View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11835_low_91 (Length: 274)

Name: NF11835_low_91
Description: NF11835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11835_low_91
NF11835_low_91
[»] chr5 (30 HSPs)
chr5 (157-240)||(20692885-20692968)
chr5 (169-258)||(12704978-12705067)
chr5 (157-221)||(1898953-1899017)
chr5 (157-253)||(35403571-35403667)
chr5 (160-221)||(5732011-5732072)
chr5 (160-221)||(6767142-6767203)
chr5 (169-258)||(9812836-9812925)
chr5 (169-222)||(12766095-12766148)
chr5 (169-221)||(8513483-8513535)
chr5 (157-221)||(41163550-41163614)
chr5 (159-221)||(25417274-25417336)
chr5 (160-222)||(37263196-37263258)
chr5 (169-258)||(14152014-14152103)
chr5 (160-221)||(28856932-28856993)
chr5 (160-221)||(28857083-28857144)
chr5 (157-254)||(39728339-39728436)
chr5 (169-221)||(7866545-7866597)
chr5 (170-242)||(42086292-42086364)
chr5 (157-212)||(20255321-20255376)
chr5 (160-221)||(19572679-19572740)
chr5 (157-221)||(1538383-1538447)
chr5 (157-221)||(18136371-18136435)
chr5 (157-212)||(30349531-30349586)
chr5 (157-242)||(3653984-3654067)
chr5 (170-220)||(13664225-13664275)
chr5 (171-224)||(14974412-14974465)
chr5 (168-221)||(30995084-30995137)
chr5 (168-220)||(11845893-11845945)
chr5 (157-221)||(35813089-35813153)
chr5 (157-221)||(38297055-38297119)
[»] chr1 (33 HSPs)
chr1 (157-221)||(18915819-18915883)
chr1 (157-221)||(41663948-41664012)
chr1 (160-221)||(49078069-49078130)
chr1 (157-221)||(1764281-1764345)
chr1 (157-221)||(33418207-33418271)
chr1 (159-222)||(45361973-45362036)
chr1 (175-240)||(26258666-26258730)
chr1 (157-221)||(5855474-5855538)
chr1 (169-221)||(9659270-9659322)
chr1 (160-220)||(25165357-25165416)
chr1 (157-220)||(10422740-10422803)
chr1 (157-220)||(31152668-31152731)
chr1 (157-240)||(31576620-31576703)
chr1 (168-254)||(17358530-17358616)
chr1 (163-221)||(34334387-34334445)
chr1 (160-221)||(2981023-2981084)
chr1 (169-254)||(30927786-30927871)
chr1 (157-221)||(892389-892453)
chr1 (157-221)||(10173063-10173127)
chr1 (171-211)||(16956432-16956472)
chr1 (170-230)||(41743238-41743298)
chr1 (157-240)||(2567228-2567311)
chr1 (170-217)||(8763956-8764003)
chr1 (171-221)||(34719742-34719792)
chr1 (160-221)||(9853369-9853430)
chr1 (160-221)||(11397980-11398041)
chr1 (169-218)||(42744751-42744800)
chr1 (169-254)||(48798129-48798214)
chr1 (157-221)||(32823-32887)
chr1 (169-241)||(5503995-5504067)
chr1 (176-220)||(33004108-33004152)
chr1 (157-221)||(34877942-34878006)
chr1 (160-220)||(40288570-40288630)
[»] chr7 (28 HSPs)
chr7 (157-220)||(5069907-5069970)
chr7 (169-222)||(16802089-16802142)
chr7 (157-254)||(22973921-22974018)
chr7 (160-221)||(43925469-43925530)
chr7 (157-221)||(17748473-17748537)
chr7 (157-222)||(34659180-34659245)
chr7 (160-221)||(48804640-48804701)
chr7 (160-240)||(1797417-1797497)
chr7 (169-221)||(10047967-10048019)
chr7 (169-221)||(18785635-18785687)
chr7 (169-221)||(22993458-22993510)
chr7 (157-220)||(14650271-14650334)
chr7 (171-221)||(34127711-34127761)
chr7 (157-222)||(9685693-9685758)
chr7 (160-221)||(47341833-47341894)
chr7 (157-221)||(22268120-22268184)
chr7 (160-212)||(39420795-39420847)
chr7 (157-221)||(42032050-42032114)
chr7 (170-221)||(13095825-13095876)
chr7 (157-240)||(26423359-26423442)
chr7 (169-236)||(42210338-42210405)
chr7 (160-222)||(11607088-11607150)
chr7 (157-210)||(46414629-46414682)
chr7 (160-220)||(4195294-4195354)
chr7 (169-209)||(21530714-21530754)
chr7 (157-221)||(27875179-27875242)
chr7 (157-221)||(43862063-43862127)
chr7 (168-240)||(45447935-45448007)
[»] chr4 (33 HSPs)
chr4 (157-219)||(34667695-34667757)
chr4 (157-221)||(8888978-8889042)
chr4 (157-218)||(41339489-41339550)
chr4 (157-221)||(1940865-1940929)
chr4 (157-221)||(6779167-6779231)
chr4 (169-221)||(47078426-47078478)
chr4 (157-221)||(52950038-52950102)
chr4 (157-221)||(53599016-53599080)
chr4 (157-220)||(2559263-2559326)
chr4 (170-241)||(36145286-36145357)
chr4 (160-221)||(1446785-1446846)
chr4 (157-250)||(7000480-7000573)
chr4 (160-221)||(29895746-29895807)
chr4 (160-221)||(55920993-55921054)
chr4 (157-221)||(295623-295687)
chr4 (160-212)||(6032740-6032792)
chr4 (169-221)||(27531748-27531800)
chr4 (160-242)||(33647680-33647762)
chr4 (171-221)||(38168227-38168277)
chr4 (157-242)||(2686525-2686610)
chr4 (184-241)||(8824547-8824604)
chr4 (157-222)||(13552070-13552135)
chr4 (160-221)||(24166409-24166470)
chr4 (157-221)||(13073494-13073558)
chr4 (169-221)||(15840025-15840077)
chr4 (169-221)||(36262856-36262908)
chr4 (157-240)||(5472920-5473003)
chr4 (169-240)||(30317201-30317272)
chr4 (157-240)||(38075389-38075472)
chr4 (169-240)||(38841438-38841508)
chr4 (160-218)||(27248387-27248445)
chr4 (169-254)||(4736565-4736650)
chr4 (157-209)||(38165983-38166035)
[»] scaffold0002 (2 HSPs)
scaffold0002 (160-221)||(527-588)
scaffold0002 (169-212)||(319388-319431)
[»] chr6 (16 HSPs)
chr6 (169-258)||(8612028-8612117)
chr6 (157-220)||(29333230-29333293)
chr6 (171-221)||(5253314-5253364)
chr6 (160-222)||(6606187-6606249)
chr6 (160-229)||(2271384-2271453)
chr6 (160-221)||(21016842-21016903)
chr6 (160-221)||(21898606-21898667)
chr6 (157-221)||(9179827-9179891)
chr6 (160-220)||(29444857-29444917)
chr6 (157-220)||(19230650-19230712)
chr6 (157-221)||(14107449-14107513)
chr6 (171-222)||(34954709-34954760)
chr6 (160-210)||(13468891-13468941)
chr6 (157-221)||(3588036-3588100)
chr6 (157-221)||(9147256-9147320)
chr6 (160-220)||(13036096-13036156)
[»] chr3 (31 HSPs)
chr3 (160-221)||(29135867-29135928)
chr3 (160-222)||(10040511-10040573)
chr3 (157-239)||(46529944-46530026)
chr3 (160-240)||(6462366-6462446)
chr3 (157-221)||(54261177-54261241)
chr3 (169-220)||(15320149-15320200)
chr3 (157-247)||(30735011-30735101)
chr3 (157-239)||(49082775-49082857)
chr3 (160-221)||(26207893-26207954)
chr3 (157-254)||(48341971-48342068)
chr3 (157-222)||(49543470-49543535)
chr3 (160-220)||(37092598-37092658)
chr3 (157-220)||(3136786-3136849)
chr3 (157-220)||(45877405-45877468)
chr3 (160-222)||(25294914-25294976)
chr3 (171-221)||(42412866-42412916)
chr3 (168-221)||(7328806-7328859)
chr3 (157-242)||(32873620-32873704)
chr3 (160-221)||(47471786-47471847)
chr3 (169-221)||(7613018-7613070)
chr3 (157-221)||(35315907-35315971)
chr3 (157-221)||(47749196-47749260)
chr3 (157-221)||(49198302-49198366)
chr3 (157-212)||(13893877-13893932)
chr3 (157-212)||(33560811-33560866)
chr3 (169-235)||(43738408-43738473)
chr3 (176-242)||(52364871-52364937)
chr3 (157-222)||(11687200-11687265)
chr3 (157-242)||(51683025-51683110)
chr3 (157-221)||(3763002-3763066)
chr3 (157-221)||(35923715-35923779)
[»] chr8 (26 HSPs)
chr8 (160-240)||(38922486-38922566)
chr8 (160-221)||(10927564-10927625)
chr8 (157-222)||(14846531-14846596)
chr8 (160-240)||(38235863-38235943)
chr8 (157-236)||(13085479-13085558)
chr8 (157-212)||(44893378-44893433)
chr8 (160-221)||(1013068-1013129)
chr8 (157-254)||(33401857-33401954)
chr8 (157-221)||(583769-583833)
chr8 (160-220)||(2467210-2467270)
chr8 (157-221)||(6100427-6100491)
chr8 (173-221)||(11785887-11785935)
chr8 (160-240)||(24837200-24837280)
chr8 (157-220)||(8141057-8141120)
chr8 (160-254)||(17981399-17981493)
chr8 (160-221)||(14666162-14666223)
chr8 (160-221)||(15884646-15884707)
chr8 (160-221)||(16893895-16893956)
chr8 (157-221)||(22810035-22810099)
chr8 (157-221)||(33935826-33935890)
chr8 (157-221)||(34846769-34846832)
chr8 (168-221)||(2964042-2964095)
chr8 (157-242)||(18091356-18091440)
chr8 (175-220)||(30903309-30903354)
chr8 (157-254)||(34710625-34710722)
chr8 (160-221)||(45521127-45521188)
[»] chr2 (24 HSPs)
chr2 (160-222)||(39201598-39201660)
chr2 (157-221)||(21180405-21180469)
chr2 (157-221)||(38005353-38005417)
chr2 (169-221)||(41220598-41220650)
chr2 (160-221)||(7747228-7747289)
chr2 (160-221)||(18902621-18902682)
chr2 (169-242)||(21286407-21286480)
chr2 (170-242)||(41187813-41187885)
chr2 (160-221)||(331455-331516)
chr2 (160-221)||(8410085-8410146)
chr2 (160-221)||(37804982-37805043)
chr2 (169-209)||(22593098-22593138)
chr2 (157-221)||(39806976-39807040)
chr2 (157-220)||(6358243-6358306)
chr2 (157-220)||(12864175-12864238)
chr2 (157-220)||(19976899-19976962)
chr2 (157-220)||(29422166-29422229)
chr2 (169-240)||(29653590-29653661)
chr2 (157-220)||(34356157-34356220)
chr2 (175-221)||(10823029-10823075)
chr2 (160-221)||(2550822-2550883)
chr2 (157-222)||(37560124-37560189)
chr2 (160-220)||(7787010-7787070)
chr2 (159-235)||(25549681-25549757)
[»] scaffold0006 (1 HSPs)
scaffold0006 (157-221)||(68471-68535)
[»] scaffold0332 (1 HSPs)
scaffold0332 (157-220)||(15285-15348)
[»] scaffold0209 (1 HSPs)
scaffold0209 (157-221)||(12529-12593)
[»] scaffold0376 (1 HSPs)
scaffold0376 (168-221)||(12635-12688)
[»] scaffold0005 (1 HSPs)
scaffold0005 (160-221)||(271165-271226)
[»] scaffold0079 (1 HSPs)
scaffold0079 (179-221)||(8151-8193)
[»] scaffold0029 (1 HSPs)
scaffold0029 (157-222)||(40998-41063)
[»] scaffold0384 (1 HSPs)
scaffold0384 (168-220)||(5938-5990)


Alignment Details
Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 20692885 - 20692968
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| || |||||  |||| ||||||||||||    
T  20692885 tgtttgggctctagtggcaaagagcttcttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttg 20692968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 12704978 - 12705067
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgcttct 258  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||  ||    ||||||||||||| | |||||||||||||    
T  12704978 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttct 12705067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 1898953 - 1899017
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||| ||||||||    
T  1898953 tgtttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattc 1899017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 35403667 - 35403571
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatg 253  Q
    ||||||||||  |||||||||||||| |||| |||||||||| |||| |||||||| |||||||||||| |  ||||||||||| | |||| |||||    
T  35403667 tgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatg 35403571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 5732072 - 5732011
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  5732072 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 5732011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 6767203 - 6767142
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  6767203 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 6767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 9812836 - 9812925
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgcttct 258  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||  ||    ||||||||||| | | |||||||||||||    
T  9812836 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttct 9812925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 12766095 - 12766148
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  12766095 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattct 12766148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 8513483 - 8513535
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  8513483 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 8513535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 41163614 - 41163550
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| ||| |||||||||||||||||||| ||||||||    
T  41163614 tgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattc 41163550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 25417336 - 25417274
Alignment:
Q  159 tttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||  |||||||||||||| |||| |||||||||| ||||||||||||| ||||||||    
T  25417336 tttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattc 25417274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 37263196 - 37263258
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||| ||| |||||||||    
T  37263196 ttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattct 37263258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 14152014 - 14152103
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgcttct 258  Q
    |||||||||||||| |||| || || ||||| |||||||||||| ||||||||| | ||  ||||||||||| | | |||||||||||||    
T  14152014 agtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttct 14152103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 28856932 - 28856993
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  28856932 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattc 28856993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 28857083 - 28857144
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  28857083 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattc 28857144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 39728339 - 39728436
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    ||||||||||  ||||||||||||||  ||| ||| |||||||||||||||||| | ||||||| | |||| ||||||| |||| | | |||||||||    
T  39728339 tgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgcatgc 39728436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 7866545 - 7866597
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| ||||||||||||| |||||||||| ||||||||    
T  7866545 agtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattc 7866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 42086292 - 42086364
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||||||||| |||| ||||||||||||| |||||||||| ||||||||  || |  |||||||||||||    
T  42086292 gtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgac 42086364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 20255321 - 20255376
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    |||||||||| | |||||||||||||  |||||||||||||| |||||||||||||    
T  20255321 tgtttgggctctggtggcaaggagctcattctaaggacgtactcggggaataccgg 20255376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 19572679 - 19572740
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| || |||||    
T  19572679 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattc 19572740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 1538383 - 1538447
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| ||||  ||||||||  ||||||||||||| ||||||||    
T  1538383 tgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattc 1538447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 18136435 - 18136371
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| || |||||| |||| ||||||||| ||||||||    
T  18136435 tgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattc 18136371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 30349531 - 30349586
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    ||||||||||  |||||||||||| | |||| ||||||||| ||||||||||||||    
T  30349531 tgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgg 30349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 3654067 - 3653984
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||||||  |||| ||| |||||  ||| |||||||||||||| ||||||||| ||||||||  ||||  |||||||||||||    
T  3654067 tgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggttcgattcctagag--aacaacgcttgac 3653984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 13664225 - 13664275
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||||| |||| ||||||||| |  |||||||||||||||||||    
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccggattcgatt 13664275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 14974465 - 14974412
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaa 224  Q
    ||||||||||||  ||||||||||||| |||| ||||| ||| |||||||||||    
T  14974465 tggcaaggagctcattctaaggacgtatccggagaatatcgggttcgattctaa 14974412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 30995084 - 30995137
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||||||| |||| ||||||||||  |||||||||| | ||||||||    
T  30995084 tagtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattc 30995137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 11845945 - 11845893
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||||||| |||| ||||||||||||| | |||| ||| |||||||    
T  11845945 tagtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatt 11845893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 35813153 - 35813089
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||   |||||||| ||||  ||| ||||||||||||| |||||||||| ||||||||    
T  35813153 tgtttgggctgcggtggcaagaagctcattccaaggacgtacccgaggaataccgggttcgattc 35813089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 38297119 - 38297055
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||||||||| ||||  | |||||||||| ||| ||||    
T  38297119 tgtttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggttcaattc 38297055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 18915819 - 18915883
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  18915819 tgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattc 18915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 41664012 - 41663948
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  41664012 tgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattc 41663948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 49078069 - 49078130
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  49078069 ttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattc 49078130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 1764345 - 1764281
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||   ||||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  1764345 tgtttgggcttctgtggcaaggagctccttccaaggacgtacccgggaaataccggattcgattc 1764281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 33418271 - 33418207
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| || ||||||||||| ||||||||||||||||||    
T  33418271 tgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattc 33418207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 45362036 - 45361973
Alignment:
Q  159 tttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||  |||||||||||||| |||| |||||||||||| ||||||||||| |||||||||    
T  45362036 tttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattct 45361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 26258666 - 26258730
Alignment:
Q  175 aaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  26258666 aaggagctccttccaaagacgtacccggggaataccggattcgattctcag-gaagacaacgcttg 26258730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 5855474 - 5855538
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| |||||||||  ||||||||||||| ||||||||    
T  5855474 tgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattc 5855538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9659322 - 9659270
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||||||  |||||||||||||| ||||||||||||| ||||||||    
T  9659322 agtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattc 9659270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 25165357 - 25165416
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||| ||||||||||||||| |||| ||| ||||||| ||||||||||||||||||||    
T  25165357 ttgggctctagtggcaaggagctccttccaag-acgtacctggggaataccggattcgatt 25165416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 10422740 - 10422803
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||| |||||||||||||| |||| || ||||||  ||||||||||||| |||||||    
T  10422740 tgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatt 10422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 31152668 - 31152731
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||||| |||||||||||||||  ||| ||||| |||||| ||||||||||| |||||||    
T  31152668 tgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatt 31152731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 31576703 - 31576620
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||||| |||||||||||||||  ||||||||||||| || |  |||||||| ||||||||| || | |||||| |||||    
T  31576703 tgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttg 31576620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 17358616 - 17358530
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    |||||||||||||||  ||  |||||||||   |||||||||||| ||||||||| || || ||||||||||||| |||| ||||||    
T  17358616 tagtggcaaggagctcatttcaaggacgtatttggggaataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgc 17358530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 34334445 - 34334387
Alignment:
Q  163 ggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||| |||||||||||||||  ||| ||||||||| |||||||||||||| ||||||||    
T  34334445 ggctttagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattc 34334387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 2981084 - 2981023
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||| ||||||||||||||| |||| | ||||||| ||||||||||| || ||||||||    
T  2981084 ttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattc 2981023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 30927871 - 30927786
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    |||||||||||||| |||| ||||||||||| ||| |||| ||| |||||||   ||||  ||||||||||| | |||||||||||    
T  30927871 agtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgc 30927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 892453 - 892389
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||  |||||||||  ||||||||||||| ||||||||    
T  892453 tgtttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggttcgattc 892389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 10173127 - 10173063
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||| ||| |||| ||||||||| | |||||||||||||||| ||||    
T  10173127 tgtttgggctccagtggcaaggtgctccttccaaggacgtatctggggaataccggattcaattc 10173063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 16956432 - 16956472
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccg 211  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccg 16956472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Original strand, 41743238 - 41743298
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaa 230  Q
    ||||||||||||| |||| ||||||||| ||| |||||||||| ||||||||  |||||||    
T  41743238 gtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccagagaaa 41743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 2567228 - 2567311
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    ||||||||||  | |||||||||||| |||| |||||||||  ||| ||||||||| ||||||| |  | ||||||||||||||    
T  2567228 tgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttg 2567311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 8763956 - 8764003
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcg 217  Q
    ||||||||||||| |||| |||||||||||||||||||| ||| ||||    
T  8763956 gtggcaaggagctccttccaaggacgtacccggggaatatcgggttcg 8764003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 34719742 - 34719792
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||| |||| ||||||||||| ||||||||| || ||||||||    
T  34719742 tggcaaggagctccttccaaggacgtacctggggaatactgggttcgattc 34719792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 9853430 - 9853369
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||| ||||||||  |||||||| ||||||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattc 9853369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 11398041 - 11397980
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||| ||| |||| ||||||||| ||||||||    
T  11398041 ttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattc 11397980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 42744751 - 42744800
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcga 218  Q
    |||||||| ||||| |||| |||||||||||| ||||||||||| |||||    
T  42744751 agtggcaatgagctccttccaaggacgtacccagggaataccgggttcga 42744800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 48798214 - 48798129
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    |||||||||||||| |||| || |||||| |||||||||| ||| |||||||   || |  ||||||||||||||| || ||||||    
T  48798214 agtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgc 48798129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 32823 - 32887
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||| ||||| |||| ||||||||||| |||||||| ||| | ||||||    
T  32823 tgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattc 32887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 5503995 - 5504067
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttga 241  Q
    |||||||||||||| ||||  || ||||| | |||||||| | | ||||||||| || |||||||||||||||    
T  5503995 agtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattctcagggaaaacaacgcttga 5504067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 33004152 - 33004108
Alignment:
Q  176 aggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||| |||| ||||||||| |||||||||| |||||||||||    
T  33004152 aggagctccttccaaggacgtatccggggaatatcggattcgatt 33004108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 34877942 - 34878006
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||  |||| |||||||||  ||||||||||| | ||||||||    
T  34877942 tgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattc 34878006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 40288630 - 40288570
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||  ||||||||||||||  ||| |||||||||  ||||||||||||| |||||||    
T  40288630 ttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatt 40288570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 5069970 - 5069907
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  5069970 tgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatt 5069907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 16802089 - 16802142
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  16802089 agtggcaatgagctccttccaaggacgtacccggggaataccggattcgattct 16802142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 22973921 - 22974018
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    |||||||||| || |||| ||||||| |||| |||||||||| ||||||||||||| ||||||||| || |  ||||||||||| | | |||||||||    
T  22973921 tgtttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgc 22974018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 43925469 - 43925530
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  43925469 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 43925530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 17748537 - 17748473
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| |||||||||| ||||||||| |||||||||  ||||||||||||| ||||||||    
T  17748537 tgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattc 17748473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 34659180 - 34659245
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  |||||||||||||| |||| | ||| |||||||||||||||||| |||||||||    
T  34659180 tgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattct 34659245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 48804640 - 48804701
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  48804640 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 48804701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 1797417 - 1797497
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||  |||||||||||||| |||| ||||||||| ||| |||||||||| ||||||||  || | ||||||||||||    
T  1797417 ttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttg 1797497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 10048019 - 10047967
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  10048019 agtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 10047967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 18785635 - 18785687
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||| |||| |||| |||||||||||||||||||||||| ||||||||    
T  18785635 agtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattc 18785687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 22993510 - 22993458
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| |||||||||||||||||||| ||| ||||||||    
T  22993510 agtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattc 22993458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 14650271 - 14650334
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||| || ||||||||||||||| |||| |||||||||||||| ||||| ||| |||||||    
T  14650271 tgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatt 14650334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 34127761 - 34127711
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||| || |||| |||||||||||||||||||||||| ||||||||    
T  34127761 tggcaaggaactccttccaaggacgtacccggggaataccgggttcgattc 34127711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 9685693 - 9685758
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  |||||||||||||| |||| ||| ||||| |||||||||| ||| |||||||||    
T  9685693 tgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattct 9685758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 47341833 - 47341894
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  ||||||||||||||  ||| |||||||||||||||||||||||  ||||||||    
T  47341833 ttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattc 47341894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 22268184 - 22268120
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||||||||  ||| ||||||||||  |||||||||||| ||||||||    
T  22268184 tgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattc 22268120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 39420795 - 39420847
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    ||||||| ||||||||||||||| |||  ||||| ||||||||||||||||||    
T  39420795 ttgggctctagtggcaaggagctcctttcaaggaggtacccggggaataccgg 39420847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 42032050 - 42032114
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||| ||||| |||| |||| |||||||||||||||||||||| | ||||||||    
T  42032050 tgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattc 42032114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 13095825 - 13095876
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||||| |||  |||||||||||||||||||||||| ||| ||||    
T  13095825 gtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattc 13095876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 26423442 - 26423359
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    ||||||||||  ||||||||| | || |||| ||||||||||||  |||||||||| ||||||||  || | ||||||||||||    
T  26423442 tgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttg 26423359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 42210405 - 42210338
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacg 236  Q
    ||||||||||||||  ||| ||||||||| ||| |||||||||| ||||||||  || ||||||||||    
T  42210405 agtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacg 42210338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 11607088 - 11607150
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||  ||||||||||| || |||| |||||||||  ||||||||| |||||||||||||    
T  11607088 ttgggctccagtggcaaggaactccttccaaggacgtattcggggaatatcggattcgattct 11607150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 46414629 - 46414682
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaatacc 210  Q
    ||||||||||   ||||||||||||| ||| |||||||||||||| ||||||||    
T  46414629 tgtttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaatacc 46414682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 4195354 - 4195294
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||  |||||||||||||| || | ||||||||| |||||||||||||  |||||||    
T  4195354 ttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatt 4195294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 21530714 - 21530754
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaatac 209  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  21530714 agtggcaaggagctccttccaaggacgtacctggggaatac 21530754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 27875242 - 27875179
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||| |||| |||| ||| ||||| | |||||||||||||||||||||    
T  27875242 tgtttgggctccagtggcaagtagctccttccaag-acgtatctggggaataccggattcgattc 27875179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 43862127 - 43862063
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||| |||||||||||  ||| || |||||| | |||||||||||| ||||||||    
T  43862127 tgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattc 43862063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 45447935 - 45448007
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    ||||||||||||||| |||| ||||||||||||| | |||||| | |||||||   || || |||||||||||    
T  45447935 tagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttg 45448007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 34667757 - 34667695
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgat 219  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  34667757 tgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgat 34667695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 8888978 - 8889042
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  8888978 tgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattc 8889042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 41339550 - 41339489
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcga 218  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||| ||||||||| |||||    
T  41339550 tgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcga 41339489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 1940929 - 1940865
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||| |||| ||| ||||||||    
T  1940929 tgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattc 1940865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 6779167 - 6779231
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||||||||||||| ||||||||||| || ||||||||| ||||||||    
T  6779167 tgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattc 6779231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 47078426 - 47078478
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  47078426 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 47078478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 52950038 - 52950102
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||||||||| |||| ||||||||||| |||||||| ||| ||||||||    
T  52950038 tgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattc 52950102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 53599016 - 53599080
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  | |||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  53599016 tgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 53599080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 2559263 - 2559326
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  |||||||| ||||| |||| ||||||||||| ||||||||||||||||||||    
T  2559263 tgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatt 2559326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 36145357 - 36145286
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttga 241  Q
    |||||||||||||  ||| |||||||||||||||||||||||| ||||||||  || | |||||||||||||    
T  36145357 gtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttga 36145286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 1446785 - 1446846
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  1446785 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 1446846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 7000480 - 7000573
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgc 250  Q
    ||||||||||| ||||||||| |||| |||| |||||||||| ||||||||||||  ||||||||  ||  | ||||||||||| | |||||||    
T  7000480 tgtttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccgagttcgattcccaggaagaacaacgcttggccaatgtgc 7000573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 29895746 - 29895807
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  29895746 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 29895807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 55920993 - 55921054
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||| |||||||||||||||| ||||||||    
T  55920993 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattc 55921054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 295687 - 295623
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||||| |  |||||||||||||| |||||||||||| ||||||||||    
T  295687 tgtttgggctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattc 295623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 6032792 - 6032740
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    |||||||  |||||||||||||| |||| ||||||||||||||||||||||||    
T  6032792 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgg 6032740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 27531800 - 27531748
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| |||||||||||| ||||||||||| ||||||||    
T  27531800 agtggcaaggagctccttccaaggacgtacccagggaataccgggttcgattc 27531748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 33647680 - 33647762
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||| ||||||||||||||| |||  ||||||||| | |||||||||||| |||||||   || || |||||||||||||    
T  33647680 ttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgac 33647762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 38168227 - 38168277
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||| |||| |||||||||||||||||||||| | ||||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattc 38168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 2686610 - 2686525
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    |||||||||| |||||||||||||||| ||| || ||||||| ||| ||||| | ||||||||| | || | ||||||| ||||||    
T  2686610 tgtttgggctttagtggcaaggagctttttccaaagacgtactcggagaatatcagattcgattttcaggggaaacaacacttgac 2686525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 8824547 - 8824604
Alignment:
Q  184 cttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttga 241  Q
    ||||||| |||||| |  |||||||||||||||||||| ||||||||| |||||||||    
T  8824547 cttctaaagacgtatctagggaataccggattcgattccaagagaaaaaaacgcttga 8824604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 13552070 - 13552135
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  |||||||||||||| |||| ||| ||||| |||||||||| ||| |||||||||    
T  13552070 tgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattct 13552135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 24166409 - 24166470
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| |||||||||| |||||||||| || ||||||||    
T  24166409 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattc 24166470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 13073494 - 13073558
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||| ||||| |||| ||||||||||| || ||||||||  ||||||||    
T  13073494 tgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattc 13073558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 15840077 - 15840025
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| ||||||||||  |||||||||||| ||||||||    
T  15840077 agtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattc 15840025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 36262908 - 36262856
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||| |||| |||| |||||||||||||| ||||||||| ||||||||    
T  36262908 agtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattc 36262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 5473003 - 5472920
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    ||||||||||  ||||||||||||||  ||  ||||||||| |||||||||||| | || |||||| || | ||||||||||||    
T  5473003 tgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttg 5472920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 30317201 - 30317272
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||||||| | ||| ||||||||||| ||||||||| | | ||||||||| ||||  |||||||||||    
T  30317201 agtggcaaggagttccttttaaggacgtactcggggaatatcaggttcgattctcagagggaacaacgcttg 30317272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 38075389 - 38075472
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    ||||||||||  || ||||||||| | |||| |||||||||  ||| ||||||||| ||||||||| || | ||||||||||||    
T  38075389 tgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttg 38075472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 38841508 - 38841438
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||| |||||||||| |||||||||| |||| |||||| | ||||||| | || ||||||||||||||    
T  38841508 agtggcaatgagcttcttccaaggacgtactcggg-aataccaggttcgatttttagggaaaacaacgcttg 38841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 27248387 - 27248445
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcga 218  Q
    |||||||  |||||||| ||||| |||| ||||||||| |||||||||||||| |||||    
T  27248387 ttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcga 27248445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 4736565 - 4736650
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    |||||||| ||||| |||  ||||| ||||||| |||||||||| ||| ||||| || | |||||||| ||| | |||||||||||    
T  4736565 agtggcaatgagctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgc 4736650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 38165983 - 38166035
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaatac 209  Q
    ||||||||||  | |||||||||||| |||| ||||||||| |||||||||||    
T  38165983 tgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatac 38166035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 527 - 588
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  527 ttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 319388 - 319431
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||    
T  319388 agtggcaaggagctccttccaaggacgtatccggggaataccgg 319431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 8612117 - 8612028
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgcttct 258  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||  ||    ||||||||||||| | |||||||||||||    
T  8612117 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttct 8612028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 29333293 - 29333230
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||||| ||||||||| ||||| |||| |||||||||||| ||||||||||| |||||||    
T  29333293 tgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggttcgatt 29333230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 5253364 - 5253314
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  5253364 tggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 5253314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 6606249 - 6606187
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||| | |||||||||||||| |||| ||||||||| |||||||||||||| |||||||||    
T  6606249 ttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattct 6606187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 2271453 - 2271384
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaa 229  Q
    |||||||  |||||||||||||| |||| |||||||||  ||||||||||||| ||||||||| ||||||    
T  2271453 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcagagaa 2271384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 21016903 - 21016842
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| | |||||||||||||||||||||| ||||||||    
T  21016903 ttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgattc 21016842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 21898606 - 21898667
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  21898606 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 21898667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 9179891 - 9179827
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||||||||  ||| |||||||||||| ||||||||||| ||||||||    
T  9179891 tgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattc 9179827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 29444917 - 29444857
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||| ||||||||||||||| |||| || ||||||||||||| ||||||| |||||||    
T  29444917 ttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatt 29444857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 19230712 - 19230650
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  |||||||||||||| |||| |||||||||| | |||||||||||||||||||    
T  19230712 tgtttgggctccagtggcaaggagctccttccaaggacgtactc-gggaataccggattcgatt 19230650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 14107513 - 14107449
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| || ||||||  ||||||||||||| ||||||||    
T  14107513 tgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattc 14107449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 34954760 - 34954709
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||||||| |||| ||||||||||| |||||||||| | |||||||||    
T  34954760 tggcaaggagctccttccaaggacgtacctggggaataccaggttcgattct 34954709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 13468891 - 13468941
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaatacc 210  Q
    ||||||| | ||||||||||||| |||| ||||||||| ||||||||||||    
T  13468891 ttgggctctggtggcaaggagctccttccaaggacgtatccggggaatacc 13468941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 3588100 - 3588036
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||| || ||| || |||||| |||| ||||||||| ||||||||    
T  3588100 tgtttgggctcaagtggcaaggagtttattccaaagacgtatccggagaataccgggttcgattc 3588036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 9147256 - 9147320
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||| ||||||||  ||| ||||||||||| |||||||| ||| ||||||||    
T  9147256 tgtttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattc 9147320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 13036156 - 13036096
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||  |||||||||||||| |||| |||||||||  ||||||||| ||| |||||||    
T  13036156 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgatt 13036096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 29135867 - 29135928
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  29135867 ttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattc 29135928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 10040511 - 10040573
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  10040511 ttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattct 10040573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 46530026 - 46529944
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgctt 239  Q
    ||||||||||  |||||||||||||| |||  ||||||||||| |||||||||||| ||||||||| |||| |||||| ||||    
T  46530026 tgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgattctcagaggaaacaatgctt 46529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 6462366 - 6462446
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    ||||||| ||||||||||||||| |||| ||||||||| | |||||||||||| ||||||||  || || |||||||||||    
T  6462366 ttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttg 6462446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 54261177 - 54261241
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| ||||||||||| |||||||||||| ||||||||    
T  54261177 tgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattc 54261241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 15320149 - 15320200
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  15320149 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 15320200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 30735101 - 30735011
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatg 247  Q
    |||||||||| |||||||||||||||  ||| ||||||| || ||||||||||||  ||||||||| || |  ||||||||||||| ||||    
T  30735101 tgtttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacgcttgaccaatg 30735011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 49082775 - 49082857
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgctt 239  Q
    ||||||||||  ||||||| |||||| |||||||||||||| |||||||||||||  ||||||||  || || ||||||||||    
T  49082775 tgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgctt 49082857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 26207954 - 26207893
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||| |||||||||||||||||| ||||||||    
T  26207954 ttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattc 26207893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 48341971 - 48342068
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    ||||||||||  |||||||||||||| |||| ||||||||||| |||||||||||| ||| ||||  || |  ||||||||||| ||| || ||||||    
T  48341971 tgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgc 48342068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 49543470 - 49543535
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||||| ||||||||||||||| |||| ||||||||| || ||||||| ||| |||||||||    
T  49543470 tgtttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattct 49543535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 37092658 - 37092598
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||  ||||||||||||||||||| ||||||||||||| |||||| |||||| ||||    
T  37092658 ttgggctccagtggcaaggagcttcttccaaggacgtacccgtggaatatcggattagatt 37092598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 3136849 - 3136786
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||   |||||||| |||| |||  ||||||||||||||||||||||||||||||||    
T  3136849 tgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgatt 3136786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 45877405 - 45877468
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  |||||||||||||  |||| ||||||||| |||||||||||||| |||||||    
T  45877405 tgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatt 45877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 25294914 - 25294976
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| || ||||||    
T  25294914 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattct 25294976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 42412916 - 42412866
Alignment:
Q  171 tggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  42412916 tggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 42412866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 7328806 - 7328859
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||||| | |||| ||||||||||||||| |||||||| ||||||||    
T  7328806 tagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattc 7328859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 32873704 - 32873620
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||||||  ||||||||||||||  ||| |||||||||||| ||||||||| | ||||||||  || || |||||||||||||    
T  32873704 tgtttgggctccagtggcaaggagctcattccaaggacgtaccc-gggaataccaggttcgattcctagggagaacaacgcttgac 32873620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 47471786 - 47471847
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||| ||||||||| ||||| |||| |||||||||||  ||||||||||| ||||||||    
T  47471786 ttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggttcgattc 47471847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 7613070 - 7613018
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| ||||||||||  |||||||||||| ||||||||    
T  7613070 agtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattc 7613018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 35315907 - 35315971
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||| ||||| |||| |||||||||||||| ||||| ||| ||||||||    
T  35315907 tgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattc 35315971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 47749260 - 47749196
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||| || |||||||||| ||||||||| || ||||||||||| ||||||||    
T  47749260 tgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattc 47749196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 49198302 - 49198366
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||| ||||||| |||||| |||||| || |||||||||||||| ||||||||    
T  49198302 tgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattc 49198366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 13893877 - 13893932
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    ||||||||||  |||||||||||||| |||| ||||||||  ||||||||||||||    
T  13893877 tgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgg 13893932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 33560811 - 33560866
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    ||||||||||  |||||||||||||| |||| ||||| ||||| ||||||||||||    
T  33560811 tgtttgggcttcagtggcaaggagctccttccaaggatgtacctggggaataccgg 33560866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 43738408 - 43738473
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaac 235  Q
    |||| |||| ||||||||| ||||||||| | || ||||||||| ||||||||| ||||||||||||    
T  43738408 agtgacaagaagcttcttcaaaggacgtatc-ggagaataccgggttcgattctcagagaaaacaac 43738473  T

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Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 52364937 - 52364871
Alignment:
Q  176 aggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||| |||| |||||||||||||||||||||||  ||||||||  |||   |||||||||||||    
T  52364937 aggagctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgac 52364871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 11687265 - 11687200
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  ||||||||| |||| |||| ||||||||||| || ||||||||| || ||||||    
T  11687265 tgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattct 11687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 51683110 - 51683025
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||||||  |||||| ||||||| |||| || |||||| |||||||||||| | ||||||||  || |  |||||||||||||    
T  51683110 tgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgac 51683025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 3763002 - 3763066
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||| ||| ||||| ||| ||||| |||  ||||||||| ||||| |||||||||||||||||    
T  3763002 tgtttgagctctagtgacaaagagctcctttcaaggacgtatccgggaaataccggattcgattc 3763066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 35923779 - 35923715
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||| |||||  ||| ||||||||||| || ||||||| | ||||||||    
T  35923779 tgtttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgattc 35923715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 38922566 - 38922486
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||  |||||||||||||| |||| |||||||||||||||||||||||| ||||||||  ||||  |||||||||||    
T  38922566 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttg 38922486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 10927564 - 10927625
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  ||||||||||||||||||  |||||||||||||||||||||||| ||||||||    
T  10927564 ttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattc 10927625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 14846531 - 14846596
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  | ||||||| |||| ||||||||||||||||||||||||||||| |||||||||    
T  14846531 tgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattct 14846596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 38235863 - 38235943
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||  ||||||||||| ||||||| ||||||||||| ||| | |||||||||||||||  ||||||||||| |||||    
T  38235863 ttgggctccagtggcaaggaacttcttccaaggacgtacctgggaagtaccggattcgattcccagagaaaacaatgcttg 38235943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 13085479 - 13085558
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacg 236  Q
    ||||||||||  |||||| ||||||| |||| ||||||||| |||||||||||||| ||||||||| ||||  |||||||    
T  13085479 tgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacg 13085558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Complemental strand, 44893433 - 44893378
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccgg 212  Q
    ||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||    
T  44893433 tgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgg 44893378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 1013129 - 1013068
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  ||||||||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  1013129 ttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattc 1013068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 33401954 - 33401857
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    ||||||||||  |||||||||||||| |||  |||||||||| ||||||||||||| ||||||| | || |  |||||| |||||| | |||||||||    
T  33401954 tgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgc 33401857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 583769 - 583833
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||||||||| |||| |||||||||| || | |||||||| ||||||||    
T  583769 tgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattc 583833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 220
Target Start/End: Complemental strand, 2467270 - 2467210
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| |||||||    
T  2467270 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatt 2467210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 6100427 - 6100491
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||  ||||||||| |||||||||||||| ||||||||    
T  6100427 tgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattc 6100491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 11785887 - 11785935
Alignment:
Q  173 gcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  11785887 gcaaggagctcattccaaggacgtacccggggaataccggattcgattc 11785935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 24837200 - 24837280
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||  |||||||||||||| |||| ||| |||||||||||||||||||  ||||||||  || || |||||||||||    
T  24837200 ttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttg 24837280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 8141057 - 8141120
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  |||||||||||||| |||| |||||||||  ||||||||||||| |||||||    
T  8141057 tgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatt 8141120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 17981399 - 17981493
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    |||||||  |||||||||||||| |||| ||||| ||||||||| |||||||| ||||||||  || |  |||||| |||||| | |||||||||    
T  17981399 ttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgc 17981493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 14666223 - 14666162
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  ||||||||||||||  ||| ||||||||| |||||||||||||| ||||||||    
T  14666223 ttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattc 14666162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 15884707 - 15884646
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  ||||| |||||||| |||| ||||||||||| |||||||||||| ||||||||    
T  15884707 ttgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattc 15884646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 16893895 - 16893956
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||||||||| || |||| || |||||| |||||||||| ||| ||||||||    
T  16893895 ttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattc 16893956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 22810035 - 22810099
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||||||||| |||| ||||||||| |||| ||| | ||| ||||||||    
T  22810035 tgtttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattc 22810099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 33935890 - 33935826
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||| |||||||||| ||| |||||| ||||||  |||||||||||||||||||    
T  33935890 tgtttgggctccagttgcaaggagctccttttaaggatgtacccaaggaataccggattcgattc 33935826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 34846769 - 34846832
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  ||||||||||||||  ||| |||||||||||| ||||||||||| ||||||||    
T  34846769 tgtttgggctccagtggcaaggagctcattccaaggacgtaccc-gggaataccgggttcgattc 34846832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 2964042 - 2964095
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| |||| |||| ||| |||||||||||||||||||  ||||||||    
T  2964042 tagtggcaagtagctccttccaagaacgtacccggggaataccgtgttcgattc 2964095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 18091356 - 18091440
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||||||  ||||||||||||||| ||| ||||||| ||||| | ||||||  |||| ||||| ||| ||||||||| |||||    
T  18091356 tgtttgggctccagtggcaaggagcttattccaaggacgcacccgtgaaataccaaattcaattctcaga-aaaacaacgtttgac 18091440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 30903309 - 30903354
Alignment:
Q  175 aaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||||| || ||||||  |||||||||||||||||||||    
T  30903309 aaggagcttcttccaatgacgtattcggggaataccggattcgatt 30903354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 34710722 - 34710625
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgactaatgtgcatgc 254  Q
    ||||||||||   |||||||| || |||||| |||||||||| |||  |||||||||||||||||  || | ||||||| |||| ||| || ||||||    
T  34710722 tgtttgggctccggtggcaagaagtttcttccaaggacgtactcggaaaataccggattcgattcccaggggaaacaacacttggctagtgcgcatgc 34710625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 45521127 - 45521188
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||| |  ||| ||||| |||||||||||||||||| ||||||||    
T  45521127 ttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattc 45521188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 39201660 - 39201598
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||||||||||||||| |||| |||||||||| || ||||||||| ||||||||||    
T  39201660 ttgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattct 39201598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 21180469 - 21180405
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| |||||||||||||  ||||||||||||||||||    
T  21180469 tgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattc 21180405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 38005353 - 38005417
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||||||| |||| ||||||||||||||||||||| || ||||||||    
T  38005353 tgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattc 38005417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 41220598 - 41220650
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  41220598 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattc 41220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 7747228 - 7747289
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||    
T  7747228 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattc 7747289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 18902682 - 18902621
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| |||||||||| ||||||||||||| ||||||||    
T  18902682 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattc 18902621  T

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Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 21286407 - 21286480
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| ||||||||  ||   ||||||||||||||    
T  21286407 agtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgac 21286480  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 41187813 - 41187885
Alignment:
Q  170 gtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttgac 242  Q
    ||||||||||||| |||| ||||||||| ||| ||||||||| |||| ||||| ||  |||||||||||||||    
T  41187813 gtggcaaggagctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgac 41187885  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 331455 - 331516
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||| |||||  ||| |||||||||||||||||||||||| ||||||||    
T  331455 ttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattc 331516  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 8410085 - 8410146
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||| |||||||||||||| ||||| ||| ||||||||    
T  8410085 ttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattc 8410146  T

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Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 37805043 - 37804982
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||| ||||||||||| || || | ||||||||||||| | |||||||||||||||||    
T  37805043 ttgggctacagtggcaaggaactcctcccaaggacgtacccgagaaataccggattcgattc 37804982  T

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Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 22593098 - 22593138
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaatac 209  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  22593098 agtggcaaggagctccttccaaggacgtacccggggaatac 22593138  T

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Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 39807040 - 39806976
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||||||  |||||||||  ||| |||  |||||||||||||||||||||||| ||||||||    
T  39807040 tgtttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattc 39806976  T

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Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 6358306 - 6358243
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  ||||||||| ||||  ||| ||||||||| |||||||||||| |||||||||    
T  6358306 tgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatt 6358243  T

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Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 12864175 - 12864238
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  |||| ||||||||| |||| || ||||||  |||||||||||||||||||||    
T  12864175 tgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatt 12864238  T

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Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 19976962 - 19976899
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  ||||||||| ||||  ||| ||||||||| |||||||||||||| |||||||    
T  19976962 tgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgatt 19976899  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 29422166 - 29422229
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  ||| |||||||||| |||  ||||||||||||||||||||| || |||||||    
T  29422166 tgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatt 29422229  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 29653590 - 29653661
Alignment:
Q  169 agtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaacgcttg 240  Q
    |||||||| || ||||||| |||||||||| | || ||||||||||||||||   || ||||||||||||||    
T  29653590 agtggcaatgaacttcttccaaggacgtactccggaaataccggattcgatttccagggaaaacaacgcttg 29653661  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 34356157 - 34356220
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||  ||||||||||||||  ||| ||||||||| | |||||||||||| |||||||    
T  34356157 tgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatt 34356220  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 10823029 - 10823075
Alignment:
Q  175 aaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||| |||| |||||||||||||||||||||||| || |||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtttgattc 10823075  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 2550822 - 2550883
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||  |||||||||||||| |||  ||||||||| |||||||||| ||| ||||||||    
T  2550822 ttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattc 2550883  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 37560124 - 37560189
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  ||||| ||| |||| |||| ||||||||||||| |||||||| | |||||||||    
T  37560124 tgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattct 37560189  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 7787010 - 7787070
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||  ||||||||||| || |||   ||||||||||||||||||||||| |||||||    
T  7787010 ttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatt 7787070  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 25549681 - 25549757
Alignment:
Q  159 tttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattctaagagaaaacaac 235  Q
    ||||||||  |||||||||||||| |||| ||| |||||   ||||||||| || ||||||||| || |||||||||    
T  25549681 tttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaac 25549757  T

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Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 68471 - 68535
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||| |||| ||| ||||||||    
T  68471 tgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattc 68535  T

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Target: scaffold0332 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 15285 - 15348
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    |||||||||| ||||||||||||||| |||  ||||| |||||||||||||||||| |||||||    
T  15285 tgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggttcgatt 15348  T

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Target: scaffold0209 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 12529 - 12593
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| ||||||||||||||| |||| |||||||||| || | |||||||| ||||||||    
T  12529 tgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattc 12593  T

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Target: scaffold0376 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 12635 - 12688
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||||||||| |||| |||| |||||||| ||||||||||||||| ||||||||    
T  12635 tagtggcaagaagctccttccaaggacgtgcccggggaataccgggttcgattc 12688  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 271226 - 271165
Alignment:
Q  160 ttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    ||||||| | ||||||||||||| |||| |||||||||||||| ||||| ||| ||||||||    
T  271226 ttgggctctggtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattc 271165  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 8151 - 8193
Alignment:
Q  179 agcttcttctaaggacgtacccggggaataccggattcgattc 221  Q
    |||| |||| |||||||||||||||||||||||| ||||||||    
T  8151 agctccttccaaggacgtacccggggaataccgggttcgattc 8193  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 40998 - 41063
Alignment:
Q  157 tgtttgggctatagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgattct 222  Q
    ||||||||||  |||||||||||||| |||| | |||||||| | ||||||| ||| |||||||||    
T  40998 tgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattct 41063  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 5938 - 5990
Alignment:
Q  168 tagtggcaaggagcttcttctaaggacgtacccggggaataccggattcgatt 220  Q
    ||||||||||||||| |||  |||| |||||||||||||||| || |||||||    
T  5938 tagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatt 5990  T

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