View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11836_low_38 (Length: 263)
Name: NF11836_low_38
Description: NF11836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11836_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 258
Target Start/End: Complemental strand, 8418031 - 8417792
Alignment:
| Q |
19 |
agaactgataagatgtaacatattcgtattcggtctcaagctcaccttagctcactctctcaaggattgtaatgtcaacctactaatgtttttgtgcgaa |
118 |
Q |
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| T |
8418031 |
agaactgataagatgtaaaatattcgtattcggtctcaagcttaccttagctcactctctcaaggattgtaatgtcaacctaccaaagtttttgtccgaa |
8417932 |
T |
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| Q |
119 |
taaaatagcttggttggtcaaaagagtagtatgtggctggttcctgaagatggatgagttaaatttaatggagatggttttgatacaaattttggaggtt |
218 |
Q |
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| T |
8417931 |
taaaatagcttggttggtcaaaagagtagtatgtggctggttcctgaagatggatgagttaaatttaatggagatggttttgatacaaattttggaggtt |
8417832 |
T |
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| Q |
219 |
gtgcttgtgcaacgtgtggtggggttgtgcctttgcttct |
258 |
Q |
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| T |
8417831 |
gtgcttgtgcaacgtgtggtggggttgtgcttttgcttct |
8417792 |
T |
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