View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11835_low_33 (Length: 424)

Name: NF11835_low_33
Description: NF11835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11835_low_33
NF11835_low_33
[»] chr2 (36 HSPs)
chr2 (7-414)||(11036378-11036782)
chr2 (142-414)||(20692346-20692620)
chr2 (11-135)||(1583719-1583842)
chr2 (11-135)||(7309673-7309796)
chr2 (11-142)||(769076-769206)
chr2 (11-142)||(33189160-33189290)
chr2 (11-135)||(11141345-11141468)
chr2 (40-135)||(44255703-44255797)
chr2 (9-135)||(8736351-8736476)
chr2 (41-135)||(39630294-39630387)
chr2 (9-142)||(32840095-32840227)
chr2 (8-135)||(45094381-45094507)
chr2 (19-135)||(1730101-1730215)
chr2 (9-135)||(41585600-41585725)
chr2 (7-135)||(13017815-13017941)
chr2 (11-135)||(35047589-35047712)
chr2 (52-135)||(6749238-6749320)
chr2 (52-135)||(12263507-12263589)
chr2 (7-130)||(32839563-32839685)
chr2 (7-113)||(7227943-7228049)
chr2 (9-135)||(20935744-20935869)
chr2 (42-135)||(3092353-3092445)
chr2 (7-135)||(7167577-7167704)
chr2 (19-135)||(7611798-7611913)
chr2 (7-135)||(17905690-17905815)
chr2 (7-135)||(28740632-28740759)
chr2 (7-135)||(30698317-30698444)
chr2 (40-135)||(740773-740867)
chr2 (9-126)||(21504488-21504604)
chr2 (9-105)||(44205597-44205693)
chr2 (52-135)||(14306717-14306799)
chr2 (13-135)||(2274699-2274819)
chr2 (60-135)||(28022014-28022088)
chr2 (8-99)||(40026101-40026192)
chr2 (85-135)||(42941047-42941096)
chr2 (79-135)||(2924832-2924887)
[»] chr3 (40 HSPs)
chr3 (181-411)||(2949278-2949505)
chr3 (7-135)||(7976584-7976711)
chr3 (7-135)||(53129752-53129879)
chr3 (25-142)||(46706706-46706822)
chr3 (19-135)||(2104782-2104897)
chr3 (19-135)||(43863860-43863974)
chr3 (40-135)||(48947674-48947768)
chr3 (19-135)||(36397898-36398013)
chr3 (19-135)||(53470338-53470453)
chr3 (40-135)||(671528-671622)
chr3 (52-135)||(35279831-35279913)
chr3 (9-135)||(26323394-26323519)
chr3 (7-135)||(7302382-7302509)
chr3 (7-135)||(21307441-21307568)
chr3 (55-135)||(26547099-26547178)
chr3 (19-135)||(34088619-34088734)
chr3 (9-120)||(38506799-38506910)
chr3 (19-130)||(47284117-47284227)
chr3 (22-135)||(47336932-47337044)
chr3 (7-135)||(37054430-37054557)
chr3 (7-135)||(42005862-42005989)
chr3 (7-111)||(47767468-47767572)
chr3 (19-113)||(31021727-31021822)
chr3 (20-135)||(52527085-52527199)
chr3 (37-135)||(21730967-21731064)
chr3 (7-113)||(30766589-30766695)
chr3 (52-135)||(6836968-6837050)
chr3 (40-105)||(30767174-30767239)
chr3 (72-129)||(36635983-36636039)
chr3 (79-135)||(34396419-34396474)
chr3 (9-113)||(55460378-55460482)
chr3 (48-135)||(44288368-44288454)
chr3 (52-135)||(46635927-46636009)
chr3 (34-113)||(50168540-50168619)
chr3 (7-143)||(31189298-31189433)
chr3 (42-110)||(40493140-40493208)
chr3 (61-107)||(32665975-32666021)
chr3 (60-130)||(48825041-48825110)
chr3 (48-113)||(25547377-25547441)
chr3 (73-130)||(28182160-28182215)
[»] chr1 (38 HSPs)
chr1 (19-135)||(946423-946537)
chr1 (9-135)||(41822453-41822578)
chr1 (9-135)||(41822607-41822733)
chr1 (19-137)||(49659264-49659381)
chr1 (11-135)||(15467873-15467996)
chr1 (19-135)||(13181636-13181751)
chr1 (7-135)||(44570714-44570841)
chr1 (40-135)||(48953637-48953731)
chr1 (37-135)||(31166376-31166473)
chr1 (20-142)||(41823063-41823184)
chr1 (11-113)||(47820253-47820355)
chr1 (9-135)||(52135535-52135660)
chr1 (7-135)||(8224804-8224931)
chr1 (40-135)||(37447269-37447363)
chr1 (40-135)||(39887196-39887290)
chr1 (21-135)||(35491207-35491320)
chr1 (7-113)||(37447833-37447939)
chr1 (9-135)||(44571239-44571364)
chr1 (21-142)||(34003511-34003631)
chr1 (40-135)||(28632496-28632590)
chr1 (42-135)||(37036859-37036951)
chr1 (55-135)||(49216248-49216327)
chr1 (40-135)||(946982-947076)
chr1 (9-135)||(32128068-32128193)
chr1 (7-135)||(37448311-37448438)
chr1 (19-108)||(50471798-50471887)
chr1 (7-135)||(6470596-6470723)
chr1 (19-135)||(21267721-21267835)
chr1 (52-130)||(42230801-42230879)
chr1 (22-135)||(31195507-31195619)
chr1 (52-113)||(32287863-32287924)
chr1 (52-113)||(32647382-32647444)
chr1 (22-101)||(43622921-43623000)
chr1 (52-135)||(23956272-23956354)
chr1 (21-135)||(1902111-1902224)
chr1 (7-113)||(51847888-51847993)
chr1 (27-135)||(10166555-10166661)
chr1 (22-110)||(41481359-41481447)
[»] chr7 (38 HSPs)
chr7 (7-135)||(30524291-30524418)
chr7 (11-142)||(39342531-39342661)
chr7 (9-113)||(45984378-45984482)
chr7 (9-113)||(45988738-45988842)
chr7 (40-135)||(40495786-40495880)
chr7 (9-135)||(13814890-13815015)
chr7 (9-135)||(30587799-30587924)
chr7 (9-135)||(40667379-40667504)
chr7 (18-135)||(42816596-42816712)
chr7 (11-135)||(14603158-14603281)
chr7 (19-135)||(40495278-40495393)
chr7 (20-135)||(3905555-3905669)
chr7 (19-146)||(9784816-9784942)
chr7 (19-130)||(23455148-23455258)
chr7 (9-135)||(14790151-14790276)
chr7 (9-130)||(32650611-32650731)
chr7 (19-135)||(28539064-28539179)
chr7 (11-135)||(35455844-35455967)
chr7 (9-135)||(30080697-30080822)
chr7 (40-109)||(36328717-36328786)
chr7 (11-135)||(30629097-30629220)
chr7 (7-135)||(43791126-43791253)
chr7 (40-135)||(23548507-23548601)
chr7 (52-135)||(26416034-26416116)
chr7 (21-135)||(33310854-33310967)
chr7 (9-130)||(25189127-25189247)
chr7 (40-113)||(41443017-41443090)
chr7 (7-135)||(22391484-22391610)
chr7 (9-135)||(19865450-19865575)
chr7 (20-130)||(45966996-45967105)
chr7 (20-107)||(15990940-15991027)
chr7 (38-113)||(18926738-18926813)
chr7 (19-87)||(18789189-18789257)
chr7 (19-87)||(18789565-18789633)
chr7 (40-108)||(37460829-37460897)
chr7 (60-135)||(23695995-23696069)
chr7 (79-128)||(18938915-18938963)
chr7 (72-108)||(5976497-5976533)
[»] chr5 (36 HSPs)
chr5 (11-142)||(41762115-41762245)
chr5 (19-135)||(31316209-31316324)
chr5 (9-135)||(33146211-33146336)
chr5 (6-135)||(32250005-32250133)
chr5 (9-135)||(17542268-17542393)
chr5 (9-104)||(37241047-37241142)
chr5 (19-113)||(9894250-9894344)
chr5 (21-135)||(28489513-28489626)
chr5 (7-135)||(10314685-10314812)
chr5 (7-130)||(14834860-14834982)
chr5 (9-135)||(15270761-15270886)
chr5 (22-135)||(12479958-12480070)
chr5 (22-135)||(34105122-34105234)
chr5 (19-135)||(927350-927464)
chr5 (7-135)||(22303777-22303904)
chr5 (44-135)||(8264581-8264671)
chr5 (52-130)||(37241510-37241587)
chr5 (52-113)||(30519084-30519145)
chr5 (52-113)||(30559424-30559485)
chr5 (9-113)||(22305132-22305236)
chr5 (7-135)||(35379379-35379505)
chr5 (59-135)||(40089724-40089799)
chr5 (44-135)||(35111299-35111389)
chr5 (19-135)||(6772120-6772233)
chr5 (22-135)||(17493072-17493184)
chr5 (19-135)||(31367936-31368052)
chr5 (41-105)||(22302592-22302656)
chr5 (8-100)||(22766989-22767081)
chr5 (19-107)||(17444364-17444451)
chr5 (40-133)||(11601108-11601199)
chr5 (10-107)||(17492582-17492679)
chr5 (10-94)||(28490031-28490115)
chr5 (48-135)||(11409258-11409344)
chr5 (40-96)||(12991276-12991332)
chr5 (40-96)||(13064899-13064955)
chr5 (79-113)||(9894080-9894114)
[»] chr6 (11 HSPs)
chr6 (9-135)||(8475199-8475324)
chr6 (19-135)||(15616271-15616386)
chr6 (10-135)||(31412940-31413064)
chr6 (9-135)||(1195371-1195496)
chr6 (52-130)||(10105120-10105197)
chr6 (7-135)||(1368513-1368639)
chr6 (7-135)||(28918201-28918327)
chr6 (40-135)||(9697531-9697625)
chr6 (7-135)||(6358161-6358288)
chr6 (19-113)||(26901695-26901789)
chr6 (7-76)||(15832502-15832571)
[»] scaffold0169 (1 HSPs)
scaffold0169 (7-135)||(4111-4237)
[»] scaffold0014 (2 HSPs)
scaffold0014 (7-135)||(221106-221233)
scaffold0014 (48-135)||(223659-223745)
[»] chr8 (30 HSPs)
chr8 (11-135)||(29257271-29257394)
chr8 (7-135)||(31980403-31980530)
chr8 (9-135)||(26520359-26520484)
chr8 (9-135)||(34008819-34008944)
chr8 (7-135)||(14274-14401)
chr8 (19-135)||(29482727-29482842)
chr8 (11-135)||(44346598-44346721)
chr8 (38-135)||(40734021-40734117)
chr8 (7-135)||(9982672-9982799)
chr8 (19-135)||(33377217-33377332)
chr8 (42-135)||(1088196-1088289)
chr8 (19-135)||(13144631-13144746)
chr8 (7-135)||(24044996-24045123)
chr8 (8-127)||(8049291-8049409)
chr8 (37-130)||(31976507-31976599)
chr8 (40-113)||(34388576-34388649)
chr8 (7-135)||(33986040-33986167)
chr8 (40-111)||(6416253-6416324)
chr8 (7-113)||(28324603-28324709)
chr8 (52-113)||(24510218-24510279)
chr8 (19-113)||(35978948-35979039)
chr8 (56-135)||(36625145-36625223)
chr8 (52-142)||(10593152-10593241)
chr8 (40-135)||(15186737-15186831)
chr8 (22-113)||(35404683-35404774)
chr8 (52-142)||(7079411-7079500)
chr8 (8-106)||(44889391-44889489)
chr8 (56-113)||(43167667-43167724)
chr8 (62-113)||(6460827-6460878)
chr8 (9-86)||(29611408-29611485)
[»] chr4 (33 HSPs)
chr4 (7-135)||(29091173-29091300)
chr4 (40-135)||(53760700-53760794)
chr4 (19-135)||(2125905-2126020)
chr4 (19-135)||(35470170-35470285)
chr4 (7-135)||(41139509-41139636)
chr4 (40-135)||(10354411-10354505)
chr4 (27-146)||(46242443-46242561)
chr4 (9-135)||(27284572-27284697)
chr4 (9-142)||(56339171-56339303)
chr4 (40-135)||(4490096-4490190)
chr4 (40-135)||(13318569-13318663)
chr4 (40-135)||(40548128-40548222)
chr4 (40-135)||(42776153-42776247)
chr4 (9-135)||(17727103-17727228)
chr4 (22-111)||(42776688-42776777)
chr4 (42-135)||(46243007-46243099)
chr4 (7-135)||(16516207-16516335)
chr4 (7-135)||(26534529-26534656)
chr4 (47-135)||(54566251-54566338)
chr4 (52-135)||(24705432-24705514)
chr4 (20-135)||(40338162-40338276)
chr4 (9-135)||(42775643-42775771)
chr4 (34-110)||(29686010-29686086)
chr4 (19-135)||(52294955-52295070)
chr4 (56-135)||(47108365-47108443)
chr4 (40-105)||(31947660-31947725)
chr4 (42-103)||(19461677-19461738)
chr4 (79-135)||(13088635-13088690)
chr4 (22-142)||(30303772-30303891)
chr4 (19-135)||(52493972-52494086)
chr4 (57-111)||(17727014-17727068)
chr4 (73-130)||(16300133-16300189)
chr4 (35-135)||(24062835-24062934)
[»] scaffold0400 (1 HSPs)
scaffold0400 (40-135)||(4408-4502)
[»] scaffold0365 (1 HSPs)
scaffold0365 (40-135)||(5052-5146)
[»] scaffold0318 (1 HSPs)
scaffold0318 (7-135)||(2903-3029)
[»] scaffold0129 (2 HSPs)
scaffold0129 (7-135)||(19695-19822)
scaffold0129 (40-98)||(19266-19324)
[»] scaffold0301 (1 HSPs)
scaffold0301 (11-135)||(7191-7314)
[»] scaffold0337 (2 HSPs)
scaffold0337 (35-127)||(15784-15875)
scaffold0337 (42-130)||(16289-16376)
[»] scaffold0065 (2 HSPs)
scaffold0065 (35-113)||(2839-2917)
scaffold0065 (21-130)||(9501-9609)
[»] scaffold0047 (1 HSPs)
scaffold0047 (19-135)||(50217-50332)
[»] scaffold0039 (1 HSPs)
scaffold0039 (9-135)||(109069-109193)
[»] scaffold0417 (1 HSPs)
scaffold0417 (59-135)||(11865-11941)


Alignment Details
Target: chr2 (Bit Score: 305; Significance: 1e-171; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 7 - 414
Target Start/End: Original strand, 11036378 - 11036782
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    |||||||||||  |||||| ||||||||| ||||||||| ||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  11036378 gtaatgttttaaaggaattcaaatacattgagatgaattttattattagaataataatttgaagaatttttaaaatgatggaaatttatgaagtattttg 11036477  T
Q  107 ttcaagtaaaaatttagagaatttaaaataataccttcaatattacaattcaccctcccaaaccccctacatcatagaagtgatttggcatcccccatct 206  Q
    |||||||| || |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11036478 ttcaagtataa-tttaaagaatttaaaatgataccttcaatattacaattcaccctcccaaaccccctacatcatagaagtgatttggcatcccccgtct 11036576  T
Q  207 cccaaccggatgaaatgtaatactaatggtgcagctgcaggaactccatccatggctgcttgcggaggcttgttcagaaatcaggaagctatttgtattg 306  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  11036577 cccaaccggataaaatgtaatactaatggtgcagctgtaggaactccatccatggctgcttgcggaggcttgttcagaaatcaggaagctatttgtatag 11036676  T
Q  307 gatgttttgctcataatttaggtccaagttcatcttaatttgctgaattaccaagtgttatgcatgcaaaattgagatagcacacaacaatggttggtta 406  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||| || ||| |||||||||  |||||||||||||||||||||||||||||||    
T  11036677 gatgttttgctcataatttaggttcaagttcatcttaatttgttgaattatcaggtgctatgcatgc--aattgagatagcacacaacaatggttggtta 11036774  T
Q  407 catctctg 414  Q
    ||||||||    
T  11036775 catctctg 11036782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 414
Target Start/End: Original strand, 20692346 - 20692620
Alignment:
Q  142 ttcaatattacaattcaccctcccaaaccccct-acatcatagaagtgatttggcatcccccatctcccaaccggatgaaatgtaatactaatggtgcag 240  Q
    |||||||| |||||||||||||||||||| |   |||| | |||||||||||||| |||||||  |  |||| |||| |||||||||||  |||| || |    
T  20692346 ttcaatatcacaattcaccctcccaaaccacgagacattagagaagtgatttggcctcccccagatttcaactggataaaatgtaatacggatggagctg 20692445  T
Q  241 ctgcaggaactcc---atccatggctgcttgcggaggcttgttcagaaatcaggaagctatttgtattggatgttttgctcataatttaggtccaagttc 337  Q
    |||| ||||| ||   |||  ||| |||||| || || ||||||||||| || |||||| ||||||| || || |||||||| |||||||||||| ||||    
T  20692446 ctgccggaacccctgcatctttgggtgcttgtgggggtttgttcagaaaccaagaagctctttgtataggttgctttgctcagaatttaggtccaggttc 20692545  T
Q  338 atcttaatttgctgaattaccaagtgttatgcatgcaaaattgagatagcacacaacaatggttggttacatctctg 414  Q
    ||||| ||||||||||||| || ||| |||||| ||   |||||||||||||||||||| || ||||||||||||||    
T  20692546 atctttatttgctgaattatcaggtgctatgcaggc--tattgagatagcacacaacaaaggctggttacatctctg 20692620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 1583842 - 1583719
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  1583842 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagtattttcaaaatgatggaaatttatgaagtattttgttca 1583743  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  1583742 agt-taaatttagagaattttaaat 1583719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 7309796 - 7309673
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  7309796 tgttttaagggaattcaaatactttggggtgaattccattatttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 7309697  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  7309696 agt-taaatttagagaatttcaaat 7309673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 769076 - 769206
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  769076 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 769175  T
Q  111 agtaaaaatttagagaatttaaaataatacct 142  Q
    |||  ||||||||||||||| |||||| ||||    
T  769176 agt-taaatttagagaatttcaaataacacct 769206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 33189290 - 33189160
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  33189290 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 33189191  T
Q  111 agtaaaaatttagagaatttaaaataatacct 142  Q
    |||  ||||||||||||||| |||||| ||||    
T  33189190 agt-taaatttagagaatttcaaataacacct 33189160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 11141345 - 11141468
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||  ||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11141345 tgttttaagggaattcaaatactttggggtgaattacattgtttggataataatttgaagtattttcaaaatgatggaaatttatgaagtattttgttca 11141444  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  11141445 agt-taaatttagagaattttaaat 11141468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 44255703 - 44255797
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  44255703 tgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 44255797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 8736476 - 8736351
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  8736476 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 8736377  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  8736376 caagt-taaatttagagaatttcaaat 8736351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 39630294 - 39630387
Alignment:
Q  41 gaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  39630294 gaattctattgtttggataataatttgaactattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 39630387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 32840227 - 32840095
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  |||||||||||||| || || ||||||  ||| ||||||||||||||||||| |||||  |||||||||||||| ||||||||||||| |    
T  32840227 aatgttttgagggaatttaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaattcatgaagtattttggt 32840128  T
Q  109 caagtaaaaatttagagaatttaaaataatacct 142  Q
    |||||  ||||||||||||||| |||||| ||||    
T  32840127 caagt-caaatttagagaatttgaaataacacct 32840095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 45094507 - 45094381
Alignment:
Q  8 taatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgt 107  Q
    |||||||||  |||||||||| ||| || |  ||||||| ||| ||||||||| ||||||||| |||||  |||||||||||||||||||||||||||||    
T  45094507 taatgttttgagggaatttaactactttaaagtgaattccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 45094408  T
Q  108 tcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||  ||||||||||||||| ||||    
T  45094407 tcaagt-taaatttagagaatttcaaat 45094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 1730101 - 1730215
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    |||||||||||||| || |||||||||  ||| ||||||||||||||||||| |||||  ||||||||| ||||||||||| |||||||||||||  |||    
T  1730101 gggaatttaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatgg-aatttatgaagaattttgttcaagt-taaa 1730198  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  1730199 tttagagaatttcaaat 1730215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 41585725 - 41585600
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  |||| | |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  41585725 aatgttttgagggaattcaaatactttgaagtgaaatttattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 41585626  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
     ||||  ||||||| ||||||| ||||    
T  41585625 gaagt-taaatttaaagaatttcaaat 41585600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 13017815 - 13017941
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||| ||||| ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  |||||||| ||||||||||| || ||||    
T  13017815 gtaatattttaagggaattcaaatactttgaggtgaattccattgtttggataataatttgaaggattttcaaaatgatgaaaatttatgaaata-tttg 13017913  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  13017914 ttcaagt-taaatttagagaatttcaaat 13017941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 35047712 - 35047589
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| | | ||||||||||||||||||| |||||  |||| |||||||||||| ||||||||||||||    
T  35047712 tgttttaagggaattcaaatactttggggtgaattccaatgtttggataataatttgaagcattttcaaaataatggaaatttataaagtattttgttca 35047613  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  35047612 agt-taaatttagagaatttcaaat 35047589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 6749238 - 6749320
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  6749238 tttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttaaagaatttcaaat 6749320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 12263507 - 12263589
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||||||||||| | ||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  12263507 tttggataataatttgaaattttttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 12263589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 32839685 - 32839563
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || |  ||||||| ||| ||||||||||||||||||| |||||  ||||||||||| || |||||||||||||    
T  32839685 gtaatgttttgagggaattcaaatactttgacgtgaattccattgtttggataataatttgaagaattttccaaatgatggaatttcatgaagtattttg 32839586  T
Q  107 ttcaagtaaaaatttagagaattt 130  Q
     ||||||  |||||||||||||||    
T  32839585 gtcaagt-caaatttagagaattt 32839563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 7228049 - 7227943
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   ||||||||||||| || || | ||||  ||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  7228049 gtaatgttttgaaggaatttaaataccttgaggtaaatttcattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 7227950  T
Q  107 ttcaagt 113  Q
    |||||||    
T  7227949 ttcaagt 7227943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 20935744 - 20935869
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  ||||||| ||| ||||||| ||||||||||| |||||  ||||||| ||||||||||||||||||||||    
T  20935744 aatgttttgagggaattcaaatactttgatgtgaattccattgtttggatgataatttgaagaattttcaaaatgattgaaatttatgaagtattttgtt 20935843  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
     ||||  ||||||||||||||| ||||    
T  20935844 taagt-taaatttagagaatttcaaat 20935869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 3092353 - 3092445
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||| ||| ||||||||||||||| ||| |||||  ||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  3092353 aattccattgtttggataataatttcaagcattttcaaaatgatagaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 3092445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 7167704 - 7167577
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||  ||| ||||| ||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  7167704 gtaatgttttgaaggaattcaaatactttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 7167605  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  7167604 ttcaagt-taaatgtagagaatttcaaat 7167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 7611913 - 7611798
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || |  ||||||| ||| ||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||  |||    
T  7611913 gggaattcaaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgatggaaatttatgaagtattttgtccaagt-taaa 7611815  T
Q  119 tttagagaatttaaaat 135  Q
    |||| ||||||| ||||    
T  7611814 tttaaagaatttcaaat 7611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 17905690 - 17905815
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    |||||||||||  |||||| |||||  || || ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||| || ||||    
T  17905690 gtaatgttttaaaggaattcaaatattttgaggtgaattccatt-tttggataataatttgaaggattttcaaaatgatggaaatttatgaaata-tttg 17905787  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  17905788 ttcaagt-taaatttagagaatttcaaat 17905815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 28740632 - 28740759
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || |  | ||||| ||| ||| ||| ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  28740632 gtaatgttttgagggaattcaaatactttgatgtaaattccattgtttagatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttg 28740731  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||| ||||||| ||||    
T  28740732 ttcaagt-taaatttaaagaatttcaaat 28740759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 30698317 - 30698444
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||  ||| ||||||||||| ||||||| |||||  ||||||||||||||| ||||||||||||    
T  30698317 gtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttggataatagtttgaagaattttcaaaatgatggaaatttgtgaagtattttg 30698416  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  30698417 ttcaagt-taaatgtagagaatttcaaat 30698444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 740773 - 740867
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||| |||| |||| || ||||||||||| |||||  |||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  740773 tgaattttattgtttgaatgataatttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 740867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 21504488 - 21504604
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||  || |||||||||| ||| |||| |||||||||||||| |||||  |||||| |  ||||||||||||||||||||    
T  21504488 aatgttttgagggaattcaaatattttgagatgaattccattgtttgaataataatttgaagaattttcaaaatgaagttaatttatgaagtattttgtt 21504587  T
Q  109 caagtaaaaatttagaga 126  Q
    |||||  |||||||||||    
T  21504588 caagt-taaatttagaga 21504604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 44205693 - 44205597
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtatttt 105  Q
    ||||||||  ||||||| |||||| ||||  | ||||||||||||||||| |||| |||||| |||||  |||||||||||||||||||||| ||||    
T  44205693 aatgttttgagggaattcaaatacttttatgtaaattctattatttggatgataaattgaagaattttgaaaatgatggaaatttatgaagtgtttt 44205597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 14306799 - 14306717
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||||||| ||  |||||| |||||||| ||||||||||| ||||||||||||||  ||||||| ||||||| ||||    
T  14306799 tttggataataatttaaataatttttaaaatgatgaaaatttatgaattattttgttcaagt-taaatttaaagaatttcaaat 14306717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 2274819 - 2274699
Alignment:
Q  13 ttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaag 112  Q
    ||||| ||||||| |||||  ||||||| ||||| ||| ||||||||| |||| ||  | ||||  |||||||||| |||||||||| ||||||||||||    
T  2274819 ttttaagggaattcaaatatttttagatcaattccattgtttggataagaattggagat-ttttcaaaatgatggagatttatgaagaattttgttcaag 2274721  T
Q  113 taaaaatttagagaatttaaaat 135  Q
    |  ||||||||||||||| ||||    
T  2274720 t-taaatttagagaatttcaaat 2274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 28022088 - 28022014
Alignment:
Q  60 ataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||| ||||   |||||||| |||||||||| |||||||||||||||  ||||||||||||||| ||||    
T  28022088 ataatttgaagaatttgcaaaatgatgaaaatttatgaggtattttgttcaagt-taaatttagagaatttcaaat 28022014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 40026101 - 40026192
Alignment:
Q  8 taatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaag 99  Q
    |||||||||  || ||||||||||| || || ||||||||||| |||| |||||| ||| || | ||||| |||||||| ||||||||||||    
T  40026101 taatgttttgaggaaatttaaatactttgaggtgaattctattgtttgaataatagttttaaatttttttaaaatgatgtaaatttatgaag 40026192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 42941047 - 42941096
Alignment:
Q  85 tggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  42941047 tggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 42941096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 2924832 - 2924887
Alignment:
Q  79 aaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||| |||||||| ||||||||||||||||| |||| ||||||||||| ||||    
T  2924832 aaatgatgaaaatttattaagtattttgttcaagttaaaa-ttagagaatttcaaat 2924887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 181 - 411
Target Start/End: Original strand, 2949278 - 2949505
Alignment:
Q  181 tagaagtgatttggcatcccccatctcccaaccggatgaaatgtaatactaatggtgcagctgcaggaactccatccatggctgcttgcggaggcttgtt 280  Q
    |||||||||||||||||||||| |||  |||| || | |||| ||| ||| ||||||||||  || |||||||||| ||||||||||| || ||||||||    
T  2949278 tagaagtgatttggcatcccccgtctttcaactgggtaaaatataacactgatggtgcagcaacatgaactccatctatggctgcttgtgggggcttgtt 2949377  T
Q  281 cagaaatcaggaagctatttgtattggatgttttgctcataatttaggtccaagttcatcttaatttgctgaattaccaagtgttatgcatgcaaaattg 380  Q
    || ||||||||||||||| ||||| || ||||||||||| |||||||| ||| ||| ||||| |||||||||||||||| ||| || ||| ||  ||||     
T  2949378 cataaatcaggaagctatctgtataggttgttttgctca-aatttaggcccaggtttatctttatttgctgaattaccaggtgctacgcaagc--aatta 2949474  T
Q  381 agatagcacacaacaatggttggttacatct 411  Q
    |||||||||||||||||||||||||||||||    
T  2949475 agatagcacacaacaatggttggttacatct 2949505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 7976584 - 7976711
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||||||||||||| || ||||||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  7976584 gtaatgttttgaaggaatttaaatacattgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatggaaatttatgaagtattttg 7976683  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  7976684 ttcaagt-taaatttagagaatttcaaat 7976711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 53129879 - 53129752
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| ||||||| |||||| ||  | ||||||| ||| |||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  53129879 gtaatgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagtattttcaaaatgatgaaaatttatgaagtattttg 53129780  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  53129779 ttcaagt-taaatttagagaatttcaaat 53129752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 46706706 - 46706822
Alignment:
Q  25 ttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttaga 124  Q
    |||||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||  |||||||||    
T  46706706 ttaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttttttcaagt-taaatttaga 46706804  T
Q  125 gaatttaaaataatacct 142  Q
    |||||| |||| ||||||    
T  46706805 gaatttcaaatgatacct 46706822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 2104782 - 2104897
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || |  ||||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  2104782 gggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 2104880  T
Q  119 tttagagaatttaaaat 135  Q
    |||| ||||||| ||||    
T  2104881 tttaaagaatttcaaat 2104897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 43863974 - 43863860
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||| | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  43863974 gggaattcaaatac-tttgggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 43863877  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  43863876 tttagagaatttcaaat 43863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 48947674 - 48947768
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  48947674 tgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 48947768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 36398013 - 36397898
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| || |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  36398013 gggaattcaaatactttggggtgaattccattgttcggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 36397915  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  36397914 tttagagaatttcaaat 36397898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 53470453 - 53470338
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||  ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  53470453 gggaattcaaatactttggggtgaatttcattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 53470355  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  53470354 tttagagaatttcaaat 53470338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 671622 - 671528
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||| ||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  671622 tgaattccattgtttgggtaataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 671528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 35279913 - 35279831
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  35279913 tttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 35279831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 26323394 - 26323519
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  || |||| |||||| ||||| |||||||  || |||||||||||||||  || |||||  ||||||||||||||||||||||||||||||    
T  26323394 aatgttttgaggtaattcaaatacttttaggtgaattccgttgtttggataataatttataggattttcaaaatgatggaaatttatgaagtattttgtt 26323493  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  26323494 caagt-caaatttagagaatttcaaat 26323519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 7302382 - 7302509
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| | |||| || || ||||||| ||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  7302382 gtaatgttttgaaggaattcagataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 7302481  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||  ||||||||||||||    
T  7302482 ttcaagt-taaatgcagagaatttaaaat 7302509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 21307568 - 21307441
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || || ||||||| ||| |||||||||||||||| |  |||||  ||||||| |||||||||||||||||||     
T  21307568 gtaatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgtaaaattttcaaaatgatagaaatttatgaagtatttta 21307469  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  21307468 ttcaagt-taaatttagagaatttcaaat 21307441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 26547099 - 26547178
Alignment:
Q  55 ggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  26547099 ggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 26547178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 34088619 - 34088734
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| || |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||| |  |||    
T  34088619 gggaattcaaatactttggggtgaattccattgttaggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaaat-taaa 34088717  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  34088718 tttagagaatttcaaat 34088734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 38506910 - 38506799
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||  || || ||||||| ||| |||| |||||||||||||| |||||  ||||||||||||||||| ||||||||||||    
T  38506910 aatgttttgagggaattcaaataatttgaggtgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttataaagtattttgtt 38506811  T
Q  109 caagtaaaaatt 120  Q
    ||||| ||||||    
T  38506810 caagttaaaatt 38506799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 47284227 - 47284117
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || | |||||||| ||| |||| |||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||  |||    
T  47284227 gggaattcaaatactttgatatgaattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaagt-taaa 47284129  T
Q  119 tttagagaattt 130  Q
    |||| |||||||    
T  47284128 tttaaagaattt 47284117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 47336932 - 47337044
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaattt 121  Q
    ||||||||||  ||||| ||||||| ||| ||||||| |||||||  || |||||  ||||||| |||||||||||||||||||||||||||  ||||||    
T  47336932 aatttaaatatgtttaggtgaattccattgtttggatgataatttatagaattttaaaaatgatagaaatttatgaagtattttgttcaagt-taaattt 47337030  T
Q  122 agagaatttaaaat 135  Q
    ||||||||| ||||    
T  47337031 agagaatttcaaat 47337044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 37054430 - 37054557
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||  ||| ||||| ||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  37054430 gtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 37054529  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  37054530 ttcaagt-taaatgtagagaatttcaaat 37054557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 42005989 - 42005862
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   ||||||||||||| || || ||||||  ||| ||||| ||||| ||||||| |||||  |||||||| |||||||||||||||||||    
T  42005989 gtaatgttttgaaggaatttaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatgaaaatttatgaagtattttg 42005890  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  42005889 ttcaagt-taaatgtagagaatttcaaat 42005862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 47767468 - 47767572
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||  ||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  47767468 gtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 47767567  T
Q  107 ttcaa 111  Q
    |||||    
T  47767568 ttcaa 47767572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 31021727 - 31021822
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaa-tgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||| |||||| || |  ||||||||||| |||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||| |||||    
T  31021727 gggaattcaaatactttgatgtgaattctattgtttgcataataatttgaagaatttttcaaaatgatggaaatttatgaagtattttgtccaagt 31021822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 52527085 - 52527199
Alignment:
Q  20 ggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaat 119  Q
    |||||| |||||| || || | ||||| ||| ||||| | ||||||||||| |||||  |||| ||||||||||||||||||||||||||||||  ||||    
T  52527085 ggaattcaaatactttgaggtaaattccattgtttggttgataatttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagt-taaat 52527183  T
Q  120 ttagagaatttaaaat 135  Q
    ||||||||||| ||||    
T  52527184 ttagagaatttcaaat 52527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 21730967 - 21731064
Alignment:
Q  37 agatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||  ||| |||| |||||||||| ||  |||||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||    
T  21730967 agatgaatttcattgtttgaataataatttaaacaatttttaaaatgatggaaatttatgaactattttgttcaagt-taaatttagagaatttcaaat 21731064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 30766589 - 30766695
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||| ||| ||||||||||| ||||||| |||||  ||| ||| ||||||||||||||||||||    
T  30766589 gtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaaagatagaaatttatgaagtattttg 30766688  T
Q  107 ttcaagt 113  Q
    |||||||    
T  30766689 ttcaagt 30766695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 6837050 - 6836968
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||| |||||||||||||| |||||  ||||||| ||||||||||||| |||||||||||||  ||||||||||||||| ||||    
T  6837050 tttgaataataatttgaagaattttcaaaatgatagaaatttatgaagcattttgttcaagt-taaatttagagaatttcaaat 6836968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 30767174 - 30767239
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtatttt 105  Q
    ||||||| ||| ||||| ||||||||||||| |||||  |||||||||||||||||||||||||||    
T  30767174 tgaattccattgtttgggtaataatttgaagaattttcaaaatgatggaaatttatgaagtatttt 30767239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 36635983 - 36636039
Alignment:
Q  72 atttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatt 129  Q
    |||||| ||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  36635983 atttttaaaatgatggaaatttatgaaggattttgttcaagt-taaatttagagaatt 36636039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 34396474 - 34396419
Alignment:
Q  79 aaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||| ||||    
T  34396474 aaatgatgggaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 34396419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 55460378 - 55460482
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| | ||  ||||||| ||  ||||||| |||||| | || |||||  |||||||||||||||| |||||||||||||    
T  55460378 aatgttttgagggaattcaaatacttgtaagtgaattccatcgtttggatgataattaggagaattttcaaaatgatggaaatttacgaagtattttgtt 55460477  T
Q  109 caagt 113  Q
    |||||    
T  55460478 caagt 55460482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 44288454 - 44288368
Alignment:
Q  48 attatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||| |||||||| || || ||| ||||  || ||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  44288454 attatttggatgataatttggagaatctttaaaatattgaaaatttatgaagtattttgttcaagt-taaatttagataatttcaaat 44288368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 46635927 - 46636009
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||| ||||||||||| || |||||  |||||||| |||||||||||| |||||||| ||||  ||||||||||||||| ||||    
T  46635927 tttgaataataatttggagaattttcaaaatgatgaaaatttatgaagcattttgtttaagt-taaatttagagaatttcaaat 46636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 50168619 - 50168540
Alignment:
Q  34 tttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||| ||||||| ||| ||||||||||||| || || |||||  ||| |||||||||| ||||||| ||||||||||||    
T  50168619 tttagctgaattccattgtttggataataatatggagaattttcaaaaggatggaaattaatgaagttttttgttcaagt 50168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 31189433 - 31189298
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  | ||||| |||||| || || | |||| |||  ||||| | ||||||| ||  |||||| | |||||||||| |||||||||||||||    
T  31189433 gtaatgttttgagagaattcaaatactttgaggtaaattttatcgtttgggtgataatttaaataatttttaagatgatggaaacttatgaagtattttg 31189334  T
Q  107 ttcaagtaaaaatttagagaatttaaaataatacctt 143  Q
    || ||||  ||||||| ||||||| |||||| |||||    
T  31189333 tttaagt-taaatttatagaatttcaaataacacctt 31189298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 40493140 - 40493208
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||||||||||||| |||||||| || || ||| || | ||| ||||||||||| |||||||||||    
T  40493140 aattctattatttggatgataatttggagaatgtttaaagtaatgaaaatttatgaactattttgttca 40493208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 32665975 - 32666021
Alignment:
Q  61 taatttgaagtatttttgaaatgatggaaatttatgaagtattttgt 107  Q
    |||||||||| |||||| ||||| || ||||||||||||||||||||    
T  32665975 taatttgaagaatttttaaaatgctgaaaatttatgaagtattttgt 32666021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 48825110 - 48825041
Alignment:
Q  60 ataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||||||||| |||||| |||||||  |||||||| || ||||||||||||||  ||||||| |||||||    
T  48825110 ataatttgaagaatttttaaaatgataaaaatttataaaatattttgttcaagt-taaatttaaagaattt 48825041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 25547441 - 25547377
Alignment:
Q  48 attatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||||| |||||||| || |||||| |||| || |||| ||||||||||||||||| ||||    
T  25547441 attatttggatgataatttgtagaatttttaaaataattgaaa-ttatgaagtattttgtttaagt 25547377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 28182215 - 28182160
Alignment:
Q  73 tttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  28182215 tttttaaaatgatggaaatttatgaagta-cttgttcaagt-taaatttagagaattt 28182160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 946423 - 946537
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  946423 gggaatttaaatac-tttggatgaattctattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 946520  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  946521 tttagagaatttcaaat 946537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 41822578 - 41822453
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |||||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  41822578 aatgttttgagggaattcaaatactttaagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 41822479  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    ||||| |||| ||||||||||| ||||    
T  41822478 caagttaaaa-ttagagaatttcaaat 41822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 41822733 - 41822607
Alignment:
Q  9 aatgttttacgggaattt-aaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgt 107  Q
    ||||||||  |||||||| |||||| || |||||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  41822733 aatgttttgagggaatttcaaatactttgagatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgt 41822634  T
Q  108 tcaagtaaaaatttagagaatttaaaat 135  Q
    |||||| |||| ||||||||||| ||||    
T  41822633 tcaagttaaaa-ttagagaatttcaaat 41822607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 137
Target Start/End: Original strand, 49659264 - 49659381
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    |||||||||||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||  |||    
T  49659264 gggaatttaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattttgttcaagt-taaa 49659362  T
Q  119 tttagagaatttaaaataa 137  Q
    |||||||||||| ||||||    
T  49659363 tttagagaatttcaaataa 49659381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 15467996 - 15467873
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  15467996 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 15467897  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  15467896 agt-taaatttagagaatttcaaat 15467873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 13181636 - 13181751
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || |||| |||| |||| ||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||||||  |||    
T  13181636 gggaattcaaatactttgagattaattatattttttggataataatttgaagaatattcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 13181734  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  13181735 tttagagaatttcaaat 13181751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 44570714 - 44570841
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||| ||| ||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  44570714 gtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcgaaatgatggaaatttatgaagtattttg 44570813  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  44570814 ttcaagt-taaatatagagaatttcaaat 44570841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 48953637 - 48953731
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||| ||||||||||||||||||| |||||  |||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  48953637 tgaattctattgtttggataataatttgaagaattttcaaaatgatggatatttatgaagtattttgttcaagt-caaatttagagaatttgaaat 48953731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 37 - 135
Target Start/End: Original strand, 31166376 - 31166473
Alignment:
Q  37 agatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||||||| |||| |||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  31166376 agatgaattctattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttatagaatttcaaat 31166473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 20 - 142
Target Start/End: Complemental strand, 41823184 - 41823063
Alignment:
Q  20 ggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaat 119  Q
    |||||| |||||| || |||||||||| ||| ||||||||||| ||||||| |||||  |||| ||||||||||||||||||||||||||||||  ||||    
T  41823184 ggaattcaaataccttgagatgaattccattgtttggataatagtttgaagaattttcaaaataatggaaatttatgaagtattttgttcaagt-taaat 41823086  T
Q  120 ttagagaatttaaaataatacct 142  Q
     |||||||||| |||||| ||||    
T  41823085 gtagagaatttcaaataacacct 41823063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 47820253 - 47820355
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||  ||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  47820253 tgttttaagggaattcaaatactttagggtgaatttcattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgttca 47820352  T
Q  111 agt 113  Q
    |||    
T  47820353 agt 47820355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 52135660 - 52135535
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||  ||||| | |||| |||| ||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  52135660 aatgttttgagggaattcaaatatttttaggtaaattttattgtttggatgataatttgaagaatttttaaaatgatggaaatttatgaagtattttgtt 52135561  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    ||||| ||| ||| |||||||| ||||    
T  52135560 caagttaaagttt-gagaatttcaaat 52135535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 8224804 - 8224931
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || |  ||||||| ||| ||||||| ||||||| ||| |||||  ||||||||||||||||||||||||||||    
T  8224804 gtaatgttttgagggaattgaaatactttgatgtgaattccattgtttggatgataatttaaagaattttcaaaatgatggaaatttatgaagtattttg 8224903  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  8224904 ttcaagt-taaatttagagaatttcaaat 8224931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 37447363 - 37447269
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||    
T  37447363 tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttggttcaagt-taaatttagagaatttcaaat 37447269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 39887196 - 39887290
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  39887196 tgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttaaagaatttcaaat 39887290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 35491207 - 35491320
Alignment:
Q  21 gaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatt 120  Q
    |||||||||||  || | |||||||  ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||  |||||    
T  35491207 gaatttaaatattttgatatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgctcaagt-taaatt 35491305  T
Q  121 tagagaatttaaaat 135  Q
    |||||||||| ||||    
T  35491306 tagagaatttcaaat 35491320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 37447939 - 37447833
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||| ||| ||||||||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  37447939 gtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 37447840  T
Q  107 ttcaagt 113  Q
    |||||||    
T  37447839 ttcaagt 37447833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 44571239 - 44571364
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  ||||||| ||| ||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||    
T  44571239 aatgttttgagggaattcaaatactttgaagtgaattccattgtttggataataatttaaagaatttttaaaatgatggaaatttataaagtattttgtt 44571338  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||   |||||||||||||| ||||    
T  44571339 caagt-tgaatttagagaatttcaaat 44571364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 34003511 - 34003631
Alignment:
Q  21 gaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatt 120  Q
    ||||| |||||| || || ||||||| ||| ||||||| ||||||||| | ||| |  |||||||||||||||||||| ||||||||||||||  |||||    
T  34003511 gaattcaaatactttgaggtgaattccattgtttggatgataatttgatgaattatcaaaatgatggaaatttatgaaatattttgttcaagt-taaatt 34003609  T
Q  121 tagagaatttaaaataatacct 142  Q
    ||||||||||||||||| ||||    
T  34003610 tagagaatttaaaataacacct 34003631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 28632590 - 28632496
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||| ||| |||||  |||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  28632590 tgaattccattgtttggataataatttaaagaattttcaaaatgatgaaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 28632496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 37036951 - 37036859
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||| ||| || |||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  37036951 aattccattgttcggataataatttgaagaattttcaaaatgatagaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 37036859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 49216327 - 49216248
Alignment:
Q  55 ggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  49216327 ggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 49216248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 946982 - 947076
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  ||||||| |||||||||||| ||||||||||||||  ||||||| ||||||| ||||    
T  946982 tgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaaatattttgttcaagt-taaatttaaagaatttcaaat 947076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 32128068 - 32128193
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| ||  | ||||||| ||| |||  |||||||||||||| |||||  ||||||||| ||||||||| ||||||||||    
T  32128068 aatgttttgagggaattcaaatactttgtggtgaattccattgttttaataataatttgaagaattttcaaaatgatgggaatttatgaggtattttgtt 32128167  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  32128168 caagt-taaatttagagaatttcaaat 32128193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 37448438 - 37448311
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtat-ttt 105  Q
    ||||||||||  |||||||||||||| || |  ||||||| ||| |||||||| ||||||| || |||||  |||||||||||||||||||||||| |||    
T  37448438 gtaatgttttgagggaatttaaatactttgatgtgaattccattgtttggata-taatttggagaattttcaaaatgatggaaatttatgaagtatattt 37448340  T
Q  106 gttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||  ||||||| ||||||| ||||    
T  37448339 gttcaagt-taaatttaaagaatttcaaat 37448311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 50471798 - 50471887
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||| |||||| || || |||||| |||| ||||||||||||||| ||| |||||  ||||||||||||||| ||||||||||||||    
T  50471798 gggaattcaaatactttcaggtgaattttattgtttggataataatttaaagaattttcaaaatgatggaaatttttgaagtattttgtt 50471887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 6470723 - 6470596
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||| | || || || |||| ||| |||| |||||||||||||| |||||  ||||||||||||||||||||  | ||||    
T  6470723 gtaatgttttgagggaattcaaattctttgaggtggattccattgtttgaataataatttgaagaattttcaaaatgatggaaatttatgaaaaaatttg 6470624  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  6470623 ttcaagt-taaatttagagaatttcaaat 6470596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 21267835 - 21267721
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    |||||||| ||||| || |||| ||||  ||| ||||||||||||||||||| |||||  ||||||||| ||||||||||| ||||||||||| |  |||    
T  21267835 gggaatttgaatactttgagataaatttcattgtttggataataatttgaagaattttcaaaatgatgg-aatttatgaagaattttgttcaa-tttaaa 21267738  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  21267737 tttagagaatttcaaat 21267721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 42230801 - 42230879
Alignment:
Q  52 tttggataataattt-gaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  42230801 tttggataataattttgaagaatttttaaaatgatggaaatttatgaagtatcttgtttaagt-taaatttagagaattt 42230879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 31195507 - 31195619
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaattt 121  Q
    ||||||||||  || || ||||||| ||| |||| |||||||||||||| |||||| |||||||  ||||||| ||||||||||||| ||||  ||||||    
T  31195507 aatttaaatattttgaggtgaattccattgtttgtataataatttgaagaatttttaaaatgataaaaatttacgaagtattttgttaaagt-caaattt 31195605  T
Q  122 agagaatttaaaat 135  Q
    | ||||||| ||||    
T  31195606 aaagaatttgaaat 31195619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 32287924 - 32287863
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||||||||||||| ||||   ||||||||||||||||| |||||||||||||||||    
T  32287924 tttggataataatttgaagaatttccaaaatgatggaaatttataaagtattttgttcaagt 32287863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 32647382 - 32647444
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagta-ttttgttcaagt 113  Q
    |||||||| |||||||||| |||||  ||||||||||||||||||||||| ||||||||||||    
T  32647382 tttggatattaatttgaagcattttcaaaatgatggaaatttatgaagtatttttgttcaagt 32647444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 43623000 - 43622921
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagta 101  Q
    ||||||||||| || || ||||||  |||||||| |||||||||||||| |||||  |||||||| ||||||| ||||||    
T  43623000 aatttaaatactttgaggtgaatttcattatttgaataataatttgaagaattttcaaaatgatgaaaatttacgaagta 43622921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 23956354 - 23956272
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||||||||||  ||| |  | ||||||||||||||| ||||||||| |||||||  ||||||||||||||| ||||    
T  23956354 tttggattataatttgaaaaattatcaatatgatggaaatttataaagtattttattcaagt-taaatttagagaatttcaaat 23956272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 1902111 - 1902224
Alignment:
Q  21 gaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatt 120  Q
    ||||| |||| | ||||| | |||| |||| ||||||| |||||||  || |||||| |||||||||||||| |||| ||||||| |  |||| ||||||    
T  1902111 gaattcaaatccttttaggtaaattttattgtttggatgataatttagagaatttttaaaatgatggaaattcatgaggtattttctcgaagt-aaaatt 1902209  T
Q  121 tagagaatttaaaat 135  Q
    | |||||||| ||||    
T  1902210 ttgagaatttcaaat 1902224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 51847888 - 51847993
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    |||||||||||  | |||| |||||| ||||| ||||||| ||  ||||||| |||||||| || || ||   |||||||||||||||| ||||||||||    
T  51847888 gtaatgttttaaagaaattcaaatac-tttaggtgaattccatcgtttggatgataatttggagaatattaagaatgatggaaatttatcaagtattttg 51847986  T
Q  107 ttcaagt 113  Q
    || ||||    
T  51847987 tttaagt 51847993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 10166555 - 10166661
Alignment:
Q  27 aaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagaga 126  Q
    ||||| |||||| ||||||  ||| |||| || |||||||| || |||||  ||| |||| |||||||||||||||||| |||||||  ||||||| |||    
T  10166555 aaatatatttaggtgaatttcattgtttgaatgataatttggagaattttcaaaacgatg-aaatttatgaagtattttattcaagt-taaatttaaaga 10166652  T
Q  127 atttaaaat 135  Q
    |||| ||||    
T  10166653 atttcaaat 10166661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 110
Target Start/End: Complemental strand, 41481447 - 41481359
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    |||| |||||| ||||||| |||| |||| |||| |  |||||||  || | |||  |||||||| |||||||||||||||||||||||    
T  41481447 aattcaaatacttttagatcaattttattgtttgaaagataatttagaggaatttgaaaatgatgtaaatttatgaagtattttgttca 41481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 30524291 - 30524418
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| ||  ||||||||  ||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30524291 gtaatgttttgagggaattcaaatactttgggatgaatttcattgtttggataataatttgaaatatttttaaaatgatggaaatttatgaagtattttg 30524390  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  30524391 ttcaagt-taaatttagagaatttcaaat 30524418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 39342661 - 39342531
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  39342661 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 39342562  T
Q  111 agtaaaaatttagagaatttaaaataatacct 142  Q
    |||  ||||||||||||||| |||||| ||||    
T  39342561 agt-taaatttagagaatttcaaataacacct 39342531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 45984378 - 45984482
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||| ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  45984378 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 45984477  T
Q  109 caagt 113  Q
    |||||    
T  45984478 caagt 45984482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 45988738 - 45988842
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||| ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  45988738 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 45988837  T
Q  109 caagt 113  Q
    |||||    
T  45988838 caagt 45988842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 40495786 - 40495880
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  40495786 tgaattccattgtttggataataatttgaagcatttttaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 40495880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 13815015 - 13814890
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  ||||||| ||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  13815015 aatgttttgagggaattcaaatactttgatgtgaattccattatttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 13814916  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||| ||||||| ||||    
T  13814915 caagt-taaatttaaagaatttcaaat 13814890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 30587924 - 30587799
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  ||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  30587924 aatgttttgagggaattcaaatactttaatgtgaattccattgtttggataatagtttgaagtattttcaaaatgatggaaatttatgaagtattttgtt 30587825  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  30587824 caagt-caaatttagagaattttaaat 30587799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 40667379 - 40667504
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  |||||||||||||| ||  ||||||||  ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  40667379 aatgttttgagggaatttaaatactttgggatgaatttcattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtt 40667478  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||| ||||||| ||||    
T  40667479 caagt-taaatttaaagaatttcaaat 40667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 42816596 - 42816712
Alignment:
Q  18 cgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaa 117  Q
    ||||||||||||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||  ||    
T  42816596 cgggaatttaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatgaaaatttatgaagtattttgttcaagt-taa 42816694  T
Q  118 atttagagaatttaaaat 135  Q
    ||||||||||||| ||||    
T  42816695 atttagagaatttcaaat 42816712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 14603281 - 14603158
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | | ||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  14603281 tgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 14603182  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  14603181 agt-taaatttagagaatttcaaat 14603158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 40495278 - 40495393
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || |  ||||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  40495278 gggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 40495376  T
Q  119 tttagagaatttaaaat 135  Q
    |||| ||||||| ||||    
T  40495377 tttaaagaatttcaaat 40495393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 3905669 - 3905555
Alignment:
Q  20 ggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaat 119  Q
    |||||| |||||| || || ||||||||||| ||||||||||||||||||| |||||  |||||||| ||||||||||| ||||||||||||||  ||||    
T  3905669 ggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaattattttgttcaagt-taaat 3905571  T
Q  120 ttagagaatttaaaat 135  Q
    ||||||||||| ||||    
T  3905570 ttagagaatttcaaat 3905555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 146
Target Start/End: Complemental strand, 9784942 - 9784816
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | |||| || ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  9784942 gggaattcaaatactttggggtgaaatccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 9784844  T
Q  119 tttagagaatttaaaataataccttcaa 146  Q
    |||||||||||| |||| | ||||||||    
T  9784843 tttagagaatttcaaatgacaccttcaa 9784816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 23455258 - 23455148
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  23455258 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 23455160  T
Q  119 tttagagaattt 130  Q
    ||||||||||||    
T  23455159 tttagagaattt 23455148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 14790151 - 14790276
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || |||||| |||||||||||||||||||| ||| |||||| |||||||| |||||||| ||||||||||||    
T  14790151 aatgttttgagggaattcaaatactttgaggtgaattttattatttggataataatttaaagaatttttaaaatgatgaaaatttataaagtattttgtt 14790250  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||   |||||||||||||| ||||    
T  14790251 caagt-tgaatttagagaatttcaaat 14790276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 130
Target Start/End: Original strand, 32650611 - 32650731
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || |||||| |||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||    
T  32650611 aatgttttgagggaattcaaatactttgaggtgaattttattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttttt 32650710  T
Q  109 caagtaaaaatttagagaattt 130  Q
    |||||  ||||||||| |||||    
T  32650711 caagt-taaatttagataattt 32650731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 28539179 - 28539064
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| ||||  |||    
T  28539179 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtttaagt-taaa 28539081  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  28539080 tttagagaatttcaaat 28539064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 35455844 - 35455967
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | | ||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |    
T  35455844 tgttttaagggaattcaaatactttggggtaaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttga 35455943  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  35455944 agt-taaatttagagaattttaaat 35455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 30080822 - 30080697
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  || ||||||||||| || || ||||||| ||| ||||||| ||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  30080822 aatgttttgaggaaatttaaatactttcaggtgaattccattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtt 30080723  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
     ||||  ||||||||| ||||| ||||    
T  30080722 taagt-taaatttagaaaatttcaaat 30080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 36328786 - 36328717
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttc 109  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  36328786 tgaattctattatttggataataatttgaagaattttcaaaatgatggtaatttatgaagtattttgttc 36328717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 30629097 - 30629220
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| | |||||||||||| ||  | ||||||  ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||    
T  30629097 tgttttaagagaatttaaatactttggggtgaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttatgaagtatttttttca 30629196  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||| ||||| ||||    
T  30629197 agt-taaatttagaaaatttcaaat 30629220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 43791126 - 43791253
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || || |||| || ||| ||||||||||||||||||| |||||  ||||||||||||||||  |||||||| |    
T  43791126 gtaatgttttgagggaattcaaatactttgaggtgaactccattgtttggataataatttgaagaattttcaaaatgatggaaatttaataagtatttgg 43791225  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  43791226 ttcaagt-taaatttagagaatttcaaat 43791253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 23548601 - 23548507
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  23548601 tgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgttcaagt-taaatttagaaaatttcaaat 23548507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 26416034 - 26416116
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||  ||||||||||||||| ||||    
T  26416034 tttggataataatttgaagaattttcaaaatgatggaaatttaggaagtattttgttcaagt-caaatttagagaatttgaaat 26416116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 33310854 - 33310967
Alignment:
Q  21 gaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatt 120  Q
    ||||| |||| | ||||||| |||||  || |||||||| ||||||| ||  ||||  |||||||||||||||||||||||||||||||||||  |||||    
T  33310854 gaattcaaatccttttagattaattcctttgtttggatagtaatttgtagagttttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatt 33310952  T
Q  121 tagagaatttaaaat 135  Q
    |||||||||||||||    
T  33310953 tagagaatttaaaat 33310967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 25189247 - 25189127
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  ||||||  ||| ||||||| ||||||||||| |||||  |||||||||||||||| |||||||||||||    
T  25189247 aatgttttgagggaattcaaatactttgaagtgaatttcattgtttggatgataatttgaagaattttcaaaatgatggaaatttacgaagtattttgtt 25189148  T
Q  109 caagtaaaaatttagagaattt 130  Q
    |||||  |||||||||||||||    
T  25189147 caagt-taaatttagagaattt 25189127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 41443090 - 41443017
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    |||||| |||| ||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||||    
T  41443090 tgaattatattctttggataataatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagt 41443017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 22391610 - 22391484
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  | |||||||||||  || || ||||||  ||| ||||||||||||||| ||| |||||  ||||||||||||||| ||||||||||||    
T  22391610 gtaatgttttgagagaatttaaatattttgaggtgaatttcattgtttggataataatttaaagaatttta-aaatgatggaaatttctgaagtattttg 22391512  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  22391511 ttcaagt-taaatttagagaatttcaaat 22391484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 19865575 - 19865450
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  || |||| |||||| || || ||||||  ||| ||| ||||||||||| ||| |||||  ||||||||| ||||||||||||||||||||    
T  19865575 aatgttttgaggaaattcaaatactttgaggtgaatttcattgttttgataataatttaaagaattttcaaaatgatggtaatttatgaagtattttgtt 19865476  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  19865475 caagt-taaatttagagaatttcaaat 19865450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 45966996 - 45967105
Alignment:
Q  20 ggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaat 119  Q
    |||||||||||   ||||| |||||| |||| ||||||| |||||||  || |||||| |||||||| ||||||||||| ||||||||||||||  ||||    
T  45966996 ggaatttaaatgtttttaggtgaattttattgtttggatgataattttgagaatttttaaaatgatgaaaatttatgaaatattttgttcaagt-taaat 45967094  T
Q  120 ttagagaattt 130  Q
    ||| |||||||    
T  45967095 ttaaagaattt 45967105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 15990940 - 15991027
Alignment:
Q  20 ggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgt 107  Q
    |||||| |||||| || |||| ||||  ||| ||||||| |||||||  ||||||||  |||||||||||||||||||||||||||||    
T  15990940 ggaattcaaatactttgagataaattgcattgtttggatgataatttagagtattttcaaaatgatggaaatttatgaagtattttgt 15991027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 18926813 - 18926738
Alignment:
Q  38 gatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||  ||| ||||||| ||||||||||  | |||  |||||||||||||||||||||||||||||||||||    
T  18926813 gatgaatttcattgtttggatgataatttgaaaaaatttcaaaatgatggaaatttatgaagtattttgttcaagt 18926738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 18789257 - 18789189
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatgg 87  Q
    ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  |||||||||    
T  18789257 gggaattcaaatactttaaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgg 18789189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 18789565 - 18789633
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatgg 87  Q
    ||||||| |||||| || || ||||||| ||| ||| ||||||||||||||| |||||| |||||||||    
T  18789565 gggaattcaaatactttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgg 18789633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 37460897 - 37460829
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||||| ||||||||||| |||||| | ||||| |||| ||  |||||||| ||||||||||||    
T  37460897 tgaattctattgtttggataatattttgaaatttttttaaaataatataaatttataaagtattttgtt 37460829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 23695995 - 23696069
Alignment:
Q  60 ataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||| || |||||| ||| |||| |||||||| |||||||||||||||||  ||||||||| ||||| ||||    
T  23695995 ataatttggagaatttttaaaacgatgaaaatttataaagtattttgttcaagt-taaatttagaaaatttcaaat 23696069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 18938963 - 18938915
Alignment:
Q  79 aaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaat 128  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  18938963 aaatgatagaaatttatgaagtattttgttcaaat-taaatttagagaat 18938915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 108
Target Start/End: Complemental strand, 5976533 - 5976497
Alignment:
Q  72 atttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  5976533 atttttaaaatgatagaaatttatgaagtattttgtt 5976497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 41762245 - 41762115
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  41762245 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 41762146  T
Q  111 agtaaaaatttagagaatttaaaataatacct 142  Q
    |||  ||||||||||||||| |||||| ||||    
T  41762145 agt-taaatttagagaatttcaaataacacct 41762115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 31316209 - 31316324
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| ||| || || |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||| ||||  |||    
T  31316209 gggaattcaaacactttgagatgaattctattatttggatgataatttgaagaattttttaaatgatggaaatttatgaagcattttgtttaagt-taaa 31316307  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  31316308 tttagagaatttcaaat 31316324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 33146211 - 33146336
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  33146211 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 33146310  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  33146311 caagt-taaatttagagaatttcaaat 33146336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 32250133 - 32250005
Alignment:
Q  6 agtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtatttt 105  Q
    |||||||||||  ||||||| |||||| || |||||||||| ||| ||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||    
T  32250133 agtaatgttttgagggaattcaaataccttgagatgaattccattgtttggataataatttaaagaatttttaaaatgatggtaatttatgaagtatttt 32250034  T
Q  106 gttcaagtaaaaatttagagaatttaaaat 135  Q
     |||||||  ||||||| ||||||| ||||    
T  32250033 attcaagt-taaatttaaagaattttaaat 32250005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 17542393 - 17542268
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| |||| |||||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  17542393 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttaaagaatttttaaaatgatggaaatttatgaagtattttgtt 17542294  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||   |||||||||||||| ||||    
T  17542293 caagt-tgaatttagagaatttcaaat 17542268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 37241142 - 37241047
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattt 104  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  37241142 aatgttttcagggaattgaaatactttgaggtgaattccattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattt 37241047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 9894344 - 9894250
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||    
T  9894344 gggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagt 9894250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 135
Target Start/End: Original strand, 28489513 - 28489626
Alignment:
Q  21 gaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatt 120  Q
    ||||| |||||| || || ||||||| ||| ||| ||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||  |||||    
T  28489513 gaattcaaatactttgaggtgaattccattgtttcgataataatttaaagaatttttaaaatgatggaaatttatgaagtagtttgttcaagt-taaatt 28489611  T
Q  121 tagagaatttaaaat 135  Q
    |||||||||| ||||    
T  28489612 tagagaatttcaaat 28489626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 10314685 - 10314812
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||| ||||| ||||||| |||||  || |  ||||||||||| ||||||||||||||||||| |||||  |||||||| |||||||||||||||||||    
T  10314685 gtaatattttaagggaattcaaatattttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattttg 10314784  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    || ||||  ||||||| ||||||| ||||    
T  10314785 tttaagt-taaatttaaagaatttcaaat 10314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 14834860 - 14834982
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| ||||||  |||||| || || ||||||  ||| ||||||||||||||||||| |||||  |||||||| ||||||||||||||||||     
T  14834860 gtaatgttttaagggaatccaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatgaaaatttatgaagtattttt 14834959  T
Q  107 ttcaagtaaaaatttagagaattt 130  Q
    ||||||   |||||||||||||||    
T  14834960 ttcaag-ctaaatttagagaattt 14834982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 15270886 - 15270761
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| |||| ||||||||||| || || ||  ||||||||||||||||||||||||||| ||    
T  15270886 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaataataatttgtagaatattcaaaatgatggaaatttatgaagtattttatt 15270787  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  15270786 caagt-taaatttagagaatttcaaat 15270761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 12479958 - 12480070
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaattt 121  Q
    |||| |||||| || || ||||||  ||| ||| ||||||||||||||| |||||  |||||||||||||| ||||||||||||||||||| | ||||||    
T  12479958 aattcaaatactttgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttgttcaag-acaaattt 12480056  T
Q  122 agagaatttaaaat 135  Q
    ||||||||| ||||    
T  12480057 agagaatttgaaat 12480070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 34105122 - 34105234
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaattt 121  Q
    |||| |||||| || |||||||||  ||| ||||||||||||||||||| |||||  ||||||| |||||||| ||||||||||||| ||||  ||||||    
T  34105122 aattcaaatactttgagatgaatttcattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtattttgtttaagt-taaattt 34105220  T
Q  122 agagaatttaaaat 135  Q
    ||||||||| ||||    
T  34105221 agagaatttcaaat 34105234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 927350 - 927464
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||  |||    
T  927350 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaat-atggaaatttatgaagtattttgttcaagt-taaa 927447  T
Q  119 tttagagaatttaaaat 135  Q
    ||||||| |||| ||||    
T  927448 tttagaggatttcaaat 927464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 22303904 - 22303777
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||  ||| ||||| ||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  22303904 gtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 22303805  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  22303804 ttcaagt-taaatgtagagaatttcaaat 22303777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 8264581 - 8264671
Alignment:
Q  44 ttctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||| ||||   ||||||||||||||||||||||||||| |||||||  ||||||||||||||| ||||    
T  8264581 ttctattgtttagataataatttgaagaatttccaaaatgatggaaatttatgaagtattttattcaagt-taaatttagagaattttaaat 8264671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 37241587 - 37241510
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  37241587 tttggataatattttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttaaagaattt 37241510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 30519084 - 30519145
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||    
T  30519084 tttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagt 30519145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 30559424 - 30559485
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||||    
T  30559424 tttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaagt 30559485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 22305132 - 22305236
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| || ||| || || ||||||| ||| |||||||||||||||| || |||||  |||||| |||||||||||||||||||| ||    
T  22305132 aatgttttgagggaattcaactactttgaggtgaattccattgtttggataataatttgtagaattttcaaaatgaaggaaatttatgaagtattttatt 22305231  T
Q  109 caagt 113  Q
    |||||    
T  22305232 caagt 22305236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 35379379 - 35379505
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||| | || |  |||||| ||||  |||||| ||||||||||| |||||  ||||| ||||||||||||||||||||||    
T  35379379 gtaatgttttgagggaattcaaattctttgaagtgaattttattgattggatgataatttgaag-attttcaaaatggtggaaatttatgaagtattttg 35379477  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  35379478 ttcaagt-taaatttagagaatttcaaat 35379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 40089799 - 40089724
Alignment:
Q  59 aataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||| ||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  40089799 aataatttaaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 40089724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 35111299 - 35111389
Alignment:
Q  44 ttctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||||||||||||||||||| | |||  |||||||| ||||||||||||||||||||| ||||  ||||||| ||||||| ||||    
T  35111299 ttctattgtttggataataatttgaagaactttcaaaatgatgaaaatttatgaagtattttgtttaagt-taaatttaaagaatttcaaat 35111389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 6772233 - 6772120
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||||||||||  | || ||||||  ||| ||||||| ||||||||||  ||| |  ||| |||||||||||||||||||||||||||||||  |||    
T  6772233 gggaatttaaatac--tgaggtgaatttcattgtttggatgataatttgaataattatcaaaacgatggaaatttatgaagtattttgttcaagt-taaa 6772137  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  6772136 tttagagaatttcaaat 6772120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 17493184 - 17493072
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaattt 121  Q
    |||| ||||| || ||||||||||| ||| ||||||| |||||||| || |||||  ||||||||||||||||| ||||||||| || ||||  ||||||    
T  17493184 aattcaaatatatctagatgaattccattgtttggatgataatttggagaattttcaaaatgatggaaatttataaagtatttttttaaagt-taaattt 17493086  T
Q  122 agagaatttaaaat 135  Q
    | ||||||| ||||    
T  17493085 aaagaatttcaaat 17493072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 31367936 - 31368052
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttga-agtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaa 117  Q
    ||||||| ||| || || |||||||||||||| ||||||| |||||||||   | ||||| |||||||||||||| |||||| |||||||| ||||  ||    
T  31367936 gggaattcaaacactttgagatgaattctattgtttggatgataatttgatttttttttttaaatgatggaaattaatgaagcattttgtttaagt-taa 31368034  T
Q  118 atttagagaatttaaaat 135  Q
    ||||||||||||| ||||    
T  31368035 atttagagaatttcaaat 31368052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 22302592 - 22302656
Alignment:
Q  41 gaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtatttt 105  Q
    |||||| ||| |||||||||||||||||||  ||||  |||||||||||||||||||||||||||    
T  22302592 gaattccattgtttggataataatttgaagatttttcaaaatgatggaaatttatgaagtatttt 22302656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 22766989 - 22767081
Alignment:
Q  8 taatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagt 100  Q
    |||||||||  ||||||| |||||| || || ||||||||||| ||||||||||||||| ||| |||||   ||||||||||||||| |||||    
T  22766989 taatgttttgagggaattcaaatactttaaggtgaattctattgtttggataataatttaaagaattttcagaatgatggaaatttacgaagt 22767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 17444451 - 17444364
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaa-tgatggaaatttatgaagtattttgt 107  Q
    |||||||||||||  ||||| | ||||||||| |||||||||| ||||  || |||||| ||| ||||||||||||||||||||||||||    
T  17444451 gggaatttaaata--tttaggtaaattctattgtttggataatgatttagagaatttttcaaaatgatggaaatttatgaagtattttgt 17444364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 11601108 - 11601199
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaa 133  Q
    |||||| |||||||||||| ||||||||||| |||||  ||||  ||| ||||| |||||||||||||||||||  ||||||||| ||||||||    
T  11601108 tgaattttattatttggatgataatttgaagaattttcaaaattgtgg-aatttctgaagtattttgttcaagt-taaatttagacaatttaaa 11601199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 17492679 - 17492582
Alignment:
Q  10 atgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgt 107  Q
    |||||||  ||||||| |||||  || || ||||||| ||| ||||||| ||||||||||| |||||  |||||||| ||||||| ||||||||||||    
T  17492679 atgttttgagggaattcaaataatttgaggtgaattccattgtttggatgataatttgaagaattttcaaaatgatgaaaatttaagaagtattttgt 17492582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 28490031 - 28490115
Alignment:
Q  10 atgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaattta 94  Q
    |||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||||| | |||||  ||||||||||||||||    
T  28490031 atgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaggaattttcaaaatgatggaaattta 28490115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 11409258 - 11409344
Alignment:
Q  48 attatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||| ||||||| || |||||| ||||||||||||||| ||||||||||||| |||||  ||||||| ||||||| ||||    
T  11409258 attatttaaatagtaatttggagaatttttaaaatgatggaaatttgtgaagtattttgtccaagt-taaatttaaagaatttcaaat 11409344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 12991332 - 12991276
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatg 96  Q
    ||||||||||| |||||||||||||||||| | ||||| |||| ||| |||||||||    
T  12991332 tgaattctattgtttggataataatttgaaatttttttaaaataatgaaaatttatg 12991276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 13064955 - 13064899
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatg 96  Q
    ||||||||||| |||||||||||||||||| | ||||| |||| ||| |||||||||    
T  13064955 tgaattctattgtttggataataatttgaaatttttttaaaataatgaaaatttatg 13064899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 9894114 - 9894080
Alignment:
Q  79 aaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||| |||||||||||||||||||||||||    
T  9894114 aaatgatgggaatttatgaagtattttgttcaagt 9894080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 8475199 - 8475324
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| ||| | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||    
T  8475199 aatgttttgagggaattcaaatacttttgggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgtt 8475298  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  8475299 caagt-taaatttagagaatttcaaat 8475324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 15616386 - 15616271
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    |||||||||||||  || || ||||||||||| ||||||||||||||| ||| |||||| |||||||| ||||||||||||||||||||||||||  |||    
T  15616386 gggaatttaaatattttgaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgcaaatttatgaagtattttgttcaagt-taaa 15616288  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  15616287 tttagagaattttaaat 15616271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 31412940 - 31413064
Alignment:
Q  10 atgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttc 109  Q
    |||||||  ||||||| |||||| || | |||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||| ||||    
T  31412940 atgttttgagggaattcaaatactttgatatgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtatttagttc 31413039  T
Q  110 aagtaaaaatttagagaatttaaaat 135  Q
    ||||  ||||||| ||||||| ||||    
T  31413040 aagt-taaatttaaagaatttcaaat 31413064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 1195371 - 1195496
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  |||| || |||||| || || ||||||| ||| ||| ||||||||||||||| |||||  |||| |||||||||||||||||||||||||    
T  1195371 aatgttttgagggatttcaaatactttgaggtgaattccattgtttagataataatttgaagaattttcaaaattatggaaatttatgaagtattttgtt 1195470  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  1195471 caagt-caaatttagagaatttcaaat 1195496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 10105120 - 10105197
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||  |||||||||||||||    
T  10105120 tttggataataatttgaagcatttttaaaatgatggaaatgtatgaagtattttattcaagt-taaatttagagaattt 10105197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 1368513 - 1368639
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||| ||||| ||||||| ||||   || || ||||||||||| ||||||||||||| ||||| |||||  |||||||||||||||||||| || ||||    
T  1368513 gtaatattttaagggaattcaaatgttttgaggtgaattctattgtttggataataatatgaaggattttcaaaatgatggaaatttatgaaata-tttg 1368611  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  1368612 ttcaagt-taaatttagagaatttcaaat 1368639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 28918201 - 28918327
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| || |||| |||||| || || ||||||  ||| ||||||||||||||||||| |||||  |||||||||||||||||||| || ||||    
T  28918201 gtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttggataataatttgaaggattttcaaaatgatggaaatttatgaaata-tttg 28918299  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||| ||||||||| ||||    
T  28918300 ttcaagt-taaattcagagaatttcaaat 28918327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 9697531 - 9697625
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||| ||||| | |||||  |||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  9697531 tgaattccattgtttggataatagtttgatgaattttcaaaatgatgaaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 9697625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 6358288 - 6358161
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  | |||||||||||| ||  | ||||||||||| || | |||||||||||||| |||||  |||| |||||||||||| ||| ||||||    
T  6358288 gtaatgttttgagagaatttaaatactttgtggtgaattctattgttagaataataatttgaagaattttcaaaataatggaaatttattaagcattttg 6358189  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    | |||||  ||||||||||| ||| ||||    
T  6358188 tccaagt-taaatttagagagtttcaaat 6358161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 26901789 - 26901695
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||| |||||  ||||| ||||||  ||| || |||  |||||||  || |||||| ||||||| |||||||||||||||||||||||||||    
T  26901789 gggaattcaaataattttaggtgaatttcattgttcggaggataattttgagaatttttaaaatgatagaaatttatgaagtattttgttcaagt 26901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 15832502 - 15832571
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttt 76  Q
    ||||||||||| ||||||| |||||| ||  | ||||||  ||| |||||||| ||||||||||||||||    
T  15832502 gtaatgttttaagggaattcaaatactttggggtgaatttcattgtttggatactaatttgaagtatttt 15832571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 4111 - 4237
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || || ||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  4111 gtaatgttttgagggaattcaaatactttgaggtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttg 4210  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    || |||| |||| ||||||||||| ||||    
T  4211 tt-aagttaaaa-ttagagaatttcaaat 4237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 221233 - 221106
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| ||||||| |||||  ||  | ||||||  ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  221233 gtaatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttg 221134  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  221133 ttcaagt-taaatttagagaatttcaaat 221106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 223745 - 223659
Alignment:
Q  48 attatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  223745 attatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 223659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 29257394 - 29257271
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  29257394 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttca 29257295  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  29257294 agt-taaatttagagaatttcaaat 29257271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 31980530 - 31980403
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| ||||||| |||||  ||  | ||||||  ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  31980530 gtaatgttttaagggaattcaaatattttggggtgaatttcattatttggataataatttgatgtattttcaaaatgatggaaatttatgaagtattttg 31980431  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  31980430 ttcaagt-taaatttagagaatttcaaat 31980403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 26520484 - 26520359
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||    
T  26520484 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttatt 26520385  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  26520384 caagt-caaatttagagaatttgaaat 26520359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 34008819 - 34008944
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  34008819 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaagaattttcaaaatgatggaaatttatgaagtattttgtt 34008918  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  34008919 caagt-taaatttagagaatttcaaat 34008944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 14274 - 14401
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| ||||||| |||||| ||  | ||||||  ||| ||| |||||||||||||||||||||  |||||||||||||||||||||||| |||    
T  14274 gtaatgttttaagggaattcaaatactttggggtgaatttcattgtttagataataatttgaagtattttcaaaatgatggaaatttatgaagtatcttg 14373  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  14374 ttcaagt-taaatttagagaatttcaaat 14401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 29482842 - 29482727
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  29482842 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 29482744  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  29482743 tttagagaatttcaaat 29482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 44346721 - 44346598
Alignment:
Q  11 tgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||||| ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |    
T  44346721 tgttttaagggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttga 44346622  T
Q  111 agtaaaaatttagagaatttaaaat 135  Q
    |||  ||||||||||||||| ||||    
T  44346621 agt-taaatttagagaatttcaaat 44346598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 40734117 - 40734021
Alignment:
Q  38 gatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||| ||| ||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  40734117 gatgaattccattgttttgataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 40734021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 9982672 - 9982799
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  | |||||||||||  || || ||||||| ||| ||| ||||||||||||||| |||||| |||||||| |||||||||||||||||||    
T  9982672 gtaatgttttgagagaatttaaatattttgaggtgaattccattgtttagataataatttgaagaatttttaaaatgatgaaaatttatgaagtattttg 9982771  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||| ||||||| ||||    
T  9982772 ttcaagt-taaatttaaagaatttcaaat 9982799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 33377332 - 33377217
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||  |||    
T  33377332 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttacgaagtattttgttcaagt-taaa 33377234  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  33377233 tttagagaatttcaaat 33377217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 1088289 - 1088196
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||| ||| ||||||||||||||| ||| |||||  ||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  1088289 aattccattgtttggataataatttcaagcattttcaaaatgatagaaatttatgaagtattttgttcaagtttaaatttagagaatttcaaat 1088196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 13144631 - 13144746
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || || ||||||| ||| ||||||||||||||||||| |||||  ||||||||  |||||||||||||||||||||||||   ||    
T  13144631 gggaattcaaatactttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattttgttcaagt-tcaa 13144729  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  13144730 tttagagaatttcaaat 13144746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 24044996 - 24045123
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||| ||| ||||| ||||| ||||||| |||||  ||||||||||||||||||||||||||||    
T  24044996 gtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttgggtaatagtttgaagaattttcaaaatgatggaaatttatgaagtattttg 24045095  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  |||| |||||||||| ||||    
T  24045096 ttcaagt-taaatgtagagaatttcaaat 24045123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 8049291 - 8049409
Alignment:
Q  8 taatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgt 107  Q
    |||||||||  ||||||| |||||| || || | ||||  ||| ||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||    
T  8049291 taatgttttgagggaattcaaatactttgaggtaaatttcattgtttggataataatttgaagaattttcaaaatgattgaaatttatgaagtattttgt 8049390  T
Q  108 tcaagtaaaaatttagagaa 127  Q
    ||||||  ||||||||||||    
T  8049391 tcaagt-taaatttagagaa 8049409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 31976599 - 31976507
Alignment:
Q  37 agatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    |||||||||  ||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||| |  |||||||||||||||    
T  31976599 agatgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttattcaaat-taaatttagagaattt 31976507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 34388576 - 34388649
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||| ||| ||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||||    
T  34388576 tgaattccattgtttggataataatttaaagaacttttaaaatgatggaaatttatgaagtattttgttcaagt 34388649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 33986040 - 33986167
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  | ||||| |||||| || || ||||||  ||| ||| ||||||||||||||| |||||  |||||||||||||| |||||||||||||    
T  33986040 gtaatgttttgagagaattcaaatactttgaggtgaatttcattgtttagataataatttgaagaattttcaaaatgatggaaattcatgaagtattttg 33986139  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
     ||||||  ||||||||||||||| ||||    
T  33986140 gtcaagt-caaatttagagaatttgaaat 33986167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 6416253 - 6416324
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaa 111  Q
    ||||||| ||| ||| ||||||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  6416253 tgaattccattgttttgataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 6416324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 28324709 - 28324603
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||   |||||| |||||| || || ||||||  ||| ||||||||||| ||||||| |||||  ||||||||||||||||||| ||||||||    
T  28324709 gtaatgttttgaaggaattcaaataccttgagctgaattacattgtttggataatagtttgaagaattttcaaaatgatggaaatttatgaggtattttg 28324610  T
Q  107 ttcaagt 113  Q
    |||||||    
T  28324609 ttcaagt 28324603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 24510279 - 24510218
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||    
T  24510279 tttgaataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttaaagt 24510218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 35979039 - 35978948
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||| |||||| || || ||||||| ||| |||||||||||||||||| |   ||| ||||||||| |||||||||||||||||||||||||    
T  35979039 gggaattcaaatactttgaggtgaattccattgtttggataataatttgaaat---tttaaaatgatgggaatttatgaagtattttgttcaagt 35978948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 36625223 - 36625145
Alignment:
Q  56 gataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||  ||||||| ||||||| ||||    
T  36625223 gataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgatcaagt-taaatttaaagaatttcaaat 36625145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 10593152 - 10593241
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaataatacct 142  Q
    ||||||||||||||||||| |||||  |||||||  || |||||||| ||||||||||||||  ||||||||||||||| |||||| ||||    
T  10593152 tttggataataatttgaagaattttcaaaatgattaaactttatgaaatattttgttcaagt-taaatttagagaatttcaaataacacct 10593241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 15186831 - 15186737
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||| ||||| | ||||||  ||| |||||  || ||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||    
T  15186831 tgaattctattgtttgggtgataattaaaagaattttcaaattgatggaaatttatgaagtattttgttcaagt-taaatttagagatttttaaat 15186737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 35404774 - 35404683
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    |||| |||||| || || |||||| || | ||||||||||||||  |||  ||||| ||||||| |||||||||||||||||||||||||||    
T  35404774 aattcaaatactttgaggtgaattttactgtttggataataattccaagagtttttaaaatgatagaaatttatgaagtattttgttcaagt 35404683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 7079411 - 7079500
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaataatacct 142  Q
    ||||||||||||||| ||| |||||  ||| |||| ||||||| |||||||||| |||||||  ||||||||||||||| |||| ||||||    
T  7079411 tttggataataatttaaagaattttcaaaacgatgaaaatttaagaagtattttattcaagt-taaatttagagaatttcaaatgatacct 7079500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 44889391 - 44889489
Alignment:
Q  8 taatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    |||||||||  ||||||| |||||| || |  ||||||| ||| |||||||||||||||| || |||||   ||||||| |||||||||||||||||||    
T  44889391 taatgttttgagggaattcaaatactttgatgtgaattccattgtttggataataatttgtagaattttcataatgatgaaaatttatgaagtattttg 44889489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 43167724 - 43167667
Alignment:
Q  56 gataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||||||||| |||||  ||||| || ||||||||||||||||||||| ||||    
T  43167724 gataataatttgaagaattttcaaaatgttgaaaatttatgaagtattttgtttaagt 43167667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 6460878 - 6460827
Alignment:
Q  62 aatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    ||||||||| | |||  |||||||||||||||||||| ||||||||||||||    
T  6460878 aatttgaagaaatttcaaaatgatggaaatttatgaattattttgttcaagt 6460827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 29611408 - 29611485
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatg 86  Q
    ||||||||  ||||||| |||||| || || ||||||  ||| ||||||||||||||||||| |||||  ||||||||    
T  29611408 aatgttttgagggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaatgatg 29611485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 2e-28; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 29091173 - 29091300
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| || |  ||||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  29091173 gtaatgttttgagggaattcaaatactttgatgtgaattctattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttg 29091272  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||| ||||||| ||||    
T  29091273 ttcaagt-taaatttaaagaatttcaaat 29091300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 53760794 - 53760700
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  53760794 tgaattctattgtttggataataatttgaagaatttttaaaatgatggaaatttatgaagtattttgttcaagt-taaatttaaagaatttcaaat 53760700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 2125905 - 2126020
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  2125905 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 2126003  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  2126004 tttagagaatttcaaat 2126020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 35470170 - 35470285
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| ||  | ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  |||    
T  35470170 gggaattcaaatactttggggtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaa 35470268  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  35470269 tttagagaatttcaaat 35470285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 41139509 - 41139636
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  || |||| |||||| ||||| ||||||||||| ||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||    
T  41139509 gtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttggataataatttaaagaatttttaaaatgatgaaaatttatgaagtattttg 41139608  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    || |||   ||||||||||||||| ||||    
T  41139609 tttaag-ctaaatttagagaatttcaaat 41139636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 10354411 - 10354505
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||| |||||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||| | |||| |||||||||| ||||    
T  10354411 tgaattctcttatttggataataatttgaagaattttcaaaatgatgggaatttatgaagtattttgttcaag-acaaatatagagaatttcaaat 10354505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 46242561 - 46242443
Alignment:
Q  27 aaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagaga 126  Q
    |||||| || || ||||||| ||| |||||| |||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||| |||    
T  46242561 aaatactttgaggtgaattccattgtttggagaataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttataga 46242463  T
Q  127 atttaaaataataccttcaa 146  Q
    |||| |||| | ||||||||    
T  46242462 atttcaaatgacaccttcaa 46242443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 27284697 - 27284572
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||| | ||||| |||||| || || ||||||  ||| |||| ||||| |||||||  |||||| ||||||||||||||||||||||||||||||    
T  27284697 aatgttttaagagaattcaaatactttgaggtgaatttcattgtttgtataatgatttgaataatttttaaaatgatggaaatttatgaagtattttgtt 27284598  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||||||||| ||||    
T  27284597 caagt-taaatttagagaatttcaaat 27284572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 56339171 - 56339303
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || |  ||||||  ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||     
T  56339171 aatgttttgagggaattcaaatactttgatgtgaatttcattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaagtattttgtc 56339270  T
Q  109 caagtaaaaatttagagaatttaaaataatacct 142  Q
    |||||  ||||||| ||||||| |||||| ||||    
T  56339271 caagt-taaatttaaagaatttcaaataacacct 56339303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 4490096 - 4490190
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||| |||| ||||||||||||||| ||| |||||  ||||||||||||||||||| |||||||||||||||  ||||||||||||||| ||||    
T  4490096 tgaattttattgtttggataataatttaaagaattttcaaaatgatggaaatttatgatgtattttgttcaagt-taaatttagagaatttcaaat 4490190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 13318663 - 13318569
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||| |||| ||||||||||||||||||| |||||  ||||||| |||| ||||||||||||||||||||||  ||||||||||||||| ||||    
T  13318663 tgaattttattgtttggataataatttgaagaattttcaaaatgatagaaacttatgaagtattttgttcaagt-taaatttagagaatttcaaat 13318569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 40548222 - 40548128
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||| ||| ||||||||||||||  ||||||||||||||| ||||    
T  40548222 tgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttaggaaatattttgttcaagt-taaatttagagaatttcaaat 40548128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 42776247 - 42776153
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  ||||||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  42776247 tgaattccattgtttggataataatttgaagcattttcaaaatgatagaaatttatgaagtattttgtttaagt-taaatttagagaatttcaaat 42776153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 17727103 - 17727228
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  ||||||| |||||| || || ||||||  ||| ||||||||||||||||||| |||||  |||| ||||||||||| |||||||||||||    
T  17727103 aatgttttgtgggaattcaaatactttgaggtgaatttcattgtttggataataatttgaagaattttcaaaattatggaaatttacgaagtattttgtt 17727202  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
     ||||  ||||||||||||||| ||||    
T  17727203 aaagt-taaatttagagaatttcaaat 17727228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 42776688 - 42776777
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaa 111  Q
    |||| |||||| ||||| ||||||  ||| ||||||| ||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  42776688 aattcaaatacttttaggtgaatttcattgtttggatgataatttgaagaattttcaaaatgatggaaatttatgaagtattttgttcaa 42776777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 42 - 135
Target Start/End: Complemental strand, 46243099 - 46243007
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||| ||| ||||||||||||||| ||| |||||  |||||||||||||||| |||||||||| |||||||  ||||||||||||||||||||    
T  46243099 aattccattgtttggataataatttaaagaattttcaaaatgatggaaatttaagaagtattttattcaagt-taaatttagagaatttaaaat 46243007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 16516207 - 16516335
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggat-aataatttgaagtatttttgaaatgatggaaatttatgaagtatttt 105  Q
    ||||||||||   ||||||||||||| || |  |||| || ||| ||||||| || ||||||||| |||||  |||||||| ||||||||||||||||||    
T  16516207 gtaatgttttgaaggaatttaaatactttgatgtgaactccattgtttggattaagaatttgaagaattttcaaaatgatgaaaatttatgaagtatttt 16516306  T
Q  106 gttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||  ||||||||||||||| ||||    
T  16516307 gttcaagt-taaatttagagaatttcaaat 16516335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 26534529 - 26534656
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||| ||    ||||||||||| ||||||||||||||| ||| |||||  ||||||| |||||| |||||||||||||    
T  26534529 gtaatgttttgagggaattcaaatactttgttgtgaattctattgtttggataataatttcaagaattttcaaaatgatagaaattcatgaagtattttg 26534628  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    || ||||  ||||||||| ||||| ||||    
T  26534629 tttaagt-caaatttagaaaatttgaaat 26534656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 54566251 - 54566338
Alignment:
Q  47 tattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||| |||| ||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  54566251 tattgtttgaataataatttgaaatttttttaaaatgatcgaaatttatgaagtattttgttcaagt-taaatttaaagaatttcaaat 54566338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 24705432 - 24705514
Alignment:
Q  52 tttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||| |||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||||  ||||||| ||||||| ||||    
T  24705432 tttgaataataatttgaagaatttttaaaatgatagaaatttatgaaatattttgttcaagt-taaatttaaagaatttcaaat 24705514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 40338276 - 40338162
Alignment:
Q  20 ggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaat 119  Q
    |||||| |||||| || || ||||||  ||| |||||||||||||||  || |||||  ||||||||||||||||||||||||||| |||||||  ||||    
T  40338276 ggaattcaaatactttgaggtgaatttcattgtttggataataatttacagaattttcaaaatgatggaaatttatgaagtattttattcaagt-taaat 40338178  T
Q  120 ttagagaatttaaaat 135  Q
    ||||| ||||| ||||    
T  40338177 ttagaaaatttcaaat 40338162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 42775643 - 42775771
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagta---tttt 105  Q
    ||||||||  ||||||| |||||| || || ||||||| ||| ||||||||||||||| ||  |||||  |||| ||||||||||||||||||   ||||    
T  42775643 aatgttttgagggaattcaaatactttgaggtgaattccattgtttggataataatttaaataattttcaaaataatggaaatttatgaagtattttttt 42775742  T
Q  106 gttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||||  ||||||||||||||| ||||    
T  42775743 gttcaagt-taaatttagagaatttcaaat 42775771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 29686086 - 29686010
Alignment:
Q  34 tttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttca 110  Q
    ||||| ||||||||||| ||| ||| |||||||||| | ||||  ||||||||||||||||| ||||||||||||||    
T  29686086 tttagttgaattctattgtttagatgataatttgaatttttttcaaaatgatggaaatttataaagtattttgttca 29686010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 52295070 - 52294955
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||  || ||| |||||  ||| ||||||||||||||||||| |||||  ||||||||  ||||||||||||||| |||||||||  |||    
T  52295070 gggaattcaaatattttgagacgaatttcattgtttggataataatttgaagaattttcaaaatgatgagaatttatgaagtattgtgttcaagt-taaa 52294972  T
Q  119 tttagagaatttaaaat 135  Q
    | |||||||||| ||||    
T  52294971 tgtagagaatttcaaat 52294955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 47108365 - 47108443
Alignment:
Q  56 gataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||| ||||||||| |||||| ||| |||| ||||||||||||||||||||||||||  ||||||| ||||||| ||||    
T  47108365 gataacaatttgaagaatttttaaaacgatgaaaatttatgaagtattttgttcaagt-taaatttaaagaatttcaaat 47108443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 31947660 - 31947725
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtatttt 105  Q
    ||||||| ||| ||||||||||||||||||| |||||  ||||||| |||||||| ||||||||||    
T  31947660 tgaattccattgtttggataataatttgaagaattttcaaaatgatagaaatttacgaagtatttt 31947725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 103
Target Start/End: Complemental strand, 19461738 - 19461677
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtatt 103  Q
    ||||||||| ||||||||||||| || || ||||||  ||||||||||||||||||| ||||    
T  19461738 aattctattgtttggataataatatggagaatttttagaatgatggaaatttatgaattatt 19461677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 13088690 - 13088635
Alignment:
Q  79 aaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||| |||||||||||||||||||||||| |  ||||||||||||||| ||||    
T  13088690 aaatgatgaaaatttatgaagtattttgttcaaat-taaatttagagaatttcaaat 13088635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 30303772 - 30303891
Alignment:
Q  22 aatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaattt 121  Q
    ||||||||| | ||||||| |||| || | ||||||| ||  ||||||| |||||  |||| ||| |||||||||||||||||| | ||| |  ||||||    
T  30303772 aatttaaatccttttagataaattttagtgtttggatgattttttgaagaattttcaaaataatgaaaatttatgaagtattttatccaact-taaattt 30303870  T
Q  122 agagaatttaaaataatacct 142  Q
    ||||||||| |||||| ||||    
T  30303871 agagaatttcaaataacacct 30303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 52493972 - 52494086
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||  ||||| ||||||   || ||||||| |||||||  || |||||| ||| |||||||||| |||||||||||| |||||||  |||    
T  52493972 gggaattaaaatatttttaggtgaatttcgttgtttggatgataattttgagaatttttaaaaggatggaaatt-atgaagtattttcttcaagt-taaa 52494069  T
Q  119 tttagagaatttaaaat 135  Q
    |||||||||||| ||||    
T  52494070 tttagagaatttcaaat 52494086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 17727014 - 17727068
Alignment:
Q  57 ataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaa 111  Q
    |||||||| | ||| |||||| |||||||| ||||||||||| ||||||||||||    
T  17727014 ataataatataaagaatttttaaaatgatgaaaatttatgaaatattttgttcaa 17727068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 16300189 - 16300133
Alignment:
Q  73 tttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||| |||||||| |||||||||||||||||||| |||||  |||| ||||||||||    
T  16300189 tttttcaaatgatgaaaatttatgaagtattttgtacaagt-taaatatagagaattt 16300133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 24062835 - 24062934
Alignment:
Q  35 ttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaa 134  Q
    ||||||||||||  ||  |||||| |||||||  || |||||  ||||||||||||||| |||||||||| || ||| |  ||||||||||||||| |||    
T  24062835 ttagatgaattcctttgattggatgataattttgagaattttcaaaatgatggaaatttgtgaagtatttagtccaa-tttaaatttagagaatttcaaa 24062933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 4502 - 4408
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  4502 tgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 4408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 5146 - 5052
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  5146 tgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttatgaagtattttgttcaagt-taaatttagagaatttcaaat 5052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 2903 - 3029
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||  ||||||| |||||  || || ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||||||| |||||||    
T  2903 gtaatgttttgagggaattcaaatat-ttgaggtgaattccattgtttggataataatttgaagaattttcaaaatgatggaaatttatgaaatattttg 3001  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||||||||| ||||    
T  3002 ttcaagt-caaatttagagaatttgaaat 3029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 135
Target Start/End: Complemental strand, 19822 - 19695
Alignment:
Q  7 gtaatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttg 106  Q
    ||||||||||| |  |||| |||||| || || ||||||  ||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  19822 gtaatgttttaagaaaattcaaatactttgaggtgaattacattatttagataataatttgaagaattttcaaaatgatggaaatttatgaagtattttg 19723  T
Q  107 ttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||  ||||||||| ||||| ||||    
T  19722 ttcaagt-taaatttagataatttcaaat 19695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Original strand, 19266 - 19324
Alignment:
Q  40 tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaa 98  Q
    ||||||| ||| ||| ||||||||||||||| |||||  ||||||||||||||||||||    
T  19266 tgaattccattgtttcgataataatttgaagaattttaaaaatgatggaaatttatgaa 19324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 7191 - 7314
Alignment:
Q  11 tgttttacgggaatttaaatacatttaga-tgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttc 109  Q
    ||||||| ||||||| |||||| ||| || ||||||| ||| ||||||||||||||||||| |||||  |||||||||||||||| |||||||||| |||    
T  7191 tgttttaagggaattcaaatac-tttggagtgaattccattgtttggataataatttgaagcattttcaaaatgatggaaatttacgaagtattttattc 7289  T
Q  110 aagtaaaaatttagagaatttaaaat 135  Q
    ||||  ||||||||||||||| ||||    
T  7290 aagt-taaatttagagaatttcaaat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 15875 - 15784
Alignment:
Q  35 ttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaa 127  Q
    |||| ||||||| ||| ||||||||||||||||||| |||||  ||||||||| |||||||||||||| ||||||||||  ||||||||||||    
T  15875 ttaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtatattgttcaagt-taaatttagagaa 15784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 16376 - 16289
Alignment:
Q  42 aattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaattt 130  Q
    ||||| ||| |||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||  |||| ||||||||||    
T  16376 aattccattgtttggataatcatttgaagaatttttaaaatgatggaaatttataaagtattttgttcaagt-taaatgtagagaattt 16289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 2917 - 2839
Alignment:
Q  35 ttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagt 113  Q
    |||| ||||||| ||| ||||||||||||||||||| |||||  ||||||||| |||||||||||||| ||||||||||    
T  2917 ttaggtgaattccattgtttggataataatttgaagaattttcaaaatgatgggaatttatgaagtatattgttcaagt 2839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 9609 - 9501
Alignment:
Q  21 gaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatt 120  Q
    ||||| |||||| || || | ||||| ||| |||||||||| |||||||| |||||  ||||||||||||||||| |||||||||||||||||  ||||     
T  9609 gaattcaaatactttgaggtaaattccattgtttggataatcatttgaagaattttcaaaatgatggaaatttataaagtattttgttcaagt-taaatg 9511  T
Q  121 tagagaattt 130  Q
    ||||||||||    
T  9510 tagagaattt 9501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 50332 - 50217
Alignment:
Q  19 gggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaa 118  Q
    ||||||| |||||| || |  ||||||| ||| |||| ||||||||||||||  ||||  ||||||||||||||||||||||| |||||||||||  |||    
T  50332 gggaattcaaatactttgatgtgaattccattgtttgaataataatttgaagagttttcaaaatgatggaaatttatgaagtactttgttcaagt-taaa 50234  T
Q  119 tttagagaatttaaaat 135  Q
    |||| ||||||| ||||    
T  50233 tttaaagaatttcaaat 50217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 109069 - 109193
Alignment:
Q  9 aatgttttacgggaatttaaatacatttagatgaattctattatttggataataatttgaagtatttttgaaatgatggaaatttatgaagtattttgtt 108  Q
    ||||||||  |||||||||||||| || |  ||||||| ||| ||||||||| ||||||||| |||||  ||||||| ||||||||| ||||||||| ||    
T  109069 aatgttttgagggaatttaaatactttgatgtgaattccattgtttggataagaatttgaagaattttcaaaatgat-gaaatttataaagtattttatt 109167  T
Q  109 caagtaaaaatttagagaatttaaaat 135  Q
    |||||  ||||||||| ||||| ||||    
T  109168 caagt-taaatttagataatttcaaat 109193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 11941 - 11865
Alignment:
Q  59 aataatttgaagtatttttgaaatgatggaaatttatgaagtattttgttcaagtaaaaatttagagaatttaaaat 135  Q
    |||||||||| | | |||| |||||||| ||||||||||||||||||||||||  | ||||||||||||||| ||||    
T  11941 aataatttgatgaaattttaaaatgatgaaaatttatgaagtattttgttcaaagataaatttagagaatttcaaat 11865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University