattgttacctgttcttagttaaaaattggattttcgggcaacttgatcggattgctccgaaacttcccc 41203060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 33452502 - 33452329
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| |    
T  33452502 agttcggattatataatccgaactgtattagcacaaattctaaacatgtttgtaacatggataatcattttagggacaatattaatcttcctaactctca 33452403  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | ||||| ||||||||| || |||  |||||||||||||||||||| |||  || |||||||||||||||||||    
T  33452402 ttcttttgttttgggtctttgttatctgttcttagtcaaaaatcgggtttctggactacttgatcggattgctc 33452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 15995220 - 15994987
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    ||||||||||||| ||||||||| ||||||||||||| ||| |        ||||||||||||||||| |||| |||||||||| |||| |||||||| |    
T  15995220 gattacataatccgaaaaccccctaaacaccctttttcaagctaaaac---agttcggattatataattcgaactgtatcagcaaaaattctaaacatgt 15995124  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||| |||||||||||||||| |||||||| ||| || | |||||||||||| |||| |||||||||| |||||| |||||    
T  15995123 ttgtaacatggatagtcattttatggacaatattaatctttctaactctcatcattctgttttgggtcattgttacatgttcttagtaaaaaattggatt 15995024  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | ||| |||||||||||||||  ||||||||||    
T  15995023 ttcagactatttgatcggattgctccgaaacttcccc 15994987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 57 - 243
Target Start/End: Original strand, 5507513 - 5507699
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| |||||||   |||||||||||||||  ||||||     
T  5507513 tagttcggattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttataaacaatattaatcttcacaactctc 5507612  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || ||| | ||||||||||||  ||| |||||||||||||||||| | ||||||||| |||||||||||||||||  ||||||||||    
T  5507613 attcttctgttttgggtcattgctacctgttcttagtcaaaaatcaggttttcgggcaacttgatcggattgctccgaaacttcccc 5507699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 42894476 - 42894657
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    ||||||||||| |||||| ||||||||||||||| |||||||| ||| ||||||| |||  |||||||||||||||||||||||||||||||||  ||||    
T  42894476 cggattatatattccgaactgtatcagcacaaattctaaacatgtttctaacatggataatcattttagggacaatattaatcttcctaactctcttcct 42894575  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    | | |||||||||||| |||| ||||||||| |||||||||  ||||||| ||||||||||||||| |||  ||||||||||    
T  42894576 tctgttttgggtcattgttacatgttcttaggcaaaaatcgagttttcggactacttgatcggattactccgaaacttcccc 42894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 58 - 211
Target Start/End: Complemental strand, 44465786 - 44465633
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||  ||| ||||||||||||||||||||||||||||||||| |    
T  44465786 agttcggattatataatccgaaatgtatcagcacaaattctaaacatgtttgtaacatggttagtcattttagggacaatattaatcttcctaactctca 44465687  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgg 211  Q
    ||||| | |||||||||||| |||| | |||||||||||||||| | |||||||    
T  44465686 tccttctgttttgggtcattgttacctcttcttagtcaaaaatcaggttttcgg 44465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 41854958 - 41854778
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||  ||| ||||||||||||||| |||||||| |||||||     |||| ||||| ||||||||||||||||||||||||||| |    
T  41854958 agttcggattatataatttgaactgtatcagcacaaattctaaacatgtttgtaa-----atagtcatttcagggacaatattaatcttcctaactctca 41854864  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | ||||| |||||| |||  |||||||||| ||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  41854863 tccttctgttttgagtcattgttatctgttcttagttaaaaaccggatttttgggctacttgatcggattgctctgaaacttcccc 41854778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 34517196 - 34517369
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||| |  |||||||| |||| ||||||| | |||||||||||| || ||||| | |    
T  34517196 agtttggattatataatccgaactgtatcagcacaaattctaaacatgtcggtaacatggatagtcattttatgaacaatattaatcatcataactttca 34517295  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||||| |||||||||||| |||| ||||||||||||||||| || |||||||  ||||||||||||||||||    
T  34517296 tccttttgttttgggtcattgttacctgttcttagtcaaaaattgggttttcggaatacttgatcggattgctc 34517369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 64 - 240
Target Start/End: Complemental strand, 19110068 - 19109892
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    ||||||||||||| || | |||||||||||||  |||| || ||||||||||| || | ||||||| ||| ||||||||||||||||||||| |||||||    
T  19110068 gattatataatccaaactatatcagcacaaattttaaatatctttgtaacatggatcgtcattttaaggataatattaatcttcctaactctcatccttt 19109969  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 240  Q
    |||||||||||||| |||  ||||||||||||||||||   |||| || |||||||||||||||||||  |||||||    
T  19109968 tattttgggtcattgttagctgttcttagtcaaaaatccagtttttggactacttgatcggattgctccgaaacttc 19109892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 59 - 228
Target Start/End: Complemental strand, 16750485 - 16750318
Alignment:
Q  59 gttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttat 158  Q
    |||||||||||||||| |||| |||||||||| |||| ||||  || ||||||| ||| |||| ||||||||| ||||||||||||||| ||||||| ||    
T  16750485 gttcggattatataattcgaactgtatcagcataaattctaat-atgtttgtaatatggatagtcattttaggaacaatattaatcttc-taactctcat 16750388  T
Q  159 ccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattg 228  Q
    |||| | |||||||||||| |||  |||||||||| ||||||||||||||||| ||||||||||||||||    
T  16750387 ccttctgttttgggtcattgttatctgttcttagtaaaaaatcggattttcggactacttgatcggattg 16750318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 68 - 231
Target Start/End: Complemental strand, 25217825 - 25217660
Alignment:
Q  68 atataatccg-aagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttat 166  Q
    |||||||||| || ||||| ||||||||| |||||||| |||||| |||| |||| |||||| |||||||| |||||||||||||||||  ||||| | |    
T  25217825 atataatccggaactgtattagcacaaattctaaacatgtttgtagcatggatagtcattttggggacaattttaatcttcctaactctcttccttctgt 25217726  T
Q  167 ttt-gggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||| |||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||||    
T  25217725 ttttgggtcattgttacctgttcttagtaaaaaatcgggttttcgggctacttgatcggattgctc 25217660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 36875084 - 36875253
Alignment:
Q  62 cggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcct 161  Q
    ||||||||||||||| || ||||| |||| |||| |||||||  ||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||    
T  36875084 cggattatataatccaaactgtattagcataaattctaaacaagtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatcct 36875183  T
Q  162 tttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    | | |||||||||||| ||||  |||||||| |||||||||| ||||| | |||||| |||| |||||||    
T  36875184 tctgttttgggtcattgttacccgttcttaggcaaaaatcgggttttcagactacttaatcgaattgctc 36875253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 8388746 - 8388909
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| ||||||||| |||||| ||||||||||||||| ||||| || ||||||||||| || ||||| ||| ||||||||||||||||||||||||| |    
T  8388746 agttcagattatatagtccgaaatgtatcagcacaaattctaaagatgtttgtaacatggattgccatcttatggacaatattaatcttcctaactctca 8388845  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgat 221  Q
    |||||   |||||||||||| ||   ||||||||||| |||||||| |||||| ||||||||||    
T  8388846 tccttcagttttgggtcattgttggctgttcttagtctaaaatcgggttttcgagctacttgat 8388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 64 - 200
Target Start/End: Complemental strand, 45153844 - 45153708
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||  ||| ||||||||||||| |  ||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||     
T  45153844 gattatataatttgaactgtatcagcacaagttataaacatgtttgtaacatggatagtcattttagggacaatattaatcttcttaactctcatccttc 45153745  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaat 200  Q
    | |||||||||||| |||| ||||||||||| |||||    
T  45153744 tgttttgggtcattgttacctgttcttagtccaaaat 45153708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 17474858 - 17474707
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||| ||||||||||||||||| |||||||||||||||  ||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||||| |    
T  17474858 agtttggattatataatccgaactgtatcagcacaaattttaaacatgtttgtaacatggatagtcattttagagacaatattaatcttcctaactctca 17474759  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttc 209  Q
    |  || | || || | |||| |||| ||||||| |||||||||||| |||||    
T  17474758 taattctgttatgcggcattgttacctgttcttcgtcaaaaatcgggttttc 17474707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 65 - 231
Target Start/End: Original strand, 35251032 - 35251198
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    |||||||||||| || ||||| ||||||||| || |   | ||||||| ||| ||||||| |||| |||| |||||||||||| |||||| ||||||| |    
T  35251032 attatataatccaaactgtattagcacaaattctgagtttgtttgtaatatggatagccagtttaaggaccatattaatcttcttaactcctatccttct 35251131  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| ||||||| ||| |||||||||||| |||||| | |||||||||||||||||| ||||||||    
T  35251132 attttaggtcattgttagttgttcttagtcgaaaatccggttttcgggctacttgatcagattgctc 35251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 118 - 241
Target Start/End: Original strand, 30763804 - 30763927
Alignment:
Q  118 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 217  Q
    |||| ||||||| ||||||||||||||||||||||||| ||| || | |||| ||||||| |||  |||||||||||||||||| |||||| |||| |||    
T  30763804 atagtcattttatggacaatattaatcttcctaactctcatctttctgtttttggtcattgttagctgttcttagtcaaaaatctgatttttgggcaact 30763903  T
Q  218 tgatcggattgctctaaaacttcc 241  Q
    ||||||||||||||  ||||||||    
T  30763904 tgatcggattgctccgaaacttcc 30763927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 42478846 - 42479023
Alignment:
Q  66 ttatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttta 165  Q
    |||||||||| ||| |||||||||||||||  | |   ||||||||| ||  ||| ||| |||| |||| |||||||||||||||||||| |||||| |     
T  42478846 ttatataatctgaaatgtatcagcacaaattttgagtttatttgtaatatagataaccagtttaaggaccatattaatcttcctaactctcatccttatg 42478945  T
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||| ||||||| |||   ||||| ||||||||||    |||||||||||||||||| ||||||||| ||||||||||    
T  42478946 ttttaggtcattgttagccgttctcagtcaaaaattcagttttcgggctacttgatcagattgctctgaaacttcccc 42479023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 38308840 - 38308706
Alignment:
Q  110 taacatgtatagccattttagggacaatattaatcttccta--actcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattt 207  Q
    ||||||| || | ||||||| ||||||||||||||||| ||  ||| | |||||| | ||||||||| || |||| ||||||||||||||||||||  ||    
T  38308840 taacatggattgtcattttatggacaatattaatcttcttataactatcatccttctgttttgggtc-ttgttacctgttcttagtcaaaaatcgggatt 38308742  T
Q  208 tcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||| ||||||||| ||||||||||    
T  38308741 tcgggctacttgatcagattgctctgaaacttcccc 38308706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 65 - 239
Target Start/End: Original strand, 45293743 - 45293916
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||| ||| ||||||||||||||| || | | || || ||||||| ||| ||  |||| ||   |||||||||||||||||||| ||| || |    
T  45293743 attatataatctgaactgtatcagcacaaattctgatc-taattataacatggataaccggtttaagggtcatattaatcttcctaactctcatctttct 45293841  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
     |||| |||||||  || ||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||    
T  45293842 gttttaggtcattgctagttgttcttagtcaaaaatccggttttcgggctacttgatcatattgctctgaaactt 45293916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 227
Target Start/End: Original strand, 26228160 - 26228330
Alignment:
Q  57 tagttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctt 156  Q
    |||||||| ||||||||| |||| |||||||||| | ||  | ||  | ||||| ||||| ||| | | ||||  ||| ||||||||||| ||||||||     
T  26228160 tagttcgggttatataattcgaactgtatcagcatacattatgaatctgtttgtgacatggataactagtttaatgaccatattaatcttgctaactctc 26228259  T
Q  157 atccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
    |||||||| |||| ||| ||| ||| |||||||||||||||||||   |||||| ||||||||||| ||||    
T  26228260 atccttttgttttaggtaattgttagttgttcttagtcaaaaatctagttttcgagctacttgatcagatt 26228330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 37773827 - 37773700
Alignment:
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatc--gg 203  Q
    ||||||||||| ||||||| |||| |||| || |||||||| |||||||| |||||| | |||| | ||||| ||| |||||||||||||||| ||  |     
T  37773827 tttgtaacatggatagccagtttaaggactatgttaatctttctaactctcatccttctgttttagttcattgttagttgttcttagtcaaaagtccagt 37773728  T
Q  204 attttcgggctacttgatcggattgctct 232  Q
    ||||| ||||||||||||| |||||||||    
T  37773727 atttt-gggctacttgatcagattgctct 37773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 17766846 - 17766784
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||||||||||| ||||||    
T  17766846 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcctaactctcatcctt 17766784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 13704763 - 13704690
Alignment:
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |||| ||| ||| ||| ||||| | ||||||||||| |||||||||||||||||||| ||||||||| ||||||    
T  13704763 ttttaggttattgttagttgttttcagtcaaaaatccgattttcgggctacttgatcagattgctctgaaactt 13704690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 9847440 - 9847386
Alignment:
Q  97 ctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 151  Q
    ||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||    
T  9847440 ctaaacatatttgtaacgtcgatagtcattttaaggacaatattaatcttcctaa 9847386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 34519554 - 34519492
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| ||||||||||| |||  ||||||| ||||||||||||||||||||||| | ||||||    
T  34519554 aacatgtttgtaacatggataatcattttaaggacaatattaatcttcctaactttcatcctt 34519492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 34817219 - 34817377
Alignment:
Q  81 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 180  Q
    ||||||||||| ||| || ||| | ||||||||||| ||| ||| | || |||| |||||||||||||||||| | |||||  | |||| ||||||| ||    
T  34817219 tgtatcagcaccaattctgaacttgtttgtaacatggataaccaatgtaaggaccatattaatcttcctaactatcatcctcatgttttaggtcattgtt 34817318  T
Q  181 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    |  |||||   || |||||   ||  |||||||||||||||| ||||||||| ||||||    
T  34817319 agatgttccctgttaaaaaaacgaggttcgggctacttgatctgattgctctgaaactt 34817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 38066725 - 38066643
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttc 147  Q
    ||||||||| |||||  |||| | ||||||| ||||| || ||||||| ||| |||| ||||||| |||||||||||||||||    
T  38066725 attatataaaccgaacagtattaacacaaattctaaatatgtttgtaaaatggatagtcattttaaggacaatattaatcttc 38066643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 27670723 - 27670764
Alignment:
Q  190 tagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||||||||||| ||||||| |||||||||||||||||||    
T  27670723 tagtcaaaaatcgggttttcggactacttgatcggattgctc 27670764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 231
Target Start/End: Complemental strand, 38065528 - 38065463
Alignment:
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    |||||||| ||| |||| |||||||||| ||||||  ||||||| ||||| |||||||||||||||    
T  38065528 ttttgggttattgttacctgttcttagtaaaaaattagattttcaggctatttgatcggattgctc 38065463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 9847229 - 9847167
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||||||||| ||||| | ||||||    
T  9847229 aacatgtttgtaacattgatagtcattttaaggacaatattaatcttcataactttcatcctt 9847167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 177
Target Start/End: Complemental strand, 33440545 - 33440450
Alignment:
Q  81 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcatt 177  Q
    ||||||| ||||||| || ||||| ||||| ||||| | |  ||||||| ||| |||||||||||| ||||| || |||||| | ||||||||||||    
T  33440545 tgtatcaacacaaattctgaacatgtttgttacatgaaaattcattttaaggataatattaatctttctaac-ctcatccttctgttttgggtcatt 33440450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 9e-59; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 4508366 - 4508183
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||| | |    
T  4508366 agttcggattatataatctgaactgtatcagcacaaattctaaacatgtttgtaatatggatagtcattttagggacaatattaatcttcctaactttca 4508267  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||| | |||||||||||| |||| |||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||    
T  4508266 tccttctgttttgggtcattgttacatgttcttagtcaaaaatcgggttttcgggctacttgattggattgctccgaaacttcc 4508183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 5638957 - 5639138
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||| | |||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  5638957 agttcggattatataatccgaactgtatcagcacatatcataaacatgtctgtaacatatatagccattctagggacaatattaatcttcttaactctta 5639056  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    ||||||| ||||| |||||| |||| |||||||| ||||||||||| ||| ||||||||||| || ||||||||| ||||||    
T  5639057 tccttttgttttgagtcattgttacctgttcttaatcaaaaatcgggtttccgggctacttggtcagattgctctgaaactt 5639138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 58 - 243
Target Start/End: Original strand, 23406891 - 23407077
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  23406891 agttcgaattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 23406990  T
Q  158 tcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||    |||||||||||| |||||||||||||||||||||||   |||||||||||||||||  ||||||||  ||||||||||    
T  23406991 tccttccgtttttgggtcattattacttgttcttagtcaaaaatcaagttttcgggctacttgatttgattgctccgaaacttcccc 23407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 2813280 - 2813103
Alignment:
Q  67 tatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt-tta 165  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||||| |||| ||||||| ||| ||||||||||||||||||||| ||||||        
T  2813280 tatataatccgaactgtatcaccacaaattctaaacatatttttaacatgaatagtcattttatggataatattaatcttcctaactctcatccttccgt 2813181  T
Q  166 ttttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  2813180 ttttgggtcattgttacctgttcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttcccc 2813103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 3717347 - 3717173
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||||| | ||||||||| |||| ||||||||||||||||||||| || |||||||| |    
T  3717347 agttcggattatataatccgaactgtatcatcacaaattctaaacatgtctgtaacatggatagtcattttagggacaatattaatttttctaactctca 3717248  T
Q  158 tcctt-ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| |  |||||||||||| |||| |||||||||||||||||||| ||||| | |||||||||||||||||||    
T  3717247 tccttctgtttttgggtcattgttacatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctc 3717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 230
Target Start/End: Complemental strand, 14587672 - 14587452
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||        ||||||||||||||||||  || |||||| |||||||| |||||||| |    
T  14587672 gattacataatccataaaccccctaaacaccatttttcaaggtaaaac---agttcggattatataatcataactgtatcggcacaaattctaaacatgt 14587576  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | |||||||||||| |||| |||||||||| |||||  |||||    
T  14587575 ttgtaacatggatagtcattttacggacaatattaatcttcctaactctaatccttatgttttgggtcattgttacatgttcttagtaaaaaaatggatt 14587476  T
Q  207 ttcgggctacttgatcggattgct 230  Q
    || |||||||||||| ||||||||    
T  14587475 tttgggctacttgattggattgct 14587452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 17264457 - 17264690
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| ||||||||||||| |||||       ||||||||||||||||||| ||| ||||||||||||||| |||||||| |    
T  17264457 gattacataatccggaaaccccctaaacaccctttttcaaggtaaaa---tagttcggattatataatctgaactgtatcagcacaaattctaaacatgt 17264553  T
Q  107 ttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggatt 206  Q
    ||| ||||||  ||| |||||||||||||||||| |||||||||||||| |||||| | ||||| |||||| |||| |||||||||| |||||| |  ||    
T  17264554 ttgcaacatggttagtcattttagggacaatatttatcttcctaactctcatccttctgttttgcgtcattgttacctgttcttagttaaaaattgagtt 17264653  T
Q  207 ttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    || |||||||||||| |||||||||  ||||||||||    
T  17264654 tttgggctacttgatgggattgctccgaaacttcccc 17264690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 1945588 - 1945423
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| |||||| |||||||| |||||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||| ||||||     
T  1945588 gattatataatccgaactgtatcggcacaaattctaaacatgtttgtaacatggatagtcattttagggataatattaatcttcctaactctcatccttc 1945489  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgc 229  Q
    | ||||||| |||| |||| |||| ||| |||||||||||||||||||| || |||||||||||||    
T  1945488 tgttttgggacattgttacctgtttttattcaaaaatcggattttcgggttatttgatcggattgc 1945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 96 - 243
Target Start/End: Complemental strand, 21515057 - 21514910
Alignment:
Q  96 cctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtca 195  Q
    |||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| |  ||||||||||| |||| ||||||||||||    
T  21515057 cctaaatatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatccttctcctttgggtcattgttacctgttcttagtca 21514958  T
Q  196 aaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||    
T  21514957 aaaatcggattttcggactacttgatcggattgctccgaaacttcccc 21514910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 58 - 241
Target Start/End: Original strand, 29519374 - 29519557
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||  ||| ||||||||||||||| |||||||| ||||||||||| || | ||||||| ||| ||||||||||||||||||| | |    
T  29519374 agttcggattatataatatgaactgtatcagcacaaattctaaacatgtttgtaacatgaattgtcattttatggaaaatattaatcttcctaactatca 29519473  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||| |||||||||||||| |||| ||||||| |||||||||||| |||||| |||||||||||  |||||||  ||||||||    
T  29519474 tccttctattttgggtcattgttacgtgttcttggtcaaaaatcgggttttcgagctacttgatcaaattgctccgaaacttcc 29519557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 2539546 - 2539719
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| | |||| |||||||| || ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |    
T  2539546 agttcggattatataatccgaactctatccgcacaaattctgaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctca 2539645  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    ||||| | |||||||||||| |||| | ||| |||| ||||| ||  ||||||| |||||||||||||||||||    
T  2539646 tccttctgttttgggtcattgttacctattcgtagttaaaaaccgagttttcggactacttgatcggattgctc 2539719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 64 - 243
Target Start/End: Original strand, 5699666 - 5699846
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt- 162  Q
    |||||||||||||||| ||||| | ||||||| ||||| || ||||||||||| |||| ||||||| ||||||||||||||||| ||||||| ||||||     
T  5699666 gattatataatccgaactgtattaacacaaattctaaatatgtttgtaacatggatagtcattttaaggacaatattaatcttcataactctcatccttc 5699765  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |  |||||||||||| |||| | ||||||||||||||||||  |||||| |||||||||||||||||||  ||||||||||    
T  5699766 tgtttttgggtcattgttacctattcttagtcaaaaatcgggatttcggactacttgatcggattgctccgaaacttcccc 5699846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 65 - 222
Target Start/End: Complemental strand, 24604418 - 24604261
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||| ||| | ||||||||||||| ||||||||||||||||||   |||| |||||||| |||||||||||||||||||||| | |||||| |    
T  24604418 attatataatctgaactctatcagcacaaattctaaacatatttgtaacaaagatagtcattttagagacaatattaatcttcctaactttcatccttct 24604319  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatc 222  Q
     ||||| |||||| |||| |||||||||||||||||||| |||| |||||||||||||    
T  24604318 gttttgagtcattgttacctgttcttagtcaaaaatcgggtttttgggctacttgatc 24604261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 13801091 - 13800918
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||||||||| |||||| ||| ||||| |||| |||| |||||||| ||||||||||  ||   ||||||| | ||||||||||||||||||||||| |    
T  13801091 agttcggattacataatcggaactgtattagcataaattctaaacatgtttgtaacatagattatcattttatgaacaatattaatcttcctaactctca 13800992  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
    || || | |||||||||||| ||| |||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13800991 tcattatgttttgggtcattgttagttgttcttagtcaaaaatcggatttttgaactacttgatcggattgctc 13800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 83 - 240
Target Start/End: Original strand, 9905234 - 9905392
Alignment:
Q  83 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttaggga-caatattaatcttcctaactcttatccttttattttgggtcattctta 181  Q
    |||||||||||||  ||||||| ||||||||||| |||  ||||||||||| |||||||||| ||||| |||||||||||| | ||||| |||||| |||    
T  9905234 tatcagcacaaattttaaacatgtttgtaacatggataatcattttagggaacaatattaattttccttactcttatccttctgttttgagtcattgtta 9905333  T
Q  182 cttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 240  Q
    |   |||||||||||||||||| |||||||||||||||||||||||||||  |||||||    
T  9905334 ccaattcttagtcaaaaatcgggttttcgggctacttgatcggattgctccgaaacttc 9905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 58 - 227
Target Start/End: Complemental strand, 7734390 - 7734221
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    ||||| ||||||||||| |||| |||||||  |||||| |||||||| ||||||||| | || | ||||||| ||||||||||||||||||||||| | |    
T  7734390 agttcagattatataattcgaactgtatcaatacaaattctaaacatgtttgtaacacgaattgtcattttatggacaatattaatcttcctaactatca 7734291  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
    ||||||| |||||| ||||| |||  |||||||  ||||||||| | |||||||||||||||||| ||||    
T  7734290 tccttttgttttggatcattgttatctgttcttgatcaaaaatcaggttttcgggctacttgatcagatt 7734221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 32044537 - 32044638
Alignment:
Q  118 atagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctact 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |||||||||||||||||| | |||||||||||||    
T  32044537 atagtcattttagggacaatattaatcttcctaactcttatccttttgttttggatcattgttacctgttcttagtcaaaaatcaggttttcgggctact 32044636  T
Q  218 tg 219  Q
    ||    
T  32044637 tg 32044638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 81 - 241
Target Start/End: Original strand, 34528558 - 34528718
Alignment:
Q  81 tgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattctt 180  Q
    |||||||||||||||  | ||||| ||||||||||| |||  ||||| | ||| |||||||||||| |||||||| || ||| | |||||||||||| ||    
T  34528558 tgtatcagcacaaattatgaacatgtttgtaacatggatattcatttcaaggataatattaatctttctaactctcattcttctgttttgggtcattatt 34528657  T
Q  181 acttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    |  |||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||    
T  34528658 agctgttcttagtcaaaaatctggttttcggtctacttgatcggattgctccaaaacttcc 34528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 29289687 - 29289504
Alignment:
Q  60 ttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatc 159  Q
    |||||||||||||||| ||| |||||||||||||||  | ||||| ||||||||||  |||   |||||| ||||||||||||| ||||||||||  |||    
T  29289687 ttcggattatataatctgaactgtatcagcacaaattatgaacatctttgtaacatagatattaattttatggacaatattaattttcctaactcgcatc 29289588  T
Q  160 cttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||| | |||| ||||||| |||  |||||||||||||||||| | |||||| |||||||||||  |||||||  ||||||||||    
T  29289587 cttctgttttaggtcattgttagatgttcttagtcaaaaatcaggttttcgtgctacttgatcaaattgctccgaaacttcccc 29289504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 6704183 - 6704009
Alignment:
Q  65 attatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctttt 164  Q
    ||||||||||||||| ||| | ||||||||| | |||  ||||||||||||| ||| | | |||| ||||||||||||||||||||||||| ||| ||      
T  6704183 attatataatccgaactgtgttagcacaaattccaaatctatttgtaacatggataactagtttaaggacaatattaatcttcctaactctcatcattcg 6704084  T
Q  165 attttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttc 240  Q
    ||||| ||||||| |||  ||||  | |||||||||| | ||||||| ||| |||||| ||||||||| |||||||    
T  6704083 attttaggtcattgttagctgttaat-gtcaaaaatccggttttcggactatttgatcagattgctctgaaacttc 6704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 14038026 - 14037845
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||| ||||| ||||||||||||||| || |   | ||||||||||| ||| ||  ||||  ||| |||||||||||| ||||    |    
T  14038026 agttcggattatataacccgaactgtatcagcacaaattctgagtctctttgtaacatggataacctgtttaaagaccatattaatcttcttaacc---a 14037930  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttccc 242  Q
    ||||| | |||| ||||||| ||| |||||||||||||||||||   |||||| ||||||||||| |||||||| ||||| ||||    
T  14037929 tccttctgttttaggtcattgttagttgttcttagtcaaaaatctagttttcgtgctacttgatcagattgctccaaaacatccc 14037845  T

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Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 32035160 - 32035266
Alignment:
Q  8 gattacataatccaaaaaccccc-aaacacccttttttaaggtnnnnnnntagttcggattatataatccgaagtgtatcagcacaaatcctaaacatat 106  Q
    |||||||||||||  |||||||| |||||||||||||||||||       |||||||||||||||||||     ||||||||||||||||||||||||||    
T  32035160 gattacataatccggaaaccccctaaacacccttttttaaggtaaaa---tagttcggattatataatc-----tgtatcagcacaaatcctaaacatat 32035251  T
Q  107 ttgtaacatgtatag 121  Q
    |||||||||||||||    
T  32035252 ttgtaacatgtatag 32035266  T

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Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 68 - 239
Target Start/End: Original strand, 236899 - 237069
Alignment:
Q  68 atataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttatt 167  Q
    ||||||| |||| | |||||||||||||  | ||||| ||||||||||| | |  ||||||| |||| |||||||||||||||||||| ||| || ||||    
T  236899 atataattcgaactatatcagcacaaattatgaacatgtttgtaacatggaaaatcattttaaggaccatattaatcttcctaactctcatcgttctatt 236998  T
Q  168 ttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    || ||||||| ||| ||||| | |||| |||| |  || ||| || || |||||||||||||||| ||||||    
T  236999 ttaggtcattgttagttgttttcagtcgaaaa-ccaatattcaggttatttgatcggattgctctgaaactt 237069  T

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Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 16450355 - 16450481
Alignment:
Q  104 tatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcgg 203  Q
    ||||||||||||| ||| ||| |||| |||  |||||||||||||||| ||| ||| || | |||| ||||||| |||  |||||||||||||||||  |    
T  16450355 tatttgtaacatggataaccagtttaaggaacatattaatcttcctaaatctcatcattatgttttaggtcattgttagctgttcttagtcaaaaatttg 16450454  T
Q  204 attttcgggctacttgatcggattgct 230  Q
     |||| ||||||||||||| |||||||    
T  16450455 gtttttgggctacttgatcagattgct 16450481  T

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Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 33413408 - 33413365
Alignment:
Q  200 tcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  33413408 tcggattttcgggctacttgatcggattgctctgaaacttcccc 33413365  T

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Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 3365808 - 3365933
Alignment:
Q  106 tttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggat 205  Q
    ||||||||||| ||| | | |||| |||  |||||||||||||||||| | |||||| | |||| ||||||| ||| ||||||  | ||||||||| | |    
T  3365808 tttgtaacatggataacaagtttaaggaacatattaatcttcctaactttcatccttctgttttaggtcattgttaattgttcacactcaaaaatccggt 3365907  T
Q  206 tttcgggctacttgatcggattgctc 231  Q
    |||| || |||||||||  |||||||    
T  3365908 tttcaggttacttgatcatattgctc 3365933  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 10310427 - 10310311
Alignment:
Q  126 tttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcgga 225  Q
    |||| |||| |||||||||||||||||| | || ||| |||||| ||| ||| | | ||||||| |||||||||||  |||||  ||||||||| || ||    
T  10310427 tttaaggaccatattaatcttcctaactatcattcttctattttaggttattgtaagttgttctcagtcaaaaatccaatttttaggctacttggtcaga 10310328  T
Q  226 ttgctctaaaacttccc 242  Q
    ||| ||  |||||||||    
T  10310327 ttgttccgaaacttccc 10310311  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 17501003 - 17501054
Alignment:
Q  100 aacatatttgtaacatgtatagccattttagggacaatattaatcttcctaa 151  Q
    ||||| ||||||||||| |||| ||||||| ||||| |||||||||||||||    
T  17501003 aacatgtttgtaacatgaatagtcattttaaggacattattaatcttcctaa 17501054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 7412875 - 7412916
Alignment:
Q  8 gattacataatccaaaaacccccaaacacccttttttaaggt 49  Q
    ||||||||||||| |||||||| ||||||||||||| |||||    
T  7412875 gattacataatccgaaaacccctaaacaccctttttcaaggt 7412916  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 7412971 - 7413028
Alignment:
Q  184 tgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcc 241  Q
    ||||||||| |||||||| | ||||||| ||| |||||||||||||||  ||||||||    
T  7412971 tgttcttagccaaaaatcaggttttcggactagttgatcggattgctccgaaacttcc 7413028  T

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Target: scaffold0027 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 64 - 243
Target Start/End: Complemental strand, 142021 - 141843
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||  ||||||     
T  142021 gattatataatccgaactgtatcagcacaaattctaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactcccatccttc 141922  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |  ||||||||||| || | |||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  141921 t-gtttgggtcattgttgcatgttcttagtcaaaaatcgggttttcagactacttgatcggattgctccgaaacttcccc 141843  T

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Target: scaffold0508 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 243
Target Start/End: Complemental strand, 3459 - 3273
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||| ||| |||||| || ||||| |||||||| ||||||||||  |||  ||||||||||||||||||||||||| ||||||| |    
T  3459 agttcggattatataatctgaactgtatcggcgcaaattctaaacatgtttgtaacatcgataatcattttagggacaatattaatcttcgtaactctca 3360  T
Q  158 tccttttattttgggtcattcttacttgttcttagt-caaaaatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    ||||| | |||||||||||| |||||||||||||||  ||||||| | |||||||||||||||||| ||||||||| ||||||||||    
T  3359 tccttctgttttgggtcattgttacttgttcttagtaaaaaaatcaggttttcgggctacttgatcagattgctctgaaacttcccc 3273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 9561 - 9380
Alignment:
Q  58 agttcggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactctta 157  Q
    |||||||||||||||||||||| |||||||||| |||| ||| |||| ||||||||||| |||| ||||||| ||||||||||||| ||  ||||| | |    
T  9561 agttcggattatataatccgaactgtatcagcataaattctatacatgtttgtaacatggatagtcattttatggacaatattaatatttataactttca 9462  T
Q  158 tccttttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctctaaaactt 239  Q
    || || | |||||||||||| |||| |||||||||| |||||||||||||||||  ||||||||||||||||||| ||||||    
T  9461 tcattctgttttgggtcattgttacatgttcttagttaaaaatcggattttcggattacttgatcggattgctctgaaactt 9380  T

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Target: scaffold0010 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 98 - 243
Target Start/End: Original strand, 140620 - 140765
Alignment:
Q  98 taaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttttattttgggtcattcttacttgttcttagtcaaa 197  Q
    ||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  140620 taaacatgtttgtaacattgatagtcattttagggacaatattaatcttcctaactctcatccttttgttttaggtcattgttacttgttcttagtcaaa 140719  T
Q  198 aatcggattttcgggctacttgatcggattgctctaaaacttcccc 243  Q
    |||||| ||||| | |||||||||||||||||||  ||||||||||    
T  140720 aatcgggttttcagactacttgatcggattgctccgaaacttcccc 140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 23228 - 23301
Alignment:
Q  89 cacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||| | |||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  23228 cacaaattcgaaacatgtttgtaacatggatagtcattttagggacaatattaatcttcctaactctcatcctt 23301  T

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Target: scaffold0006 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 60028 - 59865
Alignment:
Q  64 gattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatccttt 163  Q
    |||||||||||  ||| |||| ||||||||||  | ||||| ||||||||||  |||| |||||||  ||||||||||||||||||||||| |      |    
T  60028 gattatataatatgaactgtaccagcacaaattttgaacatgtttgtaacatagatagtcattttaaagacaatattaatcttcctaactcatggatagt 59929  T
Q  164 tattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggatt 227  Q
     ||||| ||||||| |||   ||||||||||||||||  |||||||||| ||||||||| ||||    
T  59928 cattttaggtcattgttagccgttcttagtcaaaaatttgattttcgggttacttgatcagatt 59865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 59480 - 59551
Alignment:
Q  83 tatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactc 154  Q
    |||||| ||||||  ||||||| ||||| ||||| |||| ||||||| |||||||||||||||| |||||||    
T  59480 tatcagtacaaattttaaacatgtttgtgacatggatagtcattttaaggacaatattaatctttctaactc 59551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 231
Target Start/End: Original strand, 4471 - 4639
Alignment:
Q  63 ggattatataatccgaagtgtatcagcacaaatcctaaacatatttgtaacatgtatagccattttagggacaatattaatcttcctaactcttatcctt 162  Q
    ||||||||||||| ||| |||||| ||||||||  | ||| | ||||||| ||  |||| |||||||  ||| |||||||||||| ||||  | ||| ||    
T  4471 ggattatataatctgaactgtatcggcacaaattttgaacctgtttgtaaaatagatagtcattttaaagaccatattaatcttcttaaccatcatcatt 4570  T
Q  163 ttattttgggtcattcttacttgttcttagtcaaaaatcggattttcgggctacttgatcggattgctc 231  Q
     | |||  ||||||| ||| |||||| ||||| |||||  | |||| | |||| |||||||||||||||    
T  4571 atgtttgaggtcattgttagttgttcctagtccaaaatacggtttttgagctatttgatcggattgctc 4639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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