View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11835_low_98 (Length: 257)
Name: NF11835_low_98
Description: NF11835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11835_low_98 |
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Alignment Details
Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 22695880 - 22696031
Alignment:
| Q |
75 |
gccctaatgttatagatgagacatgcaattctactatatagatttcaccaatataataatgaccaaagaaaagtttccatcaccatcttctaatcgtcct |
174 |
Q |
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| T |
22695880 |
gccctaatgttatagatgagacatgcaattctactatatagatttcactaatataataatgatcaaagaaaagtttccatcaccatcttctaatcgtccc |
22695979 |
T |
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| Q |
175 |
gcaactagagcttctcgttctaagtatttgtacctcacgaggaaaaacaccg |
226 |
Q |
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||||||||||||||| ||||||||||| |||||||||| |||| | |||||| |
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| T |
22695980 |
gcaactagagcttcttgttctaagtatctgtacctcacaaggacagacaccg |
22696031 |
T |
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