View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11834_low_6 (Length: 542)

Name: NF11834_low_6
Description: NF11834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11834_low_6
NF11834_low_6
[»] chr5 (34 HSPs)
chr5 (297-484)||(34259159-34259340)
chr5 (297-523)||(2681115-2681340)
chr5 (12-303)||(34258586-34258871)
chr5 (299-523)||(23044956-23045179)
chr5 (297-514)||(12915371-12915588)
chr5 (297-470)||(12250870-12251041)
chr5 (297-496)||(20634079-20634279)
chr5 (297-496)||(20650193-20650393)
chr5 (297-515)||(43523659-43523864)
chr5 (300-447)||(18116547-18116692)
chr5 (403-523)||(28568986-28569106)
chr5 (372-487)||(12712558-12712673)
chr5 (297-376)||(10834109-10834188)
chr5 (372-487)||(12773822-12773937)
chr5 (230-303)||(29999965-30000038)
chr5 (400-523)||(38972923-38973046)
chr5 (383-523)||(4920810-4920950)
chr5 (452-526)||(39422399-39422473)
chr5 (390-487)||(6810149-6810246)
chr5 (385-484)||(32574942-32575041)
chr5 (383-523)||(5908653-5908793)
chr5 (313-348)||(4583056-4583091)
chr5 (441-523)||(10127116-10127198)
chr5 (438-523)||(4583158-4583243)
chr5 (406-483)||(10822531-10822608)
chr5 (383-516)||(18207003-18207135)
chr5 (313-346)||(27302854-27302887)
chr5 (383-484)||(27900405-27900506)
chr5 (232-291)||(5679286-5679346)
chr5 (403-530)||(6155878-6156003)
chr5 (302-346)||(12447307-12447351)
chr5 (439-523)||(12866516-12866600)
chr5 (383-487)||(17153153-17153257)
chr5 (296-348)||(33420447-33420499)
[»] chr8 (40 HSPs)
chr8 (297-523)||(15068552-15068777)
chr8 (297-487)||(40789487-40789677)
chr8 (298-523)||(10297356-10297582)
chr8 (318-506)||(2183587-2183774)
chr8 (318-424)||(2189910-2190016)
chr8 (297-417)||(8031038-8031156)
chr8 (297-412)||(4594212-4594325)
chr8 (376-523)||(15173844-15173991)
chr8 (361-487)||(14507227-14507350)
chr8 (241-303)||(41429437-41429499)
chr8 (382-523)||(32303044-32303185)
chr8 (231-276)||(43724609-43724654)
chr8 (252-300)||(3441879-3441927)
chr8 (419-523)||(14155552-14155656)
chr8 (298-340)||(2190017-2190059)
chr8 (390-516)||(20399583-20399709)
chr8 (383-484)||(14186304-14186405)
chr8 (230-291)||(38513440-38513501)
chr8 (383-523)||(29108786-29108926)
chr8 (230-285)||(12655639-12655694)
chr8 (231-282)||(23719344-23719395)
chr8 (408-523)||(27932422-27932537)
chr8 (229-295)||(9615871-9615937)
chr8 (413-523)||(29416151-29416260)
chr8 (297-330)||(15174006-15174039)
chr8 (402-523)||(27777162-27777283)
chr8 (402-523)||(28345494-28345615)
chr8 (297-329)||(2183786-2183818)
chr8 (400-484)||(17469256-17469340)
chr8 (383-523)||(24927933-24928073)
chr8 (431-523)||(35215568-35215659)
chr8 (402-517)||(14687402-14687517)
chr8 (313-348)||(17220654-17220689)
chr8 (313-348)||(27932350-27932385)
chr8 (383-505)||(29918591-29918713)
chr8 (313-347)||(39445685-39445719)
chr8 (438-523)||(5858616-5858701)
chr8 (383-484)||(9642354-9642455)
chr8 (383-487)||(30481421-30481525)
chr8 (383-523)||(45236049-45236189)
[»] chr7 (53 HSPs)
chr7 (297-506)||(31425911-31426120)
chr7 (297-511)||(18683877-18684091)
chr7 (300-470)||(32546098-32546268)
chr7 (297-515)||(27063046-27063259)
chr7 (297-469)||(28309396-28309567)
chr7 (300-510)||(29014929-29015145)
chr7 (297-509)||(30839112-30839324)
chr7 (298-515)||(42908013-42908219)
chr7 (297-523)||(29157252-29157480)
chr7 (297-469)||(37103145-37103317)
chr7 (348-511)||(22973342-22973505)
chr7 (297-511)||(43218186-43218400)
chr7 (297-470)||(21750689-21750858)
chr7 (343-505)||(44845117-44845278)
chr7 (297-507)||(2471898-2472096)
chr7 (297-376)||(27062375-27062454)
chr7 (405-523)||(39317006-39317124)
chr7 (227-303)||(45870398-45870474)
chr7 (298-356)||(22962468-22962526)
chr7 (403-523)||(30650640-30650760)
chr7 (384-515)||(27063324-27063455)
chr7 (230-303)||(4909627-4909701)
chr7 (400-517)||(3157089-3157206)
chr7 (405-523)||(10072477-10072595)
chr7 (400-517)||(12980383-12980500)
chr7 (230-295)||(38438442-38438507)
chr7 (383-523)||(16866158-16866298)
chr7 (297-349)||(27850441-27850493)
chr7 (400-515)||(7780014-7780129)
chr7 (400-491)||(18825868-18825959)
chr7 (383-478)||(27850335-27850430)
chr7 (382-517)||(35074458-35074593)
chr7 (438-517)||(37218049-37218128)
chr7 (415-477)||(10990871-10990933)
chr7 (407-517)||(45885735-45885845)
chr7 (230-290)||(13751837-13751897)
chr7 (383-523)||(18125192-18125332)
chr7 (383-515)||(21702648-21702780)
chr7 (381-517)||(45380094-45380230)
chr7 (313-348)||(3227062-3227097)
chr7 (313-348)||(17885407-17885442)
chr7 (313-348)||(37182217-37182252)
chr7 (313-348)||(38139909-38139944)
chr7 (313-348)||(39316937-39316972)
chr7 (313-348)||(44658565-44658600)
chr7 (297-344)||(44845317-44845364)
chr7 (441-523)||(37182321-37182403)
chr7 (407-517)||(43507458-43507568)
chr7 (383-448)||(3774058-3774123)
chr7 (379-484)||(19440013-19440118)
chr7 (379-484)||(23475266-23475371)
chr7 (403-487)||(5377094-5377178)
chr7 (439-483)||(33841123-33841167)
[»] chr4 (60 HSPs)
chr4 (297-516)||(45065153-45065372)
chr4 (298-523)||(30672868-30673091)
chr4 (298-470)||(21544484-21544656)
chr4 (297-484)||(29527717-29527903)
chr4 (298-517)||(31415902-31416120)
chr4 (298-515)||(41914969-41915175)
chr4 (309-515)||(1866522-1866727)
chr4 (297-470)||(30266348-30266521)
chr4 (297-470)||(30285667-30285840)
chr4 (298-445)||(568322-568469)
chr4 (299-484)||(10574423-10574614)
chr4 (297-523)||(18423494-18423720)
chr4 (298-424)||(11172874-11173000)
chr4 (300-511)||(47103640-47103856)
chr4 (297-484)||(31782519-31782704)
chr4 (307-410)||(16216731-16216834)
chr4 (331-509)||(14605904-14606081)
chr4 (297-447)||(24637098-24637246)
chr4 (297-523)||(15733491-15733709)
chr4 (225-303)||(30783853-30783931)
chr4 (230-297)||(29236005-29236072)
chr4 (452-523)||(37349171-37349242)
chr4 (230-303)||(24154363-24154437)
chr4 (234-303)||(7325955-7326024)
chr4 (401-487)||(12825462-12825548)
chr4 (225-303)||(45789235-45789312)
chr4 (382-523)||(6382237-6382378)
chr4 (230-303)||(22129583-22129656)
chr4 (230-297)||(7205328-7205395)
chr4 (357-424)||(15132195-15132262)
chr4 (383-505)||(26564821-26564943)
chr4 (382-515)||(44317524-44317657)
chr4 (383-523)||(7608960-7609100)
chr4 (405-517)||(10302096-10302208)
chr4 (383-487)||(40420586-40420690)
chr4 (408-526)||(4741179-4741296)
chr4 (383-484)||(1724314-1724415)
chr4 (402-487)||(16575121-16575206)
chr4 (382-523)||(31918523-31918664)
chr4 (438-523)||(43309528-43309613)
chr4 (383-515)||(47550326-47550458)
chr4 (406-497)||(3737789-3737880)
chr4 (452-526)||(12505502-12505577)
chr4 (313-348)||(31752399-31752434)
chr4 (313-348)||(42774704-42774739)
chr4 (313-348)||(47239502-47239537)
chr4 (302-348)||(425755-425801)
chr4 (401-523)||(11028081-11028203)
chr4 (225-290)||(15016202-15016268)
chr4 (302-348)||(19534387-19534433)
chr4 (400-470)||(32585496-32585566)
chr4 (228-270)||(33095137-33095179)
chr4 (302-348)||(37107343-37107389)
chr4 (402-523)||(36919132-36919253)
chr4 (383-428)||(37349113-37349158)
chr4 (438-487)||(39375323-39375372)
chr4 (440-484)||(11173020-11173064)
chr4 (307-347)||(29035684-29035724)
chr4 (307-347)||(29047817-29047857)
chr4 (383-523)||(43893218-43893357)
[»] scaffold0008 (2 HSPs)
scaffold0008 (297-523)||(67647-67873)
scaffold0008 (297-523)||(75490-75716)
[»] chr1 (48 HSPs)
chr1 (297-483)||(16237308-16237494)
chr1 (300-468)||(10450078-10450246)
chr1 (297-523)||(19003630-19003844)
chr1 (341-506)||(35069870-35070035)
chr1 (297-507)||(12718751-12718955)
chr1 (297-411)||(19892874-19892985)
chr1 (297-397)||(37032239-37032339)
chr1 (225-302)||(11643719-11643796)
chr1 (384-511)||(23058452-23058579)
chr1 (230-303)||(14499990-14500063)
chr1 (400-517)||(36187190-36187307)
chr1 (383-515)||(9982862-9982994)
chr1 (383-469)||(48125701-48125787)
chr1 (438-523)||(5181079-5181164)
chr1 (230-303)||(9141385-9141458)
chr1 (230-303)||(21973219-21973292)
chr1 (297-370)||(48024385-48024457)
chr1 (383-523)||(49250737-49250877)
chr1 (419-517)||(13798259-13798357)
chr1 (383-523)||(29871249-29871389)
chr1 (408-523)||(10778531-10778646)
chr1 (300-356)||(17516327-17516385)
chr1 (383-478)||(29936401-29936496)
chr1 (383-517)||(51421843-51421977)
chr1 (323-376)||(23058319-23058372)
chr1 (438-523)||(24710887-24710972)
chr1 (439-523)||(16408983-16409067)
chr1 (297-329)||(23058255-23058287)
chr1 (383-487)||(41476952-41477056)
chr1 (439-523)||(44615439-44615523)
chr1 (439-523)||(44793046-44793130)
chr1 (313-348)||(5180983-5181018)
chr1 (313-348)||(17092075-17092110)
chr1 (313-348)||(17134885-17134920)
chr1 (313-348)||(18354196-18354231)
chr1 (382-481)||(28297918-28298017)
chr1 (438-505)||(42707819-42707886)
chr1 (313-348)||(42707946-42707981)
chr1 (313-348)||(50426771-50426806)
chr1 (405-523)||(34085242-34085360)
chr1 (230-284)||(51623964-51624018)
chr1 (315-348)||(13390353-13390386)
chr1 (439-516)||(39616333-39616410)
chr1 (400-484)||(8880450-8880534)
chr1 (383-515)||(12494995-12495127)
chr1 (313-345)||(16408884-16408916)
chr1 (383-523)||(19572476-19572616)
chr1 (383-523)||(23490735-23490875)
[»] chr2 (33 HSPs)
chr2 (297-484)||(38342522-38342708)
chr2 (308-470)||(3547076-3547238)
chr2 (297-484)||(43371455-43371639)
chr2 (297-487)||(30978824-30979014)
chr2 (298-434)||(42576512-42576648)
chr2 (297-484)||(4427823-4428010)
chr2 (297-478)||(14331426-14331607)
chr2 (297-523)||(26755651-26755865)
chr2 (313-484)||(18485565-18485734)
chr2 (297-484)||(6164476-6164668)
chr2 (300-506)||(44057776-44057991)
chr2 (297-409)||(24051696-24051806)
chr2 (230-282)||(9458983-9459035)
chr2 (400-523)||(30846948-30847071)
chr2 (374-484)||(15546721-15546830)
chr2 (230-303)||(27341464-27341537)
chr2 (438-523)||(37472723-37472808)
chr2 (383-463)||(25210362-25210442)
chr2 (381-484)||(35248388-35248491)
chr2 (383-484)||(35965320-35965420)
chr2 (230-303)||(37039181-37039254)
chr2 (438-523)||(37106732-37106817)
chr2 (430-526)||(13954778-13954873)
chr2 (430-526)||(14095985-14096080)
chr2 (383-523)||(24414096-24414236)
chr2 (313-348)||(13705477-13705512)
chr2 (313-348)||(45115496-45115531)
chr2 (439-523)||(45115599-45115685)
chr2 (401-523)||(13830739-13830860)
chr2 (302-348)||(14540708-14540754)
chr2 (258-300)||(36034745-36034787)
chr2 (383-515)||(7314620-7314752)
chr2 (383-523)||(9632371-9632511)
[»] chr6 (27 HSPs)
chr6 (297-477)||(29199895-29200075)
chr6 (311-523)||(20610946-20611158)
chr6 (297-515)||(9458563-9458779)
chr6 (297-487)||(18908792-18908981)
chr6 (300-376)||(9458221-9458297)
chr6 (351-506)||(17546883-17547038)
chr6 (384-511)||(9458843-9458970)
chr6 (391-521)||(12678060-12678190)
chr6 (381-523)||(5863347-5863489)
chr6 (383-517)||(27738756-27738890)
chr6 (403-484)||(28079699-28079780)
chr6 (383-523)||(3483887-3484027)
chr6 (400-484)||(14410858-14410942)
chr6 (383-523)||(27534668-27534808)
chr6 (383-523)||(32853828-32853968)
chr6 (383-496)||(256483-256596)
chr6 (400-517)||(2367327-2367444)
chr6 (230-297)||(34637706-34637773)
chr6 (441-523)||(10188044-10188126)
chr6 (314-348)||(12309510-12309544)
chr6 (383-505)||(13769056-13769178)
chr6 (307-348)||(12678210-12678251)
chr6 (403-496)||(20349068-20349161)
chr6 (438-523)||(30986292-30986377)
chr6 (383-483)||(9402573-9402672)
chr6 (401-517)||(10142488-10142604)
chr6 (383-523)||(12141369-12141509)
[»] chr3 (41 HSPs)
chr3 (300-515)||(1772371-1772586)
chr3 (298-470)||(40796154-40796326)
chr3 (298-429)||(2487694-2487825)
chr3 (325-508)||(35687470-35687653)
chr3 (300-370)||(23330065-23330135)
chr3 (230-303)||(11354729-11354802)
chr3 (383-515)||(39728655-39728787)
chr3 (229-296)||(26495891-26495958)
chr3 (438-523)||(52572648-52572733)
chr3 (403-523)||(4557269-4557389)
chr3 (419-523)||(42243407-42243511)
chr3 (383-515)||(48390789-48390921)
chr3 (383-523)||(49580048-49580188)
chr3 (400-523)||(54317145-54317268)
chr3 (431-509)||(2490337-2490415)
chr3 (383-515)||(42758358-42758490)
chr3 (229-280)||(51972051-51972102)
chr3 (431-517)||(3385826-3385912)
chr3 (400-498)||(19111735-19111833)
chr3 (438-523)||(44953399-44953484)
chr3 (383-523)||(4016008-4016148)
chr3 (400-484)||(30616284-30616368)
chr3 (400-528)||(44252748-44252876)
chr3 (452-523)||(6738369-6738440)
chr3 (400-523)||(7469742-7469865)
chr3 (438-517)||(22535811-22535890)
chr3 (313-348)||(22535957-22535992)
chr3 (297-348)||(30682742-30682793)
chr3 (313-348)||(34025891-34025926)
chr3 (400-523)||(39655237-39655360)
chr3 (383-478)||(44172610-44172705)
chr3 (383-478)||(44179310-44179405)
chr3 (400-523)||(44639275-44639398)
chr3 (313-348)||(48390933-48390968)
chr3 (455-505)||(23910234-23910284)
chr3 (400-522)||(48305606-48305728)
chr3 (391-523)||(10043246-10043378)
chr3 (228-260)||(26149414-26149446)
chr3 (383-515)||(34025938-34026070)
chr3 (403-523)||(34119660-34119780)
chr3 (177-213)||(48922414-48922450)
[»] scaffold0184 (1 HSPs)
scaffold0184 (297-509)||(2867-3079)
[»] scaffold0015 (1 HSPs)
scaffold0015 (297-483)||(55902-56087)
[»] scaffold0013 (2 HSPs)
scaffold0013 (297-468)||(128140-128311)
scaffold0013 (297-470)||(105486-105659)
[»] scaffold0059 (1 HSPs)
scaffold0059 (297-469)||(69993-70165)
[»] scaffold0182 (1 HSPs)
scaffold0182 (297-470)||(16866-17038)
[»] scaffold0005 (1 HSPs)
scaffold0005 (331-509)||(211297-211474)
[»] scaffold0036 (1 HSPs)
scaffold0036 (383-498)||(33377-33492)
[»] scaffold0189 (1 HSPs)
scaffold0189 (313-348)||(4194-4229)
[»] scaffold0157 (1 HSPs)
scaffold0157 (452-526)||(14900-14975)
[»] scaffold0009 (1 HSPs)
scaffold0009 (441-517)||(107361-107437)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 7e-69; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 297 - 484
Target Start/End: Original strand, 34259159 - 34259340
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||      ||||||||| ||||||||||||||    
T  34259159 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaatcccctcaaca------aaaatatgacttttctacattcgg 34259252  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  34259253 ggagggtttggatataggttcagggtgggtacatatatcctcgttacccgtccggtacccatattttgaaatcgaggaaaattcaaac 34259340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 297 - 523
Target Start/End: Original strand, 2681115 - 2681340
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||||||    
T  2681115 atgaaagttcttatttcatgacaattatcaaaccaaataacatgacatatcattatcaacccc-tcatcaaaaacaaaaatatgacctttctacattcgg 2681213  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
      ||||||||||||| ||||| ||||||||||  |||||| | |||||| ||| ||||| |||||||||||||| ||||||| ||||||||  || ||||    
T  2681214 atagggtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaac 2681313  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
     | |||||||||||||||||| |||||    
T  2681314 tcagtcaaatcggggaaaacccgtcaa 2681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 12 - 303
Target Start/End: Complemental strand, 34258871 - 34258586
Alignment:
Q  12 attgtcatgcctaattgttggatgcatcaaacaacatatgtttgctttactgcgtgaatgcgggcagtagtcttttgattgtagggtatcctcatccttg 111  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||    || |||||||||||||||||||    |||||||    
T  34258871 attgccatacctaattgttggatgcatcaaacaacatatgtttgctttattgtgtgaatgcgg----tattcttttgattgtagggtat----atccttg 34258780  T
Q  112 attgatttgtgaaaggcagtttctactttcccctgacgaacacttgtctagtcacaaatttaaaataattactaccgtcgtcccttattatagggccctt 211  Q
    ||||||||||||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||    
T  34258779 attgatttgtgaaag-cagtttctactttcccc-gatcaacacttgtctagtcacaaatttaaaataattactacctccgtcccttattataggaccctt 34258682  T
Q  212 ttnnnnnnnnnngacgaaaattaagaaaattgattg------ttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    ||          || | | ||| ||||| |||||||      ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  34258681 tt--aaaaaaaagagggatatttagaaagttgattgttggatttgtattaattttgttgacaattattattgttttacatgtttatcctttatgaaag 34258586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 299 - 523
Target Start/End: Complemental strand, 23045179 - 23044956
Alignment:
Q  299 gaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgggg 398  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||     
T  23045179 gaaagttcttatatcatgacaattatcaaaccaaataagatgacatatcattatcaaccccctaaa-aaaaacaaaaatatgacctttctacattcgggt 23045081  T
Q  399 agggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccc 498  Q
    ||||||| ||||| ||||| |||||| |||| |||||  |||||||| ||| |||||||||||||||||||| |||||||  |||| || ||| |||| |    
T  23045080 agggttttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccatacccaaactc 23044981  T
Q  499 cgtcaaatcggggaaaacctgtcaa 523  Q
     ||||||| ||| |||||| |||||    
T  23044980 agtcaaattgggaaaaacccgtcaa 23044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 297 - 514
Target Start/End: Original strand, 12915371 - 12915588
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  12915371 atgaaagttcttatatcatgacaatcatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacgaaaacatgatctttctacattcgg 12915470  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||||||||||||| | ||| | |||| ||||  ||||| | ||||| ||||  | || ||||| |||||||| | ||||| ||||| || ||| || |    
T  12915471 gtagggtttgggtatggcttcggagtgggtacatgtatccccattacctgtcccatgcctgtattatgaaatcgggaaaaacccaaacccatacccaacc 12915570  T
Q  497 cccgtcaaatcggggaaa 514  Q
    || |||||||||||||||    
T  12915571 ccagtcaaatcggggaaa 12915588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 297 - 470
Target Start/End: Original strand, 12250870 - 12251041
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||||||||||||| | ||| || |  ||||||||||| |    
T  12250870 atgaaagttcttatatcatgacaattatcaaaccaaataatatggcatatcattatcaatcccctcaacaaaaa-ataaacat-acctttctacattcag 12250967  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    | ||||||||||||| ||||||| |||| |||| |||||   ||||||||||||||||||||||||||||||||    
T  12250968 gtagggtttgggtatgggttcagagtgggtacatatatctctgttacccgtccggtacccgtattttgaaatcg 12251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 297 - 496
Target Start/End: Original strand, 20634079 - 20634279
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||| ||    
T  20634079 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctatatttgg 20634178  T
Q  397 ggaggg-tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaa 495  Q
    | |||| ||||||||| ||||| |||||  | || ||||||   |||||||||   || ||||||||| |||| | |||||||| ||||||| ||| |||    
T  20634179 gtagggttttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcatacccaaa 20634278  T
Q  496 c 496  Q
    |    
T  20634279 c 20634279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 297 - 496
Target Start/End: Original strand, 20650193 - 20650393
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||| ||    
T  20650193 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctatatttgg 20650292  T
Q  397 ggaggg-tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaa 495  Q
    | |||| ||||||||| ||||| |||||  | || ||||||   |||||||||   || ||||||||| |||| | |||||||| ||||||| ||| |||    
T  20650293 gtagggttttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcatacccaaa 20650392  T
Q  496 c 496  Q
    |    
T  20650393 c 20650393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 297 - 515
Target Start/End: Original strand, 43523659 - 43523864
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||  ||||||||||||||||||||||||| |  ||||||||||  ||| |||||||||    
T  43523659 atgaaagttcttatatcatgaaaattatcaatccaaataacatggtatatcattatcaaccccctcaacaaca--aaaaatatgacctttttacattcgg 43523756  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||||||||  |||| ||||||||||| ||||||           ||| ||||||||||||||||||| ||||||| |||||||| ||| ||||    
T  43523757 gtagggtttgggtatgagttcggggtggatacatatatcc-----------ccgttacccgtattttgaaatcggggaaaacccaaactcatacccaaac 43523845  T
Q  497 cccgtcaaatcggggaaaa 515  Q
     | ||||||||||| ||||    
T  43523846 tcagtcaaatcgggaaaaa 43523864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 300 - 447
Target Start/End: Complemental strand, 18116692 - 18116547
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgggga 399  Q
    |||||||||||||||||| ||||||||| | || |||||||  ||||||||||||||||||||||||| || ||||||||||  ||| |||||||||| |    
T  18116692 aaagttcttatatcatgagaattatcaatccaa-taacatggtatatcattatcaaccccctcaacaacaa-aaaaatatgacctttttacattcgggta 18116595  T
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgt 447  Q
    ||||||||||||  |||| ||||||||||| |||||| ||||||||||    
T  18116594 gggtttgggtatgagttcggggtggatacatatatccccgttacccgt 18116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 403 - 523
Target Start/End: Complemental strand, 28569106 - 28568986
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtc 502  Q
    ||||||||| ||||| |||||| |||  |||||| |||||||||||| ||||||| |||||||||||| ||||||  |||||||| ||| |||||| |||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  503 aaatcggggaaaacctgtcaa 523  Q
    ||||| ||||||||| |||||    
T  28569006 aaatcagggaaaacccgtcaa 28568986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 12712673 - 12712558
Alignment:
Q  372 aaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcga 471  Q
    ||||||||||  |||||||||||||| ||||||||||||| |||||  ||||| |||| |||||  ||||| |||||| ||||||||||||||||||||     
T  12712673 aaaaatatgacatttctacattcgggtagggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcgg 12712574  T
Q  472 ggaaaactcaaactca 487  Q
     |||||| ||||||||    
T  12712573 agaaaacccaaactca 12712558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 10834109 - 10834188
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaa 376  Q
    ||||| |||| | |||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  10834109 atgaatgttcatttatcatgatagttatcaaaccaaataacatgacatatcattatcaacccccttaacaaaaacaaaaa 10834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 12773937 - 12773822
Alignment:
Q  372 aaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcga 471  Q
    ||||||||||  |||||||||||||| |||||||| |||| |||||  ||||| |||| |||||  ||||| |||||| ||||||||||||||||||||     
T  12773937 aaaaatatgacatttctacattcgggtagggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcgg 12773838  T
Q  472 ggaaaactcaaactca 487  Q
     |||||| ||||||||    
T  12773837 agaaaacccaaactca 12773822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 30000038 - 29999965
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    ||||||||||||| ||||||| |||||||||||| ||||||  || |||||||||| |||||||||||||||||    
T  30000038 aattaagaaaattaattgttgaattaattttgtttacaatttatattgttttacatatttatcctttatgaaag 29999965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 400 - 523
Target Start/End: Original strand, 38972923 - 38973046
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    ||||||| |||| ||||| |||||| |||  |||| | |||||||  |||  ||||| | ||||||||||| | ||||| |||||||| ||||||||||     
T  38972923 gggtttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaaccca 38973022  T
Q  500 gtcaaatcggggaaaacctgtcaa 523  Q
    |||||| |||||||||||||||||    
T  38973023 gtcaaaacggggaaaacctgtcaa 38973046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 4920810 - 4920950
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| ||||||||||  |||| | ||||||||||||  ||||||| |||||| |||| ||||||| ||     
T  4920810 ttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 4920909  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || | | |||||| |||||| ||| ||||||| |||||    
T  4920910 acccataaccaaacccagtcaaaacggagaaaacccgtcaa 4920950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 39422399 - 39422473
Alignment:
Q  452 tacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaattt 526  Q
    ||||||| ||||||||||||| ||||| |||||||| | | ||||||  ||||| ||||||||||||||||||||    
T  39422399 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaattt 39422473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 487
Target Start/End: Original strand, 6810149 - 6810246
Alignment:
Q  390 cattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    ||||||||  |||||||||||| ||||| |||||  |||  ||||||||||||||||| | |||||||| || | |||||| ||||||| ||||||||    
T  6810149 cattcgggatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgttctaaaatcggggaaaacccaaactca 6810246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 385 - 484
Target Start/End: Complemental strand, 32575041 - 32574942
Alignment:
Q  385 ttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||||||||||||| |||||||||| | ||||| || ||| |||| ||||||  ||||||| ||| ||| | || ||||||||||| ||||||| |||||    
T  32575041 ttctacattcggggcgggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctgtgttttgaaatcggggaaaacccaaac 32574942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 5908793 - 5908653
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||  |||||  |||| |||| | ||||||||||||  ||||||| ||| || |||| ||||||||||     
T  5908793 ttttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcat 5908694  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| ||||||  |||||  |||||||||| |||||    
T  5908693 acccatacccaaacccaatcaaaatggggaaaacccgtcaa 5908653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 4583056 - 4583091
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4583056 catgacaattatcaaacaaaataacatgacatatca 4583091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 523
Target Start/End: Original strand, 10127116 - 10127198
Alignment:
Q  441 tacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||  ||||||| |||||| |||| ||||||| || || || ||| |||||| |||||| ||||||||||| |||||    
T  10127116 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 10127198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 4583158 - 4583243
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| ||||||||||| ||||||| || || || | | ||||||  ||||| ||||||||||| |||||    
T  4583158 cgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaaaacggggaaaacccgtcaa 4583243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 483
Target Start/End: Complemental strand, 10822608 - 10822531
Alignment:
Q  406 gggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    |||||| ||||| |||||| |||| ||| || ||||||||||||  ||||||| |||||||||||  |||||| ||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaacccaaa 10822531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 516
Target Start/End: Original strand, 18207003 - 18207135
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||||||  |||||||  ||| ||||| |||||| |||  |||| |  |||||| ||||  ||| ||  ||||||||||||||||||| |||    
T  18207003 ttttctacattcgggacgggtttgaatatgggttc-gggtgggtacctatatacctgttacctgtcccatacacgagttttgaaatcgaggaaaacccaa 18207101  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaac 516  Q
    |||||  || |||||| |||||| |||| |||||    
T  18207102 actcatgcccaaacccagtcaaaacgggaaaaac 18207135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 346
Target Start/End: Complemental strand, 27302887 - 27302854
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatat 346  Q
    ||||||||||||||||| ||||||||||||||||    
T  27302887 catgacaattatcaaacaaaataacatgacatat 27302854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 27900506 - 27900405
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| ||||||||||| || ||||||||| |||||  | ||| |||  |||||| | ||||||||||  ||||| | ||||||||||| | |||||||||    
T  27900506 ttttatacattcggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaa 27900407  T
Q  483 ac 484  Q
    ||    
T  27900406 ac 27900405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 291
Target Start/End: Original strand, 5679286 - 5679346
Alignment:
Q  232 ttaagaaaattgattgttgtattaat-tttgttgacaattgttactgttttacatgtttat 291  Q
    |||| ||| ||||||||||||||||| |||||||| ||||| || ||||||||| ||||||    
T  5679286 ttaaaaaagttgattgttgtattaatatttgttgataattggtattgttttacaagtttat 5679346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 530
Target Start/End: Complemental strand, 6156003 - 6155878
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtc 502  Q
    ||||||||| ||||| |||||| |||| |||| |   ||||| ||||  ||||||| ||||||||||| ||||||| ||||| || ||| |||||| |||    
T  6156003 tttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtc 6155906  T
Q  503 aaatcggggaaaacctgtcaattttgat 530  Q
    ||| ||  ||||||| || || ||||||    
T  6155905 aaaacgaagaaaacccgttaaatttgat 6155878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 302 - 346
Target Start/End: Original strand, 12447307 - 12447351
Alignment:
Q  302 agttcttatatcatgacaattatcaaactaaataacatgacatat 346  Q
    |||| ||||| || |||||||||||||| ||||||||||||||||    
T  12447307 agtttttataacacgacaattatcaaacaaaataacatgacatat 12447351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 523
Target Start/End: Complemental strand, 12866600 - 12866516
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||||  ||||| | |||||||||||  ||||||||| || || ||| |||||| ||||||  |||||||||| |||||    
T  12866600 gttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaaaatggggaaaacccgtcaa 12866516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 487
Target Start/End: Original strand, 17153153 - 17153257
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||||||  |||||||||||| ||||  || ||  |||| ||||| | |||| |||||| |||||| | |||| ||||||   |||||||||    
T  17153153 ttttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaaatcggaaaaaactcaa 17153252  T
Q  483 actca 487  Q
    |||||    
T  17153253 actca 17153257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 348
Target Start/End: Complemental strand, 33420499 - 33420447
Alignment:
Q  296 tatgaaagttcttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    ||||| |||| ||||| || |||||||||||||  ||||||||||||||||||    
T  33420499 tatgatagtttttataacacgacaattatcaaataaaataacatgacatatca 33420447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 297 - 523
Target Start/End: Complemental strand, 15068777 - 15068552
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| ||||||||||  |||||||||||||    
T  15068777 atgaaaattcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaataaaaatatgacctttctacattcgg 15068678  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||| |||||| ||||| ||||||||||| |||||| ||||||| |||| |||||||||||||||||||| ||||||| | ||| || ||| | ||    
T  15068677 gtagggttcgggtatgggttcggggtggatacatatatcc-cgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccagac 15068579  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    || |||||||||||||||||| |||||    
T  15068578 ccagtcaaatcggggaaaacccgtcaa 15068552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 297 - 487
Target Start/End: Original strand, 40789487 - 40789677
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  40789487 atgaaagttcttatatcatgatagttatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacctttctacattcgg 40789586  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    | || |||||||||||||||| |||||| |||| ||||||  ||||||||||| |||||  |||| |||||| | ||||||| ||||||||    
T  40789587 gtagagtttgggtataggttcggggtgggtacatatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaaactca 40789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 298 - 523
Target Start/End: Original strand, 10297356 - 10297582
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||| ||| | ||||||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||  |||||||||| |||    
T  10297356 tgaaagttcttatatcatcacagtcatcaaaccaaataacatggcatatcattatcaatcccctcaacaaaaacaaaagtatgacctttctacattgggg 10297455  T
Q  398 g-agggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||||||| ||||| |||||||||| | |||| |||||| ||||||| |||| || ||||||||||||||||| ||||||| |||| ||||| | ||||    
T  10297456 gtagggttttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaattcacatccaaac 10297555  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    ||  | ||||| ||||||||| |||||    
T  10297556 ccaataaaatcagggaaaacccgtcaa 10297582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 318 - 506
Target Start/End: Complemental strand, 2183774 - 2183587
Alignment:
Q  318 caattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttc 417  Q
    |||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||||||  |||||||||||||| |||||||| ||||  ||||    
T  2183774 caattatcaaaccaaataacatg-catatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgagtatgagttc 2183676  T
Q  418 agggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaat 506  Q
     |||||| |||| |||||  | |||||  ||  ||||||||||||||||||||  |||||  |||||||| |||||||||| |||||||    
T  2183675 ggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaatccaaactcatacctaaacccagtcaaat 2183587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 318 - 424
Target Start/End: Complemental strand, 2190016 - 2189910
Alignment:
Q  318 caattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttc 417  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||  |||||||||||||| |||||||| |||| |||||    
T  2190016 caattatcaaaccaaataacatgacatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgagtatgggttc 2189917  T
Q  418 agggtgg 424  Q
     ||||||    
T  2189916 ggggtgg 2189910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 297 - 417
Target Start/End: Original strand, 8031038 - 8031156
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| |||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||| ||||   ||||||||||||    
T  8031038 atgaaatttcttatatcataacaattatcaaaccaaataacatggcatatcattatcaaccccctcaac-aaaacaaaaacatga-ccttctacattcgg 8031135  T
Q  397 ggagggtttgggtataggttc 417  Q
    | ||||||||||||| |||||    
T  8031136 gtagggtttgggtatgggttc 8031156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 297 - 412
Target Start/End: Complemental strand, 4594325 - 4594212
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||| | || |||||||||||| |    
T  4594325 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctc-gcaaaaa-aaaaacacgacttttctacattcag 4594228  T
Q  397 ggagggtttgggtata 412  Q
    | || |||||||||||    
T  4594227 gtagagtttgggtata 4594212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 376 - 523
Target Start/End: Complemental strand, 15173991 - 15173844
Alignment:
Q  376 atatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaa 475  Q
    |||||| ||||||||||||||| | |||||| ||||  ||||  |||||||||| |||||    |||||||||| |||||||||||||||||||| | ||    
T  15173991 atatgaattttctacattcgggtacggtttgagtatgagttcgaggtggatacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaa 15173892  T
Q  476 aactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||| || ||| |||||| |||||||| | ||||||| |||||    
T  15173891 aactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaa 15173844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 14507350 - 14507227
Alignment:
Q  361 tcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtat 460  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||  | ||||| ||||||||||| |||||  | ||||||||||  ||||| |||    
T  14507350 tcaacaaaaacaaaaatatgacttttctacattcgggta-ggtttggg--tgggttcggggtggatacatatatcacctttacccgtcccatacccatat 14507254  T
Q  461 tttgaaatcgaggaaaactcaaactca 487  Q
    |||  ||| ||||||||| ||||||||    
T  14507253 tttataattgaggaaaacccaaactca 14507227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 41429499 - 41429437
Alignment:
Q  241 ttgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  41429499 ttgattgttgaactaattttgttgacaattgttattgttttacatgtttaccctttatgaaag 41429437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 523
Target Start/End: Original strand, 32303044 - 32303185
Alignment:
Q  382 tttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactca 481  Q
    ||||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||| ||    
T  32303044 tttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 32303143  T
Q  482 aactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
     || || ||| |||||| |||||| ||||||||||| |||||    
T  32303144 tacccatacccaaacccagtcaaaacggggaaaacccgtcaa 32303185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 43724654 - 43724609
Alignment:
Q  231 attaagaaaattgattgttgtattaattttgttgacaattgttact 276  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43724654 attaagaaaattgattgttgtattaattttgttgacaattgctact 43724609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 3441879 - 3441927
Alignment:
Q  252 attaattttgttgacaattgttactgttttacatgtttatcctttatga 300  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  3441879 attaattttgttgacaattgttattgttttacatgtttaccctttatga 3441927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 14155552 - 14155656
Alignment:
Q  419 gggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacct 518  Q
    ||||||||| | ||||||||||||||| ||   ||||||| ||||||||||| | ||||| |||||||| ||| |||||| |||| | |||||||||||     
T  14155552 gggtggataaatatatcctcgttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaaccc 14155651  T
Q  519 gtcaa 523  Q
    |||||    
T  14155652 gtcaa 14155656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 2190059 - 2190017
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatg 340  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  2190059 tgaaagttcttatatcatgacaattatcaaaccaaataacatg 2190017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 390 - 516
Target Start/End: Original strand, 20399583 - 20399709
Alignment:
Q  390 cattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcaca 489  Q
    ||||||||  ||||||||| || ||||| |||||| ||   |||| | ||||||||||||  ||||||| |||||||||||  |||||| ||||| || |    
T  20399583 cattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaacccata 20399682  T
Q  490 cctaaaccccgtcaaatcggggaaaac 516  Q
    || |||||| |||||| ||||||||||    
T  20399683 cccaaacccagtcaaaacggggaaaac 20399709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 14186304 - 14186405
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||| ||  |||||||||||| |||||||||||  |||  ||||   |||||||| |||  ||||||| ||||||||||||| |||||||||    
T  14186304 ttttctacattcaggacgggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaaactcaa 14186403  T
Q  483 ac 484  Q
    ||    
T  14186404 ac 14186405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 38513440 - 38513501
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttat 291  Q
    |||||||||| |||||| | ||||||| ||||||||||||||||| ||||||||| ||||||    
T  38513440 aattaagaaagttgattttggtattaaatttgttgacaattgttattgttttacaagtttat 38513501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 29108926 - 29108786
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||| ||||||| ||||| |||||| |||| |||| | ||||||||||||  ||||| | |||| |||||| | ||||| ||     
T  29108926 ttttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccat 29108827  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| ||||||||||| |||||    
T  29108826 acccatacccaaacccagtcaaaacggggaaaacccgtcaa 29108786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 285
Target Start/End: Complemental strand, 12655694 - 12655639
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacat 285  Q
    |||||| ||| ||||||||||  |||||||||||||||||||||| ||||||||||    
T  12655694 aattaaaaaagttgattgttgagttaattttgttgacaattgttattgttttacat 12655639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 282
Target Start/End: Original strand, 23719344 - 23719395
Alignment:
Q  231 attaagaaaattgattgttgtattaattttgttgacaattgttactgtttta 282  Q
    ||||||||| |||||| |||||||||||||||||||||||| || |||||||    
T  23719344 attaagaaagttgattattgtattaattttgttgacaattgctattgtttta 23719395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 523
Target Start/End: Original strand, 27932422 - 27932537
Alignment:
Q  408 gtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatc 507  Q
    |||| ||||| |||||| |||  |||| | |||||| |||||  ||||||| ||||||||||| ||||||| || || || ||| |||||| |||||| |    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T
Q  508 ggggaaaacctgtcaa 523  Q
    |||||||||| |||||    
T  27932522 ggggaaaacccgtcaa 27932537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 295
Target Start/End: Original strand, 9615871 - 9615937
Alignment:
Q  229 aaattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctt 295  Q
    ||||||| ||| |||||| ||| ||||||||||||||||||||||| | |||||| |||||| ||||    
T  9615871 aaattaaaaaagttgattattgaattaattttgttgacaattgttattattttacttgtttaccctt 9615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 523
Target Start/End: Complemental strand, 29416260 - 29416151
Alignment:
Q  413 ggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcgggga 512  Q
    ||||| |||||| |||| ||||||||||||||| |||  ||| ||| |||| |||| ||| |||| ||||||||| ||| |||| | |||||| ||||||    
T  29416260 ggttcggggtgggtacatatatcctcgttacccatcctttactcgtgtttt-aaatagagaaaaagtcaaactcatacccaaactcagtcaaaacgggga 29416162  T
Q  513 aaacctgtcaa 523  Q
    ||||| |||||    
T  29416161 aaacccgtcaa 29416151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 297 - 330
Target Start/End: Complemental strand, 15174039 - 15174006
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaact 330  Q
    ||||||||||||||||||||||||||||||||||    
T  15174039 atgaaagttcttatatcatgacaattatcaaact 15174006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 523
Target Start/End: Complemental strand, 27777283 - 27777162
Alignment:
Q  402 gtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgt 501  Q
    |||||||||| ||||| |||||| |||   ||||   |||||| |||| ||||| || ||||||||||| | ||||||||||| || ||| |||||| ||    
T  27777283 gtttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagt 27777184  T
Q  502 caaatcggggaaaacctgtcaa 523  Q
    |||| ||| ||||||| |||||    
T  27777183 caaaacggagaaaacccgtcaa 27777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 523
Target Start/End: Original strand, 28345494 - 28345615
Alignment:
Q  402 gtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgt 501  Q
    |||||||||| ||||| |||||| | |  ||||||||||||||| ||| |||||||| ||||| ||||| | ||||  |||||  | ||| |||||| ||    
T  28345494 gtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcgggtaaaatccaaacctataccgaaacccagt 28345593  T
Q  502 caaatcggggaaaacctgtcaa 523  Q
    |||| |||| |||||| |||||    
T  28345594 caaagcgggaaaaacccgtcaa 28345615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 2183818 - 2183786
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaac 329  Q
    |||||||||||||||||||||||||||||||||    
T  2183818 atgaaagttcttatatcatgacaattatcaaac 2183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 484
Target Start/End: Original strand, 17469256 - 17469340
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||||||||||| ||||  |||||| |||  |||| | ||||||||||||  ||||||| ||||||||||| ||||||| |||||    
T  17469256 gggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 17469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 24927933 - 24928073
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | |||||||||||   ||||||| ||| || |||  ||||||| ||     
T  24927933 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccat 24928032  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| ||||||||||| |||||    
T  24928033 acccatacccaaacccagtcaaaacggggaaaacccgtcaa 24928073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 523
Target Start/End: Original strand, 35215568 - 35215659
Alignment:
Q  431 atatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||| |||||||||||||   ||||||| ||||||||||| ||||||| |||| ||| ||| |||||| |||||| |||| |||||| |||||    
T  35215568 atatactcgttacccgtctcatacccgtgttttgaaatcg-ggaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccggtcaa 35215659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 517
Target Start/End: Original strand, 14687402 - 14687517
Alignment:
Q  402 gtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgt 501  Q
    |||||||||| ||||| ||||||||||| ||||||  ||| | |||||  |||| || ||||||||||| ||||||| ||||  || ||| ||||||  |    
T  14687402 gtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaat 14687501  T
Q  502 caaatcggggaaaacc 517  Q
    ||||  ||||||||||    
T  14687502 caaagtggggaaaacc 14687517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 17220654 - 17220689
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17220654 catgacaattatcaaacaaaataacatgacatatca 17220689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 27932350 - 27932385
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27932350 catgacaattatcaaacaaaataacatgacatatca 27932385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 505
Target Start/End: Original strand, 29918591 - 29918713
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  ||||||| |||| | ||| |||||| |||| ||||| | ||||||||| | ||||  || ||||||||||| | |||||||||    
T  29918591 ttttttacatttgggacgggtttgtgtatggtttcggggtgggtacatatatctttgttacccgttctgtacatgtgttttgaaatcgggaaaaactcaa 29918690  T
Q  483 actcacacctaaaccccgtcaaa 505  Q
    ||||| ||| ||| || ||||||    
T  29918691 actcatacccaaaaccagtcaaa 29918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 347
Target Start/End: Complemental strand, 39445719 - 39445685
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatc 347  Q
    ||||||||||||||||| |||||||||||||||||    
T  39445719 catgacaattatcaaacaaaataacatgacatatc 39445685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 523
Target Start/End: Complemental strand, 5858701 - 5858616
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| |||| |||||| | ||||| ||||| || ||| ||||||  ||||| ||||||||||| |||||    
T  5858701 cgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaa 5858616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 9642455 - 9642354
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||| || |||| ||||| || |||||| | ||| || ||||||||||||  ||||||| ||||||||||| ||||||| |||    
T  9642455 ttttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 9642356  T
Q  483 ac 484  Q
    ||    
T  9642355 ac 9642354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 30481525 - 30481421
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| ||||||||||  | |||||||||| ||||| |||||| |||  |||||||| |||| ||||   ||| ||||||||||||||  | ||||| |||    
T  30481525 ttttttacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaa 30481426  T
Q  483 actca 487  Q
    |||||    
T  30481425 actca 30481421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 45236049 - 45236189
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||| ||| ||| ||||| |||||| |||  |||| | | ||||||||||  ||||||| ||||||||||  ||||||||||     
T  45236049 ttttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcagggaaaactcat 45236148  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||  |||| | |||||| ||||||||||| |||||    
T  45236149 acccatactcaaactcagtcaaaacggggaaaacccgtcaa 45236189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 1e-64; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 297 - 506
Target Start/End: Original strand, 31425911 - 31426120
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  31425911 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacctttctacattcgg 31426010  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||||||||  |||| ||||||||||| |||||| |||||||||||   |||||||||||| |||||| ||||||| |||||  | ||| ||||    
T  31426011 gtagggtttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaaccaataccaaaac 31426110  T
Q  497 cccgtcaaat 506  Q
    || |||||||    
T  31426111 ccagtcaaat 31426120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 297 - 511
Target Start/End: Original strand, 18683877 - 18684091
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||  | |||||||||||    
T  18683877 atgaaaattcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaacaaaaatatgacctatctacattcgg 18683976  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||||||||||||| |||||  |||||||||| ||||||  ||||||||||| |||||||||||||||||||| ||||||| | ||| || ||| ||||    
T  18683977 gtagggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccaaac 18684076  T
Q  497 cccgtcaaatcgggg 511  Q
    |  ||||||||||||    
T  18684077 ctagtcaaatcgggg 18684091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 300 - 470
Target Start/End: Original strand, 32546098 - 32546268
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgggga 399  Q
    ||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |    
T  32546098 aaagttcttatatcatgacaattaataaaccaaataacatggcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggta 32546197  T
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    |||||||||||| ||||| |||||| |||| |||||| |||||||||| | ||||||||||||||||||||    
T  32546198 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcg 32546268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 297 - 515
Target Start/End: Original strand, 27063046 - 27063259
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||   || ||||||||||| |||||| |||| ||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||    
T  27063046 atgaaagttcttatat---gagaattatcaaaccaaataagatgagatatcattatcaaccccctaaa--aaaacaaaaatatgacttttctacattcgg 27063140  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||||||||  |||| |||||  |||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  27063141 gtagggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcatacccaaac 27063240  T
Q  497 cccgtcaaatcggggaaaa 515  Q
    || |||||||| |||||||    
T  27063241 ccagtcaaatcagggaaaa 27063259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 297 - 469
Target Start/End: Original strand, 28309396 - 28309567
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||  |||||||||||||    
T  28309396 atgaatgttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaacccc-tcaataaaaacaaaaacatgacatttctacattcgg 28309494  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatc 469  Q
    | |||||||||||||  |||| |||| |||||| |||| | |||||||||||| |||||||||||||||||||    
T  28309495 gtagggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatc 28309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 300 - 510
Target Start/End: Complemental strand, 29015145 - 29014929
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgggga 399  Q
    |||||| ||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||| |    
T  29015145 aaagtttttatatcatgacaattatcaaaccaaataacatgccatataattatcaaccccctcaacaaaaacaaaaatatgacctttctacagtcgggta 29015046  T
Q  400 gggtttgggtataggttcagggtgg------atacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacaccta 493  Q
    ||||||| |||| ||||| ||||||      ||| | |||||| || || |||||| |||||||||||||||||||| | |||||||||||||| |||||    
T  29015045 gggtttgagtatgggttcggggtggatatatatatatatatccccgctatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactcataccta 29014946  T
Q  494 aaccccgtcaaatcggg 510  Q
    |||||  ||||||||||    
T  29014945 aacccaatcaaatcggg 29014929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 297 - 509
Target Start/End: Complemental strand, 30839324 - 30839112
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| | ||||||||| | ||||| || |||||||||||||||| ||| |||||||||||||||||||  |||||||||||||    
T  30839324 atgaaagttcttatatcatgatagttatcaaaccacataacttggcatatcattatcaaccacctaaacaaaaacaaaaatatgacctttctacattcgg 30839225  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | | |||||||| ||  |||| |||| |||||| |||||| |||||| |||||  ||||||||||||||||||  |||||||||||||||| ||| ||||    
T  30839224 gtaaggtttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaac 30839125  T
Q  497 cccgtcaaatcgg 509  Q
    || ||||||||||    
T  30839124 ccagtcaaatcgg 30839112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 298 - 515
Target Start/End: Complemental strand, 42908219 - 42908013
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||    
T  42908219 tgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatacgacctttctacattcggg 42908120  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacc 497  Q
     ||||||||||||           ||| |||| |||||| | |||||||||| |||||||||||||||||||| ||||||| |||||||| ||| |||||    
T  42908119 tagggtttgggta-----------tgggtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacc 42908031  T
Q  498 ccgtcaaatcggggaaaa 515  Q
    |  |||||| ||| ||||    
T  42908030 caatcaaattgggaaaaa 42908013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 297 - 523
Target Start/End: Original strand, 29157252 - 29157480
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||  ||||||||| |||    
T  29157252 atgaaagttcttatatcatgatagttatcaaaccaaataacatgacatattattaccaaccccctcaacaaaaacaaaaacatgacctttctacatccgg 29157351  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccg--tattttgaaatcgaggaaaactcaaactcacacctaa 494  Q
    | ||||||||||||  |||| |||||||||||| |||||| |||||||||||   ||||||  |||| |||||||| ||||||  ||||  || ||| ||    
T  29157352 gtagggtttgggtacgggtttagggtggatacatatatccccgttacccgtctcatacccgtatattatgaaatcggggaaaatccaaaaccatacccaa 29157451  T
Q  495 accccgtcaaatcggggaaaacctgtcaa 523  Q
    |||| ||||||| || ||||||| |||||    
T  29157452 accctgtcaaattggtgaaaacccgtcaa 29157480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 297 - 469
Target Start/End: Complemental strand, 37103317 - 37103145
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||| ||||  |||||||||||||    
T  37103317 atgaaagttattatatcatgacaattatcaaaccaaataacatggcatatcattatcaactccgtcaacaaaaacaaaaacatgacctttctacattcgg 37103218  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatc 469  Q
    | ||||||||| |||  |||| || ||| | || ||||||||||||||| ||| |||||||||||||||||||    
T  37103217 gtagggtttggatatgtgttcgggatgggtgcatatatcctcgttacccttcccgtacccgtattttgaaatc 37103145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 348 - 511
Target Start/End: Original strand, 22973342 - 22973505
Alignment:
Q  348 attatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgt 447  Q
    |||||||||| ||| |||||||||||||||||||  |||||||||||| | ||||||||||||| |||||  ||||| |||| |||||| | ||||||||    
T  22973342 attatcaacctccttaacaaaaacaaaaatatgacatttctacattcgagtagggtttgggtatgggttcgaggtgggtacagatatccccattacccgt 22973441  T
Q  448 ccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcgggg 511  Q
    || |||||||||||||||||||| ||||||| ||||| || ||| |||||| ||||||||||||    
T  22973442 cccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccagtcaaatcgggg 22973505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 297 - 511
Target Start/End: Original strand, 43218186 - 43218400
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||||||||||||| |||| | ||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||| | ||  ||| |||||| ||    
T  43218186 atgaaagttcttatattatgatagttatcaaaccaaataacatgtcatatcattatcaactccctcaacaaaaacaaaaacacgacctttttacatttgg 43218285  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
      |||||||||||||  |||| |||||  |||| |||||  |||||||||||| | |||  |||| |||||| | ||||||| ||||| || ||| ||||    
T  43218286 ctagggtttgggtatgagttcggggtgagtacatatatcgccgttacccgtcccgcacctatattatgaaattggggaaaacccaaacccatacccaaac 43218385  T
Q  497 cccgtcaaatcgggg 511  Q
    || ||||||||||||    
T  43218386 ccagtcaaatcgggg 43218400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 470
Target Start/End: Original strand, 21750689 - 21750858
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||    |||  |||||| |||||     
T  21750689 atgaaagttcatatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaaaaaaaaaaaa----tgacctttctagattcga 21750784  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    | |||||||||||||  ||||  ||||| |||| |||||| ||| |||||||   || ||||||||||||||||    
T  21750785 gtagggtttgggtatgagttcgaggtgggtacatatatccccgtcacccgtctcatatccgtattttgaaatcg 21750858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 343 - 505
Target Start/End: Complemental strand, 44845278 - 44845117
Alignment:
Q  343 atatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgtta 442  Q
    ||||||||||| ||||| |||||||||||||||  ||||  |||||||||||||| |||||||| |||| ||||| |||||| || | |||||||| |||    
T  44845278 atatcattatcgacccc-tcaacaaaaacaaaagcatgacctttctacattcgggcagggtttgtgtatgggttcggggtgggtaaatatatcctcatta 44845180  T
Q  443 cccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaa 505  Q
     |||||| ||||||||||| |||||||| ||||||| ||||| || ||| |||| | ||||||    
T  44845179 accgtcccgtacccgtattatgaaatcggggaaaacccaaacccataccaaaactcagtcaaa 44845117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 297 - 507
Target Start/End: Original strand, 2471898 - 2472096
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||| |||||||||||||||| | ||||||||| ||||||||||| | |||||||||||||||||||||||||| || || |  |  |||||||||||||    
T  2471898 atgagagttcttatatcatgatagttatcaaaccaaataacatgatacatcattatcaaccccctcaacaaaaataagaacaccacctttctacattcgg 2471997  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||||||||||||| |||||   |||||| |         |||||||||||  ||||||||||| ||||||||   |||||||||||||| ||| ||||    
T  2471998 gtagggtttgggtatgggttc---gtggatcc---------cgttacccgtctagtacccgtattatgaaatcggaaaaaactcaaactcatacccaaac 2472085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 27062454 - 27062375
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaa 376  Q
    |||||| |||||||||||| | ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  27062454 atgaaaattcttatatcataataattatcaaaccaaataacatgatatatcattatcaatcccctcaacaaaaacaaaaa 27062375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 405 - 523
Target Start/End: Original strand, 39317006 - 39317124
Alignment:
Q  405 tgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaa 504  Q
    |||||||  ||||||| |||||||| |||| | || |||||||||  ||||||| |||||||||||||||||||||| ||||| | | |||||| |||||    
T  39317006 tgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaa 39317105  T
Q  505 atcggggaaaacctgtcaa 523  Q
    | ||||||||||| |||||    
T  39317106 aacggggaaaacccgtcaa 39317124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 45870474 - 45870398
Alignment:
Q  227 gaaaattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| || |||||||||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||||    
T  45870474 gaaaattaaggaagttgattgttgaattaattttgttggcaattgtcattgttttacatgtttatcctttaagaaag 45870398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 356
Target Start/End: Original strand, 22962468 - 22962526
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaac 356  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  22962468 tgaaagttcttatatcatgacaattatcaaatcaaataacatggcatatcattatcaac 22962526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 403 - 523
Target Start/End: Original strand, 30650640 - 30650760
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtc 502  Q
    ||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| || | |||||||||| || || |||||||||| |||    
T  30650640 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagtc 30650739  T
Q  503 aaatcggggaaaacctgtcaa 523  Q
    ||| ||||||||||| |||||    
T  30650740 aaaacggggaaaacccgtcaa 30650760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 384 - 515
Target Start/End: Original strand, 27063324 - 27063455
Alignment:
Q  384 tttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    |||||||||||||| |||||| ||||||  |||| |||||| |||| |||| | |||||||||||| ||||||||||| | |||||| |||||||  | |    
T  27063324 tttctacattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccgaga 27063423  T
Q  484 ctcacacctaaaccccgtcaaatcggggaaaa 515  Q
    | || ||| |||||| ||||||| ||| ||||    
T  27063424 cccatacccaaacccagtcaaattgggaaaaa 27063455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 4909701 - 4909627
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgtt-actgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| || ||||||| |||||||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  4909701 aattaagaaagttaattgttgaattaattttgctgacaattgttaattgttttacatgtttaccctttatgaaag 4909627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 517
Target Start/End: Original strand, 3157089 - 3157206
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||||||||| | |||| |||  |||||| ||||| ||||||  ||||| ||||||||||||| |||||||  |||| || ||| |||||      
T  3157089 gggtttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaa 3157188  T
Q  500 gtcaaatcggggaaaacc 517  Q
    |||||| |||||||||||    
T  3157189 gtcaaagcggggaaaacc 3157206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 405 - 523
Target Start/End: Original strand, 10072477 - 10072595
Alignment:
Q  405 tgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaa 504  Q
    ||||||| ||||| |||||| |||  |||| | |||||||||| |  ||||||| ||||||||||| ||||||| || || || ||| |||||| |||||    
T  10072477 tgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaa 10072576  T
Q  505 atcggggaaaacctgtcaa 523  Q
    | ||||||||||| |||||    
T  10072577 aacggggaaaacccgtcaa 10072595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 517
Target Start/End: Original strand, 12980383 - 12980500
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| ||||| |||||| |||  |||| | | ||||||||||  ||||||| ||||||||||| |||||||  |||| || ||| ||||||     
T  12980383 gggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaaccca 12980482  T
Q  500 gtcaaatcggggaaaacc 517  Q
    ||||||  ||||||||||    
T  12980483 gtcaaaatggggaaaacc 12980500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 38438442 - 38438507
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctt 295  Q
    |||| |||||||||||||||| ||||||||||| |||| || ||| |||| |||||||||||||||    
T  38438442 aattgagaaaattgattgttgaattaattttgtagacagtttttattgttatacatgtttatcctt 38438507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 16866158 - 16866298
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | |||||| |||||  ||||||| |||||| |||| ||||||| ||     
T  16866158 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaacccat 16866257  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || | | |||||| |||||| ||||||||||| |||||    
T  16866258 acccataaccaaacccagtcaaaacggggaaaacccgtcaa 16866298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 27850493 - 27850441
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcat 349  Q
    ||||||||| ||||| || |||||||||||||| |||||||||||||||||||    
T  27850493 atgaaagtttttataacacgacaattatcaaacaaaataacatgacatatcat 27850441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 515
Target Start/End: Original strand, 7780014 - 7780129
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||||||||| |||||| |||  |||| | | ||| ||||||  ||||||| |||||| |||| ||||||| || || || ||| ||||||     
T  7780014 gggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 7780113  T
Q  500 gtcaaatcggggaaaa 515  Q
    |||||| |||||||||    
T  7780114 gtcaaaacggggaaaa 7780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 491
Target Start/End: Complemental strand, 18825959 - 18825868
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacc 491  Q
    |||||||||||  ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||||||||||| ||||||| ||||| ||||||    
T  18825959 gggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacacc 18825868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 478
Target Start/End: Complemental strand, 27850430 - 27850335
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    |||||||||||||||  |||||||||||| ||||| || ||| |||  |||  | ||||||||||||  ||||||| ||||||||||| |||||||    
T  27850430 ttttctacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 27850335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 517
Target Start/End: Original strand, 35074458 - 35074593
Alignment:
Q  382 tttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactca 481  Q
    ||||| |||||| |||  |||||||||||| ||||| || ||| |||  |||| | ||||||||||||  ||||||| |||| | |||| ||||||| ||    
T  35074458 tttttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaaccca 35074557  T
Q  482 aactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
     || || ||| |||||| |||||| |||||||||||    
T  35074558 tacccatacccaaacccagtcaaaacggggaaaacc 35074593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 438 - 517
Target Start/End: Original strand, 37218049 - 37218128
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    |||||||||||| ||||| || ||||||||| |   |||||||||||||| ||| |||||| |||||| |||||||||||    
T  37218049 cgttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacc 37218128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 10990933 - 10990871
Alignment:
Q  415 ttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaa 477  Q
    ||||||||||||||  ||||||   |||||||||| |||||||||||||||||||| ||||||    
T  10990933 ttcagggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 517
Target Start/End: Complemental strand, 45885845 - 45885735
Alignment:
Q  407 ggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaat 506  Q
    ||||| ||||| |||||| |||  |||| || |||||||||||  ||||||| |||||| |||| |||||||||| || || ||| |||||| ||||||     
T  45885845 ggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaa 45885746  T
Q  507 cggggaaaacc 517  Q
    ||| |||||||    
T  45885745 cggagaaaacc 45885735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 13751897 - 13751837
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgttta 290  Q
    |||||||||| || ||||||| ||||||||||||  ||||| ||| |||||||||||||||    
T  13751897 aattaagaaagttaattgttgaattaattttgttagcaattattattgttttacatgttta 13751837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 18125332 - 18125192
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  ||||||||||||  |||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| | ||||| ||     
T  18125332 ttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccat 18125233  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||| ||  |||||| |||||| ||||||||||| |||||    
T  18125232 actcatacacaaacccagtcaaaacggggaaaacccgtcaa 18125192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 21702648 - 21702780
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  ||||| |||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||| ||     
T  21702648 ttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 21702747  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    ||||| ||| |||||| |||||| |||| ||||    
T  21702748 actcatacccaaacccagtcaaaacgggaaaaa 21702780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 517
Target Start/End: Original strand, 45380094 - 45380230
Alignment:
Q  381 atttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactc 480  Q
    |||||| |||||| |||  | |||| ||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||||||||||||||| | ||||| |    
T  45380094 atttttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaaccc 45380193  T
Q  481 aaactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    | || || | | |||||| |||||| | |||||||||    
T  45380194 atacccatatccaaacccagtcaaaacagggaaaacc 45380230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 3227097 - 3227062
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3227097 catgacaattatcaaacaaaataacatgacatatca 3227062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 17885407 - 17885442
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17885407 catgacaattatcaaacaaaataacatgacatatca 17885442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 37182217 - 37182252
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37182217 catgacaattatcaaacaaaataacatgacatatca 37182252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 38139944 - 38139909
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  38139944 catgacaattatcaaacaaaataacatgacatatca 38139909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 39316937 - 39316972
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  39316937 catgacaattatcaaacaaaataacatgacatatca 39316972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 44658600 - 44658565
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44658600 catgacaattatcaaacaaaataacatgacatatca 44658565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 344
Target Start/End: Complemental strand, 44845364 - 44845317
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacat 344  Q
    ||||||||||||||||||| | | ||||||||| ||||||||||||||    
T  44845364 atgaaagttcttatatcataatagttatcaaaccaaataacatgacat 44845317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 523
Target Start/End: Original strand, 37182321 - 37182403
Alignment:
Q  441 tacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||  ||||||| ||||||| |||  |||||| || ||||| ||| |||||| |||||| ||||||||||| |||||    
T  37182321 tacccgtcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaa 37182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 517
Target Start/End: Original strand, 43507458 - 43507568
Alignment:
Q  407 ggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaat 506  Q
    ||||| |||||||||||| | |  |||| | |||||||||||   ||||| | ||||||||||| ||||||| || ||| | ||| |||||| ||||||     
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaa 43507557  T
Q  507 cggggaaaacc 517  Q
    |||||||||||    
T  43507558 cggggaaaacc 43507568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 448
Target Start/End: Original strand, 3774058 - 3774123
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtc 448  Q
    ||||||| |||||||  || |||| |||| |||||||||||| |||  ||||||||||||||||||    
T  3774058 ttttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcctcgttacccgtc 3774123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 19440118 - 19440013
Alignment:
Q  379 tgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    |||||||| ||||||||||  |||||||||||| |||||   |||| |||| |||||| | |||||| |||   |||||| |||| |||||  |||||||    
T  19440118 tgatttttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttcaaatcagggaaaac 19440019  T
Q  479 tcaaac 484  Q
    ||||||    
T  19440018 tcaaac 19440013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 23475371 - 23475266
Alignment:
Q  379 tgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    |||||||| ||||||||||  |||||||||||| |||||   |||| |||| |||||| | |||||| |||   |||||| ||||||||||| | |||||    
T  23475371 tgatttttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcgggaaaaac 23475272  T
Q  479 tcaaac 484  Q
     |||||    
T  23475271 ccaaac 23475266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 487
Target Start/End: Original strand, 5377094 - 5377178
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    ||||||||| ||||| |||||| |||  |||| | | ||||||||||  |||| || ||||||||||| ||||||| ||||||||    
T  5377094 tttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactca 5377178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 483
Target Start/End: Original strand, 33841123 - 33841167
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||||    
T  33841123 gttacccgtcccatacccgtgttttgaaatcggggaaaactcaaa 33841167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 297 - 516
Target Start/End: Original strand, 45065153 - 45065372
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||||||| |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45065153 atgaaagttcgtatatcatgacaattatcaaaccaaataacatagcatatcattatcaaccccctcaacaaaaacaaaaatatgatatttctacattcgg 45065252  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||||||||  |||| || ||| |||| ||||||  ||||| ||||| ||||||||||||||||||||||||||||  ||||  | ||| ||||    
T  45065253 gtagggtttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaaac 45065352  T
Q  497 cccgtcaaatcggggaaaac 516  Q
    || ||||||| |||||||||    
T  45065353 ccagtcaaattggggaaaac 45065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 298 - 523
Target Start/End: Original strand, 30672868 - 30673091
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  30672868 tgaaagttcttatatcatgacaatcatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatatgacctttctacattcggg 30672967  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacc 497  Q
     |||||||||||||||||||  ||||  |||| |||||| | ||| |||||| ||||||||||||| ||||||  |||||  |||||||| ||| |||||    
T  30672968 tagggtttgggtataggttcgaggtg--tacatatatccccattatccgtcccgtacccgtattttaaaatcggagaaaatccaaactcatacccaaacc 30673065  T
Q  498 ccgtcaaatcggggaaaacctgtcaa 523  Q
    |  ||||||| ||||||||| |||||    
T  30673066 caatcaaatcagggaaaacccgtcaa 30673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 298 - 470
Target Start/End: Original strand, 21544484 - 21544656
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||    
T  21544484 tgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatatgacctttctaccttcggg 21544583  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
     ||||||||||||| ||||| |||||| |||| |||||| | ||||| |||| ||||||||||||||||||||    
T  21544584 tagggtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcg 21544656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 297 - 484
Target Start/End: Original strand, 29527717 - 29527903
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||| |||||||||||||||||| |||||  |||||||||||||    
T  29527717 atgaaagttcttatatcatgacaattatcaaatcaaataacatagcatatcattatcaactccctcaacaaaaacaaaa-tatgacctttctacattcgg 29527815  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
      ||||||||||||| ||||| |||||| |||| |||||| |||||||||||  |||||||||||||||||||| ||||||| |||||    
T  29527816 atagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaac 29527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 298 - 517
Target Start/End: Complemental strand, 31416120 - 31415902
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||||||  ||    
T  31416120 tgaaagttcttatatcatgacaattatcaaaccaactaacatggcatatcattatcaaccccctcaacaaaaataaaaatatgacctttctacatt-tgg 31416022  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacc 497  Q
     |||||||| || | ||||| |||||| |||| ||||||  |||| || ||| ||||||||||||||||||||  |||||  |||||| | |||||||||    
T  31416021 tagggtttgagtgtgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaatcggagaaaatccaaacttatacctaaacc 31415922  T
Q  498 ccgtcaaatcggggaaaacc 517  Q
    | ||||||||||||||||||    
T  31415921 cagtcaaatcggggaaaacc 31415902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 298 - 515
Target Start/End: Complemental strand, 41915175 - 41914969
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  41915175 tgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgtg 41915076  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacc 497  Q
     ||||||||||||           ||| |||| |||||| |||||||| ||| |||||| ||||||||||||| ||||||| |||||||| |||  ||||    
T  41915075 tagggtttgggta-----------tgggtacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaactcatacccgaacc 41914987  T
Q  498 ccgtcaaatcggggaaaa 515  Q
    | ||||||||||||||||    
T  41914986 cagtcaaatcggggaaaa 41914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 309 - 515
Target Start/End: Complemental strand, 1866727 - 1866522
Alignment:
Q  309 atatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttggg 408  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||  |||||||||||||| || |||||||    
T  1866727 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctaaacaaaaacaaaac-atgacctttctacattcgggtagagtttggg 1866629  T
Q  409 tataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcg 508  Q
    ||| ||||| ||||||||||| |||||| | |||||||||  |||||||||||||||||||| | ||||| || ||||| ||| | |||  |||||||||    
T  1866628 tatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcatacccagacctagtcaaatcg 1866529  T
Q  509 gggaaaa 515  Q
    |||||||    
T  1866528 gggaaaa 1866522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 297 - 470
Target Start/End: Complemental strand, 30266521 - 30266348
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| | ||  ||||||||||| |    
T  30266521 atgaaagttcttatatcatgatagttatcaaaccaaataacatgtcatatcattatcaaccctctcaacaaaaacaaaaacacgacctttctacattcag 30266422  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    | ||||||||||||| ||||| ||||||||||| |||||| |||||||||||| ||||||||||| ||||||||    
T  30266421 gtagggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcg 30266348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 297 - 470
Target Start/End: Original strand, 30285667 - 30285840
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| | ||  ||||||||||| |    
T  30285667 atgaaagttcttatatcatgatagttatcaaaccaaataacatgtcatatcattatcaaccctctcaacaaaaacaaaaacacgacctttctacattcag 30285766  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    | ||||||||||||| ||||| ||||||||||| |||||| |||||||||||| ||||||||||| ||||||||    
T  30285767 gtagggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcg 30285840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 298 - 445
Target Start/End: Original strand, 568322 - 568469
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||  ||||||||||||||    
T  568322 tgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcactatcaacccccttaacaaaaacaaaaatatgacctttctacattcggg 568421  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttaccc 445  Q
     | ||||||||||| ||||| |||||| |||| |||||| | ||||||    
T  568422 taaggtttgggtatgggttcggggtgggtacatatatccccattaccc 568469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 299 - 484
Target Start/End: Complemental strand, 10574614 - 10574423
Alignment:
Q  299 gaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaaca------aaaacaaaaatatgatttttctacat 392  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||      |||||||||| ||||| |||||||||    
T  10574614 gaaagttcttatatcatgatagttatcaaaccaaataacatgacatatcattatcaacctcctcaacacaaataaaaacaaaaacatgatctttctacat 10574515  T
Q  393 tcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    ||||| |||||||||||||  |||| ||| || |||| |||||| |||||||||||| ||||| ||||| |||||||| |||||| ||||||    
T  10574514 tcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaac 10574423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 297 - 523
Target Start/End: Original strand, 18423494 - 18423720
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||| |||||||| || | ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||  |||||||||||||    
T  18423494 atgaaagtttttatatcaagatagttatcaaaccaaataacatgacatatcattatcaattccctcaacaaaaacaaaaacatgacctttctacattcgg 18423593  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||||||| ||||| ||||| || ||  |||| ||||||||||||||||||| ||| ||||||| |||||| |   ||||| | |||| | ||  ||||    
T  18423594 gtagggtttaggtatgggttcgggatgagtacatatatcctcgttacccgtcccgtatccgtattatgaaattggaaaaaacccgaacttatactcaaac 18423693  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    ||  |||||| ||||||||||||||||    
T  18423694 ccaatcaaataggggaaaacctgtcaa 18423720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 298 - 424
Target Start/End: Original strand, 11172874 - 11173000
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||||||| |||||||||  ||||||||||||||    
T  11172874 tgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaacctccttaacaaaaactaaaatatgacctttctacattcggg 11172973  T
Q  398 gagggtttgggtataggttcagggtgg 424  Q
     ||||||||||||| ||||| ||||||    
T  11172974 aagggtttgggtatgggttcggggtgg 11173000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 300 - 511
Target Start/End: Original strand, 47103640 - 47103856
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctc-----aacaaaaacaaaaatatgatttttctacattc 394  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||| || |      || ||||| ||||||||| | || ||||||||    
T  47103640 aaagttcttatatcatgccaattatcaaaccaaataacataacatatctttatcaactccttacaaaaaaaaaaaaaaaaaatatggtcttcctacattc 47103739  T
Q  395 ggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaa 494  Q
    ||| ||||||||||||| ||||| |||||| |||| |||||| ||||||||| || |||||||||||||||||| | ||||||| ||||| || ||  ||    
T  47103740 gggtagggtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccatacaaaa 47103839  T
Q  495 accccgtcaaatcgggg 511  Q
    |||| ||||||||||||    
T  47103840 acccagtcaaatcgggg 47103856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 297 - 484
Target Start/End: Original strand, 31782519 - 31782704
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||  | |||||||||||||| |  ||||| ||||| |    
T  31782519 atgaaagttcttatatcatgacaattatcaaaccaaataagatggcataccattatcaaccccct--aaaaaaacaaaaatataacctttctgcattcag 31782616  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    | | |||||||||||  |||  |||||| |||| |||||| ||||||| || | |||||||||||||||||||| ||||||| |||||    
T  31782617 gtaaggtttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaac 31782704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 307 - 410
Target Start/End: Complemental strand, 16216834 - 16216731
Alignment:
Q  307 ttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttg 406  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||    
T  16216834 ttatatcatgataattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctacattcgggtagggtttg 16216735  T
Q  407 ggta 410  Q
    ||||    
T  16216734 ggta 16216731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 331 - 509
Target Start/End: Complemental strand, 14606081 - 14605904
Alignment:
Q  331 aaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaa 430  Q
    |||||||||| ||||||||||||||| |||| || ||||||||||||||||  ||||||||||| || || |||||||||| ||||| |||||| ||||     
T  14606081 aaataacatggcatatcattatcaactccctaaa-aaaaacaaaaatatgacatttctacattcaggtagagtttgggtatgggttcggggtgggtacat 14605983  T
Q  431 atatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcgg 509  Q
    ||||||  ||||||||||  ||||||||||||||||||||  |||||| ||||| || ||| |||| | ||||||||||    
T  14605982 atatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaatcgg 14605904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 297 - 447
Target Start/End: Original strand, 24637098 - 24637246
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||| ||||   |||||||||| |    
T  24637098 atgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccct-aaaaaaaacaaaaacatga-ccttctacattcag 24637195  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgt 447  Q
    | ||||||||||||| ||| | ||||||  ||| |||||| ||||||||||    
T  24637196 gtagggtttgggtatgggtcctgggtgggcacatatatccccgttacccgt 24637246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 297 - 523
Target Start/End: Complemental strand, 15733709 - 15733491
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||        | ||||| ||||  |||||| |||| |    
T  15733709 atgaaagttctcatatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccct--------aaaaaaaaatgacatttctatattcag 15733618  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
      |||||||| |||   |||| |||||| |||| |||||  |||||||||||  ||||||||||||||||||||||||||||||| |  || ||| ||||    
T  15733617 ctagggtttgagtacgagttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaactcatatccatacccaaac 15733518  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    |   | |||||||||||||||| ||||    
T  15733517 ctaataaaatcggggaaaacctatcaa 15733491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 225 - 303
Target Start/End: Complemental strand, 30783931 - 30783853
Alignment:
Q  225 acgaaaattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  30783931 acgaaaattaagaaagttgattattgaattaattttgttgacaattgttattgttttatatgtttatcctttataaaag 30783853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 29236072 - 29236005
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatccttta 297  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||| ||||||| ||||    
T  29236072 aattaagaaaattaattgttgtattaattttgttgacaattgctattgttttacaagtttatctttta 29236005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 452 - 523
Target Start/End: Original strand, 37349171 - 37349242
Alignment:
Q  452 tacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||| ||||||||||| |||||||||||||||| ||| |||||| |||||| |||||||||||||||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaa 37349242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 24154437 - 24154363
Alignment:
Q  230 aattaagaaaattgatt-gttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| |||||| |||| |||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  24154437 aattaagaaagttgatttgttgaattaattttgctgacaattgttattgttttacatgtttaccctttatgaaag 24154363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 7325955 - 7326024
Alignment:
Q  234 aagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||| ||| |||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  7325955 aagaaagttggttgttgaattaattttgttgacaattgttattgttttacatatttaccctttatgaaag 7326024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 487
Target Start/End: Complemental strand, 12825548 - 12825462
Alignment:
Q  401 ggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    |||||||||||||||||||||||| |||  ||||   ||||||||||||  ||||||| ||||||||||| ||||||| ||||||||    
T  12825548 ggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactca 12825462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 45789235 - 45789312
Alignment:
Q  225 acgaaaattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    ||||||||||||||| ||||||||||  ||||||| |  ||||||||||| ||||||||||||||| ||||||||||||    
T  45789235 acgaaaattaagaaagttgattgttgagttaatttagc-gacaattgttattgttttacatgtttaccctttatgaaag 45789312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 523
Target Start/End: Complemental strand, 6382378 - 6382237
Alignment:
Q  382 tttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactca 481  Q
    ||||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| ||||  |||||| ||    
T  6382378 tttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaaccca 6382279  T
Q  482 aactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
     || || ||| |||||| |||||| ||||||||||| |||||    
T  6382278 tacccatacccaaacccagtcaaagcggggaaaacccgtcaa 6382237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 22129583 - 22129656
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| |||||||||| |||| |||||||||||||| ||||  ||||||||||||| |||||| |||||    
T  22129583 aattaagaaagttgattgttgaattagttttgttgacaattattaccattttacatgtttaccctttaggaaag 22129656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 7205395 - 7205328
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatccttta 297  Q
    ||||||||||| | |||||||||||||||||||||||||||  || ||||||||| ||||| ||||||    
T  7205395 aattaagaaaactaattgttgtattaattttgttgacaatttctattgttttacaagtttacccttta 7205328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 424
Target Start/End: Complemental strand, 15132262 - 15132195
Alignment:
Q  357 cccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtgg 424  Q
    |||||||||||||||||||||||||  |||||||||| ||| |||||||  |||| ||||||||||||    
T  15132262 cccctcaacaaaaacaaaaatatgacatttctacatttgggtagggtttatgtatgggttcagggtgg 15132195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 383 - 505
Target Start/End: Original strand, 26564821 - 26564943
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| |||| |||  |||||||||||| | ||| |||||| |||  |||| | ||||||||||||  ||||||  ||||||||||| ||||| |||||    
T  26564821 ttttctgcatttgggacgggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaa 26564920  T
Q  483 actcacacctaaaccccgtcaaa 505  Q
    ||||| ||| |||||| ||||||    
T  26564921 actcatacccaaacccagtcaaa 26564943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 382 - 515
Target Start/End: Original strand, 44317524 - 44317657
Alignment:
Q  382 tttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactca 481  Q
    ||||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||| ||    
T  44317524 tttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaaccca 44317623  T
Q  482 aactcacacctaaaccccgtcaaatcggggaaaa 515  Q
     || || ||| |||||| |||||| |||||||||    
T  44317624 tacccatacccaaacccagtcaaaacggggaaaa 44317657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 7608960 - 7609100
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||| ||     
T  7608960 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 7609059  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| ||| || |||||| ||||||||||| |||||    
T  7609060 acccatacccaaatccagtcaaaacggggaaaacccgtcaa 7609100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 517
Target Start/End: Original strand, 10302096 - 10302208
Alignment:
Q  405 tgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaa 504  Q
    ||||||| ||||| |||||| |||| ||| || |||||||||||   |||||||| |||||||||| |||||||  |||| || ||| ||||||  ||||    
T  10302096 tgggtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaa 10302195  T
Q  505 atcggggaaaacc 517  Q
    | |||||||||||    
T  10302196 aacggggaaaacc 10302208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 40420690 - 40420586
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||||||| |||||||||||||||||| | |||| ||   ||||| | ||||| ||||   || || |||||||||||| |||||||||||     
T  40420690 ttttctacattcggggtgggtttgggtataggttcggagtggctaggtatatctttgttactcgtctcatatccatattttgaaatcaaggaaaactcat 40420591  T
Q  483 actca 487  Q
    |||||    
T  40420590 actca 40420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 526
Target Start/End: Complemental strand, 4741296 - 4741179
Alignment:
Q  408 gtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatc 507  Q
    |||| ||||| |||||| |||  ||||||  |||| ||||||  ||||| | |||| ||||||||||||||||||||||| | | |||| | |||||| |    
T  4741296 gtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaa-c 4741198  T
Q  508 ggggaaaacctgtcaattt 526  Q
    ||||||||| |||||||||    
T  4741197 ggggaaaacttgtcaattt 4741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 1724415 - 1724314
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| ||||||||  |||||||||||| ||||| |||||| |||  ||||   ||||||||||||  ||||| | ||||||||||| ||||||| |||    
T  1724415 ttttctgcattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaa 1724316  T
Q  483 ac 484  Q
    ||    
T  1724315 ac 1724314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 487
Target Start/End: Original strand, 16575121 - 16575206
Alignment:
Q  402 gtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    |||||||||||||||| | |||| |||  |||||||||||| || ||| |||||||  |||| ||||||||||| || ||||||||    
T  16575121 gtttgggtataggttcggagtgggtacttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaatacccaaactca 16575206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 382 - 523
Target Start/End: Complemental strand, 31918664 - 31918523
Alignment:
Q  382 tttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactca 481  Q
    ||||| |||||| |||  |||||||||||| ||||| |||||| ||   |||| | | |||| |||||  ||||||| ||| || |||| ||||||| ||    
T  31918664 tttttttacatttgggacgggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaaccca 31918565  T
Q  482 aactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
     ||||| ||| |||||| |||||| ||||||||||| |||||    
T  31918564 tactcatacccaaacccagtcaaaacggggaaaacccgtcaa 31918523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 43309528 - 43309613
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| ||||||||||| | ||||| |||||||| ||  |||||| |||||| ||| ||||||| |||||    
T  43309528 cgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaa 43309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 47550458 - 47550326
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| |  |||||||||||  ||||||| |||||| |||| ||||||||||     
T  47550458 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcat 47550359  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    ||  | ||| |||||| ||||||  ||||||||    
T  47550358 acctatacccaaacccagtcaaaatggggaaaa 47550326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 497
Target Start/End: Original strand, 3737789 - 3737880
Alignment:
Q  406 gggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacc 497  Q
    |||||| ||||| || ||| |||| ||| |||||||||||||||  ||||||| ||||||||| | | ||||| | ||| ||||||||||||    
T  3737789 gggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccctaacccacacctaaacc 3737880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 526
Target Start/End: Complemental strand, 12505577 - 12505502
Alignment:
Q  452 tacccgtattttgaaatcgaggaaaactcaaactcaca-cctaaaccccgtcaaatcggggaaaacctgtcaattt 526  Q
    ||||||| ||||||||||| ||||||| |||||||| | |||||||||  ||||| ||| ||||||| ||||||||    
T  12505577 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaattt 12505502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 31752399 - 31752434
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  31752399 catgacaattatcaaacaaaataacatgacatatca 31752434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 42774704 - 42774739
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42774704 catgacaattatcaaacaaaataacatgacatatca 42774739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 47239537 - 47239502
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  47239537 catgacaattatcaaacaaaataacatgacatatca 47239502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 425755 - 425801
Alignment:
Q  302 agttcttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    |||| ||||| ||||||||||||||||| |||||||||| |||||||    
T  425755 agtttttataacatgacaattatcaaacaaaataacatggcatatca 425801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 523
Target Start/End: Original strand, 11028081 - 11028203
Alignment:
Q  401 ggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccg 500  Q
    |||||||||||  |||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| |||| ||||||| || || || ||| ||| || |    
T  11028081 ggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccag 11028180  T
Q  501 tcaaatcggggaaaacctgtcaa 523  Q
    ||||| ||| ||||||| |||||    
T  11028181 tcaaaacggagaaaacccgtcaa 11028203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 15016202 - 15016268
Alignment:
Q  225 acgaaaattaagaaaa-ttgattgttgtattaattttgttgacaattgttactgttttacatgttta 290  Q
    |||| |||||| |||| |||||||||  |||||||||||||| ||||||||  ||||||||||||||    
T  15016202 acgagaattaaaaaaagttgattgttaaattaattttgttgaaaattgttatcgttttacatgttta 15016268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 19534387 - 19534433
Alignment:
Q  302 agttcttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    |||| ||||| || |||||||||||||| ||||||||||||||||||    
T  19534387 agtttttataacacgacaattatcaaacaaaataacatgacatatca 19534433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 32585496 - 32585566
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    |||||||||||| |||||||||||| |||  |||| | ||||||| ||||  ||||||| |||||||||||    
T  32585496 gggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcg 32585566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 33095137 - 33095179
Alignment:
Q  228 aaaattaagaaaattgattgttgtattaattttgttgacaatt 270  Q
    |||||||||||| || |||||||||||||||||||||| ||||    
T  33095137 aaaattaagaaagttaattgttgtattaattttgttgagaatt 33095179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 37107343 - 37107389
Alignment:
Q  302 agttcttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    |||| ||||| |||| |||||||||||| ||||||||||||||||||    
T  37107343 agtttttataacatggcaattatcaaacaaaataacatgacatatca 37107389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 523
Target Start/End: Original strand, 36919132 - 36919253
Alignment:
Q  402 gtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgt 501  Q
    |||||||||| |||| ||| |||||||  |||||| |||||| |||||  ||| | | |||| || ||| |||||||||||||||| ||| |||||| ||    
T  36919132 gtttgggtatgggttaaggatggatacctatatccacgttactcgtcctatacacatgttttaaagtcggggaaaactcaaactcatacccaaacccagt 36919231  T
Q  502 caaatcggggaaaacctgtcaa 523  Q
     ||| || | |||||| |||||    
T  36919232 taaagcgagaaaaacccgtcaa 36919253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Original strand, 37349113 - 37349158
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatac 428  Q
    |||||| ||||||||  |||||||||||| ||||||||||||||||    
T  37349113 ttttctgcattcgggacgggtttgggtatgggttcagggtggatac 37349158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 487
Target Start/End: Original strand, 39375323 - 39375372
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    ||||||||||||  ||||||||||||||||||| ||||||  ||||||||    
T  39375323 cgttacccgtcctatacccgtattttgaaatcggggaaaagccaaactca 39375372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 440 - 484
Target Start/End: Original strand, 11173020 - 11173064
Alignment:
Q  440 ttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    ||||| |||| |||||||||||||||||||| ||||||| |||||    
T  11173020 ttacctgtcccgtacccgtattttgaaatcggggaaaacccaaac 11173064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 29035724 - 29035684
Alignment:
Q  307 ttatatcatgacaattatcaaactaaataacatgacatatc 347  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  29035724 ttataacatgacaattatcaaactaaataatatggcatatc 29035684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 29047857 - 29047817
Alignment:
Q  307 ttatatcatgacaattatcaaactaaataacatgacatatc 347  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  29047857 ttataacatgacaattatcaaactaaataatatggcatatc 29047817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 43893218 - 43893357
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  ||||||||||||   ||| ||||||||||  |||| | ||||||||||||  ||||||| ||| || |||| || |||| ||     
T  43893218 ttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgagatcg-gggaaacccat 43893316  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| ||||||||||| |||||    
T  43893317 acccatacccaaacccagtcaaaacggggaaaacccgtcaa 43893357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 123; Significance: 6e-63; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 297 - 523
Target Start/End: Original strand, 67647 - 67873
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |    
T  67647 atgaaagttcttatatcatgacaattatcaaatcaaataacatagcatatcattattaaccccctcaacaaaaacaaaaatatgacctttctacattcag 67746  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||||||||||| || |||||| |||| |||||| ||||| |||||| ||| ||||||||| |||||| ||||||  ||||| || ||  ||||    
T  67747 gtagggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaac 67846  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    || ||||||||||||||||||||||||    
T  67847 ccagtcaaatcggggaaaacctgtcaa 67873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 297 - 523
Target Start/End: Original strand, 75490 - 75716
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||||||  ||||||||||| |    
T  75490 atgaaagttcttatatcatgacaattatcaaatcaaataacatagcatatcattattaaccccctcaacaaaaacaaaaatatgacctttctacattcag 75589  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||||||||||| || |||||| |||| |||||| ||||| |||||| ||| ||||||||| |||||| ||||||  ||||| || ||  ||||    
T  75590 gtagggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaac 75689  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    || ||||||||||||||||||||||||    
T  75690 ccagtcaaatcggggaaaacctgtcaa 75716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 6e-63; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 297 - 483
Target Start/End: Complemental strand, 16237494 - 16237308
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  16237494 atgaaaattcctatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgg 16237395  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    | ||||||||||||| ||||| ||||   |||| |||||||||||||||||||  ||||||||||||||||||| ||||||| ||||    
T  16237394 gtagggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaa 16237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 300 - 468
Target Start/End: Complemental strand, 10450246 - 10450078
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgggga 399  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||  |||||||||||||| |    
T  10450246 aaagttcttatatcatgacaattattaaaccaaataacatgacatatcattataaaccccctcaacaaaaacaaaaacatgacctttctacattcgggta 10450147  T
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaat 468  Q
    ||||||||||||  |||| |||||| |||| ||||||  |||||||| || ||||||||||||| ||||    
T  10450146 gggtttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaat 10450078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 297 - 523
Target Start/End: Complemental strand, 19003844 - 19003630
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  19003844 atgaaaattcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaacaaaaatatgacctttctacattcgg 19003745  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||||||||            ||||||||||| |||||| ||||| ||||||  ||||||||||||| ||||| ||||||| | ||| || ||| ||||    
T  19003744 gtagggtttg------------gggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaac 19003657  T
Q  497 cccgtcaaatcggggaaaacctgtcaa 523  Q
    |  |||||||||||||||||| |||||    
T  19003656 ctagtcaaatcggggaaaacccgtcaa 19003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 341 - 506
Target Start/End: Complemental strand, 35070035 - 35069870
Alignment:
Q  341 acatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgt 440  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||| |||||| |||| ||||||  ||    
T  35070035 acatatcattatcaaccccctcaacaaaaacaaaaatatgatctttctacattcgggtagggtttgagtatgggttcggggtgggtacatatatccctgt 35069936  T
Q  441 tacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaat 506  Q
    ||||||||  ||||||||||| |||||||| |||||||||||||||| ||| ||| || |||||||    
T  35069935 tacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcatacccaaatccagtcaaat 35069870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 297 - 507
Target Start/End: Complemental strand, 12718955 - 12718751
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||      ||||  ||| |||||| ||    
T  12718955 atgaaagttcttatatcatgataattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaac------atgacctttttacatttgg 12718862  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcaca-cctaaa 495  Q
    | | ||||||||||| |||||||||||| |||| ||||   |||||||||||  |||| |||||| |||||||| ||||||  |||||||| | || |||    
T  12718861 gta-ggtttgggtatgggttcagggtgggtacatatatttccgttacccgtctcgtacacgtattatgaaatcggggaaaatccaaactcatacccaaaa 12718763  T
Q  496 ccccgtcaaatc 507  Q
    | ||||||||||    
T  12718762 ctccgtcaaatc 12718751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 297 - 411
Target Start/End: Original strand, 19892874 - 19892985
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    |||||||||||||||| |||||||||||| |    
T  19892874 atgaaatttcttatatcatgacaattatcaaaccaaataagatgacatatcattatcaaccccct---aaaaaacaaaaatatgagttttctacattcag 19892970  T
Q  397 ggagggtttgggtat 411  Q
    | ||||| |||||||    
T  19892971 gtagggtatgggtat 19892985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 297 - 397
Target Start/End: Original strand, 37032239 - 37032339
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| |||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  37032239 atgaaaattcttatatcatgatagttatcaaaccaaataacatgacatatcattatcaaccccatcaacaaaaacaaaaacatgacctttctacattcgg 37032338  T
Q  397 g 397  Q
    |    
T  37032339 g 37032339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 11643719 - 11643796
Alignment:
Q  225 acgaaaattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaa 302  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  11643719 acgagaattaagaaagttgattgttgaattaattttgttgacaattgttattgttttacatgtttaccctttatgaaa 11643796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 511
Target Start/End: Original strand, 23058452 - 23058579
Alignment:
Q  384 tttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    |||||| ||||||| ||||||||||||| ||||| |||||| |||  |||||| |||||||||||  |||| || ||||||||||||  |||||||||||    
T  23058452 tttctatattcgggtagggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaa 23058551  T
Q  484 ctcacacctaaaccccgtcaaatcgggg 511  Q
    | || ||  |||||| ||||||| ||||    
T  23058552 cccatactcaaacccagtcaaattgggg 23058579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 14500063 - 14499990
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||| | |||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  14500063 aattaagatagttgattgttgaattaattttgttgacaattattattgttttacatgtttaccctttaagaaag 14499990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 400 - 517
Target Start/End: Complemental strand, 36187307 - 36187190
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| |||||||||||| |||  |||| | ||||||||||||  ||||||| |||||| |||| ||||||| || || || ||| ||||||     
T  36187307 gggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 36187208  T
Q  500 gtcaaatcggggaaaacc 517  Q
    |||||| |||||||||||    
T  36187207 gtcaaaacggggaaaacc 36187190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 9982994 - 9982862
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| ||||||||  |||||||||||| ||||| |||||| |||  |||| |||||||||| |||  | ||||| ||||||||| | |||||| ||||    
T  9982994 ttttctgcattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaattcaa 9982895  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    ||||| ||| |||||| |||||| ||| |||||    
T  9982894 actcatacccaaacccagtcaaaacggagaaaa 9982862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 469
Target Start/End: Complemental strand, 48125787 - 48125701
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatc 469  Q
    ||||||||||||| |  | |||||||||| ||||| ||||||||||  ||||||||||||||||||| |||||||| |||| |||||    
T  48125787 ttttctacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 48125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 5181079 - 5181164
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||||||||||||||| ||||||| || || || |||||||||| ||||||  |||||||||| |||||    
T  5181079 cgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaa 5181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 9141458 - 9141385
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||| |||||||||| ||| ||||||||||||| ||||||||| |||||||||| |||| | ||||||||||    
T  9141458 aattaaaaaaattgattcttgaattaattttgttgccaattgttattgttttacatatttaccatttatgaaag 9141385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 21973292 - 21973219
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    ||||||||| ||||||||||| |||||||||||||||||| | |  ||||||| ||||||| ||||||||||||    
T  21973292 aattaagaatattgattgttgaattaattttgttgacaatcgatgttgttttaaatgtttaccctttatgaaag 21973219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 48024457 - 48024385
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaa 370  Q
    ||||||||| |||||||||||||||||||||||  ||||| ||| ||||| ||||||||| |||||||||||||    
T  48024457 atgaaagtttttatatcatgacaattatcaaac-caataatatgtcatataattatcaactccctcaacaaaaa 48024385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 49250877 - 49250737
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| |||||  |||||||||  |||| | | ||||||||||  ||||||| |||||| |||| ||||||||||     
T  49250877 ttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcat 49250778  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| ||| ||||||| |||||    
T  49250777 acccatacccaaacccagtcaaaacggagaaaacccgtcaa 49250737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 419 - 517
Target Start/End: Original strand, 13798259 - 13798357
Alignment:
Q  419 gggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    ||||||||| | ||||||||||||||| ||   ||||||| ||||||||||| | ||||| |||||||| ||| |||||| |||| | |||||||||||    
T  13798259 gggtggataaatatatcctcgttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaaacc 13798357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 29871389 - 29871249
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||||||  ||||||||||||  ||||||||||| |||  |||| |  |||||| ||||  ||||| | |||||||||||  |||||| |||    
T  29871389 ttttctacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaacccaa 29871290  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||| ||| ||||   |||||| || |||||||| |||||    
T  29871289 actcatacccaaacttagtcaaaacgaggaaaacccgtcaa 29871249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 523
Target Start/End: Complemental strand, 10778646 - 10778531
Alignment:
Q  408 gtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatc 507  Q
    |||| ||||| |||||||||   ||| || ||||||||||||  ||||||| ||||||||||| | |||||| ||||||| ||| |||||| |||||| |    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagc 10778547  T
Q  508 ggggaaaacctgtcaa 523  Q
    ||  |||||| |||||    
T  10778546 ggaaaaaacccgtcaa 10778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 17516327 - 17516385
Alignment:
Q  300 aaagttcttatatcat--gacaattatcaaactaaataacatgacatatcattatcaac 356  Q
    ||||||||||||||||  || | ||||||||| ||||||||||||||||||||||||||    
T  17516327 aaagttcttatatcatatgatagttatcaaaccaaataacatgacatatcattatcaac 17516385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 478
Target Start/End: Original strand, 29936401 - 29936496
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  |||||||||||||| |||| |||||||    
T  29936401 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaac 29936496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 383 - 517
Target Start/End: Original strand, 51421843 - 51421977
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||| |||| |  |||||||||||  ||||||| |||||| |||| | ||||| ||     
T  51421843 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccat 51421942  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    || || ||| |||||| ||||||  ||||||||||    
T  51421943 acccatacccaaacccagtcaaaatggggaaaacc 51421977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 323 - 376
Target Start/End: Original strand, 23058319 - 23058372
Alignment:
Q  323 atcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaa 376  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||| || |||||    
T  23058319 atcaaaccaaataacatgtcatatcattattaaccccctcaacaacaaaaaaaa 23058372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 24710887 - 24710972
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| |||||| |||| ||||||| || ||||| | | |||||| |||||| ||||||||||| |||||    
T  24710887 cgttacccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtcaa 24710972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 16408983 - 16409067
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||||  ||||||| ||||||||| | ||||||| || || || ||| |||||| |||||| ||||||||||| |||||    
T  16408983 gttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 16409067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 23058255 - 23058287
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaac 329  Q
    |||||||||||||||||||||||||||||||||    
T  23058255 atgaaagttcttatatcatgacaattatcaaac 23058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 41477056 - 41476952
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| | ||||||  |||||||||||| | ||| |||||| |||| |||||| ||||| |||||| |||| ||||||||  ||||||  ||||| |||    
T  41477056 ttttctgctttcgggacgggtttgggtatggattcggggtgggtacatatatccacgttatccgtcccgtactcgtattttccaatcgaaaaaaacccaa 41476957  T
Q  483 actca 487  Q
    |||||    
T  41476956 actca 41476952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 523
Target Start/End: Complemental strand, 44615523 - 44615439
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||||  ||||||| |||| |||||  ||||||| |||||||| ||| |||||| |||||| |||| |||||| |||||    
T  44615523 gttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaa 44615439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 44793046 - 44793130
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||||  ||||||| |||| |||||  ||||||| |||||||| ||| |||||| |||||| |||| |||||| |||||    
T  44793046 gttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtcaaaacgggaaaaacccgtcaa 44793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 5180983 - 5181018
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5180983 catgacaattatcaaacaaaataacatgacatatca 5181018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 17092110 - 17092075
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17092110 catgacaattatcaaacaaaataacatgacatatca 17092075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 17134885 - 17134920
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17134885 catgacaattatcaaacaaaataacatgacatatca 17134920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 18354231 - 18354196
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  18354231 catgacaattatcaaacaaaataacatgacatatca 18354196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 481
Target Start/End: Original strand, 28297918 - 28298017
Alignment:
Q  382 tttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactca 481  Q
    ||||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||||||    
T  28297918 tttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactca 28298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 505
Target Start/End: Complemental strand, 42707886 - 42707819
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaa 505  Q
    ||||||||||||  ||||||| |||||||||||  ||||||||| ||||| ||| |||||| ||||||    
T  42707886 cgttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 42707981 - 42707946
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42707981 catgacaattatcaaacaaaataacatgacatatca 42707946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 50426806 - 50426771
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  50426806 catgacaattatcaaacaaaataacatgacatatca 50426771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 523
Target Start/End: Original strand, 34085242 - 34085360
Alignment:
Q  405 tgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaa 504  Q
    ||||||| ||||| |||||| |||| ||| || |||||||| |||  ||| ||| ||||||||||| | ||||| |||||||| | |  ||||| |||||    
T  34085242 tgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaa 34085341  T
Q  505 atcggggaaaacctgtcaa 523  Q
    | ||| ||||||| |||||    
T  34085342 agcggagaaaacccgtcaa 34085360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 284
Target Start/End: Complemental strand, 51624018 - 51623964
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttaca 284  Q
    ||||| |||| ||||||||| |||||||||||||||||||  ||| |||||||||    
T  51624018 aattatgaaagttgattgttttattaattttgttgacaatcattattgttttaca 51623964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 13390353 - 13390386
Alignment:
Q  315 tgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||| ||||||||||||||||||    
T  13390353 tgacaattatcaaacaaaataacatgacatatca 13390386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 516
Target Start/End: Original strand, 39616333 - 39616410
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaac 516  Q
    |||||||||||  ||||||| ||||||||| | ||||||| || ||||| ||| |||| | |||||| ||||||||||    
T  39616333 gttacccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaac 39616410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 484
Target Start/End: Original strand, 8880450 - 8880534
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||||||||||| ||| ||||||||||||   ||||| | ||||| |||| |||| ||| |||| ||||||| |||||| |||||    
T  8880450 gggtttgggtatgggtccagggtggatacctttatccccattacctgtcctgtactcgtgtttttaaatcgaagaaaacccaaac 8880534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 12494995 - 12495127
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    ||||||||||| |||  |||||||||||| |||||  ||||| |||  |||| | |||||| |||||  || |||| ||||||||||| | |||||  ||    
T  12494995 ttttctacatttgggacgggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaa 12495094  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    || || ||| |||||| ||||||  ||||||||    
T  12495095 acccataccgaaacccagtcaaagtggggaaaa 12495127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 313 - 345
Target Start/End: Original strand, 16408884 - 16408916
Alignment:
Q  313 catgacaattatcaaactaaataacatgacata 345  Q
    ||||||||||||||||| |||||||||||||||    
T  16408884 catgacaattatcaaacaaaataacatgacata 16408916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 19572616 - 19572476
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||| || |||| ||||| |||||| |||  |||| | ||||||| ||||  ||||||| ||||||||||| | ||||| ||     
T  19572616 ttttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccat 19572517  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| ||||||  |||||||||| |||||    
T  19572516 acccatacccaaacccagtcaaaatggggaaaacccgtcaa 19572476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 23490875 - 23490735
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||| ||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||| ||     
T  23490875 ttttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccat 23490776  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| | || |||||| |||||    
T  23490775 acccatacccaaacccagtcaaaacaggaaaaacccgtcaa 23490735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 297 - 484
Target Start/End: Complemental strand, 38342708 - 38342522
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||  |||||||||||||    
T  38342708 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaacccc-tcaacaaaaacaaaaacacgacctttctacattcgg 38342610  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    | ||||||||||||| ||||| |||||| |||| |||||| |||||||||||| ||| ||||||||| |||||| |||||||||||||    
T  38342609 gtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaac 38342522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 308 - 470
Target Start/End: Original strand, 3547076 - 3547238
Alignment:
Q  308 tatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgg 407  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  3547076 tatatcatgacaattatcaaaccaaataacatagcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttgg 3547175  T
Q  408 gtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
     ||| ||||| |||||| |||| |||||  |||||||||||| ||||||||||||||||||||    
T  3547176 atatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcg 3547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 297 - 484
Target Start/End: Original strand, 43371455 - 43371639
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||   ||  |||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  43371455 atgaaagttcttatatcatgacaattatcaaaccaaata---tgggatatcattttcaaccccctcaacaaaaacaaaaatatgacatttctacattcgg 43371551  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    | |||||||||||||  |||  |||||| |||| |||||| |||||||||||| ||||||||||||| |||||| |||||||||||||    
T  43371552 gtagggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaac 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 297 - 487
Target Start/End: Original strand, 30978824 - 30979014
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctc--aacaaaaacaaaaatatgatttttctacattc 394  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||  || ||||| ||||| ||||  ||||||||||     
T  30978824 atgaaagttcttatatcatgacaattatcaaaccaaataacatgacatataattatcaaacccctcataaaaaaaaaaaaaaaatgacctttctacattt 30978923  T
Q  395 ggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    ||| ||||||||||||| ||||| ||||||||||| |||||||||||| || ||| |||||||||||||||||||| | ||||| ||||||||    
T  30978924 gggtagggtttgggtatgggttcggggtggatacatatatcctcgttatcc-tcc-gtacccgtattttgaaatcgggaaaaacccaaactca 30979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 298 - 434
Target Start/End: Original strand, 42576512 - 42576648
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||    
T  42576512 tgaaagttcttatatcatgacaattatcaaaccaaataacatgacatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcggg 42576611  T
Q  398 gagggtttgggtataggttcagggtggatacaaatat 434  Q
     |||||||| |||| |||||||||||| |||| ||||    
T  42576612 tagggtttgtgtatgggttcagggtgggtacatatat 42576648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 297 - 484
Target Start/End: Original strand, 4427823 - 4428010
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| || |  |||||||||||||    
T  4427823 atgaaagttcttatatcatgatagttatcaaaccaaataacatgacatatcattatgaaccccctcaacaaaaacaaaaacataacctttctacattcgg 4427922  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    | ||||||||||||| |||||  ||||||| || |||||  |||| |||||||  |||||||||| |||| ||| ||||||| |||||    
T  4427923 gtagggtttgggtatgggttcgaggtggatccatatatcaccgttgcccgtcccttacccgtattatgaagtcggggaaaacccaaac 4428010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 297 - 478
Target Start/End: Original strand, 14331426 - 14331607
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||  |||||||||||||||||||||||||||  |||||||||||||    
T  14331426 atgaaagttcttatatcatgttaattatcaaaccaaataacatagcatatcattatataccccctcaacaaaaacaaaaatatgacatttctacattcgg 14331525  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    | ||||||||||||| ||||| | |||| |||| |||||| ||||||||||||  |||| ||||||| |||| | |||||||    
T  14331526 gtagggtttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaac 14331607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 297 - 523
Target Start/End: Original strand, 26755651 - 26755865
Alignment:
Q  297 atgaaagttctt-atatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcg 395  Q
    |||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||  ||||  ||| ||||||||    
T  26755651 atgaaagttctttatatcatgacaattatcaaaccaaataacatggcatatcattatcaacctcctcaacaaaaataaaa--atgacctttttacattcg 26755748  T
Q  396 gggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaa 495  Q
    || ||||||||||||           ||| |||| |||||| |||||  |||||| ||||| |||||| ||||||| |||||| |||||||| ||| |||    
T  26755749 ggtagggtttgggta-----------tgggtacatatatccccgttaatcgtccgatacccatattttaaaatcgaagaaaacccaaactcatacccaaa 26755837  T
Q  496 ccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||| ||||||||||| |||||| |||||    
T  26755838 cccagtcaaatcgggaaaaacccgtcaa 26755865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 484
Target Start/End: Original strand, 18485565 - 18485734
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtata 412  Q
    ||||||||||||||||| |||||| ||| |||| ||||||||||||||| ||  ||||||||||||| |  ||||| |||| ||| | |||||||||||     
T  18485565 catgacaattatcaaaccaaataagatggcataccattatcaaccccctaaa--aaaacaaaaatataacctttctgcatttgggtaaggtttgggtatg 18485662  T
Q  413 ggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||||||||||| |||| |||||| |||||||||| | ||||||||||||| |||||||||| ||| |||||    
T  18485663 ggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaatcgaggataacccaaac 18485734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 484
Target Start/End: Complemental strand, 6164668 - 6164476
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaa-----caaaaatatgatttttctaca 391  Q
    |||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||      ||||||||||  |||||| |    
T  6164668 atgaaagttcatatatcatgacaattatcaaatcaaataacatggcatatcattatcaaccccttcaacaaaaaaaaataaaaaatatgacctttctata 6164569  T
Q  392 ttcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||||| ||||| | |||||  |||| |||||| |||| |||||  |||||||||||| ||||||  |||||||||| | ||||||| |||||    
T  6164568 ttcgggtagggtctaggtatgagttcggggtgggtacatatatcaccgttacccgtcccgtacccaaattttgaaattggggaaaacccaaac 6164476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 300 - 506
Target Start/End: Original strand, 44057776 - 44057991
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatat--------gatttttctaca 391  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||| ||| || ||| | | | ||||        ||  ||||||||    
T  44057776 aaagttcttatatcatgacaattatcaaaccaaataacatagcatatcattatcaacctccttaaaaaatatatatatatatgtatatgacctttctaca 44057875  T
Q  392 ttcggggagggtttgggtataggttcaggg-tggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacac 490  Q
    |||||| ||||||||||||| ||||| ||| ||| |||| |||||| | |||||||||| ||||| |||||||||||||  ||||||  |||||||  ||    
T  44057876 ttcgggtagggtttgggtatgggttcgggggtgggtacatatatccccattacccgtcccgtaccggtattttgaaatcagggaaaatccaaactcgtac 44057975  T
Q  491 ctaaaccccgtcaaat 506  Q
    | |||||| |||||||    
T  44057976 ccaaacccagtcaaat 44057991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 297 - 409
Target Start/End: Complemental strand, 24051806 - 24051696
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||| |||| |||||||| |||||| ||| |||||||||||||||||||||||||| || |||||   ||  |||||||||||||    
T  24051806 atgaaagttcttatatcatcacaactatcaaaccaaataatatggcatatcattatcaaccccctcaacaacaaaaaaaac--gacctttctacattcgg 24051709  T
Q  397 ggagggtttgggt 409  Q
    | ||||| |||||    
T  24051708 gtagggtatgggt 24051696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 9458983 - 9459035
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgtttta 282  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  9458983 aattaagaaaattgattgttgtatcaattttgttgacaattgttattgtttta 9459035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 523
Target Start/End: Original strand, 30846948 - 30847071
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||| || || || ||| ||||||     
T  30846948 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 30847047  T
Q  500 gtcaaatcggggaaaacctgtcaa 523  Q
    |||||| ||||||||||| |||||    
T  30847048 gtcaaaacggggaaaacccgtcaa 30847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 374 - 484
Target Start/End: Original strand, 15546721 - 15546830
Alignment:
Q  374 aaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgagg 473  Q
    |||||| |||||| |||||| ||| ||||| ||||||| |||||||||||| || | ||| ||  |||||||||||  ||||||| ||||||||||| ||    
T  15546721 aaatataattttt-tacatttgggaagggtatgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcgggg 15546819  T
Q  474 aaaactcaaac 484  Q
    ||||| |||||    
T  15546820 aaaacccaaac 15546830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 27341537 - 27341464
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| |||| | |||  ||||||||||| ||| || ||| ||||||||||||||||||||||||||||    
T  27341537 aattaagaaagttgactattgatttaattttgttcacagttattattgttttacatgtttatcctttatgaaag 27341464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 523
Target Start/End: Complemental strand, 37472808 - 37472723
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| ||||||||||| ||||||  || ||||| ||| |||||| |||||| ||||||||||| |||||    
T  37472808 cgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaaacggggaaaacccgtcaa 37472723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 25210362 - 25210442
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtatttt 463  Q
    |||||||||||||||  |||||| ||||| ||||  |||||| |||| |||||||||||||||||||  ||||||| ||||    
T  25210362 ttttctacattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgtttt 25210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 484
Target Start/End: Complemental strand, 35248491 - 35248388
Alignment:
Q  381 atttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactc 480  Q
    |||||||||||||| ||  |||||||||||| ||||| |||||| |||   ||||| | ||||||||||  ||||||| ||||| ||||| ||||||| |    
T  35248491 atttttctacattcaggacgggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaaccc 35248392  T
Q  481 aaac 484  Q
    ||||    
T  35248391 aaac 35248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 484
Target Start/End: Original strand, 35965320 - 35965420
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||||||  |||||||||||| ||||| | |||| ||||  ||||| | |||| | |||  ||||||| ||||||||||| |||||||||||    
T  35965320 ttttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacacatcca-tacccgtgttttgaaatcggggaaaactcaa 35965418  T
Q  483 ac 484  Q
    ||    
T  35965419 ac 35965420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 37039254 - 37039181
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| ||||||   | |||||||| |||||||||| ||| ||||||||||||||| | ||||||||||    
T  37039254 aattaagaaagttgatttaagaattaatttggttgacaatttttattgttttacatgtttaccttttatgaaag 37039181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 37106732 - 37106817
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| ||||||||||| ||||||| || || || ||| |||| | |||||| ||||||||||| |||||    
T  37106732 cgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaa 37106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 526
Target Start/End: Original strand, 13954778 - 13954873
Alignment:
Q  430 aatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaattt 526  Q
    |||||||| |||||| |||| ||||| || |||| |||||| |||||| |||||| || ||| |||||| |||||| ||  ||||||||||||||||    
T  13954778 aatatccttgttacctgtcccgtacc-gtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaattt 13954873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 430 - 526
Target Start/End: Original strand, 14095985 - 14096080
Alignment:
Q  430 aatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaattt 526  Q
    |||||||| |||||| |||| ||||| || |||| |||||| |||||| |||||| || ||| |||||| |||||| ||  ||||||||||||||||    
T  14095985 aatatccttgttacctgtcccgtacc-gtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgtcaattt 14096080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 24414236 - 24414096
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| |  |||||||||||  ||||||| |||||| |||| |||||||  |     
T  24414236 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgat 24414137  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| ||||||  ||||| ||||||||||| |||||    
T  24414136 acccatacccaaacccaatcaaaacggggaaaacccgtcaa 24414096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 13705512 - 13705477
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13705512 catgacaattatcaaacaaaataacatgacatatca 13705477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 45115496 - 45115531
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  45115496 catgacaattatcaaacaaaataacatgacatatca 45115531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 439 - 523
Target Start/End: Original strand, 45115599 - 45115685
Alignment:
Q  439 gttacccgtccggtacccgtattttgaaatcgaggaaaactc--aaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||   ||||||| |||||||||||||||||||||  | || || ||| |||||| |||||| ||||||||||| |||||    
T  45115599 gttacccgtctcatacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 45115685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 523
Target Start/End: Original strand, 13830739 - 13830860
Alignment:
Q  401 ggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccg 500  Q
    |||||| |||| ||||| |||||| |||  |||| | ||||||| ||||  ||||||| |||||| |||||||||||| || || || ||| |||||| |    
T  13830739 ggtttgagtatgggttcggggtgggtacttatatacccgttacc-gtcccatacccgtgttttgagatcgaggaaaacccatacccatacccaaacccag 13830837  T
Q  501 tcaaatcggggaaaacctgtcaa 523  Q
    |||||  |||||||||| |||||    
T  13830838 tcaaaatggggaaaacccgtcaa 13830860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 348
Target Start/End: Original strand, 14540708 - 14540754
Alignment:
Q  302 agttcttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    |||| ||||| || |||||||||||||| ||||||||||||||||||    
T  14540708 agtttttataacacgacaattatcaaacaaaataacatgacatatca 14540754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 36034787 - 36034745
Alignment:
Q  258 tttgttgacaattgttactgttttacatgtttatcctttatga 300  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||    
T  36034787 tttgttgacaattgttattgttttacaagtttaccctttatga 36034745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 7314752 - 7314620
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||| ||||||| ||||| ||||||  ||  |||| | ||||||||||||  ||| |||||||| |||||| ||||||| ||     
T  7314752 ttttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaacccat 7314653  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    || || | | |||||| |||||| |||||||||    
T  7314652 acccatatccaaacccagtcaaaacggggaaaa 7314620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 9632371 - 9632511
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| ||||||||||  |||| | | ||||||||||  ||||||| ||| || |||| ||||||| ||     
T  9632371 ttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccat 9632470  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||  ||||||  ||||| |||| |||||| |||||    
T  9632471 acccatactcaaacccattcaaaacgggaaaaacccgtcaa 9632511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 6e-57; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 297 - 477
Target Start/End: Complemental strand, 29200075 - 29199895
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| | |||||||||||||||||||  |||||||||||||    
T  29200075 atgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaatccctttaacaaaaacaaaaatatgacctttctacattcgg 29199976  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaa 477  Q
    | || |||||||||| ||||| |||| |||||| ||||||  ||||||||||| |||||||||||||||||||| ||||||    
T  29199975 gtagagtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa 29199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 311 - 523
Target Start/End: Complemental strand, 20611158 - 20610946
Alignment:
Q  311 atcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggta 410  Q
    ||||||| |||| |||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| || ||||| ||||||    
T  20611158 atcatgaaaattgtcaaaacaaataacatgacatatcattatcaaccccctcaacaaaaataaaaatatgacctttctacattcaggtagggtctgggta 20611059  T
Q  411 taggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggg 510  Q
    ||| ||| ||||||||||| |||| | ||||||||||||  ||||||||||||||||||| ||||| | ||||| || |||||||||| || ||||||||    
T  20611058 tagtttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaaacccatacctaaacccagttaaatcggg 20610959  T
Q  511 gaaaacctgtcaa 523  Q
     |||||| |||||    
T  20610958 aaaaacccgtcaa 20610946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 297 - 515
Target Start/End: Original strand, 9458563 - 9458779
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||  ||||||||||||||| ||||  ||||||||    
T  9458563 atgaaagttcttatatcatgagaattatcaaaccaaataagatgacatatcattatcaaccccctaaa--aaaacaaaaatatgactttttcacattcgg 9458660  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | ||| |||||||||  ||||  ||||| |||| |||||| ||||| | |||| |||||||||||||||||| | ||||| |||||||||| ||| ||||    
T  9458661 gtaggatttgggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcatacccaaac 9458760  T
Q  497 cccgtcaaatcggggaaaa 515  Q
    || ||||||||||||||||    
T  9458761 ccagtcaaatcggggaaaa 9458779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 297 - 487
Target Start/End: Original strand, 18908792 - 18908981
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||||||||||||| | ||||||||||  |||||||||||| ||||||||||||||| ||||| ||||  ||| |||||||||    
T  18908792 atgaaagttcttatatcatgacaattatcaatccaaataacatggtatatcattatcagccccctcaacaaaaa-aaaaacatgacctttttacattcgg 18908890  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactca 487  Q
    | |||||||||||||  |||  |||||| |||| ||||||| |||||||||||  || |||||||||||||||| ||||||| ||||||||    
T  18908891 gtagggtttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactca 18908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 376
Target Start/End: Original strand, 9458221 - 9458297
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaa 376  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9458221 aaagttcttatatcatgataattatcaaaccaaataacatgacatatcattatcaatcccctcaacaaaaacaaaaa 9458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 351 - 506
Target Start/End: Complemental strand, 17547038 - 17546883
Alignment:
Q  351 atcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccg 450  Q
    |||||||||||||||||||| ||||| ||||  ||||||| |||||| ||||||||| |||  |||| |||||| ||||  ||||| |||||||  |||     
T  17547038 atcaaccccctcaacaaaaataaaaacatgaactttctacgttcgggtagggtttggatatgagttcggggtgggtacatgtatccccgttaccgatccc 17546939  T
Q  451 gtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaat 506  Q
    ||| ||||||| |||||||||||||| | ||||| || ||| |||||| |||||||    
T  17546938 gtatccgtattatgaaatcgaggaaaccccaaacccatacccaaacccagtcaaat 17546883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 384 - 511
Target Start/End: Original strand, 9458843 - 9458970
Alignment:
Q  384 tttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    |||||||||||||| || ||||||||||| |||| |||||| |||| |||| | |||||||| ||| ||||||||||| | |||||| ||||||| || |    
T  9458843 tttctacattcgggtagagtttgggtataagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggggaaaacccaga 9458942  T
Q  484 ctcacacctaaaccccgtcaaatcgggg 511  Q
    | || ||| |||||| ||||||||||||    
T  9458943 cccatacccaaacccagtcaaatcgggg 9458970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 391 - 521
Target Start/End: Complemental strand, 12678190 - 12678060
Alignment:
Q  391 attcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacac 490  Q
    |||||||  |||||||||||| |||||||||||| |||  |||| | | ||||||||||  |||| || | ||||||||| ||||||| |||||||| ||    
T  12678190 attcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatac 12678091  T
Q  491 ctaaaccccgtcaaatcggggaaaacctgtc 521  Q
    | |||||| |||||| ||| |||||||||||    
T  12678090 ccaaacccagtcaaaacggcgaaaacctgtc 12678060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 523
Target Start/End: Complemental strand, 5863489 - 5863347
Alignment:
Q  381 atttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactc 480  Q
    |||||| |||||| |||  |||||||||||| |||||  ||||| ||   |||| | ||||||||||||  ||||||| ||||||||||| ||||||| |    
T  5863489 atttttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaaccc 5863390  T
Q  481 aaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    | || || ||| |||||| |||||| ||||||||||| |||||    
T  5863389 atacccatacccaaacccagtcaaaacggggaaaacccgtcaa 5863347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 383 - 517
Target Start/End: Original strand, 27738756 - 27738890
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||| ||||    |||||||||||  ||||||| ||||||||||| ||||||| ||     
T  27738756 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccat 27738855  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    || || |||||||||| |||||| |||| ||||||    
T  27738856 acccatacctaaacccagtcaaaacgggaaaaacc 27738890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 484
Target Start/End: Complemental strand, 28079780 - 28079699
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    ||||||||| ||||| |||||| |||  |||||| |||||||||||| |||||| | ||||||||||| ||||||| |||||    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaac 28079699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 3484027 - 3483887
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | |||||||| |||  ||||||| ||| || |||| ||||||| ||     
T  3484027 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccat 3483928  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| ||||||||||| |||||    
T  3483927 acacatacccaaacccagtcaaaacggggaaaacccgtcaa 3483887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 14410942 - 14410858
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||||||||||  |||||||||||||    
T  14410942 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 27534668 - 27534808
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| | ||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||| ||||||||||     
T  27534668 ttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcat 27534767  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| ||||||  ||||| ||||||||||| |||||    
T  27534768 acccatacccaaacccaatcaaaacggggaaaacccgtcaa 27534808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 32853828 - 32853968
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| |||| ||||||| ||     
T  32853828 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 32853927  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || | | |||||| |||||| ||| ||||||| |||||    
T  32853928 acccataaccaaacccagtcaaaacggagaaaacccgtcaa 32853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 496
Target Start/End: Complemental strand, 256596 - 256483
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||  ||  |||||||||||| ||||  |||||| |||  |||| | | |||||||||  |||||| | ||||||||||| |||||||||||    
T  256596 ttttctacatttaggaggggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaa 256497  T
Q  483 actcacacctaaac 496  Q
    ||||| ||| ||||    
T  256496 actcatacccaaac 256483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 517
Target Start/End: Original strand, 2367327 - 2367444
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| |||| ||||||| || || || ||| |||||      
T  2367327 gggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccta 2367426  T
Q  500 gtcaaatcggggaaaacc 517  Q
    |||||| |||| ||||||    
T  2367427 gtcaaaacgggaaaaacc 2367444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 297
Target Start/End: Complemental strand, 34637773 - 34637706
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatccttta 297  Q
    |||||||||| |||||| |||||||||||||| ||| ||||| || |||||||||  |||| ||||||    
T  34637773 aattaagaaagttgattattgtattaattttgctgataattgctattgttttacaaatttagccttta 34637706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 523
Target Start/End: Complemental strand, 10188126 - 10188044
Alignment:
Q  441 tacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    |||||||||  ||||||| |||||| |||| ||||||| || || || ||| |||||| |||||| ||||||||||| |||||    
T  10188126 tacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaa 10188044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 314 - 348
Target Start/End: Original strand, 12309510 - 12309544
Alignment:
Q  314 atgacaattatcaaactaaataacatgacatatca 348  Q
    |||||||||||||||| ||||||||||||||||||    
T  12309510 atgacaattatcaaacaaaataacatgacatatca 12309544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 505
Target Start/End: Original strand, 13769056 - 13769178
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||||||||| ||  |||||||| ||| ||||| |||||| |||  ||||   ||||||||||||  ||||| | ||||||| ||| |||||||  ||    
T  13769056 ttttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccgaa 13769155  T
Q  483 actcacacctaaaccccgtcaaa 505  Q
    || || |||||||||| ||||||    
T  13769156 acccatacctaaacccagtcaaa 13769178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 12678251 - 12678210
Alignment:
Q  307 ttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    ||||| || |||||||||||||| ||||||||||||||||||    
T  12678251 ttataacacgacaattatcaaacaaaataacatgacatatca 12678210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 496
Target Start/End: Original strand, 20349068 - 20349161
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    |||||||||  |||| |||||| |||  |||||| |||||| |||||  ||||||| ||||||||||| ||||||  |||||||| ||| ||||    
T  20349068 tttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaatccaaactcataccaaaac 20349161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 30986292 - 30986377
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| |||||| |||| ||||||| || || || ||| |||| | |||||| ||||||||||| |||||    
T  30986292 cgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaa 30986377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 483
Target Start/End: Original strand, 9402573 - 9402672
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    ||||||||||||| |   |||||| |||| ||||| ||||||| ||  ||||||  ||||||||||| |||||| | ||||||||||| ||||||| |||    
T  9402573 ttttctacattcgagacaggtttgagtatgggttc-gggtggacacctatatccatgttacccgtcctgtacccatgttttgaaatcggggaaaacccaa 9402671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 517
Target Start/End: Complemental strand, 10142604 - 10142488
Alignment:
Q  401 ggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccg 500  Q
    |||||||||||  |||| |||||| |||  |||| | ||||||| ||||  ||||||| |||||| |||| ||||||| || || || ||| |||||| |    
T  10142604 ggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccag 10142505  T
Q  501 tcaaatcggggaaaacc 517  Q
    ||||| || ||||||||    
T  10142504 tcaaaacgaggaaaacc 10142488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 12141369 - 12141509
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||| ||||||||  || |||| |||||| || | ||||||| ||     
T  12141369 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccat 12141468  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || |  ||| |||||| |||||| ||||||||||| |||||    
T  12141469 acccgtacccaaacccagtcaaaacggggaaaacccgtcaa 12141509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 300 - 515
Target Start/End: Complemental strand, 1772586 - 1772371
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgggga 399  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |    
T  1772586 aaagttcttatatcatgataattatcaaacaaaataacatgacatatcattatcaacccccttaacaaaaacaaaaatatggtctttctacattcgggta 1772487  T
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    ||||||| ||||  |||| |||||| |||| |||||| | |||| || || ||||||||||||| ||||||| |||||| ||||  || ||| | ||||     
T  1772486 gggtttgtgtatgagttcggggtgggtacatatatccgcattactcgccctgtacccgtattttaaaatcgaagaaaacccaaaaccatacccagaccca 1772387  T
Q  500 gtcaaatcggggaaaa 515  Q
    ||||||||||||||||    
T  1772386 gtcaaatcggggaaaa 1772371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 298 - 470
Target Start/End: Complemental strand, 40796326 - 40796154
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||  ||||||||||| ||    
T  40796326 tgaaagttcttatatcatgacaattatcaaaccaaataacaggacatatcattatcaacccccttaacaaaaataaaaatatgacctttctacattccgg 40796227  T
Q  398 gagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
     | |||||||||||   ||  |||||| ||||  ||||||| |||||||||| ||||||||||||||||||||    
T  40796226 taaggtttgggtatgactttggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcg 40796154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 298 - 429
Target Start/End: Original strand, 2487694 - 2487825
Alignment:
Q  298 tgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggg 397  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||||||||||  ||||||||||  ||    
T  2487694 tgaaagttcttatatcatgacaattatcaaaccaaataacatggcatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacatttagg 2487793  T
Q  398 gagggtttgggtataggttcagggtggataca 429  Q
     ||||||||||||| ||||| |||||| ||||    
T  2487794 tagggtttgggtatgggttcggggtgggtaca 2487825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 325 - 508
Target Start/End: Complemental strand, 35687653 - 35687470
Alignment:
Q  325 caaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtgg 424  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||| ||||| | ||  || | |    
T  35687653 caaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacatttctacattcgggtagggttttggtatggatttgggatag 35687554  T
Q  425 atacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcg 508  Q
     |||| |||||   ||||||||||  ||||||||||| |||||||| |||||||||||||||| ||  |||||| |||||||||    
T  35687553 gtacatatatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactcatactcaaacccagtcaaatcg 35687470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 300 - 370
Target Start/End: Original strand, 23330065 - 23330135
Alignment:
Q  300 aaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaa 370  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||    
T  23330065 aaagttcttatatcatgacaattatcaaaccgaataacatgacatatcattattaaccccctcaacaaaaa 23330135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 11354802 - 11354729
Alignment:
Q  230 aattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatcctttatgaaag 303  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| | ||||| ||||    
T  11354802 aattaagaaagttgattgttgaattaattttgttgacaattgttattgttttacatgtttaccatttataaaag 11354729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 39728655 - 39728787
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | |||||||| |||  |||||||||||||| ||||||||||||  |     
T  39728655 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaacctat 39728754  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    ||||| ||| |||||| |||||| |||||||||    
T  39728755 actcatacccaaacccagtcaaaacggggaaaa 39728787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 229 - 296
Target Start/End: Original strand, 26495891 - 26495958
Alignment:
Q  229 aaattaagaaaattgattgttgtattaattttgttgacaattgttactgttttacatgtttatccttt 296  Q
    |||||||||||  || |||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  26495891 aaattaagaaatgtggttgttgaattaattttgttgacaattgctattgttttacatgtttatccttt 26495958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 438 - 523
Target Start/End: Original strand, 52572648 - 52572733
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| |||||| ||||||||||||||| || || ||| |||||| ||||||  ||||||||||||||||    
T  52572648 cgttacccgtcccatacccgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaa 52572733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 523
Target Start/End: Complemental strand, 4557389 - 4557269
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtc 502  Q
    ||||||||| ||||| |||||| |||  |||| ||||||||||||||  ||||| | |||||||| || ||||||| ||||| || ||| |||||| |||    
T  4557389 tttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagtc 4557290  T
Q  503 aaatcggggaaaacctgtcaa 523  Q
    ||| |||| |||||| |||||    
T  4557289 aaaacgggaaaaacccgtcaa 4557269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 523
Target Start/End: Original strand, 42243407 - 42243511
Alignment:
Q  419 gggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacct 518  Q
    ||||||||| | ||||||||||||||| ||   ||||||| | ||||||||| | ||||| |||||||| ||| |||||| |||||| |||||||||||     
T  42243407 gggtggataaatatatcctcgttacccatctcatacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtcaaaccggggaaaaccc 42243506  T
Q  519 gtcaa 523  Q
    |||||    
T  42243507 gtcaa 42243511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 515
Target Start/End: Complemental strand, 48390921 - 48390789
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| ||| ||||||  |||| ||||||| |||||||| ||| |||  |||| | ||||||||||||  ||||||| ||||||||||| ||||||| ||     
T  48390921 ttttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccat 48390822  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    || || ||| |||||| |||||| |||||||||    
T  48390821 acccatacccaaacccagtcaaaacggggaaaa 48390789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 523
Target Start/End: Original strand, 49580048 - 49580188
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  ||||||| |||| |||||  ||||| |||  |||| ||||||||||||||  ||||||| |||||| |||| ||||||| ||     
T  49580048 ttttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccat 49580147  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||| |||||| ||||||||||| |||||    
T  49580148 acccatacccaaacccagtcaaaacggggaaaacccgtcaa 49580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 523
Target Start/End: Original strand, 54317145 - 54317268
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    ||||||||| || ||||| |||||| |||  |||| | ||||||||||||  |||  || ||||||||||| ||||||||||||| || ||  ||||||     
T  54317145 gggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaaccca 54317244  T
Q  500 gtcaaatcggggaaaacctgtcaa 523  Q
    |||||| ||||||||||| |||||    
T  54317245 gtcaaaacggggaaaacccgtcaa 54317268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 431 - 509
Target Start/End: Original strand, 2490337 - 2490415
Alignment:
Q  431 atatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcgg 509  Q
    |||||| | |||||||| | |||||||||||||||||||| ||||||||||||| || | | |||||| ||||||||||    
T  2490337 atatccccattacccgttctgtacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaatcgg 2490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 42758358 - 42758490
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| | ||||||  |||||||||||| ||||| ||||| ||||  |||| |  |||||||||||  |||| || ||||||||||| || |||| |||    
T  42758358 ttttcttcgttcgggacgggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaa 42758457  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    ||||| ||| |||||| || ||| |||||||||    
T  42758458 actcatacccaaacccagttaaaacggggaaaa 42758490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 51972051 - 51972102
Alignment:
Q  229 aaattaagaaaattgattgttgtattaattttgttgacaattgttactgttt 280  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||| |||||    
T  51972051 aaattaagaaagttgattgttgaattaattttgttgaaaattgttattgttt 51972102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 517
Target Start/End: Complemental strand, 3385912 - 3385826
Alignment:
Q  431 atatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    |||||||||||||| |||| |||||||| ||||||||| |   |||| |||||  || |||||||||| |||||| |||||||||||    
T  3385912 atatcctcgttacctgtcccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaagcggggaaaacc 3385826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 498
Target Start/End: Original strand, 19111735 - 19111833
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccc 498  Q
    ||||||||| || |||| ||||||| |||  |||| | ||||| || ||| |||||||| ||||||||||| | |||||||||||||| ||| ||||||    
T  19111735 gggtttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaaccc 19111833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 523
Target Start/End: Complemental strand, 44953484 - 44953399
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||||||||  ||||||| |||||| |||| ||||||| || || || ||| |||||| |||||| ||||||||||| |||||    
T  44953484 cgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaa 44953399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 4016148 - 4016008
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| ||||||||  | |||||||||| ||||| | |||| |||  |||| | ||||| ||||||  ||||| | ||||||||||| ||||||| |||    
T  4016148 ttttctgcattcgggacgagtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaa 4016049  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    || || ||| |||||  |||||| |||| |||||| |||||    
T  4016048 acccatacccaaacctagtcaaaacgggaaaaacccgtcaa 4016008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 484
Target Start/End: Complemental strand, 30616368 - 30616284
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaac 484  Q
    |||| ||||||| ||||| |||||| || | ||| |||||||||||||||  || |||| ||||||||||| ||||||| |||||    
T  30616368 gggtatgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaac 30616284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 528
Target Start/End: Original strand, 44252748 - 44252876
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| ||||| |||||| |||  |||| |  ||||| |||||  ||||||| ||| || |||| ||||||| || || || ||| ||||||     
T  44252748 gggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 44252847  T
Q  500 gtcaaatcggggaaaacctgtcaattttg 528  Q
    |||||| ||||||||||| ||||| ||||    
T  44252848 gtcaaaacggggaaaacccgtcaaatttg 44252876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 523
Target Start/End: Complemental strand, 6738440 - 6738369
Alignment:
Q  452 tacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    ||||||| ||||||||||| ||||||| || || || ||| |||||| |||||| |||| ||||||||||||    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaa 6738369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 7469865 - 7469742
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    ||||||| |||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| ||| || |||  ||||||| || || || ||| ||||||     
T  7469865 gggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccatacccatacccaaaccca 7469766  T
Q  500 gtcaaatcggggaaaacctgtcaa 523  Q
    |||||| ||||||||||| |||||    
T  7469765 gtcaaaacggggaaaacccgtcaa 7469742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 517
Target Start/End: Complemental strand, 22535890 - 22535811
Alignment:
Q  438 cgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    ||||||||||||  || |||| ||||||||| | |||||||||| || || ||| |||||| |||||| |||||||||||    
T  22535890 cgttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacc 22535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 22535992 - 22535957
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22535992 catgacaattatcaaacaaaataacatgacatatca 22535957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 348
Target Start/End: Original strand, 30682742 - 30682793
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatca 348  Q
    |||| |||| ||||| |||||| |||||||||| ||||||||||||||||||    
T  30682742 atgatagtttttataacatgaccattatcaaacaaaataacatgacatatca 30682793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 34025891 - 34025926
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34025891 catgacaattatcaaacaaaataacatgacatatca 34025926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 523
Target Start/End: Complemental strand, 39655360 - 39655237
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| ||||  |||||| |||  |||| |  |||||||||||  ||||||| |||||| |||| ||||||| || || || ||| ||||||     
T  39655360 gggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccca 39655261  T
Q  500 gtcaaatcggggaaaacctgtcaa 523  Q
     ||||| ||||||||||| |||||    
T  39655260 atcaaaacggggaaaacccgtcaa 39655237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 478
Target Start/End: Original strand, 44172610 - 44172705
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| |||| |||||||    
T  44172610 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 44172705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 478
Target Start/End: Original strand, 44179310 - 44179405
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaac 478  Q
    |||| |||||| |||  |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| |||| |||||||    
T  44179310 ttttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaac 44179405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 523
Target Start/End: Original strand, 44639275 - 44639398
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||| ||||| |||||| |||  |||| | ||||||||||||  ||||||| |||||| ||   ||||||| || || || ||| ||||||     
T  44639275 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaaccca 44639374  T
Q  500 gtcaaatcggggaaaacctgtcaa 523  Q
    ||||||  |||||||||| |||||    
T  44639375 gtcaaaatggggaaaaccagtcaa 44639398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Complemental strand, 48390968 - 48390933
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  48390968 catgacaattatcaaacaaaataacatgacatatca 48390933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 505
Target Start/End: Complemental strand, 23910284 - 23910234
Alignment:
Q  455 ccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaa 505  Q
    |||| |||||||||||||||||||||||||||| ||  |||||| ||||||    
T  23910284 ccgtgttttgaaatcgaggaaaactcaaactcatacacaaacccagtcaaa 23910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 48305728 - 48305606
Alignment:
Q  400 gggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaacccc 499  Q
    |||||||||||||||||| |||||| |||  |||| | || ||| ||| |  ||||||| ||||||||| | |||||||||| || || | | ||||||     
T  48305728 gggtttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactcatacccataaccaaaccca 48305629  T
Q  500 gtcaaatcggggaaaacctgtca 522  Q
    ||||||  |||||||||| ||||    
T  48305628 gtcaaaatggggaaaacccgtca 48305606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 523
Target Start/End: Complemental strand, 10043378 - 10043246
Alignment:
Q  391 attcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacac 490  Q
    |||||||  |||| ||||||| ||||| |||||| | || ||| || ||||||||||||  ||||| | |||||||| |  ||||||| ||||| || ||    
T  10043378 attcgggatgggtatgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatac 10043279  T
Q  491 ctaaaccccgtcaaatcggggaaaacctgtcaa 523  Q
    | |||||| ||||||  || ||||||| |||||    
T  10043278 ccaaacccagtcaaagtggagaaaacccgtcaa 10043246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 26149446 - 26149414
Alignment:
Q  228 aaaattaagaaaattgattgttgtattaatttt 260  Q
    ||||||||||||||||||||||||||| |||||    
T  26149446 aaaattaagaaaattgattgttgtattgatttt 26149414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 515
Target Start/End: Original strand, 34025938 - 34026070
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||| |||||| |||  |||| |||||||  |||| ||||||| ||  |||| ||||||||||||||  |||| || ||||||||||| ||||||| ||     
T  34025938 ttttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccat 34026037  T
Q  483 actcacacctaaaccccgtcaaatcggggaaaa 515  Q
    || || | | |||||| |||||| |||| ||||    
T  34026038 acccatatccaaacccagtcaaaacgggaaaaa 34026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 523
Target Start/End: Original strand, 34119660 - 34119780
Alignment:
Q  403 tttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtc 502  Q
    ||||||||| ||||| |||||| |||  |||| |  |||| |||||   ||||||| |||| |||||| | |||||||||||||| ||| ||||||  ||    
T  34119660 tttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatc 34119759  T
Q  503 aaatcggggaaaacctgtcaa 523  Q
    |||  |||||||||| |||||    
T  34119760 aaaatggggaaaacccgtcaa 34119780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 48922450 - 48922414
Alignment:
Q  177 taattactaccgtcgtcccttattatagggccctttt 213  Q
    |||||||||||  ||||||||||||||||||||||||    
T  48922450 taattactacctccgtcccttattatagggccctttt 48922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 297 - 509
Target Start/End: Original strand, 2867 - 3079
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||| ||| ||||||||||||||||||  |||||||||| ||||| |||||||||| ||| |||||||||||| |  |||  |||||||||||||    
T  2867 atgaaagttattaaatcatgacaattatcaaatcaaataacatggcatataattatcaacctcctaaacaaaaacaaacaagtgacatttctacattcgg 2966  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaac 496  Q
    | |||||||| |||| ||||| |||||| |||| ||||||  |||| |||||| |||||||||||||||||||| ||||||| |||||||| ||| ||||    
T  2967 gtagggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaaac 3066  T
Q  497 cccgtcaaatcgg 509  Q
    || ||||||||||    
T  3067 ccagtcaaatcgg 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 297 - 483
Target Start/End: Complemental strand, 56087 - 55902
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  56087 atgaaagtttttatatcaggacaattatcaaaccaaataacatggaatatcattatgaaccccctcaacaaaaacaaaaatatgatctttctacattcgg 55988  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaa 483  Q
    | ||||||||||||| | ||| |||||| |||| ||||||  ||||||| ||| |||||| ||||||||||| | ||||||| ||||    
T  55987 gtagggtttgggtatggattcggggtgggtacatatatccctgttaccc-tcctgtacccatattttgaaattggggaaaacccaaa 55902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 297 - 468
Target Start/End: Complemental strand, 128311 - 128140
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| ||||||||||| || |  |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||  |||||||||| ||    
T  128311 atgaaatttcttatatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaatatgacctttctacatttgg 128212  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaat 468  Q
    | ||||||||||||| ||||| |||||| |||| |||||| | |||||||||| ||||||||||| ||||||    
T  128211 gtagggtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaat 128140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 297 - 470
Target Start/End: Complemental strand, 105659 - 105486
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| ||||||||||| || |  |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||  |||| ||||| ||    
T  105659 atgaaatttcttatatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaacatgacctttcaacatttgg 105560  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    | ||||||||||||| ||||| |||||| |||| ||||||  ||||||||||| |||||||||||  |||||||    
T  105559 gtagggtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgtattaagaaatcg 105486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 297 - 469
Target Start/End: Original strand, 69993 - 70165
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    |||||| ||||||||||| || |  |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||  |||| ||||| ||    
T  69993 atgaaatttcttatatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaacatgacctttcaacatttgg 70092  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatc 469  Q
    | ||||||||||||| ||||  |||||| |||| ||||||||||||||||||| ||||||||||| |||||||    
T  70093 gtagggtttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgtattatgaaatc 70165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 297 - 470
Target Start/End: Original strand, 16866 - 17038
Alignment:
Q  297 atgaaagttcttatatcatgacaattatcaaactaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcgg 396  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| |||||||| ||||| ||||| ||||  |||||| ||||||    
T  16866 atgaaagttcttatatcatgataattatcaaaccaaataacatggcatatcattatcaatcccctcaataaaaa-aaaaaaatgacctttctagattcgg 16964  T
Q  397 ggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcg 470  Q
    | | ||||||| |||  |||| |||||| |||| |||||| ||| ||||||||  ||| |||||||||||||||    
T  16965 gtatggtttggatatgagttcggggtgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcg 17038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 331 - 509
Target Start/End: Original strand, 211297 - 211474
Alignment:
Q  331 aaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgatttttctacattcggggagggtttgggtataggttcagggtggatacaa 430  Q
    |||||||||| ||||||||||||||| |||| || ||||||||||||||||  ||||||||||| || || |||||||||| ||||| |||||| ||||     
T  211297 aaataacatggcatatcattatcaactccctaaa-aaaaacaaaaatatgacatttctacattcaggtagagtttgggtatgggttcggggtgggtacat 211395  T
Q  431 atatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcgg 509  Q
    ||||||  ||||||||||  ||||||||||||||||||||  |||||| ||||| || ||| |||| | ||||||||||    
T  211396 atatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtcaaatcgg 211474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 383 - 498
Target Start/End: Original strand, 33377 - 33492
Alignment:
Q  383 ttttctacattcggggagggtttgggtataggttcagggtggatacaaatatcctcgttacccgtccggtacccgtattttgaaatcgaggaaaactcaa 482  Q
    |||||| ||||||||  | |||||||||| ||||| |||||| |||| |||| | ||||||||||||  ||||||| ||||||||||| ||||||| |||    
T  33377 ttttctgcattcgggacgagtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaa 33476  T
Q  483 actcacacctaaaccc 498  Q
    || || ||| ||||||    
T  33477 acccatacccaaaccc 33492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 348
Target Start/End: Original strand, 4194 - 4229
Alignment:
Q  313 catgacaattatcaaactaaataacatgacatatca 348  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4194 catgacaattatcaaacaaaataacatgacatatca 4229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 526
Target Start/End: Original strand, 14900 - 14975
Alignment:
Q  452 tacccgtattttgaaatcgaggaaaactcaaactcaca-cctaaaccccgtcaaatcggggaaaacctgtcaattt 526  Q
    ||||||| ||||||||||| ||||||| |||||||| | |||||||||  ||||| ||| ||||||| ||||||||    
T  14900 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaattt 14975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 517
Target Start/End: Complemental strand, 107437 - 107361
Alignment:
Q  441 tacccgtccggtacccgtattttgaaatcgaggaaaactcaaactcacacctaaaccccgtcaaatcggggaaaacc 517  Q
    |||||||||  |||| || ||||||||||||| |||||||||||  | ||||||||||  |||||  ||||||||||    
T  107437 tacccgtcccatacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaagtggggaaaacc 107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University