View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11837_high_19 (Length: 306)
Name: NF11837_high_19
Description: NF11837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11837_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 2245776 - 2245992
Alignment:
| Q |
1 |
agacttcctcagaatagaatgagagtttggcttggaacttatgaaactgctgaagctgcagcttatgcttatgatcgtgcagcttataagcttcgaggcg |
100 |
Q |
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| T |
2245776 |
agacttcctcagaatagaatgagagtttggcttggaacttatgaaactgctgaagctgcagcttatgcttatgatcgtgcagcttataagcttcgaggcg |
2245875 |
T |
|
| Q |
101 |
aatacgcgcgtttaaattttccaaatttgaaagatccaactaagttgggtttcggagattctactagattgaatgctttgaagaattctgttgatgctaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2245876 |
aatacgcgcgtttaaattttccaaatttgaaagatccaactaagttgggttttggagattctactagattgaatgctttgaagaattctgttgatgctaa |
2245975 |
T |
|
| Q |
201 |
aattcaagctatttgtc |
217 |
Q |
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||||||||||||||||| |
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| T |
2245976 |
aattcaagctatttgtc |
2245992 |
T |
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