View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11835_low_92 (Length: 273)

Name: NF11835_low_92
Description: NF11835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11835_low_92
NF11835_low_92
[»] chr2 (73 HSPs)
chr2 (1-255)||(3423663-3423915)
chr2 (173-255)||(15866733-15866815)
chr2 (170-257)||(11513822-11513906)
chr2 (181-254)||(35459834-35459907)
chr2 (173-245)||(2416246-2416318)
chr2 (175-255)||(9478222-9478302)
chr2 (181-257)||(17952774-17952850)
chr2 (170-245)||(25609729-25609804)
chr2 (176-254)||(3102617-3102695)
chr2 (171-245)||(10143105-10143179)
chr2 (196-245)||(5045245-5045294)
chr2 (170-239)||(13630343-13630412)
chr2 (170-255)||(28803568-28803653)
chr2 (181-237)||(3458598-3458654)
chr2 (171-251)||(3673734-3673814)
chr2 (171-255)||(6926505-6926588)
chr2 (174-254)||(18962104-18962184)
chr2 (170-214)||(31740021-31740065)
chr2 (170-237)||(23143040-23143107)
chr2 (170-237)||(23554830-23554897)
chr2 (190-253)||(31461363-31461426)
chr2 (184-255)||(44606164-44606235)
chr2 (181-239)||(16946981-16947039)
chr2 (181-239)||(17017646-17017704)
chr2 (181-239)||(34339845-34339903)
chr2 (171-241)||(39929804-39929874)
chr2 (170-236)||(43199356-43199422)
chr2 (188-245)||(4026750-4026807)
chr2 (184-257)||(10150676-10150749)
chr2 (198-255)||(15173449-15173506)
chr2 (173-254)||(29430680-29430760)
chr2 (181-254)||(42817449-42817522)
chr2 (175-211)||(43173189-43173225)
chr2 (183-234)||(1939407-1939458)
chr2 (174-245)||(11344350-11344421)
chr2 (170-245)||(35755564-35755639)
chr2 (182-237)||(40837502-40837557)
chr2 (170-216)||(6993786-6993832)
chr2 (187-245)||(7825185-7825243)
chr2 (181-215)||(10646362-10646396)
chr2 (181-255)||(11863723-11863797)
chr2 (176-254)||(14209201-14209279)
chr2 (170-216)||(33942112-33942158)
chr2 (171-257)||(37053515-37053601)
chr2 (170-216)||(37292409-37292455)
chr2 (195-245)||(38239638-38239688)
chr2 (184-254)||(40672872-40672942)
chr2 (173-210)||(1160809-1160846)
chr2 (188-245)||(3611159-3611216)
chr2 (170-255)||(4550700-4550785)
chr2 (187-216)||(6988077-6988106)
chr2 (184-245)||(7282951-7283012)
chr2 (198-251)||(13864577-13864630)
chr2 (184-245)||(15171183-15171244)
chr2 (173-238)||(28039397-28039462)
chr2 (170-239)||(32694151-32694220)
chr2 (174-215)||(33944568-33944609)
chr2 (193-254)||(35252207-35252268)
chr2 (170-255)||(37766721-37766806)
chr2 (170-239)||(39983282-39983350)
chr2 (188-233)||(41407246-41407291)
chr2 (198-255)||(43431534-43431591)
chr2 (181-253)||(43808501-43808573)
chr2 (170-214)||(5043622-5043666)
chr2 (176-248)||(6547840-6547912)
chr2 (173-257)||(13869160-13869244)
chr2 (161-233)||(14666493-14666565)
chr2 (173-233)||(22681250-22681310)
chr2 (187-239)||(23747243-23747295)
chr2 (185-237)||(28933765-28933817)
chr2 (186-257)||(29503161-29503230)
chr2 (199-239)||(44119723-44119763)
chr2 (185-253)||(44458415-44458483)
[»] chr4 (62 HSPs)
chr4 (1-255)||(11917488-11917732)
chr4 (170-255)||(49219062-49219147)
chr4 (170-250)||(4071811-4071890)
chr4 (186-257)||(28581988-28582058)
chr4 (170-245)||(42321941-42322016)
chr4 (174-254)||(30024624-30024704)
chr4 (161-253)||(8422892-8422982)
chr4 (174-245)||(8130107-8130178)
chr4 (170-213)||(13949906-13949949)
chr4 (176-255)||(19422341-19422420)
chr4 (170-257)||(30207633-30207719)
chr4 (174-241)||(44119228-44119295)
chr4 (181-232)||(52735068-52735119)
chr4 (173-256)||(54325102-54325185)
chr4 (168-254)||(41606110-41606196)
chr4 (186-256)||(47970240-47970310)
chr4 (195-245)||(51044546-51044596)
chr4 (195-245)||(55599099-55599149)
chr4 (167-216)||(3549590-3549639)
chr4 (170-227)||(10192235-10192292)
chr4 (170-255)||(24193508-24193593)
chr4 (172-245)||(26883928-26884001)
chr4 (173-234)||(27623579-27623640)
chr4 (181-254)||(36734817-36734890)
chr4 (181-242)||(40865746-40865806)
chr4 (197-254)||(51555956-51556013)
chr4 (170-253)||(32920462-32920543)
chr4 (184-254)||(4191663-4191734)
chr4 (184-251)||(7022595-7022662)
chr4 (161-216)||(18630642-18630697)
chr4 (223-254)||(23819014-23819045)
chr4 (170-257)||(24443959-24444046)
chr4 (181-216)||(32724081-32724116)
chr4 (184-255)||(35743227-35743298)
chr4 (176-219)||(44007940-44007983)
chr4 (173-216)||(46859892-46859935)
chr4 (173-239)||(6364088-6364154)
chr4 (174-240)||(19040181-19040247)
chr4 (181-255)||(22684589-22684663)
chr4 (170-264)||(24929407-24929501)
chr4 (171-245)||(46013363-46013437)
chr4 (171-245)||(46247151-46247225)
chr4 (170-216)||(47119027-47119073)
chr4 (171-209)||(53192416-53192454)
chr4 (176-210)||(55437354-55437388)
chr4 (199-255)||(15511425-15511482)
chr4 (196-248)||(15969833-15969886)
chr4 (174-207)||(24091434-24091467)
chr4 (170-239)||(24160929-24160998)
chr4 (170-215)||(25434522-25434567)
chr4 (174-239)||(45128376-45128441)
chr4 (181-238)||(49803151-49803208)
chr4 (170-239)||(50745939-50746008)
chr4 (173-235)||(53626717-53626781)
chr4 (176-216)||(20936070-20936110)
chr4 (195-239)||(21193937-21193981)
chr4 (173-209)||(21952930-21952966)
chr4 (223-255)||(27321946-27321978)
chr4 (195-243)||(27968072-27968120)
chr4 (181-229)||(29194476-29194524)
chr4 (174-250)||(43372035-43372111)
chr4 (170-226)||(55870403-55870459)
[»] chr8 (48 HSPs)
chr8 (182-254)||(41620365-41620437)
chr8 (173-245)||(4558731-4558803)
chr8 (170-255)||(38561649-38561734)
chr8 (181-254)||(38874570-38874643)
chr8 (173-237)||(1470921-1470985)
chr8 (195-255)||(40728505-40728565)
chr8 (176-255)||(11494076-11494155)
chr8 (188-255)||(14482125-14482192)
chr8 (184-255)||(40357822-40357893)
chr8 (173-235)||(26820142-26820204)
chr8 (181-247)||(29056064-29056130)
chr8 (170-216)||(34770854-34770900)
chr8 (193-254)||(2364558-2364619)
chr8 (181-254)||(7026655-7026728)
chr8 (174-255)||(31884517-31884598)
chr8 (170-254)||(35298539-35298624)
chr8 (170-239)||(42597340-42597409)
chr8 (183-239)||(12224974-12225030)
chr8 (181-213)||(29262947-29262979)
chr8 (181-216)||(2100767-2100802)
chr8 (184-263)||(14949803-14949882)
chr8 (195-254)||(29699178-29699237)
chr8 (170-245)||(29973014-29973089)
chr8 (170-257)||(35869758-35869845)
chr8 (184-255)||(40280281-40280352)
chr8 (174-225)||(42237488-42237539)
chr8 (170-216)||(3537093-3537139)
chr8 (171-245)||(3945207-3945281)
chr8 (181-259)||(11415073-11415151)
chr8 (173-239)||(12361131-12361197)
chr8 (181-239)||(26215435-26215493)
chr8 (181-215)||(27728094-27728128)
chr8 (188-254)||(31315533-31315598)
chr8 (184-254)||(34563174-34563244)
chr8 (181-239)||(41336718-41336776)
chr8 (173-246)||(1112785-1112858)
chr8 (200-257)||(10939328-10939385)
chr8 (170-255)||(11056729-11056814)
chr8 (173-237)||(31705025-31705090)
chr8 (173-254)||(33209285-33209366)
chr8 (174-255)||(34788493-34788574)
chr8 (174-254)||(787172-787252)
chr8 (181-253)||(2699231-2699303)
chr8 (173-209)||(7878551-7878587)
chr8 (199-243)||(10062218-10062262)
chr8 (167-211)||(11376670-11376714)
chr8 (174-214)||(35374439-35374479)
chr8 (195-255)||(39392748-39392808)
[»] chr3 (64 HSPs)
chr3 (170-253)||(37788786-37788868)
chr3 (182-257)||(38462202-38462277)
chr3 (181-256)||(33307653-33307728)
chr3 (176-238)||(1395611-1395673)
chr3 (184-254)||(16790432-16790502)
chr3 (170-236)||(29771751-29771817)
chr3 (172-254)||(43116492-43116574)
chr3 (187-257)||(49772747-49772817)
chr3 (188-264)||(39971233-39971309)
chr3 (184-255)||(3182438-3182509)
chr3 (170-257)||(22214743-22214830)
chr3 (184-255)||(44374720-44374791)
chr3 (170-237)||(48397587-48397654)
chr3 (181-255)||(20349549-20349623)
chr3 (170-216)||(32555043-32555089)
chr3 (176-245)||(36783402-36783472)
chr3 (184-245)||(3757981-3758042)
chr3 (181-242)||(4990630-4990691)
chr3 (173-245)||(20192671-20192743)
chr3 (174-254)||(32703062-32703142)
chr3 (174-233)||(37689450-37689509)
chr3 (170-236)||(24235745-24235811)
chr3 (195-245)||(24605103-24605153)
chr3 (185-239)||(48364956-48365010)
chr3 (170-257)||(23530246-23530335)
chr3 (183-216)||(25195386-25195419)
chr3 (181-254)||(27792796-27792869)
chr3 (170-255)||(28779279-28779364)
chr3 (181-246)||(53736186-53736251)
chr3 (181-254)||(54775052-54775125)
chr3 (170-214)||(2865721-2865765)
chr3 (201-245)||(8142803-8142847)
chr3 (181-233)||(10101549-10101601)
chr3 (181-233)||(10212474-10212526)
chr3 (174-242)||(30669036-30669104)
chr3 (181-253)||(36646455-36646527)
chr3 (174-245)||(21574425-21574495)
chr3 (183-254)||(32663566-32663636)
chr3 (195-241)||(36283659-36283703)
chr3 (196-255)||(41028939-41028998)
chr3 (181-255)||(22232749-22232823)
chr3 (175-257)||(25129752-25129833)
chr3 (182-216)||(26990696-26990730)
chr3 (176-234)||(49586984-49587042)
chr3 (184-254)||(53457301-53457371)
chr3 (188-241)||(2128331-2128384)
chr3 (170-211)||(3467450-3467491)
chr3 (201-254)||(16790181-16790234)
chr3 (182-254)||(24268228-24268301)
chr3 (173-253)||(25183053-25183134)
chr3 (171-216)||(26599140-26599185)
chr3 (188-257)||(32064361-32064430)
chr3 (188-237)||(33882969-33883018)
chr3 (170-255)||(36101491-36101576)
chr3 (170-239)||(40122815-40122883)
chr3 (196-245)||(49546575-49546624)
chr3 (184-245)||(52413197-52413258)
chr3 (181-253)||(905043-905115)
chr3 (174-250)||(8007761-8007837)
chr3 (181-233)||(10357378-10357430)
chr3 (181-233)||(15304420-15304472)
chr3 (173-213)||(23315591-23315631)
chr3 (197-245)||(42039092-42039140)
chr3 (181-237)||(42809242-42809298)
[»] chr5 (51 HSPs)
chr5 (171-255)||(35135725-35135809)
chr5 (170-256)||(36539668-36539754)
chr5 (184-252)||(7096203-7096271)
chr5 (170-245)||(9927518-9927593)
chr5 (173-256)||(32059654-32059736)
chr5 (181-254)||(4991016-4991089)
chr5 (182-239)||(38047929-38047986)
chr5 (181-245)||(9202821-9202885)
chr5 (196-243)||(5284762-5284809)
chr5 (167-244)||(34117595-34117669)
chr5 (170-255)||(912710-912796)
chr5 (170-252)||(18704098-18704179)
chr5 (181-239)||(37063147-37063205)
chr5 (161-227)||(42181145-42181211)
chr5 (181-254)||(6733966-6734038)
chr5 (173-238)||(36796771-36796836)
chr5 (173-245)||(10907312-10907384)
chr5 (199-255)||(12407752-12407807)
chr5 (176-216)||(32969185-32969225)
chr5 (170-254)||(35960338-35960421)
chr5 (195-242)||(1636844-1636891)
chr5 (181-216)||(8158374-8158409)
chr5 (170-233)||(9703302-9703365)
chr5 (177-216)||(10303763-10303802)
chr5 (202-257)||(10391274-10391329)
chr5 (173-216)||(14295468-14295511)
chr5 (187-254)||(17756808-17756875)
chr5 (196-255)||(20982223-20982282)
chr5 (176-239)||(29116998-29117061)
chr5 (173-216)||(35550911-35550953)
chr5 (181-216)||(39750105-39750140)
chr5 (171-213)||(583836-583878)
chr5 (170-215)||(3952061-3952104)
chr5 (187-245)||(11835210-11835268)
chr5 (173-255)||(32172576-32172658)
chr5 (170-216)||(39823183-39823229)
chr5 (187-245)||(40048359-40048417)
chr5 (170-239)||(4855637-4855706)
chr5 (170-215)||(10272493-10272538)
chr5 (193-234)||(11615452-11615493)
chr5 (201-254)||(13224353-13224406)
chr5 (188-245)||(14932223-14932280)
chr5 (170-211)||(34205206-34205247)
chr5 (206-255)||(38033891-38033940)
chr5 (174-239)||(39128578-39128643)
chr5 (185-257)||(6738484-6738556)
chr5 (176-216)||(12595808-12595848)
chr5 (201-245)||(17498668-17498712)
chr5 (170-254)||(19177403-19177487)
chr5 (193-245)||(21782654-21782706)
chr5 (181-253)||(28586839-28586911)
[»] chr1 (60 HSPs)
chr1 (175-257)||(4200150-4200232)
chr1 (170-246)||(15360826-15360902)
chr1 (170-256)||(28467369-28467457)
chr1 (172-255)||(45990122-45990205)
chr1 (173-242)||(49517006-49517075)
chr1 (174-254)||(44032065-44032145)
chr1 (174-242)||(48830142-48830210)
chr1 (184-255)||(7274015-7274086)
chr1 (181-255)||(870968-871042)
chr1 (193-250)||(289168-289225)
chr1 (170-251)||(17269177-17269258)
chr1 (170-239)||(29007778-29007847)
chr1 (170-259)||(49557060-49557149)
chr1 (176-243)||(29793991-29794057)
chr1 (174-216)||(27738246-27738288)
chr1 (170-216)||(30371110-30371156)
chr1 (188-254)||(33339500-33339566)
chr1 (174-243)||(4256108-4256177)
chr1 (170-215)||(7218136-7218181)
chr1 (174-231)||(44936656-44936713)
chr1 (181-254)||(46980202-46980275)
chr1 (181-245)||(1232965-1233029)
chr1 (189-245)||(1730825-1730881)
chr1 (176-216)||(10439648-10439688)
chr1 (181-245)||(11560622-11560686)
chr1 (184-232)||(14737781-14737829)
chr1 (173-213)||(15361678-15361718)
chr1 (199-255)||(16982027-16982083)
chr1 (161-213)||(29723454-29723506)
chr1 (191-239)||(36641814-36641862)
chr1 (175-239)||(50998491-50998555)
chr1 (176-239)||(4215311-4215374)
chr1 (184-259)||(6933037-6933112)
chr1 (173-216)||(9656612-9656655)
chr1 (170-209)||(25006096-25006135)
chr1 (181-240)||(36151578-36151637)
chr1 (181-244)||(42336596-42336659)
chr1 (184-215)||(45234160-45234191)
chr1 (173-216)||(47877084-47877127)
chr1 (184-239)||(50319231-50319286)
chr1 (170-216)||(5421982-5422028)
chr1 (170-215)||(5592747-5592792)
chr1 (181-234)||(11211062-11211115)
chr1 (201-254)||(11218175-11218228)
chr1 (174-239)||(17420142-17420207)
chr1 (182-255)||(23895259-23895332)
chr1 (185-254)||(36602714-36602783)
chr1 (174-239)||(43372025-43372090)
chr1 (170-215)||(45205031-45205076)
chr1 (174-255)||(52286601-52286682)
chr1 (195-255)||(10854656-10854716)
chr1 (181-245)||(27140418-27140482)
chr1 (173-257)||(30259552-30259636)
chr1 (177-245)||(37818397-37818465)
chr1 (182-234)||(38867907-38867959)
chr1 (176-216)||(41516148-41516188)
chr1 (197-257)||(41638399-41638459)
chr1 (181-253)||(45107548-45107619)
chr1 (188-256)||(46499934-46500002)
chr1 (181-237)||(52559901-52559957)
[»] scaffold0024 (2 HSPs)
scaffold0024 (170-255)||(27499-27584)
scaffold0024 (181-239)||(21351-21409)
[»] chr7 (71 HSPs)
chr7 (184-241)||(8680929-8680986)
chr7 (171-255)||(49060463-49060547)
chr7 (170-239)||(45813242-45813311)
chr7 (182-254)||(30751441-30751513)
chr7 (170-241)||(1417201-1417272)
chr7 (170-257)||(9527152-9527239)
chr7 (170-245)||(30496637-30496712)
chr7 (174-244)||(23918891-23918961)
chr7 (195-245)||(39505890-39505940)
chr7 (181-234)||(39591540-39591593)
chr7 (170-255)||(44241783-44241867)
chr7 (181-254)||(45593792-45593865)
chr7 (170-254)||(5010530-5010614)
chr7 (181-245)||(30133982-30134046)
chr7 (174-245)||(28165024-28165095)
chr7 (173-216)||(31002723-31002766)
chr7 (173-216)||(40689051-40689094)
chr7 (195-245)||(5939017-5939067)
chr7 (184-254)||(7244626-7244696)
chr7 (173-254)||(7453462-7453544)
chr7 (181-239)||(35536046-35536104)
chr7 (181-254)||(991994-992067)
chr7 (170-239)||(3501028-3501097)
chr7 (181-254)||(22759110-22759183)
chr7 (173-254)||(47004011-47004092)
chr7 (176-239)||(1432032-1432098)
chr7 (183-255)||(2223071-2223143)
chr7 (171-255)||(25511550-25511634)
chr7 (172-216)||(30456514-30456558)
chr7 (189-233)||(41875864-41875908)
chr7 (161-241)||(48157173-48157253)
chr7 (173-216)||(12835002-12835045)
chr7 (174-213)||(22296294-22296333)
chr7 (161-204)||(24895330-24895373)
chr7 (171-254)||(27481357-27481440)
chr7 (181-247)||(5272893-5272959)
chr7 (195-245)||(5276157-5276207)
chr7 (170-204)||(24909638-24909672)
chr7 (182-252)||(24973870-24973940)
chr7 (181-239)||(27121659-27121717)
chr7 (186-239)||(31149586-31149640)
chr7 (186-239)||(31167878-31167932)
chr7 (195-245)||(35808991-35809041)
chr7 (186-240)||(36532289-36532343)
chr7 (175-253)||(38496583-38496659)
chr7 (170-216)||(45777233-45777279)
chr7 (181-215)||(46825061-46825095)
chr7 (194-255)||(1431394-1431455)
chr7 (187-216)||(3635927-3635956)
chr7 (181-238)||(5006582-5006639)
chr7 (170-255)||(5373148-5373233)
chr7 (181-238)||(7623078-7623135)
chr7 (189-254)||(8445210-8445275)
chr7 (173-254)||(27548187-27548268)
chr7 (181-242)||(27626197-27626258)
chr7 (184-237)||(28178910-28178963)
chr7 (170-239)||(28613596-28613665)
chr7 (174-255)||(39551614-39551695)
chr7 (174-215)||(40428518-40428559)
chr7 (182-238)||(1373614-1373670)
chr7 (189-245)||(5269463-5269519)
chr7 (201-245)||(14823938-14823982)
chr7 (201-245)||(15270945-15270989)
chr7 (193-249)||(20476595-20476651)
chr7 (209-245)||(25507284-25507320)
chr7 (209-245)||(25558290-25558326)
chr7 (209-245)||(25558488-25558524)
chr7 (195-239)||(31341133-31341177)
chr7 (181-245)||(33894556-33894619)
chr7 (173-233)||(38010659-38010719)
chr7 (173-213)||(39908059-39908099)
[»] chr6 (50 HSPs)
chr6 (181-254)||(3217263-3217336)
chr6 (171-245)||(24836262-24836336)
chr6 (174-255)||(29274295-29274376)
chr6 (173-232)||(2027471-2027530)
chr6 (195-251)||(32975905-32975961)
chr6 (170-253)||(10452422-10452505)
chr6 (181-257)||(8349737-8349813)
chr6 (171-215)||(27595630-27595674)
chr6 (170-245)||(4006647-4006722)
chr6 (173-256)||(10032493-10032576)
chr6 (174-232)||(7785808-7785866)
chr6 (173-239)||(22742305-22742371)
chr6 (181-254)||(5328898-5328971)
chr6 (194-255)||(28531627-28531688)
chr6 (176-236)||(2206532-2206592)
chr6 (171-255)||(2514625-2514709)
chr6 (181-253)||(7713950-7714022)
chr6 (170-250)||(11340687-11340767)
chr6 (181-245)||(20671938-20672002)
chr6 (174-254)||(21959652-21959732)
chr6 (181-213)||(27693512-27693544)
chr6 (182-257)||(28660160-28660236)
chr6 (173-216)||(281913-281956)
chr6 (183-257)||(1497901-1497976)
chr6 (173-255)||(10400192-10400274)
chr6 (181-216)||(27713469-27713504)
chr6 (195-234)||(27857319-27857358)
chr6 (181-244)||(32513759-32513821)
chr6 (174-216)||(1402958-1403000)
chr6 (170-216)||(2117365-2117411)
chr6 (181-251)||(7354131-7354201)
chr6 (173-239)||(9093621-9093687)
chr6 (181-215)||(10749301-10749335)
chr6 (181-239)||(24476541-24476599)
chr6 (181-227)||(28660833-28660879)
chr6 (184-254)||(31672544-31672614)
chr6 (170-244)||(34429752-34429826)
chr6 (204-257)||(2023725-2023778)
chr6 (181-210)||(2732312-2732341)
chr6 (173-254)||(3155100-3155181)
chr6 (181-254)||(4325381-4325454)
chr6 (204-253)||(5554861-5554910)
chr6 (170-215)||(11363430-11363475)
chr6 (195-235)||(2027891-2027931)
chr6 (181-249)||(2034512-2034579)
chr6 (195-255)||(8420284-8420344)
chr6 (187-239)||(9559620-9559672)
chr6 (185-249)||(29940725-29940789)
chr6 (205-245)||(33116538-33116578)
chr6 (188-256)||(34405027-34405095)
[»] scaffold0590 (1 HSPs)
scaffold0590 (181-253)||(1147-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (181-253)||(2756-2828)
[»] scaffold0103 (1 HSPs)
scaffold0103 (174-238)||(51508-51572)
[»] scaffold0015 (1 HSPs)
scaffold0015 (181-219)||(69016-69054)
[»] scaffold0085 (1 HSPs)
scaffold0085 (174-215)||(34063-34104)
[»] scaffold0549 (2 HSPs)
scaffold0549 (170-250)||(1786-1866)
scaffold0549 (170-250)||(3876-3956)
[»] scaffold0349 (1 HSPs)
scaffold0349 (181-216)||(18440-18475)
[»] scaffold0508 (1 HSPs)
scaffold0508 (181-255)||(9848-9922)
[»] scaffold0654 (1 HSPs)
scaffold0654 (184-257)||(6713-6786)
[»] scaffold0287 (1 HSPs)
scaffold0287 (187-216)||(10129-10158)
[»] scaffold0221 (1 HSPs)
scaffold0221 (181-238)||(20235-20292)
[»] scaffold0153 (2 HSPs)
scaffold0153 (173-210)||(6563-6600)
scaffold0153 (173-210)||(13583-13620)
[»] scaffold0060 (1 HSPs)
scaffold0060 (189-254)||(63366-63431)
[»] scaffold0014 (1 HSPs)
scaffold0014 (184-257)||(116632-116705)


Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 3423663 - 3423915
Alignment:
Q  1 aaggtatgctcatatacttttcatttgtattttaaagtcttatttgatctaatccacgggtacaaacggtgatgaccctaagcacgggtgttaggggcga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| |||||||    
T  3423663 aaggtatgctcatatacttttcatttgtattttaaagtcttatttgatctaatctaccggtacaaacggtgatgaccctaagcgcgggtgtttggggcga 3423762  T
Q  101 ctcatagcaccaatannnnnnnnatcaatagtatgtatatatatttagacgagaaccaatttgtgtaagcaacttataggttatatgaaaataatttgac 200  Q
    |||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423763 ctcatagcaccaatatttttt--atcaatagtatgtatatatatttagacgagaaccaatttgtgtaagcaacttataggttatatgaaaataatttgac 3423860  T
Q  201 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423861 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 3423915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 15866733 - 15866815
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||| ||||||||||| || | ||||||||||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  15866733 cttatagcttatatgaaaacaagtcgactttattttacattttgttacaaaaataacttatacacaaacacttgtatgataag 15866815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 11513906 - 11513822
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| |     |||||||||||||||||| ||| |||||||||||    
T  11513906 caacttatagcttatatgaaaacaatttgactttattttatcttttgtt---gtaataacttatacataaacccttatatgataagtg 11513822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 35459907 - 35459834
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||| ||||| ||||||||||||||||||||||||||| | ||||| |||||||| || ||||| ||||||||    
T  35459907 ttatacgaaaacaatttgactttattttatcttttggtatacaaatagcttatacaaaatcacttatatgataa 35459834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 2416318 - 2416246
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||| |||||| |||| ||||| |||| ||||||||||||| |||| ||||||||||||||||| |||||    
T  2416318 cttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataagcactt 2416246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 9478302 - 9478222
Alignment:
Q  175 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||| ||||||||||||| ||||| ||||||||||||  || || | ||||| ||||||||||||||||| |||||||||    
T  9478302 tatagcttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttatatgataag 9478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 17952774 - 17952850
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||||||| |||||||||||||||||||||| || | ||||| |||||| |||| | ||| |||||||||||    
T  17952774 ttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtg 17952850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 25609804 - 25609729
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||  || | ||||| ||||||||||| |||||    
T  25609804 caacttatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcactt 25609729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 3102695 - 3102617
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||| |||||| |||||| |||||||||||||||| ||||| || ||||||| ||||||||||| || || ||||||||    
T  3102695 atagattatataaaaatagtttgactttattttatattttgctataaaaatagcttatacataagcagttatatgataa 3102617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 10143179 - 10143105
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||| |||||| |||| | |||||||| ||||||||||||| || | ||||||||||||||||| |||||    
T  10143179 aacttatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcactt 10143105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 5045245 - 5045294
Alignment:
Q  196 ttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  5045245 ttgactttattttatcttttgttataaaaatagcttatacataaacactt 5045294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 13630343 - 13630412
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||| | ||||||||||| | ||||||||||| |||||||||| || | |||||||||||||||||    
T  13630343 caacttattgattatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataa 13630412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 28803568 - 28803653
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||| ||| ||||||||||  | |||||||||||||||||||||| ||   |||||||||||| |||| ||||| |||||||||    
T  28803568 caacttgtagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgataag 28803653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 3458654 - 3458598
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||||||||| | |||||||||||||||||||||| || |||||||||||| ||||    
T  3458654 ttatatgaaaaaagtttgactttattttatcttttgttataaaaataacttagacat 3458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 3673814 - 3673734
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 251  Q
    ||||||||  ||||||||||| ||||| |||||||||||| ||||| || | |||||||| |||||||| ||||| |||||    
T  3673814 aacttataacttatatgaaaacaatttaactttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 6926505 - 6926588
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||  |  | |||| ||||||||||||||| || |||||||||    
T  6926505 aacttatagtttatatgaaaacaatttgac-ttattttatcttttcttgtacaaatgacttatacataaacatttatatgataag 6926588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 18962104 - 18962184
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| ||||||||||| | ||| |||||||||||||||||| || ||||||| || |||||||| |||||  |||||||    
T  18962104 ttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcacttacatgataa 18962184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 31740021 - 31740065
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttt 214  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  31740021 caacttatagcttatatgaaaatagtttgactttattttatcttt 31740065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 23143040 - 23143107
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||| |||| ||||| ||||| ||||||| || ||||||||||||| |||||||||| |||||||||    
T  23143040 caactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 23554830 - 23554897
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||| |||| ||||| ||||| ||||||| || ||||||||||||| |||||||||| |||||||||    
T  23554830 caactaatagcttataagaaaacaatttgatttgattttatcttttgttacaaaaatagcttatacat 23554897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 31461426 - 31461363
Alignment:
Q  190 aataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||||||||||||||||||| || | ||||| |||||| |||| ||||| |||||||    
T  31461426 aataatttgactttattttatcttttgttatagaaatagcttatatataaccacttatatgata 31461363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 44606164 - 44606235
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| |||| | ||||||||||||||||| ||  |||||| ||||||||||||||||| ||| |||||    
T  44606164 tatgaaaacaattggtctttattttatcttttgttatgaaaatagcttatacataaacacttatataataag 44606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 16947039 - 16946981
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||| |||||||||||||||||||||| |||||||  |||| ||||| |||||||||||    
T  16947039 ttatgtgaaaataatttgactttatttaatcttttcttacacaaatagcttatacataa 16946981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 17017704 - 17017646
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||| |||||||||||||||||||||| |||||||  |||| ||||| |||||||||||    
T  17017704 ttatgtgaaaataatttgactttatttaatcttttcttacacaaatagcttatacataa 17017646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 34339903 - 34339845
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||| |||||| ||||||    
T  34339903 ttatacgaaaataatttgactttattttatcttttgttttaaaaacaacttacacataa 34339845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 39929874 - 39929804
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    ||||||||| |||||| |||| ||||||| || ||||||||||||| || || ||||||||||| ||||||    
T  39929874 aacttatagcttatataaaaacaatttgatttgattttatcttttgttataacaataacttataaataaac 39929804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 43199422 - 43199356
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 236  Q
    |||||||||| ||||| ||| ||||||| |||||||||||||||||| |  | ||||||||||||||    
T  43199422 caacttatagcttatacgaagataatttaactttattttatcttttgttgtagaaataacttataca 43199356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 4026807 - 4026750
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||| |||||||||||||||||| || ||||||| |||||| |||| |||||    
T  4026807 aaaataatttaactttattttatcttttgctataaaaatagcttatagataagcactt 4026750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 10150749 - 10150676
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||  |||| || ||||||||||||||  || | ||||||||||||||||||||||| ||| |||||||    
T  10150749 tatgaaaaccatttaacgttattttatcttttattatagaaataacttatacataaacacttatataataagtg 10150676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 15173506 - 15173449
Alignment:
Q  198 gactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| |||||||| || | |||||||||||||||| ||||||||| ||||||    
T  15173506 gactttatttcatcttttgttatagaaataacttatacatagacacttgtacgataag 15173449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 29430760 - 29430680
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||| ||||| ||||| | ||||||||||||| | |||||| || | ||||| ||||||||||||| ||||||||||||    
T  29430760 cttatagcttataagaaaacagtttgactttatttaa-cttttgttatagaaatagcttatacataaacccttgtatgataa 29430680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 42817449 - 42817522
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| |  ||||||| |||||||||||||||| | ||||||| |||| || ||||||| ||||||||    
T  42817449 ttatatgaaaacagcttgacttcattttatcttttggtatagaaataacatataaatcaacacttatatgataa 42817522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 43173225 - 43173189
Alignment:
Q  175 tataggttatatgaaaataatttgactttattttatc 211  Q
    ||||| |||||||||||||||||||||||||||||||    
T  43173225 tatagcttatatgaaaataatttgactttattttatc 43173189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 1939407 - 1939458
Alignment:
Q  183 atatgaaaataatttgactttattttatcttttggtacaaaaataacttata 234  Q
    ||||||||||| ||| |||||||||||||||||| || | ||||||||||||    
T  1939407 atatgaaaatagtttcactttattttatcttttgttatagaaataacttata 1939458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 11344350 - 11344421
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||| || |||||||| ||||||||||| |||||||||||| || | ||||| ||||| ||||| |||||    
T  11344350 ttatagcttgtatgaaaacaatttgactttcttttatcttttgttatagaaatatcttatgcataagcactt 11344421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 35755564 - 35755639
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||| ||| ||||||| |||||||||||||||| | |||   || | ||||| |||||||||||||||||    
T  35755564 caacttatagcttacatgaaaacaatttgactttattttctatttgattatagaaatagcttatacataaacactt 35755639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 40837502 - 40837557
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    |||||||||| |||||||||||| ||||||||||| || | ||||| |||||||||    
T  40837502 tatatgaaaacaatttgactttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 6993786 - 6993832
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| ||||| ||||||||| |||||||||| |||||||||||||||    
T  6993786 caacctatagcttatatgaatataatttgaccttattttatcttttg 6993832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 7825243 - 7825185
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||| ||||| |||||| ||||||||||| || ||||||| |||||||| ||||||||    
T  7825243 gaaaaaaatttaactttactttatcttttgttataaaaatagcttatacagaaacactt 7825185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 10646362 - 10646396
Alignment:
Q  181 ttatatgaaaataatttgactttattttatctttt 215  Q
    ||||| |||||||||||||||||||||||||||||    
T  10646362 ttataggaaaataatttgactttattttatctttt 10646396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 11863723 - 11863797
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||| ||||| ||| |||||||||||||| |  |||| ||||| |||||||| ||||| ||| |||||    
T  11863723 ttatatgaaaacaatttaactctattttatcttttgctgtaaaactaactcatacataaccacttatataataag 11863797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 14209279 - 14209201
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||| ||||||||||| | ||||| |||||||||||||||| ||   ||||| |||| ||| |||||||| ||||||||    
T  14209279 atagcttatatgaaaacagtttgaatttattttatcttttgttattgaaatagcttagacagaaacacttatatgataa 14209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 33942158 - 33942112
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  33942158 caacttatagcttacatgaaaacagtttgactttattttatcttttg 33942112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 37053601 - 37053515
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||  ||||||||||| | |||||||||||||||| || || || | |||||   ||||||||| ||||| |||||||||||    
T  37053601 aacttataacttatatgaaaacagtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataagtg 37053515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 37292409 - 37292455
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||| |||| ||||||||||||| ||| ||||||||||||||||||    
T  37292409 caactaatagcttatatgaaaatagttttactttattttatcttttg 37292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 38239638 - 38239688
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||| ||||||||||||| || | ||||| |||||||||||||||||    
T  38239638 tttgacttgattttatcttttgttatagaaatagcttatacataaacactt 38239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 40672872 - 40672942
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| ||| |||||||||||||||||||   | | |||||||||||||||||| ||||  |||||||    
T  40672872 tatgaaaacaatgtgactttattttatcttttttcatagaaataacttatacataaaaacttaaatgataa 40672942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 1160809 - 1160846
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttat 210  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  1160809 cttatagcttatatgaaaatagtttgactttattttat 1160846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 3611216 - 3611159
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||| ||||| ||||||||||| |||||| || | ||||||||||||||||| |||||    
T  3611216 aaaacaatttaactttattttaccttttgctatagaaataacttatacataagcactt 3611159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 4550785 - 4550700
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| ||||||||||| |  ||||| ||||||||||||||  ||   ||| ||||||||||||| ||||| | |||||||    
T  4550785 caacttatagtttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatgtgataag 4550700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 6988106 - 6988077
Alignment:
Q  187 gaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||||||||||||||||||||    
T  6988106 gaaaataatttgactttattttatcttttg 6988077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 7283012 - 7282951
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||| | |||||||| ||||| ||||||  || ||||||| |||||||||||||||||    
T  7283012 tatgaaaacagtttgacttcattttttcttttcttataaaaatagcttatacataaacactt 7282951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 13864630 - 13864577
Alignment:
Q  198 gactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 251  Q
    |||||||||||| |||||| || | ||||| ||||||||||||||||| |||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacacttatatga 13864577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 15171244 - 15171183
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||| | |||||||||| |||||||| || || | ||| |||||||||||||||||||    
T  15171244 tatgaaaacattttgactttaatttatcttctgttatagaaaaaacttatacataaacactt 15171183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 28039397 - 28039462
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    ||||||| ||||||||||| |||| |||||||||||||||| ||  || |||||| ||||| ||||    
T  28039397 cttatagtttatatgaaaacaattggactttattttatcttgtgtaaccaaaatagcttattcata 28039462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 32694220 - 32694151
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||  |||||| |||||| | ||| |||||||||||||||| || | ||||| |||||||||||    
T  32694220 caacttataaattatataaaaatagtctgattttattttatcttttgatatagaaatagcttatacataa 32694151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 33944609 - 33944568
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||| ||||||||||| |||||||||||||||||| ||||    
T  33944609 ttatagcttatatgaaaacaatttgactttattttatatttt 33944568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 35252207 - 35252268
Alignment:
Q  193 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||||||||||  || |  |||||| |||||||||||| || ||||||||    
T  35252207 aatttgactttattttatcttttattaaaggaataacatatacataaacatttatatgataa 35252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 37766806 - 37766721
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| ||||| ||||| | |||||||||||||||| |||||  | |  |||| || |||||||| ||||| |||||||||    
T  37766806 caacttatagtttatacgaaaacattttgactttattttattttttgtcatatgaatagctaatacataagcacttatatgataag 37766721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 39983350 - 39983282
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||| |||||||||||| |||| | ||||||||| | |||| |||||||||| |||||| ||||    
T  39983350 caacttatagcttatatgaaaattattttattttatttta-cctttgttacaaaaatagcttatatataa 39983282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 41407291 - 41407246
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    |||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  41407291 aaaacaatttaactttattttatcttttggtacagaaatagcttat 41407246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 43431534 - 43431591
Alignment:
Q  198 gactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||| ||||||||||| ||   ||||||||||||||| ||||||| |||||||||    
T  43431534 gactttactttatcttttgttattgaaataacttatacattaacacttatatgataag 43431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 43808573 - 43808501
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggta-caaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||||| ||| ||||||||||||  |||| ||  ||||||| ||||||||||||||||| |||||||    
T  43808573 ttatatgaaaatagtttaactttattttat-gtttgttataaaaaatagcttatacataaacacttatatgata 43808501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 5043622 - 5043666
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttt 214  Q
    |||||| ||| ||||||||||| | ||||||||||||||||||||    
T  5043622 caacttctagcttatatgaaaacagtttgactttattttatcttt 5043666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 6547912 - 6547840
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgta 248  Q
    |||| |||||| |||||| ||||||||| ||||  |||||| || | ||||||||||||||  ||||||||||    
T  6547912 atagcttatataaaaatattttgactttgttttgacttttgctatagaaataacttatacacgaacacttgta 6547840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 13869160 - 13869244
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||| ||| ||||||||||||||| | | |||||||| |||  | | ||||| ||||| |||||| |||| |||||||||||    
T  13869160 cttatagcttagatgaaaataatttgaatgtcttttatctcttgtcatagaaatagcttatgcataaatacttctatgataagtg 13869244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 14666565 - 14666493
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||| || |||||||||  ||||||||||  | |||||||||||||||||||||| ||  |||| |||||||    
T  14666565 ttgtgaaaacaacttataacttatatgaaatcagtttgactttattttatcttttgttatcaaaacaacttat 14666493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 22681250 - 22681310
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |  |||||||| ||||    
T  22681250 cttatagcttatatgaaaacaatttggctttgttttatcttttgttttaaaaataatttat 22681310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 23747295 - 23747243
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||| | || ||||||||||||| || ||||||| |||||||||||    
T  23747295 gaaaataatttaaattcattttatcttttgatataaaaatagcttatacataa 23747243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 28933817 - 28933765
Alignment:
Q  185 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||||||||||||| || ||||||||||||| || | ||||| |||||||||    
T  28933817 atgaaaataatttgatttgattttatcttttgttatataaatagcttatacat 28933765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 29503161 - 29503230
Alignment:
Q  186 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||| |||||||||||||||||  ||| || | ||||| | ||||||||||||||| ||| |||||||    
T  29503161 tgaaaatagtttgactttattttatc--ttgttatagaaatatcatatacataaacacttctataataagtg 29503230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 44119763 - 44119723
Alignment:
Q  199 actttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||||||||||  || |||||||||||||||||||    
T  44119763 actttattttatcttttactataaaaataacttatacataa 44119723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 44458415 - 44458483
Alignment:
Q  185 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    |||||||||  ||||||||| ||||||| ||| |  ||||||| |||||||||||| |||| |||||||    
T  44458415 atgaaaatagcttgactttagtttatctgttgttgaaaaaatagcttatacataaatacttatatgata 44458483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 11917732 - 11917488
Alignment:
Q  1 aaggtatgctcatatacttttcatttgtattttaaagtcttatttgatctaatccacgggtacaaacggtgatgaccctaagcacgggtgttaggggcga 100  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||||||  | ||| || ||||||||  ||||||||||||||| | |||| |||||||||    
T  11917732 aaggtaggctcatatacttt-catttgtgttttaaaggcttatttgaatttatctactggtacaaaaagtgatgaccctaagcgcaggtggtaggggcga 11917634  T
Q  101 ctcatagcaccaatannnnnnnnatcaatagtatgtatatatatttagacgagaaccaatttgtgtaagcaacttataggttatatgaaaataatttgac 200  Q
     |||||||  |||||         | ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11917633 atcatagcggcaatatttttt---ttaatagtatgtataaatatttagacgagaaccaatttttgtaagcaacttataggttatatgaaaataatttgac 11917537  T
Q  201 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||| ||||||||||      ||||||||||||||||||||||    
T  11917536 tttattttatcttttgttacaaaaata------acataaacacttgtatgataag 11917488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 49219147 - 49219062
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||| || | ||||||||||||| ||| ||||  |||||||||    
T  49219147 caacttatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatacctaaccactcatatgataag 49219062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 4071890 - 4071811
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || | |||| | ||||| |||||||||| ||||    
T  4071890 caacttatagcttatatgaaaataatttgactttattttatcttttgttatagaaat-agttatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 28581988 - 28582058
Alignment:
Q  186 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||| |||||||||||||||||||||| || |||||||  |||||||||||||||| |||||||||||    
T  28581988 tgaaaatagtttgactttattttatcttttgcta-aaaaatagtttatacataaacacttctatgataagtg 28582058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 42321941 - 42322016
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||  ||||||||||| ||||||||||||||||||| |||| || ||||||| ||||| |||||||||||    
T  42321941 caacttataatttatatgaaaacaatttgactttattttatcatttgttataaaaatagcttattcataaacactt 42322016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 30024704 - 30024624
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| ||||||||||| ||||| |||||||||||||||||| || | ||||||||||| |||||  |||| ||||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttatatgataa 30024624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 8422892 - 8422982
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||| || |||||||||| ||||||||||| |||  ||||||||||||||||||  || ||||||| ||||||||||| ||| | |||||||    
T  8422892 ttgtgaaaacaacttatagcttatatgaaaacaat--gactttattttatctttttttataaaaatagcttatacataagcacatatatgata 8422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 8130178 - 8130107
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||| ||||||||||||||||||||||||| |||||||||| || | ||| |||| |||| ||| |||||    
T  8130178 ttatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcactt 8130107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 13949906 - 13949949
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctt 213  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  13949906 caacttatagcttatatgaaaacaatttgactttattttatctt 13949949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 19422420 - 19422341
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||| |||||||||||   |||||||||||| ||||||||| || | ||||||||||||||||| || || |||||||||    
T  19422420 atagtttatatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttatatgataag 19422341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 30207633 - 30207719
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||| ||||||||||| | ||||| |||||||||| ||||| || | || |||| ||||||||| ||||| |||||||||||    
T  30207633 caacttatagcttatatgaaaacagtttga-tttattttattttttgttatagaactaacatatacataagcacttatatgataagtg 30207719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 44119228 - 44119295
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    |||||| ||||||||||| |  |||||||| |||||||||||| || | |||||||||||||||||||    
T  44119228 ttatagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataaac 44119295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 52735119 - 52735068
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataactta 232  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||| ||||    
T  52735119 ttatatgaaagtaatttgactttattttatcttttgttacagaaatagctta 52735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 54325102 - 54325185
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||  | | |||||  ||||||| || ||||| ||||||||||    
T  54325102 cttatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttatatgataagt 54325185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 41606196 - 41606110
Alignment:
Q  168 agcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||| ||||||| |||||| | ||  |||||||||||||||||| |||| ||  ||||||  || ||||||||||||||||||||||    
T  41606196 agcagcttatagcttatataagaaccatttgactttattttatcctttgttatcaaaatagtttttacataaacacttgtatgataa 41606110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 47970310 - 47970240
Alignment:
Q  186 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    |||||||| |||||||| ||||||||||||| || | ||||| ||||||||||| ||||| ||||| ||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatgacaagt 47970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 51044546 - 51044596
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||||||||||| || | ||||| |||||||||||||||||    
T  51044546 tttgactttattttatcttttgttatagaaatagcttatacataaacactt 51044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 55599149 - 55599099
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||| ||||||| ||||||| ||||||||| ||||||||||    
T  55599149 tttgactttattttgtcttttgttacaaaagtaacttatatataaacactt 55599099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 3549590 - 3549639
Alignment:
Q  167 aagcaacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||| ||||||||||||||||| |||||| || |||||||||||||    
T  3549590 aagcaactcataggttatatgaaaatcatttgatttgattttatcttttg 3549639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 10192292 - 10192235
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaata 227  Q
    |||||||||  ||||||||||| |||||||||||||| ||||||||| || |||||||    
T  10192292 caacttataacttatatgaaaacaatttgactttattctatcttttgttataaaaata 10192235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 24193593 - 24193508
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||  ||||||||||||| ||| ||| | |||||| ||||| |  |||||||||||||||||||  |||| |||||||||    
T  24193593 caacttataacttatatgaaaatagtttaactctgttttatattttgttgtaaaaataacttatacataagtacttatatgataag 24193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 26884001 - 26883928
Alignment:
Q  172 acttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||| ||||||||||| ||||| |||| ||||||||| ||  || | ||||||||||||||||| |||||    
T  26884001 acttatagcttatatgaaaacaatttaacttcattttatctcttcttagagaaataacttatacataatcactt 26883928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 27623640 - 27623579
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 234  Q
    ||||||| |||||| |||||| |||||||||||||||||||||| || | ||||| ||||||    
T  27623640 cttatagcttatattaaaatagtttgactttattttatcttttgttatacaaatatcttata 27623579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 36734890 - 36734817
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||| ||||||||||||||| |||||| || | ||| |  |||||||||| ||||| ||||||||    
T  36734890 ttatatgaaaatagtttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataa 36734817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 40865806 - 40865746
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    ||||||||||||| |||||||||||| ||||||||| || |||||||  |||||||||||||    
T  40865806 ttatatgaaaata-tttgactttattctatcttttgttagaaaaatagtttatacataaaca 40865746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 51555956 - 51556013
Alignment:
Q  197 tgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||||||| || || |||| ||||||||||| ||||| ||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataa 51556013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 32920462 - 32920543
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    |||||||||| || ||| ||||  ||||||||||||||||||  ||| || ||||||| ||||| ||||||||||| |||||||    
T  32920462 caacttatagcttctattaaaacgatttgactttattttatc--ttgttataaaaatagcttatccataaacacttatatgata 32920543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 4191734 - 4191663
Alignment:
Q  184 tatgaaaataatttgactttatttt-atcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| | |||||||||||||| |||||||| || | ||||| ||||||||||| ||||| ||||||||    
T  4191734 tatgaaaacagtttgactttatttttatcttttgttatagaaatagcttatacataagcacttatatgataa 4191663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 7022662 - 7022595
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 251  Q
    |||||||||||||||||| |||||||||||||  || ||||||| ||||||  ||| ||||| |||||    
T  7022662 tatgaaaataatttgactctattttatcttttcttataaaaatagcttataattaagcacttatatga 7022595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 18630697 - 18630642
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||| || |||||||||| |||||||||||  | |||||||||||||||||||||    
T  18630697 ttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatcttttg 18630642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 254
Target Start/End: Complemental strand, 23819045 - 23819014
Alignment:
Q  223 aaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||||||||||||||||||||||    
T  23819045 aaataacttatacataaacacttgtatgataa 23819014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 24444046 - 24443959
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||| ||||||||||||  ||||| |||||||||| ||||| |  | ||||  |||||||||||  |||| |||||||||||    
T  24444046 caacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtg 24443959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 32724116 - 32724081
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||| ||||||||||||||||||||||    
T  32724116 ttatatgaaaatagtttgactttattttatcttttg 32724081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 35743298 - 35743227
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||| || |||| ||||||||||||||||| || | ||||||||| ||||| ||||| | |||||||||    
T  35743298 tatgaaagtagtttgcctttattttatcttttgttatagaaataacttgtacatcaacacatatatgataag 35743227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 44007940 - 44007983
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggta 219  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||    
T  44007940 atagcttatatgaaaacaatttgtctttattttatcttttggta 44007983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 46859935 - 46859892
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| || ||||||||| |||||||||||||||||||||||    
T  46859935 cttatagattgtatgaaaatgatttgactttattttatcttttg 46859892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 6364154 - 6364088
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||| |||| |||| | ||||| |||||||||||||||||| || | ||||| |||||||||||    
T  6364154 cttatagcttatgtgaacagaatttcactttattttatcttttgttatagaaatagcttatacataa 6364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 19040181 - 19040247
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa 240  Q
    |||||| || ||||||| || |||||||||||||||||||||  || | ||||| ||||||||||||    
T  19040181 ttatagcttttatgaaattattttgactttattttatctttttctaaagaaatagcttatacataaa 19040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 22684589 - 22684663
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||| ||||||||||||||||| | |||| || | ||||| |||||||| || || || |||||||||    
T  22684589 ttatatgaaaacaatttgactttattttaccgtttgttatagaaatagcttatacagaagcatttatatgataag 22684663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 264
Target Start/End: Complemental strand, 24929501 - 24929407
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtgatgatgt 264  Q
    |||||||||| || |||||||| | || ||||||||||||||||||| || | |||||  | ||||| ||||| || ||||||||| ||| ||||    
T  24929501 caacttatagcttttatgaaaacagttagactttattttatcttttgttatagaaatagttcatacaaaaacaattatatgataagagattatgt 24929407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 46013363 - 46013437
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||  |||||| |||| | |||||||||||||||||||||| | || |||||  ||| ||||||||||||    
T  46013363 aacttataacttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaacactt 46013437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 46247225 - 46247151
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||  |||||| |||| | |||||||||||||||||||||| | || |||||  ||| ||||||||||||    
T  46247225 aacttataatttatataaaaacagtttgactttattttatcttttgttccagaaatagtttacacataaacactt 46247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 47119027 - 47119073
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||||||||| ||||| ||||| ||||||||||||    
T  47119027 caacttatagcttatatgaaaacaatttaactttgttttatcttttg 47119073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 53192416 - 53192454
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttatttta 209  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  53192416 aacttatagattctatgaaaataatttgactttatttta 53192454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 55437354 - 55437388
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttat 210  Q
    |||| ||||||||||||||||||||||||||||||    
T  55437354 atagcttatatgaaaataatttgactttattttat 55437388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 15511425 - 15511482
Alignment:
Q  199 actttattttatctt-ttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||| ||| || ||||||||||||||||||| |||||  ||||||||    
T  15511425 actttattttatcttcttgttataaaaataacttatacataagcacttacatgataag 15511482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 248
Target Start/End: Complemental strand, 15969886 - 15969833
Alignment:
Q  196 ttgactttattttatcttttggt-acaaaaataacttatacataaacacttgta 248  Q
    ||||||||| ||||||||| | | | ||||||||||||||||||||||||||||    
T  15969886 ttgactttactttatctttcgtttataaaaataacttatacataaacacttgta 15969833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 24091467 - 24091434
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattt 207  Q
    |||||| |||||||||||||||||||||||||||    
T  24091467 ttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 24160998 - 24160929
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||  || ||||||||||||| |||| |||||||| |||| || | ||||| |||||||||||    
T  24160998 caacttatagcctacatgaaaataatttaacttgattttatcctttgttatagaaatagcttatacataa 24160929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 25434522 - 25434567
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||||    
T  25434522 caacttatagcttatatgaaaacatattgactttattttatctttt 25434567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 45128376 - 45128441
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||| |||||||| |||||||||| || ||||||||||||| || | |||||  ||||||||||    
T  45128376 ttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataa 45128441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 49803208 - 49803151
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    |||| |||||| ||||| |||| ||||||||||||| || | ||||||||||||||||    
T  49803208 ttatgtgaaaacaatttaacttcattttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 50746008 - 50745939
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||| ||| |||||| |||| | ||||| |||||||||||||||| || ||||||| |||| ||||||    
T  50746008 caacttgtagtttatataaaaacagtttgattttattttatcttttgttataaaaatagcttagacataa 50745939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 53626781 - 53626717
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg--gtacaaaaataacttatac 235  Q
    ||||||| ||||||||||| | ||||| ||||||||||||||||   || |||||||||||||||    
T  53626781 cttatagcttatatgaaaacattttgaatttattttatcttttgttatagaaaaataacttatac 53626717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 20936070 - 20936110
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| ||| ||||||||| ||||||||||||||||||||||    
T  20936070 atagcttacatgaaaatagtttgactttattttatcttttg 20936110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 21193981 - 21193937
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||||||||||||||  || ||||||| |||||||||||    
T  21193981 tttgactttattttatcttttactataaaaatagcttatacataa 21193937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 21952966 - 21952930
Alignment:
Q  173 cttataggttatatgaaaataatttgactttatttta 209  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  21952966 cttatagcttatatgaaaacaatttgactttatttta 21952930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 27321946 - 27321978
Alignment:
Q  223 aaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||||||||||| |||||||||    
T  27321946 aaataacttatacataaacacttatatgataag 27321978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 27968120 - 27968072
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacac 243  Q
    ||||||||||||||||| |||| || ||||||||||| || ||||||||    
T  27968120 tttgactttattttatcatttgttataaaaataacttttatataaacac 27968072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 29194476 - 29194524
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataac 229  Q
    ||||||||||||| ||||| ||||||||||||||||  || ||||||||    
T  29194476 ttatatgaaaatagtttgattttattttatcttttgtcacgaaaataac 29194524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 43372035 - 43372111
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    |||||| |||||| |||| | ||||||| |||||||||||||| || ||||||| |||||   ||||||||| ||||    
T  43372035 ttatagcttatataaaaacagtttgactgtattttatcttttgttataaaaataccttatgtttaaacacttatatg 43372111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 55870403 - 55870459
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaat 226  Q
    |||||||||| |||| |||||| | ||||||||||||| |||||||| || ||||||    
T  55870403 caacttatagcttatgtgaaaacagtttgactttatttgatcttttgttataaaaat 55870459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 41620365 - 41620437
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  41620365 tatatgaacataatttgactttattttatcttttgttacaaaaataacttatatataagcacttgtatgataa 41620437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 4558803 - 4558731
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||  |||||||||||||||| |||||||||||||||||  || | ||||| |||||||||||||||||    
T  4558803 cttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataaacactt 4558731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 38561734 - 38561649
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||  || || |||||| |||||||||||||||||||||| || | |||||||||||| ||| |||||| ||| |||||    
T  38561734 caacttatagtatagataaaaatagtttgactttattttatcttttgttatataaataacttatatatagacacttatataataag 38561649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 38874643 - 38874570
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| |||||||||  ||||||||||| | |||| ||| ||||||||||||||||||| || |||||    
T  38874643 ttatatgaaaagaatttgactcgattttatctttagttacagaaacaacttatacataaacacttatacgataa 38874570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 1470921 - 1470985
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||||| |||||||||| ||||||||||||||||||||||||  || | ||||| |||||||||    
T  1470921 cttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 40728505 - 40728565
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||||||||| || | ||||||||||| ||| ||||||| |||||||||    
T  40728505 tttgactttattttatcttttgttatagaaataacttatgcatgaacacttatatgataag 40728565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 11494155 - 11494076
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||| ||||||||||| | ||||||||||| |||||||||| ||  |||||||| |||||| || ||||| |||||||||    
T  11494155 atagtttatatgaaaaaagtttgactttatgttatcttttgttatgaaaataacatatacaaaagcacttatatgataag 11494076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 14482192 - 14482125
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||| |||||||||||||||||||||||| || | |||||  |||||||||| ||||| |||||||||    
T  14482192 aaaacaatttgactttattttatcttttgttatagaaatagtttatacataagcacttatatgataag 14482125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 255
Target Start/End: Complemental strand, 40357893 - 40357822
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||| |||||||||||||||||| || |  || | |||||||||||| |||| |||||||||    
T  40357893 tatgaaaataattttactttattttatcttttgttatatcaagagcttatacataaatacttatatgataag 40357822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 26820204 - 26820142
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatac 235  Q
    ||||||| |||||  |||||| |||||||||||||||||||||| || | |||||||||||||    
T  26820204 cttatagtttataacaaaatagtttgactttattttatcttttgttatagaaataacttatac 26820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 29056064 - 29056130
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgt 247  Q
    ||||||||||| || ||||||||||||||||||||| |  | || || |||||||||||||||||||    
T  29056064 ttatatgaaaacaaattgactttattttatcttttgctctagaagtagcttatacataaacacttgt 29056130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 34770900 - 34770854
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  34770900 caacttatagcttaaatgaaaacaatttgactttattttatcttttg 34770854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 2364558 - 2364619
Alignment:
Q  193 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||||||||||| || ||||||| | |||||||||| | || ||||||||    
T  2364558 aatttgactttattttatcttttgctataaaaatagcgtatacataaatagttatatgataa 2364619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 7026728 - 7026655
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| ||||| |||||||||||||||||| || || | || ||||| ||||| ||||| ||||||||    
T  7026728 ttatatgaaaacaattttactttattttatcttttgttataacagtagcttatgcataagcacttatatgataa 7026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 31884598 - 31884517
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||| ||||||||||| ||||  | || ||||||| ||||| || | ||||||||||||||||  |||||||||||||||    
T  31884598 ttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacatatgcacttgtatgataag 31884517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 35298539 - 35298624
Alignment:
Q  170 caacttataggttatat-gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||| |||||| |||||   |||| ||||||||||||||||| |||  ||||| ||||||||||| ||||| ||||||||    
T  35298539 caacttatagtttatattgaaaactgtttggctttattttatcttttgttactgaaatagcttatacataagcacttatatgataa 35298624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 42597409 - 42597340
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||| ||  ||||||| ||||| |||||||||||||||||| || | ||||| |||||||||||    
T  42597409 caacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataa 42597340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 12224974 - 12225030
Alignment:
Q  183 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||| ||||||||||||||||||||||    | |||||||||||||||||    
T  12224974 atatgaaaatagtttgactttattttatcttttgtcttagaaataacttatacataa 12225030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 29262947 - 29262979
Alignment:
Q  181 ttatatgaaaataatttgactttattttatctt 213  Q
    |||||||||||||||||||||||||||||||||    
T  29262947 ttatatgaaaataatttgactttattttatctt 29262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 2100802 - 2100767
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||| ||||||||||||||||||||||    
T  2100802 ttatatgaaaatattttgactttattttatcttttg 2100767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 263
Target Start/End: Complemental strand, 14949882 - 14949803
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtgatgatg 263  Q
    |||||||| | ||||||| |||||||||||||| || | || || |||||||||||  ||||||||||||| || |||||    
T  14949882 tatgaaaagagtttgactctattttatcttttgttatagaagtagcttatacataagaacttgtatgataaatgttgatg 14949803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 29699237 - 29699178
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||||||||| || | ||||||||| ||||||| || || ||||||||    
T  29699237 tttgactttattttatcttttgttatagaaataacttgtacataagcatttatatgataa 29699178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 29973089 - 29973014
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||| |||| |||||||| ||||||||||||||| ||| || || | ||||| |||||| |||| |||||    
T  29973089 caacttatagcttatgtgaaaatagtttgactttattttaccttgtgttaaagaaatagcttatatataagcactt 29973014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 35869845 - 35869758
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||| ||||||||||||  ||||| |||||||||| ||||| |  | ||||  |||||||||||  |||| |||||||||||    
T  35869845 caacttatagcttatatgaaaattgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttatatgataagtg 35869758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 40280281 - 40280352
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| ||||| |||||||||||||||||| |  | |||||||||||| |||  ||||| |||||||||    
T  40280281 tatgaaaacaattttactttattttatcttttgttgtagaaataacttatatataggcacttatatgataag 40280352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 42237488 - 42237539
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaa 225  Q
    |||||| ||||||||||| ||||| |||||||||||||||||| || |||||    
T  42237488 ttatagcttatatgaaaacaatttaactttattttatcttttgttataaaaa 42237539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 3537093 - 3537139
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| ||||| ||||| ||||| ||||||||||||||||||||||||    
T  3537093 caacctatagcttatacgaaaacaatttgactttattttatcttttg 3537139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 3945281 - 3945207
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||| |||||| ||||||  || | |||||||||||||||| ||   |||||||||||| ||||||||||    
T  3945281 aacttatagcttatataaaaatagcttcattttattttatcttttgttattgaaataacttatatataaacactt 3945207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 11415151 - 11415073
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtgat 259  Q
    |||||| ||||||||||||||||||| || || ||| || |  |||  ||||||||| ||||||| |||||||||||||    
T  11415151 ttatataaaaataatttgactttattctacctcttgctaaagcaatggcttatacatgaacacttatatgataagtgat 11415073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 12361197 - 12361131
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||| ||||||||||| |||||||||| |||||||||||   || | |||||||||||| ||||    
T  12361197 cttatagcttatatgaaaacaatttgacttcattttatctttatttatagaaataacttatatataa 12361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 26215493 - 26215435
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||| ||||||| ||| |||||||||||||||||| || | ||||| |||||||||||    
T  26215493 ttatacgaaaatagtttaactttattttatcttttgttatagaaatagcttatacataa 26215435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 27728094 - 27728128
Alignment:
Q  181 ttatatgaaaataatttgactttattttatctttt 215  Q
    ||||||||||||| |||||||||||||||||||||    
T  27728094 ttatatgaaaatagtttgactttattttatctttt 27728128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 31315533 - 31315598
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| |||||||||||||||||||||  || ||||||| ||||||||  ||||||| ||||||||    
T  31315533 aaaatagtttgactttattttatcttttattataaaaatagcttatacactaacactt-tatgataa 31315598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 34563244 - 34563174
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||  ||||||||||||||||| ||||  | | |||||||||||| |||| ||||| ||||||||    
T  34563244 tatgaaaattgtttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataa 34563174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 41336718 - 41336776
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||| ||||||||| ||||||||||||||  | |||||| | ||||||||||    
T  41336718 ttatatgaaaacaatttgactatattttatcttttgtcataaaaatgatttatacataa 41336776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 1112858 - 1112785
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttg 246  Q
    ||||||| |||| |||||| ||||| || ||||||||||||||| || | ||||| | ||||||||| ||||||    
T  1112858 cttatagcttatgtgaaaacaatttaaccttattttatcttttgttatagaaatagcatatacataagcacttg 1112785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 10939385 - 10939328
Alignment:
Q  200 ctttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||||||||||  | | |||||||||||||||||||| | |||| |||||||    
T  10939385 ctttattttatcttttgtaatagaaataacttatacataaacagtagtataataagtg 10939328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 11056729 - 11056814
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| ||||||||||||| ||  ||||||||||  |||||| || | ||||| || || ||| ||||||| |||||||||    
T  11056729 caacttatagcttatatgaaaatagttcaactttatttttccttttgttatagaaatagctcatgcatgaacacttatatgataag 11056814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 31705090 - 31705025
Alignment:
Q  173 cttataggttatatgaaaa-taatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||||| ||||||||||  ||||||||| | |||||||||||| ||||| ||||| |||||||||    
T  31705090 cttatagcttatatgaaacgtaatttgacatgattttatcttttagtacagaaatagcttatacat 31705025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 33209285 - 33209366
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||| ||||||||||| | || |||||||||||||||||   || | ||||| |||||  ||| |||||||||||||||    
T  33209285 cttatagtttatatgaaaacagttcgactttattttatctttcattatagaaatagcttatttatagacacttgtatgataa 33209366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 34788493 - 34788574
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||| ||||||| ||| | |||||||||||||||||||| |  | ||||||| ||||||| ||| || || |||||||||    
T  34788493 ttatagcttatatggaaacagtttgactttattttatctttggtcataaaaatagcttatacgtaagcatttatatgataag 34788574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 787172 - 787252
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| |||||||| || ||||||||||||||||||||| || |||  ||| | |||| |||||| |||||  |||||||    
T  787172 ttatagcttatatgataacaatttgactttattttatcttatgttacggaaacagcttaaacataagcacttagatgataa 787252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 2699303 - 2699231
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||||| ||| |||||||||||| ||||| |  | |||||||||||| ||| |||| | |||||||    
T  2699303 ttatatgaaaatagtttaactttattttatattttgttgtagaaataacttatatatagacacgtatatgata 2699231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 7878551 - 7878587
Alignment:
Q  173 cttataggttatatgaaaataatttgactttatttta 209  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  7878551 cttatagcttatatgaaaacaatttgactttatttta 7878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Original strand, 10062218 - 10062262
Alignment:
Q  199 actttattttatcttttggtacaaaaataacttatacataaacac 243  Q
    ||||||| || |||||||||| | |||||||||||||||||||||    
T  10062218 actttatcttttcttttggtatagaaataacttatacataaacac 10062262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Complemental strand, 11376714 - 11376670
Alignment:
Q  167 aagcaacttataggttatatgaaaataatttgactttattttatc 211  Q
    ||||| ||||||| |||||| ||||||||| ||||||||||||||    
T  11376714 aagcatcttatagcttatatcaaaataattagactttattttatc 11376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 35374439 - 35374479
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttt 214  Q
    |||||| ||||||||||| ||||| ||||||||||||||||    
T  35374439 ttatagcttatatgaaaacaatttaactttattttatcttt 35374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 39392748 - 39392808
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||||||||| || | |||||  |||||||||  ||||| |||||||||    
T  39392748 tttgactttattttatcttttgttatagaaatagtttatacatagccacttatatgataag 39392808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 37788868 - 37788786
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  37788868 caacttatagattatacgaaaataattggactttattttatcttttgtta-taaaataacttatacataaacacttgtatgata 37788786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 38462277 - 38462202
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||| | ||||||||||||||||||||||||| | ||||| |||||| |||||||||| |||||||||||    
T  38462277 tatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataaacacttatatgataagtg 38462202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 33307653 - 33307728
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    ||||||||||||||||||||||||||| || ||||| |||  ||||| ||||||||||| ||||| ||||||||||    
T  33307653 ttatatgaaaataatttgactttatttcatattttgttactgaaatagcttatacataagcacttatatgataagt 33307728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 1395673 - 1395611
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    |||| |||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||    
T  1395673 atagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 16790432 - 16790502
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||| |||||||||||| ||| || ||||||| ||||||||||| ||||| ||||||||    
T  16790432 tatgaaaataatttgattttattttatctgttgttataaaaatagcttatacataagcacttatatgataa 16790502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 29771817 - 29771751
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 236  Q
    |||||||||| ||||||||||||||||| |||||| ||| |||||||||| | ||||||||||||||    
T  29771817 caacttatagtttatatgaaaataatttcactttactttgtcttttggtatagaaataacttataca 29771751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 43116492 - 43116574
Alignment:
Q  172 acttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| ||||||||||||  ||||| || ||||||||||||| || | ||||| |||| |||||||||||||||||||||    
T  43116492 acttatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacacttgtatgataa 43116574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 49772747 - 49772817
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||| |||| ||||||||||||| ||||  |||||||||| ||||||||||||||||| |||||||||||    
T  49772747 gaaaacaattagactttattttattttttattacaaaaatagcttatacataaacacttatatgataagtg 49772817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 264
Target Start/End: Complemental strand, 39971309 - 39971233
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtgatgatgt 264  Q
    |||| |||||| ||||||||||||||||| || | || |||||||||||||| ||||| ||||||||||| ||||||    
T  39971309 aaaacaatttggctttattttatcttttgttatataagtaacttatacataagcacttatatgataagtgttgatgt 39971233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 3182438 - 3182509
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| |||||||||||||||||||||||  || | || ||||||||||||||||||||  ||||||||    
T  3182438 tatgaaaacaatttgactttattttatctttttctatagaagtaacttatacataaacacttaaatgataag 3182509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 22214743 - 22214830
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||||||||||||| | ||||| ||||||||||||| |||| || | |||||| |||||||||  ||||| || ||||||||    
T  22214743 caacttataggttatatgaatacaatttcactttattttatcctttgttatagaaataatttatacatacgcacttatacgataagtg 22214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 44374720 - 44374791
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| |||||||||||||||||||||||| || | | ||| ||||||||||| ||||| |||||||||    
T  44374720 tatgaaaacaatttgactttattttatcttttgttaaagatatagcttatacataagcacttatatgataag 44374791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 48397654 - 48397587
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    |||||||||| ||| || |||| |||||||||||||||||||||||  || |||||||||||||||||    
T  48397654 caacttatagcttaaataaaaacaatttgactttattttatcttttattataaaaataacttatacat 48397587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 20349549 - 20349623
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||| ||||| |||||||| |||| |||  ||||| |||||||| |||||||| |||||||||    
T  20349549 ttatatgaaaataattagacttcattttatcctttgttactgaaatagcttatacacaaacacttatatgataag 20349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 32555043 - 32555089
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  32555043 caacttatagcttataggaaaataatttgactttattttatcttttg 32555089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 36783402 - 36783472
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataac-ttatacataaacactt 245  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||| | ||||| | ||||||||||||||||    
T  36783402 atagtttatatgaaaacaattttactttattttatcttttggtatagaaatagctttatacataaacactt 36783472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 3758042 - 3757981
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||| | |||||||||||||||| ||||| |||||||||| ||||||||||| |||||    
T  3758042 tatgaaaagagtttgactttattttatattttgttacaaaaatagcttatacataagcactt 3757981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 4990630 - 4990691
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    ||||||||||| | |||||||| |||||||| |||| |||| ||||||||||||||||||||    
T  4990630 ttatatgaaaaaagtttgacttcattttatcctttgatacagaaataacttatacataaaca 4990691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 20192671 - 20192743
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||| |||||||||||   |||||||||||||||||||||| || | ||||| ||||||||||| |||||    
T  20192671 cttatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactt 20192743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 32703142 - 32703062
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| ||||||||||| ||||||| |||||||||||||||   | | ||||| |||||||||||||| || ||||||||    
T  32703142 ttatagcttatatgaaaacaatttgagtttattttatcttttataatagaaatagcttatacataaacatttatatgataa 32703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 37689450 - 37689509
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    |||||| ||||||||||||||||| |||||| ||||||||||| || ||||||| |||||    
T  37689450 ttatagcttatatgaaaataatttaactttactttatcttttgttataaaaatagcttat 37689509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 24235745 - 24235811
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 236  Q
    |||||||||| ||||||  ||||| ||||||||||| |||||||||| || | ||||||||||||||    
T  24235745 caacttatagcttatattcaaatagtttgactttatattatcttttgttatagaaataacttataca 24235811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 24605103 - 24605153
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||||| |||||||| || | |||||||||||||||||||||||    
T  24605103 tttgactttatttcatcttttgttatagaaataacttatacataaacactt 24605153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 48364956 - 48365010
Alignment:
Q  185 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||| |||||||||||||||||||||||| ||   |||||||||||||||||    
T  48364956 atgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataa 48365010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 23530246 - 23530335
Alignment:
Q  170 caacttataggttatatgaaaa-taatttgactttattttatcttttggtacaaaaataacttatacataaacac-ttgtatgataagtg 257  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||| || |||| || ||| ||| ||| ||| || |||||||||||    
T  23530246 caacttatactttatatgaaaaataatttgactttattttatcttttgttagaaaactagcttctacgtaagcactttatatgataagtg 23530335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 25195419 - 25195386
Alignment:
Q  183 atatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||||||||||||||||||||||||    
T  25195419 atatgaaaataatttgactttattttatcttttg 25195386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 27792869 - 27792796
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||| |||||| ||||||||||||||| |    ||||| ||||||||||| ||||| ||||||||    
T  27792869 ttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatgataa 27792796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 28779364 - 28779279
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||  || || ||||| | |||||||| || || || |||||||||    
T  28779364 caacttatagcttatatgaaaatagtttgactttatttcatctgatgttataaaaacagcttatacaaaagcaattatatgataag 28779279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 53736186 - 53736251
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttg 246  Q
    ||||||||||||| |||||| ||||||||||||||| || | |||||||| |||| ||| ||||||    
T  53736186 ttatatgaaaatagtttgacattattttatcttttgttatagaaataactcatacgtaagcacttg 53736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 54775125 - 54775052
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| |||||  |||||||||||||||||||||| || | |||||||||| || ||| ||||| ||||||||    
T  54775125 ttatataaaaatggtttgactttattttatcttttgttatagaaataacttaaacgtaagcacttttatgataa 54775052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 2865721 - 2865765
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttt 214  Q
    |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  2865721 caacttataggttatatgaaaacaatttgactttgttttaacttt 2865765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 8142803 - 8142847
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||||| || ||||||| |||||||||||||||||    
T  8142803 tttattttatcttttgatataaaaatagcttatacataaacactt 8142847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 10101549 - 10101601
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||||||||| ||||| |||||||||||||||||| || | |||||||||||    
T  10101549 ttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 10212474 - 10212526
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||||||||| ||||| |||||||||||||||||| || | |||||||||||    
T  10212474 ttatatgaaaacaatttaactttattttatcttttgttatagaaataacttat 10212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 30669036 - 30669104
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    |||||| ||||| ||||| ||||  || ||||||||||||||| || ||||||| ||||||||||||||    
T  30669036 ttatagtttataagaaaaaaattcaacattattttatcttttgttataaaaatagcttatacataaaca 30669104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 36646455 - 36646527
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||| ||||  ||||||||||||||||||  | | ||||| |||||| || |||||||||||||||    
T  36646455 ttatatgaaaacaattatactttattttatcttttgtcatagaaatagcttatatatcaacacttgtatgata 36646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 21574495 - 21574425
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||| ||||||| ||| ||||| ||||||||||||||| | ||| ||||| |||| ||||||||||||||    
T  21574495 ttatagcttatatgtaaacaatttaactttattttatcttgt-gtataaaaacaactcatacataaacactt 21574425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 32663636 - 32663566
Alignment:
Q  183 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||  |||||| |||||| |||||||| || | ||||||||||| |||||||| |||||||||||    
T  32663636 atatgaaaattgtttgaccttattt-atcttttgttatagaaataacttatgcataaacaattgtatgataa 32663566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 36283659 - 36283703
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||    
T  36283659 tttgactttattttatcttgt--tacaaaaataacttatacataaac 36283703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 41028939 - 41028998
Alignment:
Q  196 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||| ||||||| || | ||||| ||||||||||| ||||| |||||||||    
T  41028939 ttgactttattttttcttttgttatagaaatagcttatacataagcacttatatgataag 41028998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 22232823 - 22232749
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||| | ||||||||||||||||| |||| || | ||||| ||||||||| | || || |||||||||    
T  22232823 ttatatgaaaacagtttgactttattttatcatttgttatataaatagcttatacatgagcatttatatgataag 22232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 25129833 - 25129752
Alignment:
Q  175 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||| ||||||||||  | |||||||||||| |||||||||||| |  ||||| |||||||||| || ||||||| ||||||    
T  25129833 tatagattatatgaaagcagtttgactttattgtatcttttggtataggaataagttatacataagca-ttgtatggtaagtg 25129752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 26990730 - 26990696
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  26990730 tatatgaaaagaatttgactttattttatcttttg 26990696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 49586984 - 49587042
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 234  Q
    |||| ||||||||||| | |||||||||||||||||||||| || | ||||| ||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 53457371 - 53457301
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||| |||||||||||||||||||||| ||   || || ||||||| |||||||||  |||||||    
T  53457371 tatgaaaatagtttgactttattttatcttttgttatcgaagtagcttatacgtaaacacttaaatgataa 53457301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 2128331 - 2128384
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    |||| ||||| |||||||||||||||||| || | ||||| |||||||||||||    
T  2128331 aaaacaatttaactttattttatcttttgttatagaaatagcttatacataaac 2128384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 3467450 - 3467491
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatc 211  Q
    ||||||||||  |||||||||| |||||||||||||||||||    
T  3467450 caacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 16790181 - 16790234
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||| || | |||||||||||| |||| ||||| ||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgataa 16790234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 24268228 - 24268301
Alignment:
Q  182 tatatgaaaataa-tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||| || |||||||| |||||| |||||| || | |||||  |||||||||| ||||||||||||||    
T  24268228 tatatgaaaaaaagtttgacttgattttaacttttgctatagaaatagtttatacataagcacttgtatgataa 24268301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 25183053 - 25183134
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca-taaacacttgtatgata 253  Q
    ||||||| | |||||||||||  || ||||||||| |||||||| || |||||||  ||||||| ||||||||| |||||||    
T  25183053 cttatagctcatatgaaaatagcttaactttatttaatcttttgttataaaaatagtttatacattaaacacttatatgata 25183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 26599185 - 26599140
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||  |||||||||||  |||||||||||||||||||||||    
T  26599185 aacttataccttatatgaaaactatttgactttattttatcttttg 26599140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 32064430 - 32064361
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||||||||||||||||| ||||| |  | ||| ||||||||||| | ||||  |||||||||||    
T  32064430 aaaataatttgactttattttattttttgttttagaaagaacttatacattagcactaatatgataagtg 32064361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 33883018 - 33882969
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    |||||||||| |||||||||||||||||| || | |||||| ||||||||    
T  33883018 aaaataatttcactttattttatcttttgttatagaaataatttatacat 33882969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 36101576 - 36101491
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| ||||| ||||  | ||||||||||||||||||| |  |||| ||||| ||||| ||||| ||||| | |||||||    
T  36101576 caacttatagattatacgaaatcagtttgactttattttatcttatattacagaaatagcttattcataaccacttatttgataag 36101491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 40122815 - 40122883
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||| || |||||||| | |||||||||||||||||||||| ||   ||||| |||||||||||    
T  40122815 caacttatagctt-tatgaaaacagtttgactttattttatcttttgttattgaaatagcttatacataa 40122883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 49546575 - 49546624
Alignment:
Q  196 ttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||||||||||||| || ||||||| |||| |||||| |||||    
T  49546575 ttgactttattttatcttttgttataaaaatatcttacacataagcactt 49546624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 52413197 - 52413258
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||| ||| | |||||| ||||||||| || ||||||| ||||||||||| |||||    
T  52413197 tatgaaaatagtttcattttattctatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 905043 - 905115
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||| ||| || ||||||||||||||||||||| || | ||||| ||||||| ||| | ||| |||||||    
T  905043 ttatatgcaaacaaattgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatgata 905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 250
Target Start/End: Original strand, 8007761 - 8007837
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    |||||| |||||||| || | |||||||||| ||||||||||| || | ||| | ||||||||||| | ||||||||    
T  8007761 ttatagcttatatgataacagtttgactttactttatcttttgttatagaaacagcttatacataagcccttgtatg 8007837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 10357430 - 10357378
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||||||||| ||||| || ||||||||||||||| || | |||||||||||    
T  10357430 ttatatgaaaaaaatttaacattattttatcttttgttatagaaataacttat 10357378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 15304420 - 15304472
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||||||||| ||||| |||||||||||||||||| || | ||||| |||||    
T  15304420 ttatatgaaaacaatttaactttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 23315631 - 23315591
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatctt 213  Q
    |||||||  |||||||||| |||||||||||||||||||||    
T  23315631 cttatagcctatatgaaaacaatttgactttattttatctt 23315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 42039140 - 42039092
Alignment:
Q  197 tgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||| ||||| |||| ||||| ||||||||||| |||||    
T  42039140 tgactttattttattttttgttacagaaatagcttatacataagcactt 42039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 42809298 - 42809242
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||||||||| ||||| ||| |||||||||||||| || | ||||| |||||||||    
T  42809298 ttatatgaaaacaatttaactatattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 35135725 - 35135809
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| || | ||||| ||||||||||||||||| |||| ||||    
T  35135725 aacttatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatgttaag 35135809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 256
Target Start/End: Complemental strand, 36539754 - 36539668
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||||| || | ||||| |||| |||||| ||||| ||||||||||    
T  36539754 caacttatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttatatgataagt 36539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 7096203 - 7096271
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgat 252  Q
    |||||||||  |||||||||||||||||||||| || | ||||| ||||||||||| ||||||||||||    
T  7096203 tatgaaaatggtttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgat 7096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 9927593 - 9927518
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||| | ||||||||||| |||||||| | ||||||||||||  || | |||||||||||||||||||||||    
T  9927593 caacttatcgcttatatgaaaacaatttgacgtaattttatcttttactatacaaataacttatacataaacactt 9927518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 32059654 - 32059736
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    ||||||| ||||||||||| | ||||||||||||||||| || | |||||||| | ||||||||||| ||||| ||||||||||    
T  32059654 cttatagcttatatgaaaacagtttgactttattttatc-ttagttacaaaaacagcttatacataagcacttatatgataagt 32059736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 4991016 - 4991089
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||| ||||  |||| |||||||||| || ||||||| |||||||| |||||||| ||||||||    
T  4991016 ttatatgaaaataaattgatcttatgttatcttttgttataaaaatagcttatacacaaacacttatatgataa 4991089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 38047929 - 38047986
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||||||||||||||||||||||||||| || | | ||| |||||||||||    
T  38047929 tatatgaaaataatttgactttattttatcttttgttagagatatagcttatacataa 38047986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 9202821 - 9202885
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||| ||||| |||||||||||||||||| |||| ||||| |||||| |||| |||||    
T  9202821 ttatatgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataagcactt 9202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 243
Target Start/End: Original strand, 5284762 - 5284809
Alignment:
Q  196 ttgactttattttatcttttggtacaaaaataacttatacataaacac 243  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||    
T  5284762 ttgactttattttatcttttgttacaaaaatagcatatacataaacac 5284809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 34117595 - 34117669
Alignment:
Q  167 aagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 244  Q
    ||||||||||||| ||||||| |||||||   || ||||||||||||||| || | ||||||||||||||||| ||||    
T  34117595 aagcaacttatagcttatatgtaaataat---accttattttatcttttgttaaagaaataacttatacataagcact 34117669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 912710 - 912796
Alignment:
Q  170 caacttataggttatatgaaaataattt-gactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| | ||||||||||| ||||| ||||||||||||| || || || | ||||||||||| ||||||| ||| |||||||||    
T  912710 caacttattgcttatatgaaaacaattttgactttattttatattgtgttatagaaataacttattcataaacgcttatatgataag 912796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 18704098 - 18704179
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgat 252  Q
    |||||||||| |||||| ||||||  |||||||||||| |||||||| || | |||||||||||||||||  |||| ||||||    
T  18704098 caacttatagcttatataaaaatagcttgactttattt-atcttttgttatagaaataacttatacataagaacttatatgat 18704179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 37063147 - 37063205
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||||| |||||||||||||||||||||| || | |||||  ||||||||||    
T  37063147 ttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataa 37063205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 42181145 - 42181211
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaata 227  Q
    ||||| || |||||||||| |||||||||||  |||||||||| |||||||||||| || |||||||    
T  42181145 ttgtgcaaacaacttatagcttatatgaaaaccatttgactttgttttatcttttgttataaaaata 42181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 6733966 - 6734038
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| ||||| |||||||||||||||| | || |||||||  |||| ||||||||||| ||||||||    
T  6733966 ttatatgaaaacaattt-actttattttatctttcgttataaaaatagattatgcataaacacttatatgataa 6734038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 36796771 - 36796836
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    ||||||| |||| |||||||||||| || ||||||||| ||||| | || ||||||||||||||||    
T  36796771 cttatagcttatgtgaaaataatttaaccttattttattttttgttgcagaaataacttatacata 36796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 10907384 - 10907312
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||| |||||||||| || ||||| ||||||||| | || | || | |||||||||||||||||||||||    
T  10907384 cttatagattatatgaaagtagtttgattttattttaccattagctatagaaataacttatacataaacactt 10907312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 12407752 - 12407807
Alignment:
Q  199 actttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||||| || | ||||| ||||||||| |||||||||||||||||    
T  12407752 actttattttatcttttgttatagaaatagcttatacat-aacacttgtatgataag 12407807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 32969185 - 32969225
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  32969185 atagcttatataaaaataatttgactttattttatcttttg 32969225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 35960421 - 35960338
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||| |||||||||| || |||||||||||||||||||||  || | |||||  |||| |||||| |||| ||||||||    
T  35960421 caacttatagtttatatgaaa-tagtttgactttattttatcttttattatagaaatagtttatgcataaatacttatatgataa 35960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 1636844 - 1636891
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    ||||||||||||||||||| || |||| ||||||||||| ||||||||    
T  1636844 tttgactttattttatcttgtgatacagaaataacttattcataaaca 1636891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 8158374 - 8158409
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||||||| ||||||||||||||||||    
T  8158374 ttatatgaaaataatttaactttattttatcttttg 8158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 9703302 - 9703365
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    |||||| ||| ||||||||||  | |||||||||||||||||| ||| |||| |||||||||||    
T  9703302 caacttgtagcttatatgaaatgagtttgactttattttatctcttgttacagaaataacttat 9703365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 10303802 - 10303763
Alignment:
Q  177 taggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  10303802 taggttaaatgaaaacaatttgactttattttatcttttg 10303763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 10391329 - 10391274
Alignment:
Q  202 ttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||||||||| || ||||||| ||||||| ||| ||||| |||||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataagtg 10391274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 14295511 - 14295468
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||    
T  14295511 cttatagcttatatgaaaacagtttgactttattttatcttttg 14295468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 254
Target Start/End: Original strand, 17756808 - 17756875
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||| ||||||||||||||||||||| || || | ||| |||| |||||||| ||||| ||||||||    
T  17756808 gaaaacaatttgactttattttatcttctgttaaagaaacaactcatacataagcacttatatgataa 17756875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 20982223 - 20982282
Alignment:
Q  196 ttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||| |||| || | ||||| ||||||||||| ||||| |||||||||    
T  20982223 ttgactttattttatcctttgttatagaaatagcttatacataagcacttatatgataag 20982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 29116998 - 29117061
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||| ||||| ||||| | |||||||||||||||||||||| || | ||||||| |||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatcttttgttatagaaataacatatacataa 29117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 35550953 - 35550911
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| |||||||||||||||| |||||||||||||||||||    
T  35550953 cttatagtttatatgaaaataatt-gactttattttatcttttg 35550911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 39750140 - 39750105
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||| ||||||||||||||||||||||    
T  39750140 ttatatgaaaatagtttgactttattttatcttttg 39750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 583836 - 583878
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatctt 213  Q
    ||||||||| ||||||||||| | |||||||||||||||||||    
T  583836 aacttatagcttatatgaaaacagtttgactttattttatctt 583878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 3952104 - 3952061
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  3952104 caacttataggttatatgaaa--aatttgtctttattttatctttt 3952061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 11835268 - 11835210
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||| ||||| |||||||||||||||||| || ||||||   ||||||||||||||||    
T  11835268 gaaaacaatttaactttattttatcttttgttataaaaatggtttatacataaacactt 11835210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 32172658 - 32172576
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||| ||||||| ||| || ||||||| ||||||||||||| |  | |||||  |||||||||| | |||||||||||||    
T  32172658 cttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataagctcttgtatgataag 32172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 39823183 - 39823229
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||| ||| |||||||||| || ||||||||||||||||||||||    
T  39823183 caacttgtagcttatatgaaagtagtttgactttattttatcttttg 39823229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 40048359 - 40048417
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||| | |||||||||||||||||| || | ||| ||||||||||||| |||||    
T  40048359 gaaaataatataactttattttatcttttgttatagaaacaacttatacataagcactt 40048417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 4855706 - 4855637
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||  |||||||| || ||||| |||||||||||| ||||| || ||||||| || ||||||||    
T  4855706 caacttataacttatatgataacaatttaactttattttattttttgttataaaaatagctaatacataa 4855637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 10272493 - 10272538
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||||||| ||||| ||||| |||||||||| ||||||||||||    
T  10272493 caacttatagcttatacgaaaacaatttgacttaattttatctttt 10272538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 11615493 - 11615452
Alignment:
Q  193 aatttgactttattttatcttttggtacaaaaataacttata 234  Q
    |||||||||||||||||||||||| || ||||||| ||||||    
T  11615493 aatttgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 13224406 - 13224353
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||||||||| || | ||||| ||||||||||| ||||| ||||||||    
T  13224406 tttattttatcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 14932280 - 14932223
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||| ||||| |||||||||||||||||| || |||||||  |||||||| |||||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatagattatacatgaacactt 14932223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 34205247 - 34205206
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatc 211  Q
    |||||||||| |||||| ||||||||||||||||| ||||||    
T  34205247 caacttatagcttatataaaaataatttgactttactttatc 34205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 38033940 - 38033891
Alignment:
Q  206 tttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||| || | ||||||||||||||||||||||| | |||||||    
T  38033940 tttatcttttgttatataaataacttatacataaacacttatttgataag 38033891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 39128643 - 39128578
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||| |||| ||| || |||||||||||||||||||||||| || | || || |||||||||||    
T  39128643 ttatagtttatttgagaacaatttgactttattttatcttttgttatagaattagcttatacataa 39128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 6738484 - 6738556
Alignment:
Q  185 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||| |||||||||||||||| ||||||  ||   ||||| |||||||||||  |||| |||||||||||    
T  6738484 atgaaaagaatttgactttattttgtcttttattattgaaatagcttatacataagtacttatatgataagtg 6738556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 12595808 - 12595848
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| ||||||||||| ||||| ||||||||||||||||||    
T  12595808 atagtttatatgaaaacaatttaactttattttatcttttg 12595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Complemental strand, 17498712 - 17498668
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||    
T  17498712 tttattttatcttttgttacataaataacttatacctaagcactt 17498668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 19177487 - 19177403
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||| ||||||||||| | || ||||| |||||||||| || |  | |||||  |||||||||| ||||| ||||||||    
T  19177487 caacttatagcttatatgaaaacagttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgataa 19177403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 21782654 - 21782706
Alignment:
Q  193 aatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||||||||| |||||| || | ||||| |||| ||||||||||||    
T  21782654 aatttgactttattttagcttttgttatagaaatagcttaaacataaacactt 21782706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 28586839 - 28586911
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||| | |||||||||||||||||||||| || | |||||   ||||||||| ||| | |||||||    
T  28586839 ttatatgaaaacagtttgactttattttatcttttgttatagaaatagtgtatacataaccacatatatgata 28586911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 4200232 - 4200150
Alignment:
Q  175 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||| ||||||||||| || ||||||||||||||||||||| || |||||||||||||| ||||||||||  ||||||||||    
T  4200232 tatagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtg 4200150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 15360902 - 15360826
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttg 246  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||| || | |||||||| |||||||||||||||    
T  15360902 caacttatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacacttg 15360826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 256
Target Start/End: Original strand, 28467369 - 28467457
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg--gtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||   |||| |||||  |||||||||| ||| ||||||||||||    
T  28467369 caacttgtagcttatatgaaaataatttgactttattttatcttttgttatacacaaataggttatacataatcacctgtatgataagt 28467457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 255
Target Start/End: Original strand, 45990122 - 45990205
Alignment:
Q  172 acttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||| || ||||||| | ||||||| | || ||||||||||||    
T  45990122 acttatagcttatatgaaaacaattttactttattttatcttttgatataaaaatagcatatacattagcatttgtatgataag 45990205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 49517075 - 49517006
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||| || | |||||||||||||| |||||    
T  49517075 cttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttatacacaaaca 49517006  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 44032065 - 44032145
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| ||||||||||| ||||||||||||||||| |||||| || | |||   ||||||||||||||||| ||||||||    
T  44032065 ttatagcttatatgaaaacaatttgactttattttagcttttgttatagaaacggcttatacataaacacttatatgataa 44032145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 48830142 - 48830210
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    |||||| ||||||||||||| |||||||||||||||||||| |  | | ||||||||||||||||||||    
T  48830142 ttatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataaaca 48830210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 255
Target Start/End: Original strand, 7274015 - 7274086
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||| ||||||||||||||| |||||||| || ||||||||| ||||||||| || || |||||||||    
T  7274015 tatgaaaacaatttgactttatttcatcttttgttataaaaataacatatacataagcatttatatgataag 7274086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 871042 - 870968
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||| || ||||||| ||||||||||||| || |||||||  |||||||||| ||||| |||||||||    
T  871042 ttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttatatgataag 870968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 289225 - 289168
Alignment:
Q  193 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||| ||||| ||||    
T  289225 aatttgactttattttatcttttgctacaaaaatagcttatacttaagcacttatatg 289168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 17269258 - 17269177
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 251  Q
    |||||||| | ||||||||||| ||||||||||||||||  |||||| |  | ||||||||||||||||| ||||| |||||    
T  17269258 caacttattgcttatatgaaaacaatttgactttattttcacttttgttctagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 29007778 - 29007847
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||| ||||||||||||| |||||||||| ||| ||||||| || | |||||||||| ||||||    
T  29007778 caacttatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataacttagacataa 29007847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 259
Target Start/End: Complemental strand, 49557149 - 49557060
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtgat 259  Q
    |||||||||| ||| ||||| |  |||| |||||||||||||||||| || | ||||||||||||||  | ||||| |||||||||||||    
T  49557149 caacttatagcttaaatgaatactatttaactttattttatcttttgttatagaaataacttatacagcagcacttatatgataagtgat 49557060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 29793991 - 29794057
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacac 243  Q
    |||| |||| |||||| |||||||||| ||||||||||||| |||||||||| | |||||||||||||    
T  29793991 atagcttatttgaaaacaatttgactt-attttatcttttgttacaaaaatagcctatacataaacac 29794057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 27738246 - 27738288
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  27738246 ttatagcttatatgaaaacaatttgactttattttatcttttg 27738288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 30371156 - 30371110
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  30371156 caacttatagcttatatgaaaacaatttgagtttattttatcttttg 30371110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 33339500 - 33339566
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| ||| |||| |||||||||||||||| | ||||| ||||||||||||||| | ||||||||    
T  33339500 aaaatagtttaacttcattttatcttttggtatagaaatagcttatacataaacacctatatgataa 33339566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 4256108 - 4256177
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacac 243  Q
    |||||| ||||| ||||||||||| |||||||| ||||||||| |  | ||||| |||||||||||||||    
T  4256108 ttatagcttatacgaaaataatttaactttattgtatcttttgttgtagaaatagcttatacataaacac 4256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 7218136 - 7218181
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||    
T  7218136 caacttatagcttatatgaaaacaatttgactttattttacctttt 7218181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 44936656 - 44936713
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataactt 231  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| || | |||||||||    
T  44936656 ttatagcttatatgaaaatagtttgactttatcttatcttttgttatagaaataactt 44936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 46980202 - 46980275
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| | |||| ||||||||||||||||| || ||||| ||||||| ||||  ||||| ||||||||    
T  46980202 ttatatgaaaacagtttgtctttattttatcttttgatataaaaacaacttatgcatatgcacttatatgataa 46980275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 1232965 - 1233029
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||| ||||||||||| |||||||||||| ||||| || ||||| | ||||| |||||||||||    
T  1232965 ttatacgaaaataatttaactttattttatgttttgttataaaaacagcttatgcataaacactt 1233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 1730881 - 1730825
Alignment:
Q  189 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||| |||||||||||||||||||| | || ||||||| ||||||||||| |||||    
T  1730881 aaatagtttgactttattttatctttggttaaaaaaatagcttatacataagcactt 1730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 10439688 - 10439648
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  10439688 atagcttatatgaaaataatttgacttcattttatcttttg 10439648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 11560622 - 11560686
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||| |||| ||||||| || ||||||||||||| || ||||||| ||||||| |||||||||    
T  11560622 ttatataaaaacaatttgatttgattttatcttttgctataaaaatagcttatacctaaacactt 11560686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 14737781 - 14737829
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataactta 232  Q
    |||||||| |||||||||||||||||||||||| || | ||||||||||    
T  14737781 tatgaaaacaatttgactttattttatcttttgttatagaaataactta 14737829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 15361718 - 15361678
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatctt 213  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  15361718 cttatagcttatatgaaaataatttgactttactttatctt 15361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 16982027 - 16982083
Alignment:
Q  199 actttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||||||||| ||   |||||| |||||||||||||||| |||||||||    
T  16982027 actttattttatcttttgttatcgaaataagttatacataaacacttatatgataag 16982083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 29723506 - 29723454
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatctt 213  Q
    ||||| |||||||||||||  |||||||||||| ||||| |||||||||||||    
T  29723506 ttgtgaaagcaacttatagcatatatgaaaatagtttgagtttattttatctt 29723454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 36641862 - 36641814
Alignment:
Q  191 ataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||||||||||||||||||| || | |||||||||||| ||||    
T  36641862 ataatttgactttattttatcttttgttatagaaataacttatatataa 36641814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 50998555 - 50998491
Alignment:
Q  175 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||| |||||||||| || ||||| ||| |||||||||||| |||| ||||| |||||||||||    
T  50998555 tatagcttatatgaaagtagtttgattttgttttatcttttgttacagaaatagcttatacataa 50998491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 4215374 - 4215311
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||| ||||||||||| | ||||||||||||||||| |||| ||  ||||||||||||| ||||    
T  4215374 atagtttatatgaaaacagtttgactttattttatcatttgctatcaaaataacttatatataa 4215311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 6933037 - 6933112
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtgat 259  Q
    |||||||| |||||||||||||||||| ||||| || ||||||  ||||||||| | ||||| | |||| ||||||    
T  6933037 tatgaaaacaatttgactttattttatgttttgttataaaaatggcttatacatgagcacttatttgattagtgat 6933112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 9656655 - 9656612
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||    
T  9656655 cttatagcttatatgaaaataatttaactttattttattttttg 9656612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 25006096 - 25006135
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttatttta 209  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  25006096 caacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 36151578 - 36151637
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa 240  Q
    ||||| ||||| |||||||||||||||||||||||| ||   ||||| ||||||||||||    
T  36151578 ttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataaa 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 42336659 - 42336596
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 244  Q
    ||||||||||||   ||||||||||||||| ||||| || ||||||||| ||||||||| ||||    
T  42336659 ttatatgaaaattgcttgactttattttattttttgttataaaaataacctatacataagcact 42336596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 215
Target Start/End: Complemental strand, 45234191 - 45234160
Alignment:
Q  184 tatgaaaataatttgactttattttatctttt 215  Q
    ||||||||||||||||||||||||||||||||    
T  45234191 tatgaaaataatttgactttattttatctttt 45234160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 47877127 - 47877084
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  47877127 cttatagtttatatgaaaacaatttgattttattttatcttttg 47877084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 50319286 - 50319231
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||| || ||||||||||||||||||||| || | ||||| |||||||||||    
T  50319286 tatgaaaacaacttgactttattttatcttttgttatagaaatagcttatacataa 50319231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 5421982 - 5422028
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  5421982 caacttatagcttataagaaaacaatttgactatattttatcttttg 5422028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 5592747 - 5592792
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||||||| |||||||| || |||| ||||||||||||||||||    
T  5592747 caacttatagcttatatgacaacaattcgactttattttatctttt 5592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 11211115 - 11211062
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 234  Q
    ||||||||||| ||||| |||||||||||||||||| |  | ||||||||||||    
T  11211115 ttatatgaaaaaaatttaactttattttatcttttgttctagaaataacttata 11211062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 11218175 - 11218228
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||| ||||||||  | | ||||||||||||||||||||||| ||||||||    
T  11218175 tttatttaatcttttgacatataaataacttatacataaacacttatatgataa 11218228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 17420207 - 17420142
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||| ||||||||||||  || ||||||||||||||||||  || |||||||  ||||||||||    
T  17420207 ttatagcttatatgaaaattgttcgactttattttatcttttcttataaaaatagtttatacataa 17420142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 23895332 - 23895259
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||| || | ||||| |||||||||||||||| || | ||||| |||||||||||  |||| |||||||||    
T  23895332 tatatgagaacagtttgaatttattttatcttttgttatagaaatagcttatacataataacttatatgataag 23895259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 36602783 - 36602714
Alignment:
Q  185 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| ||||||||||||||||||| ||| |  | | ||| ||||||||||| ||||| ||||||||    
T  36602783 atgaaaatgatttgactttattttatctattgttgtagatatagcttatacataatcacttatatgataa 36602714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 43372025 - 43372090
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||| |||| |||||||||||||||| |||||||||| ||| || | ||||| | |||||||||    
T  43372025 ttatagcttatgtgaaaataatttgactctattttatctattgttatagaaatagcctatacataa 43372090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 45205076 - 45205031
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||| ||| ||||||| ||||| |||||||||||||||||||||    
T  45205076 caacttctagcttatatggaaatagtttgactttattttatctttt 45205031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 52286682 - 52286601
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||| ||||||||||||  ||| |||||||||||||||||| |  | ||||| ||||| ||||| | ||| |||||||||    
T  52286682 ttatagcttatatgaaaattgtttaactttattttatcttttgttgtagaaatatcttattcataagcgcttatatgataag 52286601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 10854716 - 10854656
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||||||| |  | || ||||||||||| ||||| ||||| |||||||||    
T  10854716 tttgactttattttatcttgtatttcagaaataacttattcataaccacttatatgataag 10854656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 27140482 - 27140418
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||| |||| ||||| |  ||||||||||||||| || | |||||||||| ||||||||||||    
T  27140482 ttatataaaaacaatttaatattattttatcttttgttatagaaataacttacacataaacactt 27140418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 30259552 - 30259636
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||| |||||| |||  | |||||||||||||||| ||||| || | ||||| ||| | ||||| ||||| |||||||||||    
T  30259552 cttatagcttatatcaaagcagtttgactttattttatattttgttatagaaatagcttgtgcataagcacttctatgataagtg 30259636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 37818465 - 37818397
Alignment:
Q  177 taggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||| |||| ||||||| ||||||||  |||||||| ||| || | ||||||||||||||||| |||||    
T  37818465 taggatatacgaaaatagtttgacttcgttttatctcttgttatagaaataacttatacataagcactt 37818397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 38867907 - 38867959
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 234  Q
    |||||||||| | ||||||||||||| ||||||||||| | ||||| ||||||    
T  38867907 tatatgaaaacattttgactttatttaatcttttggtatagaaatagcttata 38867959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 41516148 - 41516188
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  41516148 atagcttatatgaaaatagtttgactttcttttatcttttg 41516188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 41638399 - 41638459
Alignment:
Q  197 tgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||||||||||| || |  | |||||| |||||||||| ||||| |||||||||||    
T  41638399 tgactttattttatcttgtgttctataaataaattatacataagcacttatatgataagtg 41638459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 45107619 - 45107548
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||||| |||||||||||||||| ||||  || | ||||| |||||| |||| ||||| |||||||    
T  45107619 ttatatgaaaatagtttgactttattttat-ttttcttatagaaatagcttatagataagcacttatatgata 45107548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Original strand, 46499934 - 46500002
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    |||| |||||||||||||||||||||||  || | ||||| |||||| |||| ||||| |||| |||||    
T  46499934 aaaacaatttgactttattttatcttttcttatagaaatagcttatagataagcacttatatgttaagt 46500002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 52559901 - 52559957
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    ||||| |||||||||||||||||||||||| ||||| || | | |||| ||||||||    
T  52559901 ttatacgaaaataatttgactttattttatattttgttatagatataatttatacat 52559957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 27584 - 27499
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| || || | ||||||||||||||||| |||||  ||||||||    
T  27584 caacttatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataag 27499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 21351 - 21409
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||| ||||| ||||| |||||||||||||||||  || ||||||| |||||||||||    
T  21351 ttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataa 21409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 8680986 - 8680929
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  8680986 tatgaaaataatttgactttattatatcttttgttacaaaaataacttatacataaac 8680929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 49060547 - 49060463
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||| || | ||||| |||||||||||| |||| |||||||||    
T  49060547 aacttatagcttatataaaaataatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgataag 49060463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 45813242 - 45813311
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||||| | ||||| |||||| ||||    
T  45813242 caacttatagattatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataa 45813311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 30751513 - 30751441
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||  |||| || || ||||| ||||||||    
T  30751513 tatatgaaaataatttgactttattttatattttgttacaaaaatagtttattcacaagcacttatatgataa 30751441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 1417272 - 1417201
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||| || | |||||  ||||||||||||    
T  1417272 caacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataaac 1417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 9527152 - 9527239
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||||| ||||||||||| | |||||||||||| ||||||||| || | | ||| | |||| |||| |||||||||||||||||    
T  9527152 caacttatagtttatatgaaaacagtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataagtg 9527239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 30496712 - 30496637
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||| ||||||||||| ||||| |||||||||||||||||| ||||| || | |||||  ||||||||||||||||    
T  30496712 caacctataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataaacactt 30496637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 23918961 - 23918891
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 244  Q
    |||||| ||||||||||| ||||||||||||||||||||||||  | | | |||||||| |||||||||||    
T  23918961 ttatagcttatatgaaaacaatttgactttattttatcttttgtaatagagataacttacacataaacact 23918891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 39505940 - 39505890
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||||||||    
T  39505940 tttgactctatttaatcttttgctacaaaaataacttatacataaacactt 39505890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 39591540 - 39591593
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttata 234  Q
    ||||||||||| |||||||||||||||||||||||| || | ||||||||||||    
T  39591540 ttatatgaaaacaatttgactttattttatcttttgttatagaaataacttata 39591593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 44241867 - 44241783
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||||  |||||| ||  |||||||||||||| ||| || | |||||||||||||||| |||||| |||||||||    
T  44241867 caacttataggttatacaaaaatagtta-actttattttatctgttgttatagaaataacttatacatacacacttatatgataag 44241783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 45593792 - 45593865
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| | |||||||||||||||| ||||| |||| ||||| ||||||||||| || || ||||||||    
T  45593792 ttatatgaaaacagtttgactttattttatgttttgttacagaaatagcttatacataagcatttatatgataa 45593865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 5010530 - 5010614
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||||  |||||| |||||||||| |||||||||||| ||||| |||| |||||||||  ||||||   ||||||||||||    
T  5010530 caacttataccttatataaaaataatttcactttattttatattttgttacataaataacttgcacataacttcttgtatgataa 5010614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 30134046 - 30133982
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||| ||||| || ||||||||||||||||||||| |  ||||||| |||||||||||||||||    
T  30134046 ttatacgaaaacaagttgactttattttatcttttgttgtaaaaatagcttatacataaacactt 30133982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 28165095 - 28165024
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||| |||||| |||| |||||||||| ||||||||||||| || | ||| ||||||||||||| |||||    
T  28165095 ttatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactt 28165024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 31002766 - 31002723
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||    
T  31002766 cttatagcttatatgaaaatattttgactttattttatcttttg 31002723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 40689051 - 40689094
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||    
T  40689051 cttatagcttatatgaaaataatttaactttattttatcttttg 40689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 5939067 - 5939017
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||||| || ||||| || |||||||||||||||||||||||||    
T  5939067 tttgactttatttaattttttgttataaaaataacttatacataaacactt 5939017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 7244696 - 7244626
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| | ||||||||| |||||||||||| || | ||||| ||||||||||| ||||| ||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttatatgataa 7244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 7453462 - 7453544
Alignment:
Q  173 cttataggttatatgaaaataa-tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||| ||||||||||| || |||||||||||||||||||||| || | ||| | ||||||||| ||| ||| ||||||||    
T  7453462 cttatagcttatatgaaaacaaatttgactttattttatcttttgctatagaaaaatcttatacatgaacccttttatgataa 7453544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 35536104 - 35536046
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||| ||||||||||||||||||||| || || | ||||| |||||||||||    
T  35536104 ttatatgaaaacaatttgactttattttatcttatgttatagaaatagcttatacataa 35536046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 992067 - 991994
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||| |||| ||||||||||| ||||| || | ||| ||||||||| ||| ||||| ||||||||    
T  992067 ttatatgaaaatattttgtctttattttattttttgttatagaaacaacttatacgtaagcacttatatgataa 991994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 3501028 - 3501097
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||  || | || || |||||||||||    
T  3501028 caacttatattttatatgaaaatgatttgactttattttatcttttattatataattagcttatacataa 3501097  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 22759183 - 22759110
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||| |||||  ||||||||||||||||| || | ||||| |||| |||||||| ||| ||||||||    
T  22759183 ttatatgaaaacaattttcctttattttatcttttgttatacaaatagcttaaacataaacgcttatatgataa 22759110  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 47004092 - 47004011
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||| | |||| |||||| |||||||||||||||||| ||| || | ||||| |||| | |||||||||| ||||||||    
T  47004092 cttatagttcatataaaaatagtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgataa 47004011  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 1432032 - 1432098
Alignment:
Q  176 ataggttatatgaaaataatttgacttt---attttatcttttggtacaaaaataacttatacataa 239  Q
    |||| ||||||||||||||||| |||||   ||||||||||||| || | |||||||||||||||||    
T  1432032 atagcttatatgaaaataatttaacttttttattttatcttttgttatagaaataacttatacataa 1432098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 2223143 - 2223071
Alignment:
Q  183 atatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||| |||| |||||||||||  ||||||||||| || | ||||| ||||||||||||||||| || ||||||    
T  2223143 atataaaaacaatttgacttttctttatcttttgttatagaaatagcttatacataaacacttatacgataag 2223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 25511634 - 25511550
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||  |||||| |||| || |||||||||||| |||||||| || | |||||| |||||||  ||||||| |||||||||    
T  25511634 aacttatatcttatataaaaaaaaattgactttatttcatcttttgttatagaaataatttatacaacaacacttatatgataag 25511550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 30456514 - 30456558
Alignment:
Q  172 acttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||    
T  30456514 acttataacttatatgaaaacaatttgactttattttatcttttg 30456558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 41875908 - 41875864
Alignment:
Q  189 aaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||    
T  41875908 aaataatttgaccttattttatcttttagtacagaaataacttat 41875864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 48157173 - 48157253
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaac 241  Q
    ||||| || ||| |||||| |||||| |||| ||||| |||||||||||||||||  || | |||||| ||||||||||||    
T  48157173 ttgtgaaaacaaattatagcttatattaaaacaatttcactttattttatcttttattatagaaataagttatacataaac 48157253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 12835002 - 12835045
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||    
T  12835002 cttatagctaatatgaaaacaatttgactttattttatcttttg 12835045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 213
Target Start/End: Original strand, 22296294 - 22296333
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatctt 213  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  22296294 ttataggttataggaaaataatttaactttattttatctt 22296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 24895373 - 24895330
Alignment:
Q  161 ttgtgtaagcaacttataggttatatgaaaataatttgacttta 204  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  24895373 ttgtgaaaacaacttatagcttatatgaaaataatttgacttta 24895330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 27481357 - 27481440
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||| ||||||| ||| | ||||||||  ||||||| |||| || | ||||| ||||||||||||||||| ||| ||||    
T  27481357 aacttatagcttatatggaaacagtttgacttcgttttatcctttgttatagaaatagcttatacataaacacttatataataa 27481440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 5272893 - 5272959
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgt 247  Q
    ||||||||||| ||| |||||| ||||||||||||| || | |||||  ||||||||||||| ||||    
T  5272893 ttatatgaaaacaatgtgacttaattttatcttttgttatataaatagtttatacataaacagttgt 5272959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 5276207 - 5276157
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||| |||||||||| || ||||||| ||||||||||| |||||    
T  5276207 tttgactttatgttatcttttgttataaaaatagcttatacataagcactt 5276157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 24909672 - 24909638
Alignment:
Q  170 caacttataggttatatgaaaataatttgacttta 204  Q
    |||||||||| ||||||||||||||||||||||||    
T  24909672 caacttatagcttatatgaaaataatttgacttta 24909638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 24973940 - 24973870
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgat 252  Q
    |||||| ||| ||||||| |||||||||||||||| || | ||||| ||| ||||||| ||||| ||||||    
T  24973940 tatatggaaacaatttgaatttattttatcttttgttatagaaatagcttttacataagcacttatatgat 24973870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 27121659 - 27121717
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||| ||||||||||||||||||| |||  || | ||||| |||||||||||    
T  27121659 ttatatgaaaacaatttgactttattttatcatttattatagaaatatcttatacataa 27121717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 31149640 - 31149586
Alignment:
Q  186 tgaaaataatttgactttattttatcttttggtacaaaaataa-cttatacataa 239  Q
    |||||||||||| |||||||||||||||||| || || ||||| |||||||||||    
T  31149640 tgaaaataattttactttattttatcttttgttataataataagcttatacataa 31149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 31167932 - 31167878
Alignment:
Q  186 tgaaaataatttgactttattttatcttttggtacaaaaataa-cttatacataa 239  Q
    |||||||||||| |||||||||||||||||| || || ||||| |||||||||||    
T  31167932 tgaaaataattttactttattttatcttttgttataataataagcttatacataa 31167878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 35808991 - 35809041
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||| |||||||||||||| || | ||||| |||||||||||||||||    
T  35808991 tttgactatattttatcttttgttatagaaatagcttatacataaacactt 35809041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 36532343 - 36532289
Alignment:
Q  186 tgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaa 240  Q
    |||||||||||||||||| |||||||||||| || |   ||||||||||||||||    
T  36532343 tgaaaataatttgactttgttttatcttttgttatagggataacttatacataaa 36532289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 253
Target Start/End: Original strand, 38496583 - 38496659
Alignment:
Q  175 tataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||||||||| | ||||| |||||||||| ||||| || |||| |||||||||  ||| |||||||||||||    
T  38496583 tataggttatatgaaaacagtttga-tttattttatgttttgttataaaa-taacttatatgtaagcacttgtatgata 38496659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 45777233 - 45777279
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||||||||| | |||||||| |||||||||||||    
T  45777233 caacttatagtttatatgaaaacagtttgacttaattttatcttttg 45777279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 46825095 - 46825061
Alignment:
Q  181 ttatatgaaaataatttgactttattttatctttt 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  46825095 ttatatgaaaacaatttgactttattttatctttt 46825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 1431394 - 1431455
Alignment:
Q  194 atttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||||| |||   ||   ||||||||||||||||||||||| |||||||||    
T  1431394 atttgactttattttatttttcattatggaaataacttatacataaacacttatatgataag 1431455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 216
Target Start/End: Complemental strand, 3635956 - 3635927
Alignment:
Q  187 gaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||||||||||||||||||||    
T  3635956 gaaaataatttgactttattttatcttttg 3635927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 5006582 - 5006639
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    ||||||||||| | |||||||||||||||||||||| || |  |||| ||||||||||    
T  5006582 ttatatgaaaacagtttgactttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 5373233 - 5373148
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||  |||||| |||||  || ||||||||||||||||||| || | ||||| | ||||||||| |||||  ||||||||    
T  5373233 caacttataacttatataaaaatgtttggactttattttatcttttgttatagaaatagcatatacataagcacttacatgataag 5373148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 7623135 - 7623078
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    |||||| |||| | || |||||||||||| |||||| || ||||||||||||||||||    
T  7623135 ttatataaaaagagttggactttattttaccttttgttataaaaataacttatacata 7623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 8445275 - 8445210
Alignment:
Q  189 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||| ||||| ||||||||||||||||| || ||||||| |||||| | || ||||| ||||||||    
T  8445275 aaatcatttgtctttattttatcttttgttataaaaatagcttataaacaagcacttatatgataa 8445210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 27548268 - 27548187
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||| ||| ||||||| |||| ||||||||||||||||||| ||   ||||| |||||| |||| ||||| || |||||    
T  27548268 cttatagcttaaatgaaaacaattagactttattttatcttttgctaaggaaatagcttatagataagcacttataagataa 27548187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 27626197 - 27626258
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaaca 242  Q
    |||||| | |||| ||||||||||||||| |||||| || | ||||| ||||||||||||||    
T  27626197 ttatataataatagtttgactttattttagcttttgatatagaaatagcttatacataaaca 27626258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 28178963 - 28178910
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacat 237  Q
    |||||||| ||| |||||||||||||||||||| || | ||||| |||||||||    
T  28178963 tatgaaaacaatatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 28613596 - 28613665
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||  |||||  |||| ||||| ||||| |||||||||||| || ||||||| |||||||||||    
T  28613596 caacttataacttatacaaaaacaatttaactttgttttatcttttgttataaaaatagcttatacataa 28613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 39551614 - 39551695
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||| ||||||||||| | ||| |||||| | ||||||||| || | ||||| ||||||| |||| |||| |||||||||    
T  39551614 ttatagcttatatgaaaacagttttactttagtatatcttttgttatagaaatagcttatacttaaatacttatatgataag 39551695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 40428559 - 40428518
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||| ||||||||||||||||| |||||||||||| ||||    
T  40428559 ttatagcttatatgaaaataatttaactttattttatttttt 40428518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 1373614 - 1373670
Alignment:
Q  182 tatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    |||||||||| | |||||||||| |||||||||||  | ||||||||||| ||||||    
T  1373614 tatatgaaaaaagtttgactttaatttatcttttgtcataaaaataacttttacata 1373670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 5269519 - 5269463
Alignment:
Q  189 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||||||||||||||||  || | |||||| ||||| |||| |||||    
T  5269519 aaataatttgactttattttatcttttattaaagaaataatttatatataagcactt 5269463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 14823938 - 14823982
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||    
T  14823938 tttattttatcttttgttacataaataacttatacctaagcactt 14823982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 15270945 - 15270989
Alignment:
Q  201 tttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||||||| |||| ||||||||||||| ||| |||||    
T  15270945 tttattttatcttttgttacataaataacttatacctaagcactt 15270989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 20476595 - 20476651
Alignment:
Q  193 aatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtat 249  Q
    ||||||| ||||||||||||||||  | | ||||||||||| |||| ||||||||||    
T  20476595 aatttgaatttattttatcttttgcaatagaaataacttatgcatacacacttgtat 20476651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 25507320 - 25507284
Alignment:
Q  209 atcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25507320 atcttttggtatagaaataacttatacataaacactt 25507284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 25558290 - 25558326
Alignment:
Q  209 atcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25558290 atcttttggtatagaaataacttatacataaacactt 25558326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 25558488 - 25558524
Alignment:
Q  209 atcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||| | |||||||||||||||||||||||    
T  25558488 atcttttggtatagaaataacttatacataaacactt 25558524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 31341177 - 31341133
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    |||||||||||||||||||||| || | ||||| |||||||||||    
T  31341177 tttgactttattttatcttttgttatacaaatagcttatacataa 31341133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 33894619 - 33894556
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||||| | |||||||| ||||||||||||| || | ||||| ||||||||||| |||||    
T  33894619 ttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcactt 33894556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 38010719 - 38010659
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttat 233  Q
    ||||||| ||||||||||| |||||| |||| |||||||||||| |  |||||||| ||||    
T  38010719 cttatagcttatatgaaaacaatttggctttgttttatcttttgttttaaaaataatttat 38010659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 39908059 - 39908099
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatctt 213  Q
    ||||||| |||||||| ||| ||||||||||||||||||||    
T  39908059 cttatagcttatatgataattatttgactttattttatctt 39908099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 3217263 - 3217336
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||| ||||| ||||||||    
T  3217263 ttatatgaaaataatttgactttattttatcttctcttacaaaaatagcttatacataagcacttatatgataa 3217336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 24836262 - 24836336
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||| || | |||||||||||||||||| ||||    
T  24836262 aacttatagtttatacgaaaacaatttgactttattttatcttttgttatagaaataacttatacataaatactt 24836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 29274295 - 29274376
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||| ||||||||||| |||||||||||||||||||||||| || | ||||| ||||||||||| || || |||||||||    
T  29274295 ttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagcatttctatgataag 29274376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 2027471 - 2027530
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataactta 232  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || ||||||| ||||    
T  2027471 cttataggttatatgaaaatagtttgactttattttatcttttgttataaaaatagctta 2027530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 32975961 - 32975905
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 251  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||||||| |||||    
T  32975961 tttgactttattttatattttgttacagaaataacttatacataaacacttatatga 32975905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 10452422 - 10452505
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    |||||||||| ||||||||||||| ||||| |||||||||| ||||| || | ||||| ||||||||||| ||||  |||||||    
T  10452422 caacttatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcactgatatgata 10452505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 8349737 - 8349813
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||| |||| ||||| |||||||||||||||||| || | |||||  ||||||| |||||||| |||||||||||    
T  8349737 ttatataaaaacaatttaactttattttatcttttgttagagaaatagtttatacacaaacacttatatgataagtg 8349813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 27595630 - 27595674
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  27595630 aacttacagcttatatgaaaataatttgactttattttatctttt 27595674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 4006722 - 4006647
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||| |||||| |||| ||||||||||||||||||| |||| || | ||||| ||||| ||||| |||||    
T  4006722 caacttatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcactt 4006647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Complemental strand, 10032576 - 10032493
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    ||||||| |||||||||| || |||| |||||||| | || ||| || ||||||| |||||||||||||| || ||||||||||    
T  10032576 cttatagcttatatgaaattagtttgcctttatttcacctattgttataaaaatagcttatacataaacatttatatgataagt 10032493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 7785808 - 7785866
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataactta 232  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||| | || |||||||    
T  7785808 ttatagcttatatgaaaagagtttgactttattttatcttttggtatataagtaactta 7785866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 22742371 - 22742305
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||| || | ||||| |||||| ||||    
T  22742371 cttatagcttatatgaaaacaatttgactttattttatcctttgttatacaaatagcttatagataa 22742305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 5328971 - 5328898
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| |||||  |||||||||||||||||||||| || | |||||||||| || ||| ||||| ||||||||    
T  5328971 ttatataaaaatggtttgactttattttatcttttgttatagaaataacttaaacgtaagcacttttatgataa 5328898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 28531627 - 28531688
Alignment:
Q  194 atttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||||||||||| || | ||||||||||||||  | ||||| |||||||||    
T  28531627 atttgactttattttatcttttgttatataaataacttatacaagagcacttttatgataag 28531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 2206592 - 2206532
Alignment:
Q  176 ataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttataca 236  Q
    |||| |||||| |||| ||||  |||||||||||||||||| || ||||||||||||||||    
T  2206592 atagcttatataaaaacaattatactttattttatcttttgttataaaaataacttataca 2206532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 2514709 - 2514625
Alignment:
Q  171 aacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||| | |||| ||| || |||||||||||||||||||||  || | ||||| ||||||||||| |||||  ||||||||    
T  2514709 aacttatagctcatataaaattagtttgactttattttatcttttattatagaaatagcttatacataagcacttacatgataag 2514625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 7714022 - 7713950
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||| |||||||||||||||||||||||| ||  ||| ||  |||||||||| | ||| |||||||    
T  7714022 ttatatgaaaacaatttgactttattttatcttttgttatgaaagtagtttatacataagctcttatatgata 7713950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 11340687 - 11340767
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||| || | || || |||||| |||| ||||| ||||    
T  11340687 caacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg 11340767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 20671938 - 20672002
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacactt 245  Q
    ||||| ||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| |||||    
T  20671938 ttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatcactt 20672002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 21959732 - 21959652
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||| ||||||| ||| || ||||||||||||||||||||| ||   ||||| ||||||| ||| ||||| ||||||||    
T  21959732 ttatagcttatatgcaaacaaattgactttattttatcttttgttatggaaatagcttatacttaagcacttctatgataa 21959652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 27693512 - 27693544
Alignment:
Q  181 ttatatgaaaataatttgactttattttatctt 213  Q
    |||||||||||||||||||||||||||||||||    
T  27693512 ttatatgaaaataatttgactttattttatctt 27693544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 28660160 - 28660236
Alignment:
Q  182 tatatgaaaataatttgacttt-attttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||| |||| ||||||||||| ||||||||||||   | |||||||| ||||| |||||||||| |||||||||||    
T  28660160 tatatcaaaacaatttgacttttattttatcttttatcataaaaataatttatatataaacacttatatgataagtg 28660236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 281913 - 281956
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||| ||||||||||| || |||||||||||||||||||||    
T  281913 cttatagcttatatgaaaacaagttgactttattttatcttttg 281956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 1497976 - 1497901
Alignment:
Q  183 atatgaaaataatttgactttattttatcttttgg-tacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||| | ||||||||||||||| ||||||| || ||||||| |||| |||||| |||||  ||||||||||    
T  1497976 atatgaaaacagtttgactttattttaccttttggttaaaaaaatagcttaaacataagcacttaaatgataagtg 1497901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 10400274 - 10400192
Alignment:
Q  173 cttataggttatatgaaaataatttgacttta-ttttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||| |||||||| || |||||||||||| |||||||||||  ||  |||||| |||||||||||||| || |||||||||    
T  10400274 cttatagcttatatgataacaatttgactttatttttatcttttatta-taaaatagcttatacataaacatttatatgataag 10400192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 27713504 - 27713469
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27713504 ttatatgaaaagaatttgactttattttatcttttg 27713469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 27857358 - 27857319
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttata 234  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  27857358 tttgactttattttatcttttgttacaaaagtaacttata 27857319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 32513821 - 32513759
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 244  Q
    ||||||| ||||| |||||||||||||||| ||||| || | ||||||||||| ||||||||||    
T  32513821 ttatatggaaatagtttgactttattttat-ttttgttatagaaataacttatgcataaacact 32513759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 1403000 - 1402958
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||| ||||||||||||| ||| ||||||||||||||||||    
T  1403000 ttatagcttatatgaaaatagtttaactttattttatcttttg 1402958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 2117411 - 2117365
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttg 216  Q
    |||||||||| ||||||||||||| ||||||||| ||||||| ||||    
T  2117411 caacttatagattatatgaaaatagtttgactttgttttatcctttg 2117365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 7354201 - 7354131
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatga 251  Q
    ||||||||||||| || || |||||||||||||||| || | |||||  |||||||| || ||||||||||    
T  7354201 ttatatgaaaatagttcgattttattttatcttttgttatagaaatagtttatacatgaaaacttgtatga 7354131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 9093621 - 9093687
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||| ||||| ||||| ||||| |||||||||||||||||| || | ||||| ||||| |||||    
T  9093621 cttatagcttatacgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataa 9093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 10749301 - 10749335
Alignment:
Q  181 ttatatgaaaataatttgactttattttatctttt 215  Q
    ||||||||||||||||| |||||||||||||||||    
T  10749301 ttatatgaaaataatttaactttattttatctttt 10749335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 24476599 - 24476541
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||||||||||||||| |||  ||||||||||||| || | ||||| |||||||||||    
T  24476599 ttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataa 24476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 28660833 - 28660879
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaata 227  Q
    ||||||||||||||||| |||||||||||||| ||| || |||||||    
T  28660833 ttatatgaaaataatttaactttattttatctattgttataaaaata 28660879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 31672544 - 31672614
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||||||| | |||||||||||||||| |||||  |   |||||  |||||||||||||||||||||||||    
T  31672544 tatgaaaacagtttgactttattttattttttgtcatggaaatagtttatacataaacacttgtatgataa 31672614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 244
Target Start/End: Original strand, 34429752 - 34429826
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacact 244  Q
    |||||||||| ||||| ||||| | || ||||||||||||||| ||  || | ||||||||||||||||| ||||    
T  34429752 caacttatagtttataagaaaacagttagactttattttatctcttattatagaaataacttatacataatcact 34429826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 2023725 - 2023778
Alignment:
Q  204 attttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    ||||||||||||| || | |||||||||||| || ||||||| |||||||||||    
T  2023725 attttatcttttgctatagaaataacttatatatgaacacttatatgataagtg 2023778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 2732312 - 2732341
Alignment:
Q  181 ttatatgaaaataatttgactttattttat 210  Q
    ||||||||||||||||||||||||||||||    
T  2732312 ttatatgaaaataatttgactttattttat 2732341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 3155181 - 3155100
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||||| ||| | ||||||||| ||||||||||||  | | | ||| ||||||||||| || || ||||||||    
T  3155181 cttataggttatatggaaacagtttgactttgttttatcttttgtaaaagagatagcttatacataaccatttatatgataa 3155100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 4325381 - 4325454
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    ||||||||||||| |||| || ||||||||| |||  || | |||||||||| |||||| ||||| ||||||||    
T  4325381 ttatatgaaaatagtttgtctctattttatcatttattatagaaataacttagacataagcacttatatgataa 4325454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 5554861 - 5554910
Alignment:
Q  204 attttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    ||||||||||||| || | ||||||||||||||||||||| | |||||||    
T  5554861 attttatcttttgttatagaaataacttatacataaacacgtatatgata 5554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 11363430 - 11363475
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||||    
T  11363430 caacttataacttacatgaaaataatttaactttattttatctttt 11363475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 2027891 - 2027931
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatac 235  Q
    |||||||||||||||||||||  |||||||||| |||||||    
T  2027891 tttgactttattttatcttttaatacaaaaatagcttatac 2027931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 2034512 - 2034579
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtat 249  Q
    |||||||||| || ||||||||||||||||| |||| |  ||||| | ||||||||||| |||||||||    
T  2034512 ttatatgaaagtagtttgactttattttatc-tttgttgtaaaaacagcttatacataagcacttgtat 2034579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 8420284 - 8420344
Alignment:
Q  195 tttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    ||||||||||||||||| |||  || | ||||||||| ||||||| ||||| |||||||||    
T  8420284 tttgactttattttatcatttattaaagaaataacttgtacataagcacttatatgataag 8420344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 9559620 - 9559672
Alignment:
Q  187 gaaaataatttgactttattttatcttttggtacaaaaataacttatacataa 239  Q
    ||||| ||||| | |||||||||||||||| || | |||||||||||||||||    
T  9559620 gaaaacaatttaaatttattttatcttttgctatagaaataacttatacataa 9559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 249
Target Start/End: Complemental strand, 29940789 - 29940725
Alignment:
Q  185 atgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtat 249  Q
    ||||||| || ||||||||||||||||||||| || | ||| | ||||||| ||| |||||||||    
T  29940789 atgaaaacaaattgactttattttatcttttgttatagaaaaagcttatacttaagcacttgtat 29940725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 33116578 - 33116538
Alignment:
Q  205 ttttatcttttggtacaaaaataacttatacataaacactt 245  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  33116578 ttttatcttttgttaaagaaataacttatacataaacactt 33116538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 256
Target Start/End: Complemental strand, 34405095 - 34405027
Alignment:
Q  188 aaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagt 256  Q
    |||| ||||||||||||||||| |||||  || | ||||| |||||| |||||||||| ||| ||||||    
T  34405095 aaaacaatttgactttattttaacttttattatagaaatagcttatagataaacacttatatcataagt 34405027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 1147 - 1219
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    |||||||| |||| |||||||||||||||||||||| || | ||||| ||||||||||| ||||| |||||||    
T  1147 ttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 1219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 2828 - 2756
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgata 253  Q
    |||||||| |||| |||||||||||||||||||||| || | ||||| ||||||||||| ||||| |||||||    
T  2828 ttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgata 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 51572 - 51508
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    |||||| | ||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||||    
T  51572 ttatagttgatatgaaaacaatttaactttattttatattttgttataaaaataacttatacata 51508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 219
Target Start/End: Original strand, 69016 - 69054
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggta 219  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  69016 ttatatgaaaataatttgactttattttatattttggta 69054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 34063 - 34104
Alignment:
Q  174 ttataggttatatgaaaataatttgactttattttatctttt 215  Q
    |||||| | |||||||||||||||||||||||||||||||||    
T  34063 ttatagttcatatgaaaataatttgactttattttatctttt 34104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 1786 - 1866
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||| || | || || |||||| |||| ||||| ||||    
T  1786 caacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg 1866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Original strand, 3876 - 3956
Alignment:
Q  170 caacttataggttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatg 250  Q
    ||||||||||  ||||||||||||| || |||||||||||||||||| || | || || |||||| |||| ||||| ||||    
T  3876 caacttatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttatatg 3956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 18440 - 18475
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttg 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18440 ttatatgaaaagaatttgactttattttatcttttg 18475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 9848 - 9922
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataag 255  Q
    |||||||||||   |||||||| ||||||| ||||| || | ||||||||||||||||| ||| | |||||||||    
T  9848 ttatatgaaaactttttgacttaattttattttttgttatagaaataacttatacataagcacctatatgataag 9922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 6713 - 6786
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||| |||||||||| | ||||| ||||| || | |||||  |||||||||| ||||| |||||||||||    
T  6713 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtg 6786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 10129 - 10158
Alignment:
Q  187 gaaaataatttgactttattttatcttttg 216  Q
    ||||||||||||||||||||||||||||||    
T  10129 gaaaataatttgactttattttatcttttg 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 20292 - 20235
Alignment:
Q  181 ttatatgaaaataatttgactttattttatcttttggtacaaaaataacttatacata 238  Q
    ||||||||||| |||||||| ||||||||| ||||  || | ||||||||||||||||    
T  20292 ttatatgaaaacaatttgacattattttatgttttattaaagaaataacttatacata 20235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 6563 - 6600
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttat 210  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  6563 cttatagcttatatgaaaatagtttgactttattttat 6600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 13583 - 13620
Alignment:
Q  173 cttataggttatatgaaaataatttgactttattttat 210  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  13583 cttatagcttatatgaaaatagtttgactttattttat 13620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 63366 - 63431
Alignment:
Q  189 aaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataa 254  Q
    |||| ||||| ||||||||||||||||| || ||||||| |||||| | || ||||| ||||||||    
T  63366 aaatcatttgtctttattttatcttttgttataaaaatagcttataaacaagcacttatatgataa 63431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 116632 - 116705
Alignment:
Q  184 tatgaaaataatttgactttattttatcttttggtacaaaaataacttatacataaacacttgtatgataagtg 257  Q
    |||||||| |||||||||| | ||||| ||||| || | |||||  |||||||||| ||||| |||||||||||    
T  116632 tatgaaaacaatttgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtg 116705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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