View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11841_low_22 (Length: 242)

Name: NF11841_low_22
Description: NF11841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11841_low_22
NF11841_low_22
[»] chr2 (48 HSPs)
chr2 (1-224)||(17280969-17281187)
chr2 (182-224)||(39761436-39761478)
chr2 (176-223)||(7413211-7413258)
chr2 (182-224)||(12124543-12124585)
chr2 (182-224)||(28771580-28771622)
chr2 (183-224)||(10195683-10195724)
chr2 (183-224)||(10332296-10332337)
chr2 (183-224)||(21482540-21482581)
chr2 (183-224)||(25186263-25186304)
chr2 (183-224)||(39068729-39068770)
chr2 (183-224)||(43117211-43117252)
chr2 (185-225)||(29350065-29350105)
chr2 (184-224)||(29734691-29734731)
chr2 (182-225)||(20644002-20644045)
chr2 (181-224)||(24593373-24593416)
chr2 (185-224)||(32901382-32901421)
chr2 (185-224)||(35685082-35685121)
chr2 (178-224)||(5980221-5980267)
chr2 (190-224)||(12619350-12619384)
chr2 (182-224)||(15654890-15654932)
chr2 (182-224)||(18231494-18231536)
chr2 (182-224)||(19179071-19179113)
chr2 (182-224)||(20296419-20296461)
chr2 (183-225)||(20517021-20517063)
chr2 (179-225)||(22441172-22441218)
chr2 (182-224)||(24393243-24393285)
chr2 (183-225)||(28202296-28202338)
chr2 (183-224)||(3197100-3197141)
chr2 (184-225)||(5028856-5028897)
chr2 (183-224)||(9389467-9389508)
chr2 (182-223)||(9459079-9459120)
chr2 (186-223)||(11764386-11764423)
chr2 (184-225)||(13000685-13000726)
chr2 (183-224)||(27244656-27244697)
chr2 (183-224)||(28277697-28277738)
chr2 (183-224)||(33063985-33064026)
chr2 (183-224)||(34464430-34464471)
chr2 (183-224)||(40967392-40967433)
chr2 (184-225)||(44488030-44488071)
chr2 (181-225)||(2429013-2429057)
chr2 (184-224)||(6141220-6141260)
chr2 (188-224)||(9982629-9982665)
chr2 (184-224)||(12413493-12413533)
chr2 (184-224)||(12425553-12425593)
chr2 (184-224)||(16204838-16204878)
chr2 (184-224)||(20120742-20120782)
chr2 (184-224)||(36547256-36547296)
chr2 (184-224)||(42039211-42039251)
[»] chr7 (32 HSPs)
chr7 (182-225)||(37451257-37451300)
chr7 (182-225)||(8227347-8227390)
chr7 (181-225)||(34000259-34000303)
chr7 (183-218)||(42817558-42817593)
chr7 (190-224)||(34568354-34568388)
chr7 (183-224)||(25246770-25246811)
chr7 (183-224)||(39926559-39926600)
chr7 (183-223)||(16537558-16537598)
chr7 (183-223)||(16628064-16628104)
chr7 (182-222)||(46551869-46551909)
chr7 (181-224)||(4340124-4340167)
chr7 (182-224)||(5833040-5833082)
chr7 (182-224)||(26816685-26816727)
chr7 (175-225)||(35165524-35165574)
chr7 (182-224)||(48527188-48527230)
chr7 (183-224)||(4047785-4047825)
chr7 (183-224)||(5458092-5458133)
chr7 (183-224)||(22690057-22690098)
chr7 (183-224)||(35142170-35142211)
chr7 (183-220)||(42336069-42336106)
chr7 (183-224)||(44558795-44558836)
chr7 (179-216)||(48674597-48674634)
chr7 (183-223)||(1398419-1398459)
chr7 (189-225)||(1438119-1438155)
chr7 (184-224)||(3533029-3533069)
chr7 (184-224)||(3672573-3672613)
chr7 (184-224)||(8615023-8615063)
chr7 (184-224)||(21050243-21050283)
chr7 (180-216)||(23397636-23397672)
chr7 (183-223)||(24614694-24614734)
chr7 (184-224)||(24991781-24991821)
chr7 (184-224)||(46987086-46987126)
[»] chr8 (25 HSPs)
chr8 (182-225)||(10320494-10320537)
chr8 (183-225)||(19701364-19701406)
chr8 (181-220)||(35372123-35372162)
chr8 (183-224)||(23816789-23816830)
chr8 (183-224)||(37938494-37938535)
chr8 (177-221)||(28219856-28219900)
chr8 (185-224)||(29652219-29652258)
chr8 (190-224)||(11759031-11759065)
chr8 (182-224)||(19778063-19778105)
chr8 (183-225)||(28439958-28440000)
chr8 (183-221)||(41162662-41162700)
chr8 (182-224)||(42208490-42208532)
chr8 (182-224)||(42367727-42367769)
chr8 (183-224)||(6314344-6314385)
chr8 (195-224)||(8146142-8146171)
chr8 (183-224)||(8717496-8717537)
chr8 (183-224)||(17704012-17704053)
chr8 (183-224)||(27718915-27718956)
chr8 (183-224)||(33451370-33451411)
chr8 (183-224)||(37750020-37750061)
chr8 (184-224)||(8910002-8910042)
chr8 (183-219)||(17913932-17913968)
chr8 (184-224)||(18942918-18942958)
chr8 (184-224)||(30623293-30623333)
chr8 (178-222)||(37405786-37405830)
[»] chr4 (42 HSPs)
chr4 (183-224)||(8027418-8027459)
chr4 (183-225)||(18903778-18903820)
chr4 (183-225)||(32006499-32006541)
chr4 (182-223)||(2034117-2034158)
chr4 (183-224)||(14577528-14577569)
chr4 (182-223)||(18915068-18915109)
chr4 (184-225)||(30135140-30135181)
chr4 (183-224)||(36203235-36203276)
chr4 (184-224)||(15175141-15175181)
chr4 (184-224)||(16743305-16743345)
chr4 (183-223)||(33413352-33413392)
chr4 (184-224)||(34247440-34247480)
chr4 (184-224)||(38416057-38416097)
chr4 (185-224)||(12058320-12058359)
chr4 (182-225)||(18004463-18004506)
chr4 (183-225)||(7272519-7272561)
chr4 (185-219)||(9259515-9259549)
chr4 (190-224)||(12439670-12439704)
chr4 (186-224)||(22040652-22040690)
chr4 (190-224)||(42756127-42756161)
chr4 (191-225)||(46434780-46434814)
chr4 (184-225)||(470338-470379)
chr4 (183-224)||(7230279-7230320)
chr4 (183-224)||(17216150-17216191)
chr4 (182-223)||(18635528-18635569)
chr4 (183-224)||(19935182-19935223)
chr4 (183-224)||(20096291-20096332)
chr4 (183-224)||(21052578-21052619)
chr4 (184-225)||(34595956-34595997)
chr4 (184-225)||(36071144-36071185)
chr4 (183-224)||(43155078-43155119)
chr4 (183-224)||(44189008-44189049)
chr4 (185-224)||(1701609-1701649)
chr4 (176-224)||(7371569-7371617)
chr4 (183-223)||(14136090-14136130)
chr4 (184-224)||(20921863-20921903)
chr4 (180-224)||(26238599-26238643)
chr4 (184-224)||(28435269-28435309)
chr4 (184-220)||(35997999-35998035)
chr4 (183-223)||(38939556-38939596)
chr4 (184-224)||(50442768-50442808)
chr4 (184-224)||(56204947-56204987)
[»] chr3 (31 HSPs)
chr3 (183-224)||(37921019-37921060)
chr3 (177-224)||(8113583-8113630)
chr3 (182-224)||(47099056-47099098)
chr3 (183-224)||(48315045-48315086)
chr3 (183-223)||(11574252-11574292)
chr3 (184-223)||(3612204-3612243)
chr3 (181-224)||(12976623-12976666)
chr3 (182-225)||(22462310-22462353)
chr3 (178-225)||(31085002-31085049)
chr3 (181-224)||(35126290-35126333)
chr3 (185-224)||(54230120-54230159)
chr3 (190-224)||(4216420-4216454)
chr3 (183-225)||(5117207-5117249)
chr3 (183-225)||(7827507-7827549)
chr3 (183-225)||(7829895-7829937)
chr3 (178-223)||(30745225-30745271)
chr3 (190-224)||(45096032-45096066)
chr3 (183-225)||(48376834-48376876)
chr3 (183-225)||(53633637-53633679)
chr3 (183-224)||(1149090-1149131)
chr3 (183-224)||(7974533-7974574)
chr3 (183-224)||(16980375-16980416)
chr3 (186-227)||(44407676-44407717)
chr3 (183-224)||(46298076-46298117)
chr3 (182-223)||(46469275-46469316)
chr3 (183-224)||(52904164-52904205)
chr3 (183-223)||(20413774-20413814)
chr3 (184-224)||(30200826-30200866)
chr3 (185-225)||(41087572-41087612)
chr3 (184-224)||(55066621-55066661)
chr3 (184-220)||(55198882-55198918)
[»] chr1 (43 HSPs)
chr1 (183-224)||(13794529-13794570)
chr1 (181-224)||(24124851-24124894)
chr1 (178-225)||(33577923-33577970)
chr1 (190-224)||(10843342-10843376)
chr1 (183-224)||(31890770-31890811)
chr1 (183-224)||(41974760-41974801)
chr1 (183-224)||(44641526-44641567)
chr1 (183-223)||(7732421-7732461)
chr1 (184-224)||(24631839-24631879)
chr1 (181-225)||(34485874-34485918)
chr1 (184-224)||(49868011-49868051)
chr1 (181-224)||(19396212-19396255)
chr1 (193-224)||(42416812-42416843)
chr1 (182-224)||(17283949-17283991)
chr1 (180-222)||(23228518-23228560)
chr1 (182-224)||(38448887-38448929)
chr1 (179-225)||(41926817-41926863)
chr1 (183-224)||(9116893-9116934)
chr1 (191-224)||(9872126-9872159)
chr1 (182-223)||(17396706-17396747)
chr1 (184-225)||(17917158-17917199)
chr1 (183-224)||(19262928-19262969)
chr1 (183-224)||(24324421-24324462)
chr1 (183-224)||(26256110-26256151)
chr1 (183-224)||(30937474-30937515)
chr1 (183-224)||(34733399-34733440)
chr1 (183-224)||(35473951-35473992)
chr1 (183-224)||(40618909-40618950)
chr1 (183-224)||(47719128-47719169)
chr1 (183-224)||(49183172-49183213)
chr1 (183-224)||(52043272-52043313)
chr1 (189-225)||(2817393-2817429)
chr1 (184-224)||(3393589-3393629)
chr1 (181-225)||(10292933-10292977)
chr1 (183-223)||(12613179-12613219)
chr1 (184-224)||(23953168-23953207)
chr1 (182-222)||(26763566-26763606)
chr1 (177-225)||(32874409-32874457)
chr1 (184-224)||(34521211-34521251)
chr1 (181-224)||(34595868-34595912)
chr1 (184-224)||(34808584-34808624)
chr1 (182-222)||(47528470-47528510)
chr1 (183-223)||(51127912-51127952)
[»] scaffold0004 (1 HSPs)
scaffold0004 (181-224)||(91583-91626)
[»] chr6 (21 HSPs)
chr6 (177-224)||(4450255-4450302)
chr6 (182-224)||(12031-12073)
chr6 (183-224)||(18256882-18256923)
chr6 (184-225)||(24623337-24623378)
chr6 (184-224)||(22414469-22414509)
chr6 (184-223)||(9923240-9923279)
chr6 (183-225)||(8138478-8138520)
chr6 (183-225)||(10018399-10018440)
chr6 (182-224)||(30639447-30639489)
chr6 (190-224)||(33824887-33824921)
chr6 (180-225)||(6283932-6283977)
chr6 (172-225)||(6470636-6470689)
chr6 (183-224)||(8834929-8834970)
chr6 (184-225)||(22576160-22576201)
chr6 (183-224)||(29069482-29069523)
chr6 (183-224)||(32193880-32193921)
chr6 (184-225)||(33608337-33608378)
chr6 (177-225)||(9334000-9334048)
chr6 (177-225)||(20720801-20720849)
chr6 (177-225)||(24248158-24248206)
chr6 (181-225)||(34181534-34181578)
[»] chr5 (26 HSPs)
chr5 (185-224)||(18147719-18147758)
chr5 (176-223)||(19193560-19193607)
chr5 (183-224)||(11017175-11017216)
chr5 (183-224)||(12672262-12672303)
chr5 (183-224)||(40445982-40446023)
chr5 (181-224)||(3671215-3671258)
chr5 (179-222)||(26998046-26998089)
chr5 (187-225)||(4432119-4432157)
chr5 (182-224)||(21308967-21309009)
chr5 (182-224)||(21316880-21316922)
chr5 (183-225)||(22394034-22394076)
chr5 (183-225)||(23118071-23118113)
chr5 (182-224)||(27679496-27679538)
chr5 (183-224)||(7713531-7713572)
chr5 (183-224)||(8545010-8545051)
chr5 (183-224)||(16133086-16133127)
chr5 (183-224)||(17861978-17862019)
chr5 (183-224)||(36321515-36321556)
chr5 (183-224)||(36623195-36623236)
chr5 (183-224)||(39610362-39610403)
chr5 (187-223)||(13409553-13409589)
chr5 (193-225)||(16094066-16094098)
chr5 (183-223)||(17672322-17672362)
chr5 (183-223)||(20370152-20370192)
chr5 (181-225)||(26409250-26409294)
chr5 (185-225)||(33753984-33754024)
[»] scaffold0088 (1 HSPs)
scaffold0088 (183-224)||(48020-48061)
[»] scaffold0005 (1 HSPs)
scaffold0005 (183-224)||(239806-239847)
[»] scaffold0154 (1 HSPs)
scaffold0154 (182-224)||(10778-10820)
[»] scaffold0426 (1 HSPs)
scaffold0426 (177-225)||(5860-5908)
[»] scaffold0320 (1 HSPs)
scaffold0320 (184-224)||(15476-15516)
[»] scaffold0259 (1 HSPs)
scaffold0259 (183-223)||(19387-19427)
[»] scaffold0117 (1 HSPs)
scaffold0117 (176-224)||(18285-18333)


Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 17281187 - 17280969
Alignment:
Q  1 ctcatggtgttatctctcttgactctctgacaattggaattagagtcataattcagttaatttggtttagaagtggcggtagattcaagtgtacttgatc 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17281187 ctcatggtgttatctctcttgactctccgacaattggaattagagtcataattcagttaatttggttgagaagtggcggtagattcaagtgtacttgatc 17281088  T
Q  101 aaatacagtgaagtggaagattcatattatacttgaaaatgagattgttggagttaagttaagtgtgaatcaatagtgtttccgtgagtttagctcagtt 200  Q
    |||||      |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | |||| |||||||||||    
T  17281087 aaata-----tagtggaagattcatattatatttgaaaatgagattgttggagttaagttaagtgtgaatcaatagtgttctcatgagcttagctcagtt 17280993  T
Q  201 gataaggataatgcataatatatg 224  Q
    |||| | |||||| ||||||||||    
T  17280992 gatatgaataatgtataatatatg 17280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 39761436 - 39761478
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  39761436 ccgtgagtttagctcagttgataaggacaatgcataatatatg 39761478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 7413258 - 7413211
Alignment:
Q  176 gtgtttccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||||||    
T  7413258 gtgtttccgtgagcttagctcagttggtaaggacaatgcataatatat 7413211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 12124543 - 12124585
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  12124543 ccgtgagtttagctcagttggtaaggacaatgcataatatatg 12124585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 28771580 - 28771622
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  28771580 ccgtgagtttagctcagttggtaaggacaatgcataatatatg 28771622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 10195724 - 10195683
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  10195724 cgtgagcttagctcagttgatatggataatgcataatatatg 10195683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 10332337 - 10332296
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  10332337 cgtgagcttagctcagttgataaggacaatgcataatatatg 10332296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 21482581 - 21482540
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  21482581 cgtgagtttagctcagttggtaaggataatgtataatatatg 21482540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 25186304 - 25186263
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  25186304 cgtgagtttagctcagttgatatggacaatgcataatatatg 25186263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 39068770 - 39068729
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  39068770 cgtgagcttagctcagttgataaggacaatgcataatatatg 39068729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 43117252 - 43117211
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  43117252 cgtgagtttagctcagttggtaaggacaatgcataatatatg 43117211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 29350105 - 29350065
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  29350105 tgagcttagctcagttgttaaggataatgcataatatatgt 29350065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 29734691 - 29734731
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  29734691 gtgagtttagctcagttgatatggacaatgcataatatatg 29734731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 20644002 - 20644045
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||    
T  20644002 ccgtgaatttagctcagttggtaagaataatgcataatatatgt 20644045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 24593373 - 24593416
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||| |||||||||||| |||||| |||||||||||||||    
T  24593373 tccgtgagcttagctcagttggtaaggacaatgcataatatatg 24593416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 32901382 - 32901421
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  32901382 tgagtttagctcagttgatatggataatgcataaaatatg 32901421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 35685121 - 35685082
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  35685121 tgagtttagctcagttggtaaggacaatgcataatatatg 35685082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 5980221 - 5980267
Alignment:
Q  178 gtttccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||  |||||||||||||||||| |||||||||||||||    
T  5980221 gtttccttgagcatagctcagttgataaggacaatgcataatatatg 5980267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 12619350 - 12619384
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||| ||||||||||||||||||    
T  12619350 ttagctcagttgataatgataatgcataatatatg 12619384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 15654932 - 15654890
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||||||||||||| |||||    
T  15654932 ccgtgagcttagctcagttggtaaggataatgcataaaatatg 15654890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 18231536 - 18231494
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  18231536 ccgtgagcttagctcagttggtaaggacaatgcataatatatg 18231494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 19179113 - 19179071
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  19179113 ccgtgagcttagctcagttggtaaggacaatgcataatatatg 19179071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 20296419 - 20296461
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||    
T  20296419 ccgtgagcttagctcagttgataaggatattgcatattatatg 20296461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 20517021 - 20517063
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||| |||| | ||||||||||||||||    
T  20517021 cgtgagtttagctcagttggtaagaacaatgcataatatatgt 20517063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 22441172 - 22441218
Alignment:
Q  179 tttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||||||||    
T  22441172 tttccgtaagtttagctcagttgataaggacaatacatcatatatgt 22441218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 24393243 - 24393285
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  24393243 ccgtgagcttagctcagttgttaaggacaatgcataatatatg 24393285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 28202296 - 28202338
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  28202296 cgtgagcttagctcagttgatagggacaatgcataatatatgt 28202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 3197141 - 3197100
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  3197141 cgtgagtttagctcagttggtagggacaatgcataatatatg 3197100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 5028856 - 5028897
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||||||||||| |||| ||||||||||||||||    
T  5028856 gtgagcttagctcagttgattaggacaatgcataatatatgt 5028897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 9389467 - 9389508
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| |||| ||||||||||||||| ||||||||||    
T  9389467 cgtgagtttaactcaattgataaggataatgtataatatatg 9389508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 9459120 - 9459079
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||| |||||||||||||||| || ||||||||||||||    
T  9459120 ccgtgagcttagctcagttgataaagacaatgcataatatat 9459079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 11764386 - 11764423
Alignment:
Q  186 gagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  11764386 gagtttaactcagttgataagaataatgcataatatat 11764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 13000685 - 13000726
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||||||||| ||| |||||||||||||||||||    
T  13000685 gtgagcttagctcagttggtaaagataatgcataatatatgt 13000726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 27244656 - 27244697
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| ||| |||||||||||||||    
T  27244656 cgtgagcttagctcagttgatagggacaatgcataatatatg 27244697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 28277738 - 28277697
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||| ||||| |||||| |||||||||||||||    
T  28277738 cgtgagtttagcttagttggtaaggacaatgcataatatatg 28277697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 33063985 - 33064026
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| ||| |||||||||||||||    
T  33063985 cgtgagcttagctcagttgatatggacaatgcataatatatg 33064026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 34464471 - 34464430
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  34464471 cgtgagtttagctcagttggtatggacaatgcataatatatg 34464430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 40967433 - 40967392
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||| ||||||||||||||| |||||||||||||||    
T  40967433 cgtgagcttaactcagttgataaggacaatgcataatatatg 40967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 44488071 - 44488030
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  44488071 gtgagtttagttcagttggtaaggacaatgcataatatatgt 44488030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 2429013 - 2429057
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||| |||| ||||||| |||||| ||||||||||||||||    
T  2429013 tccgtgagcttagttcagttggtaaggacaatgcataatatatgt 2429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 6141220 - 6141260
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||| |||||||| |||||| |||||||||||||||    
T  6141220 gtgagtttatctcagttggtaaggacaatgcataatatatg 6141260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 9982629 - 9982665
Alignment:
Q  188 gtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  9982629 gtttaactcagttgataaggacaatgcataatatatg 9982665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 12413493 - 12413533
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||| ||| ||||||||||| |||||||||||||||    
T  12413493 gtgagtttatctcggttgataaggacaatgcataatatatg 12413533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 12425553 - 12425593
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||| ||| ||||||||||| |||||||||||||||    
T  12425553 gtgagtttatctcggttgataaggacaatgcataatatatg 12425593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 16204878 - 16204838
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| ||| ||||||||||||||| |||||||||||||||    
T  16204878 gtgagcttaactcagttgataaggacaatgcataatatatg 16204838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 20120782 - 20120742
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  20120782 gtgagcttagctcagttggtaaggacaatgcataatatatg 20120742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 36547296 - 36547256
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| ||||||||||| ||||||||||    
T  36547296 gtgagcttagctcagttggtaaggataatgtataatatatg 36547256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 42039211 - 42039251
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||| ||||| |||||| ||||||    
T  42039211 gtgagtttagctcagttgatatggatagtgcatattatatg 42039251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 225
Target Start/End: Complemental strand, 37451300 - 37451257
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37451300 ccgtgagtttagctcagttgataaggataatgcataatatatgt 37451257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 8227347 - 8227390
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  8227347 ccgtgagtttagctcagttgataaggacaatgcataatatatgt 8227390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 34000259 - 34000303
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||    
T  34000259 tccgtgagcttaactcagttgataaggataatgcataatatatgt 34000303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 42817558 - 42817593
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataa 218  Q
    ||||||||||||||||||||||||||||||||||||    
T  42817558 cgtgagtttagctcagttgataaggataatgcataa 42817593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 34568388 - 34568354
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||||||||||||||||    
T  34568388 ttagctcagttgataaggataatgcataatatatg 34568354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 25246770 - 25246811
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  25246770 cgtgagtttagctcagttgataaagacaatgcataatatatg 25246811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 39926600 - 39926559
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  39926600 cgtgagcttagctcagttgataaggacaatgcataatatatg 39926559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 16537598 - 16537558
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  16537598 cgtgagtttagctcagttggtagggataatgcataatatat 16537558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 16628064 - 16628104
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  16628064 cgtgagtttagctcagttggtagggataatgcataatatat 16628104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 46551909 - 46551869
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatata 222  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  46551909 ccgtgagtttaactcagttgataaggacaatgcataatata 46551869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 4340124 - 4340167
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||| |||||||||||| |||||| |||||||||||||||    
T  4340124 tccgtgagattagctcagttggtaaggacaatgcataatatatg 4340167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 5833040 - 5833082
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| || |||||||||||||||||||    
T  5833040 ccgtgagcttagctcagttggtagggataatgcataatatatg 5833082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 26816727 - 26816685
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| || |||||||||||||||||||    
T  26816727 ccgtgagcttagctcagttggtagggataatgcataatatatg 26816685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 35165524 - 35165574
Alignment:
Q  175 agtgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||||||||| |||||||||||| || ||| ||||||||||||    
T  35165524 agtgtctccgtgagtttaactcagttgataacgacaatacataatatatgt 35165574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 48527188 - 48527230
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||    
T  48527188 ccgtgagcttatctcagttgataaggacaatgcataatatatg 48527230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 4047785 - 4047825
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  4047785 cgtgagcttagctcagttgata-ggataatgcataatatatg 4047825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 5458133 - 5458092
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||| | |||||||||||||||    
T  5458133 cgtgagcttagctcagttgataagaacaatgcataatatatg 5458092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 22690098 - 22690057
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||| |||||||||||||||||    
T  22690098 cgtgagcttagctcagttgctaagaataatgcataatatatg 22690057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 35142211 - 35142170
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| ||| |||||||||||||||    
T  35142211 cgtgagcttagctcagttgatatggacaatgcataatatatg 35142170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 42336069 - 42336106
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataata 220  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  42336069 cgtgaatttagctcagttgataaggacaatgcataata 42336106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 44558836 - 44558795
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  44558836 cgtgagtttagctcagttggtatggacaatgcataatatatg 44558795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 48674634 - 48674597
Alignment:
Q  179 tttccgtgagtttagctcagttgataaggataatgcat 216  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  48674634 tttccgtgagtttaactcagttgataaggatattgcat 48674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 1398459 - 1398419
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| |||||||||||| |||||| ||||||||||||||    
T  1398459 cgtgagcttagctcagttggtaaggacaatgcataatatat 1398419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 1438155 - 1438119
Alignment:
Q  189 tttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  1438155 tttagctcagttgataaggataatgtataatagatgt 1438119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 3533069 - 3533029
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||  |||||| |||||||||||||||    
T  3533069 gtgagtttagctcagttagtaaggacaatgcataatatatg 3533029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 3672613 - 3672573
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||| ||| ||| |||||||||||    
T  3672613 gtgagtttagctcagttgatatggacaatacataatatatg 3672573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 8615023 - 8615063
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  8615023 gtgagcttagctcagttggtaaggacaatgcataatatatg 8615063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 21050283 - 21050243
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  21050283 gtgagcttagctcagttggtaaggacaatgcataatatatg 21050243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 23397672 - 23397636
Alignment:
Q  180 ttccgtgagtttagctcagttgataaggataatgcat 216  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  23397672 ttccgtgagcttagctcagttgataaggacaatgcat 23397636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 24614694 - 24614734
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||| ||||||||||| | ||||||||||||||||    
T  24614694 cgtgagtttaactcagttgataggaataatgcataatatat 24614734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 24991781 - 24991821
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  24991781 gtgagcttagctcagttggtaaggacaatgcataatatatg 24991821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 46987086 - 46987126
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  46987086 gtgagcttagctcagttggtaaggacaatgcataatatatg 46987126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 10320494 - 10320537
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  10320494 ccgtgagtttagctcagttgataagaataatgcataatatatgt 10320537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 19701406 - 19701364
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  19701406 cgtgagtttaactcagttgataaggataatgcataatatatgt 19701364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 35372162 - 35372123
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataata 220  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  35372162 tccgtgagtttagctcagttgataaggacaatgcataata 35372123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 23816789 - 23816830
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  23816789 cgtgagcttagctcagttggtaaggataatgcataatatatg 23816830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 37938494 - 37938535
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  37938494 cgtgagtttagctcagttggtatggataatgcataatatatg 37938535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 28219856 - 28219900
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatat 221  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||    
T  28219856 tgtttctgtgagcttagctcagttgttaaggataatgcataatat 28219900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 29652219 - 29652258
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  29652219 tgagtttagctcagttgataagaacaatgcataatatatg 29652258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 11759031 - 11759065
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||||| ||||||||||    
T  11759031 ttagctcagttgataaggataatgtataatatatg 11759065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 19778063 - 19778105
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  19778063 ccgtgagcttagctcagttggtaaggacaatgcataatatatg 19778105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 28439958 - 28440000
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||  ||||||||||| |||||||||||||||||||    
T  28439958 cgtgagtttaattcagttgataaagataatgcataatatatgt 28440000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 41162700 - 41162662
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatat 221  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  41162700 cgtgagattagctcagttgataaggacaatgcataatat 41162662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 42208532 - 42208490
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||| |||||| |||||||||||||||    
T  42208532 ccgtgaatttagctcagttggtaaggacaatgcataatatatg 42208490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 42367727 - 42367769
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| ||||||||||||||||| | |||||||||||||||    
T  42367727 ccgtgagcttagctcagttgataagaacaatgcataatatatg 42367769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 6314385 - 6314344
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| ||||||||| |||||    
T  6314385 cgtgagcttagctcagttgataaggacaatgcataaaatatg 6314344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 8146142 - 8146171
Alignment:
Q  195 tcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  8146142 tcagttgataaggataatgcataatatatg 8146171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 8717537 - 8717496
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  8717537 cgtgagtttagctcagttggtatggacaatgcataatatatg 8717496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 17704012 - 17704053
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  17704012 cgtgagcttagctcagttggtaaggacaatgcataatatatg 17704053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 27718956 - 27718915
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| ||| |||||||||||||||    
T  27718956 cgtgagcttagctcagttgatatggacaatgcataatatatg 27718915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 33451411 - 33451370
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| || |||||||||||||||||||    
T  33451411 cgtgagcttagctcagttggtatggataatgcataatatatg 33451370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 37750061 - 37750020
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||| | | |||||||||||||||    
T  37750061 cgtgagtttagctcagttgatatgaacaatgcataatatatg 37750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 8910042 - 8910002
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  8910042 gtgagcttagctcagttggtaaggacaatgcataatatatg 8910002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 17913932 - 17913968
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataat 219  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  17913932 cgtgagcttagctcagttgataaggataatacataat 17913968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 18942918 - 18942958
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| || |||||||||||||||||||    
T  18942918 gtgagcttagctcagttggtagggataatgcataatatatg 18942958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 30623293 - 30623333
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  30623293 gtgagcttagctcagttggtaaggacaatgcataatatatg 30623333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 37405786 - 37405830
Alignment:
Q  178 gtttccgtgagtttagctcagttgataaggataatgcataatata 222  Q
    ||||||||||| ||||||| ||||||||||| |||| ||||||||    
T  37405786 gtttccgtgagcttagctcggttgataaggacaatgtataatata 37405830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 8027459 - 8027418
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  8027459 cgtgagtttagctcagttggtaaggataatgcataatatatg 8027418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 18903820 - 18903778
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  18903820 cgtgagtttagctcagttgataaaaataatgcataatatatgt 18903778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 32006499 - 32006541
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  32006499 cgtgagtttagctcagttggtagggataatgcataatatatgt 32006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 2034158 - 2034117
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  2034158 ccgtgagtttagctcagttggtatggataatgcataatatat 2034117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 14577569 - 14577528
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  14577569 cgtgagtttagctcagttggtaaggacaatgcataatatatg 14577528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 18915109 - 18915068
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  18915109 ccgtgagtttagctcagttggtaaggacaatgcataatatat 18915068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 30135140 - 30135181
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  30135140 gtgagcttaactcagttgataaggataatgcataatatatgt 30135181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 36203235 - 36203276
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  36203235 cgtgagcttagctcagttgataaggacaatgcataatatatg 36203276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 15175141 - 15175181
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  15175141 gtgagtttagctcagttgataagaataatgtataatatatg 15175181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 16743345 - 16743305
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  16743345 gtgagcttagctcagttgatatggataatgcataatatatg 16743305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 33413392 - 33413352
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  33413392 cgtgaatttagctcagttgataaggacaatgcataatatat 33413352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 34247440 - 34247480
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||| |||||| |||||||||||||||    
T  34247440 gtgagtttagctcagttggtaaggacaatgcataatatatg 34247480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 38416057 - 38416097
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  38416057 gtgagcttagctcagttggtaaggataatgcataatatatg 38416097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 12058320 - 12058359
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  12058320 tgagtttagctcagtcggtaaggataatgcataatatatg 12058359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 18004463 - 18004506
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||    
T  18004463 ccgtgaatttagctcagttggtaagaataatgcataatatatgt 18004506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 7272519 - 7272561
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||||||||||||||||||| |||||| |||||||    
T  7272519 cgtgaatttagctcagttgataaggatattgcatattatatgt 7272561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 219
Target Start/End: Complemental strand, 9259549 - 9259515
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataat 219  Q
    |||||||||||||||||||||||| ||||||||||    
T  9259549 tgagtttagctcagttgataaggacaatgcataat 9259515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 12439670 - 12439704
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||||||||||||    
T  12439670 ttagctcagttgataaggacaatgcataatatatg 12439704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 22040652 - 22040690
Alignment:
Q  186 gagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  22040652 gagtttagctcagttgatatggacaatgcataatatatg 22040690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 42756161 - 42756127
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||||||||||||    
T  42756161 ttagctcagttgataaggacaatgcataatatatg 42756127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Complemental strand, 46434814 - 46434780
Alignment:
Q  191 tagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||||||||||| ||||||||||||||||    
T  46434814 tagctcagttgataaggacaatgcataatatatgt 46434780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 470379 - 470338
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  470379 gtgagcttagctcagttgataaagataatgtataatatatgt 470338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 7230279 - 7230320
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  7230279 cgtgagcttagctcagttggtaaggacaatgcataatatatg 7230320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 17216191 - 17216150
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| | ||||||||||||||| |||||||||||||||||    
T  17216191 cgtgagctaagctcagttgataagaataatgcataatatatg 17216150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 18635528 - 18635569
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||    
T  18635528 ccgtgagcttaactcagttgataaggacaatgcataatatat 18635569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 19935223 - 19935182
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  19935223 cgtgagtttagctcagttgataagaacaatgcataatctatg 19935182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 20096332 - 20096291
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| |||||||| || |||||||||||||||||||    
T  20096332 cgtgagtttaactcagttggtagggataatgcataatatatg 20096291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 21052619 - 21052578
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  21052619 cgtgagtttagctcagttggtatggataatacataatatatg 21052578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 34595997 - 34595956
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  34595997 gtgagtttaactcagttggtaaggacaatgcataatatatgt 34595956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 36071144 - 36071185
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||| ||||||| |||||| ||||||||||||||||    
T  36071144 gtgagtttaggtcagttggtaaggacaatgcataatatatgt 36071185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 43155078 - 43155119
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| || |||||||||||||||||||    
T  43155078 cgtgagcttagctcagttgttatggataatgcataatatatg 43155119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 44189049 - 44189008
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||  | |||||||||||||||||||    
T  44189049 cgtgagtttagctcagttggcatggataatgcataatatatg 44189008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 1701609 - 1701649
Alignment:
Q  185 tgagtttagctcagttgataaggat-aatgcataatatatg 224  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  1701609 tgagtttagttcagttgataaggataaatgcataatatatg 1701649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 7371617 - 7371569
Alignment:
Q  176 gtgtttccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||| |||||||| ||| ||||||||||||||| ||| |||||||||||    
T  7371617 gtgtctccgtgagcttaactcagttgataaggacaatacataatatatg 7371569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 14136090 - 14136130
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| |||||||||||||||| || ||||||||||||||    
T  14136090 cgtgagcttagctcagttgataaagacaatgcataatatat 14136130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 20921903 - 20921863
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||  |||||||||| ||||||||||    
T  20921903 gtgagtttagctcagttggcaaggataatgtataatatatg 20921863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 26238643 - 26238599
Alignment:
Q  180 ttccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| | |||||||||||||||||| |||||| ||||||||||    
T  26238643 ttccgtaaatttagctcagttgataagaataatgtataatatatg 26238599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 28435309 - 28435269
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||| || ||| |||||||||||||||    
T  28435309 gtgagtttagctcagttggtatggacaatgcataatatatg 28435269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 35997999 - 35998035
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataata 220  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  35997999 gtgagtttagctcagttgatatggacaatgcataata 35998035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 38939596 - 38939556
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| | ||||||| ||||||||||||||||||||||||    
T  38939596 cgtgagctaagctcagctgataaggataatgcataatatat 38939556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 50442808 - 50442768
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| || |||||||||||||||||||    
T  50442808 gtgagcttagctcagttggtagggataatgcataatatatg 50442768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 56204947 - 56204987
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||| |||||||| |||||| |||||||||||||||    
T  56204947 gtgagtttaactcagttggtaaggacaatgcataatatatg 56204987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 37921060 - 37921019
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  37921060 cgtgagtttagctcagttgatagggataatgcataatatatg 37921019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 8113630 - 8113583
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||| |||||||||||| |||||| |||||||||||||||    
T  8113630 tgtttccgtgagcttagctcagttggtaaggacaatgcataatatatg 8113583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 47099098 - 47099056
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  47099098 ccgtgagcttagctcagttgataagaataatgcataatatatg 47099056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 48315086 - 48315045
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  48315086 cgtgagcttagctcagttggtaaggataatgcataatatatg 48315045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 11574252 - 11574292
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  11574252 cgtgagcttaactcagttgataaggataatgcataatatat 11574292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 3612243 - 3612204
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||| ||||||||||||||| ||||||||||||||||||    
T  3612243 gtgagcttagctcagttgatatggataatgcataatatat 3612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 12976666 - 12976623
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||    
T  12976666 tccgtgagtttaactcagttgatagggacaatgcataatatatg 12976623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 22462310 - 22462353
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||| ||| ||||||||||||||| ||||||||||||||||    
T  22462310 ccgtgagcttaactcagttgataaggacaatgcataatatatgt 22462353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 31085002 - 31085049
Alignment:
Q  178 gtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| |||||||||| ||||||||||||||| | ||||||||||||||    
T  31085002 gtttacgtgagtttatctcagttgataaggacagtgcataatatatgt 31085049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 35126333 - 35126290
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||| |||||||| || |||||||||||||||||||    
T  35126333 tccgtgagtttaactcagttggtagggataatgcataatatatg 35126290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 54230159 - 54230120
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  54230159 tgagtttagctcagttggtaaggacaatgcataatatatg 54230120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 4216454 - 4216420
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||||||||||||    
T  4216454 ttagctcagttgataaggacaatgcataatatatg 4216420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 5117207 - 5117249
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||    
T  5117207 cgtgagcttagctcagttgataaggacaatacataatatatgt 5117249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 7827507 - 7827549
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  7827507 cgtgagtttaactcagttgatatggacaatgcataatatatgt 7827549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 7829895 - 7829937
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||| ||||||||||| ||| ||||||||||||||||    
T  7829895 cgtgagtttaactcagttgatatggacaatgcataatatatgt 7829937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 30745271 - 30745225
Alignment:
Q  178 gtttccgtgagtttagctcagttgataa-ggataatgcataatatat 223  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||    
T  30745271 gttttcgtgagtttagctcatttgataagggataatgcataatatat 30745225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 45096032 - 45096066
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||||||||||||    
T  45096032 ttagctcagttgataaggacaatgcataatatatg 45096066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 48376834 - 48376876
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| |||||||||||| ||| |||||||||||||||||||    
T  48376834 cgtgagcttagctcagttggtaaagataatgcataatatatgt 48376876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 53633679 - 53633637
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||| |||||||| |||||||||||||||||||||||    
T  53633679 cgtgagcttaactcagttggtaaggataatgcataatatatgt 53633637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 1149131 - 1149090
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  1149131 cgtgagcttagctcagttggtaaggacaatgcataatatatg 1149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 7974574 - 7974533
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| || |||||||||||||||||||    
T  7974574 cgtgagcttagctcagttggtatggataatgcataatatatg 7974533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 16980416 - 16980375
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  16980416 cgtgagcttagctcagttggtaaggacaatgcataatatatg 16980375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 44407717 - 44407676
Alignment:
Q  186 gagtttagctcagttgataaggataatgcataatatatgttg 227  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||    
T  44407717 gagtttagctcagttgatatggataatacattatatatgttg 44407676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 46298117 - 46298076
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |  |||||||||||||||||||    
T  46298117 cgtgagtttagctcagttggtttggataatgcataatatatg 46298076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 46469275 - 46469316
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||| |||||||||||| |||||| ||||||||||||||    
T  46469275 ccgtgagcttagctcagttggtaaggacaatgcataatatat 46469316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 52904205 - 52904164
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  52904205 cgtgaggttagctcagttggtaaggacaatgcataatatatg 52904164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 20413814 - 20413774
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| ||||||||||||||| ||||||| ||||||||||    
T  20413814 cgtgagcttagctcagttgatatggataatacataatatat 20413774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 30200826 - 30200866
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  30200826 gtgagcttagctcagttgctaaggacaatgcataatatatg 30200866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 41087572 - 41087612
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||| ||||| |||||| ||||||||||||||||    
T  41087572 tgagtttagcttagttggtaaggacaatgcataatatatgt 41087612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 55066661 - 55066621
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| || |||||||||||||||||||    
T  55066661 gtgagcttagctcagttggtacggataatgcataatatatg 55066621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 55198882 - 55198918
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataata 220  Q
    |||||||||||||||||| |||||| |||||||||||    
T  55198882 gtgagtttagctcagttggtaaggacaatgcataata 55198918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 13794570 - 13794529
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  13794570 cgtgagcttagctcagttgataaggataatgcataatatatg 13794529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 24124894 - 24124851
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||| |||||| |||||||||||||||    
T  24124894 tccgtgagtttagctcagttgttaaggacaatgcataatatatg 24124851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 33577923 - 33577970
Alignment:
Q  178 gtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||    
T  33577923 gtttccgtgagtttagctcagttgctaaggacaatgtataatatatgt 33577970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 10843376 - 10843342
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||||||||||||||||    
T  10843376 ttagctcagttgataaggataatgcataatatatg 10843342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 31890811 - 31890770
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  31890811 cgtgagtttagctcagttggtaaggacaatgcataatatatg 31890770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 41974760 - 41974801
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  41974760 cgtgagtttagttcagttgatagggataatgcataatatatg 41974801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 44641526 - 44641567
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||| ||| |||||||||||||||    
T  44641526 cgtgagtttagctcagttgatatggacaatgcataatatatg 44641567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 7732421 - 7732461
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  7732421 cgtgagtttagctcagttgatttggataatgcataatatat 7732461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 24631839 - 24631879
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  24631839 gtgagtttaactcagttggtaaggataatgcataatatatg 24631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 34485874 - 34485918
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||    
T  34485874 tccgtgagcttagctcagttgatggggataatgcataatatatgt 34485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 49868011 - 49868051
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  49868011 gtgagtttaactcagttgatatggataatgcataatatatg 49868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 19396255 - 19396212
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||| |||||||| || |||||||||||||||||||    
T  19396255 tccgtgagtttaactcagttggtagggataatgcataatatatg 19396212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 224
Target Start/End: Original strand, 42416812 - 42416843
Alignment:
Q  193 gctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||||||||||||||    
T  42416812 gctcagttgataaggataatgcataatatatg 42416843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 17283949 - 17283991
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  17283949 ccgtgagcttagctcagttggtaaggacaatgcataatatatg 17283991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 23228560 - 23228518
Alignment:
Q  180 ttccgtgagtttagctcagttgataaggataatgcataatata 222  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  23228560 ttccgtgagcttagctcagttggtaaggacaatgcataatata 23228518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 38448929 - 38448887
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| |||||| |||||||||||||||    
T  38448929 ccgtgagcttagctcagttggtaaggacaatgcataatatatg 38448887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 41926817 - 41926863
Alignment:
Q  179 tttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| ||||| |||||||||||| |||||| ||||||||||||||||    
T  41926817 tttctgtgagcttagctcagttggtaaggacaatgcataatatatgt 41926863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 9116934 - 9116893
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| ||||||||||| ||| |||||||||||||||    
T  9116934 cgtgagtttaactcagttgatatggacaatgcataatatatg 9116893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 9872159 - 9872126
Alignment:
Q  191 tagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||| ||||||||||||||||||||||    
T  9872159 tagctcagttggtaaggataatgcataatatatg 9872126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 17396706 - 17396747
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||    
T  17396706 ccgtgagcttagctcagttgacaaggacaatgcataatatat 17396747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 17917199 - 17917158
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||    
T  17917199 gtgagtttagctcagttgatatggacaatgcataaaatatgt 17917158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 19262969 - 19262928
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| ||||||||| |||||    
T  19262969 cgtgagcttagctcagttgataaggacaatgcataacatatg 19262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 24324462 - 24324421
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||| ||||||||| |||||||||||||||    
T  24324462 cgtgagcttagctcaggtgataaggacaatgcataatatatg 24324421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 26256151 - 26256110
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||| |||||||||||||| ||||||||||||||||    
T  26256151 cgtgagcttaactcagttgataagggtaatgcataatatatg 26256110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 30937474 - 30937515
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||| |||||||||||| |||| ||||||||||    
T  30937474 cgtgagtttagcttagttgataaggacaatgtataatatatg 30937515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 34733399 - 34733440
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  34733399 cgtgagcttagctcagttggtaaggacaatgcataatatatg 34733440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 35473951 - 35473992
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||| ||| ||||||||||||||||||||||    
T  35473951 cgtgagcttagctcaattggtaaggataatgcataatatatg 35473992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 40618909 - 40618950
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| |||||||| ||| ||||||||||||||||||    
T  40618909 cgtgagtttaactcagttggtaaagataatgcataatatatg 40618950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 47719169 - 47719128
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||| |||||||| ||||||||||||||||||||||    
T  47719169 cgtgagcttaactcagttggtaaggataatgcataatatatg 47719128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 49183172 - 49183213
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||| ||| |||||||||||    
T  49183172 cgtgagtttagctcagttggtaaggacaatacataatatatg 49183213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 52043272 - 52043313
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||||||||||||| |||||    
T  52043272 cgtgagtttagctcagttggtatggataatgcataaaatatg 52043313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Complemental strand, 2817429 - 2817393
Alignment:
Q  189 tttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  2817429 tttagctcagttggtaaggacaatgcataatatatgt 2817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 3393629 - 3393589
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||| | | |||||||||||||||    
T  3393629 gtgagtttagctcagttgatatgaacaatgcataatatatg 3393589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 10292933 - 10292977
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||| ||| ||||||||||| ||| ||||||||||||||||    
T  10292933 tccgtgagcttaactcagttgatagggacaatgcataatatatgt 10292977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 12613179 - 12613219
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||||||||||||||| || | ||||||||||||||||    
T  12613179 cgtgagtttagctcagttggtatgaataatgcataatatat 12613219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 23953207 - 23953168
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  23953207 gtgagtttagctcagttgatatgga-aatgcataatatatg 23953168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 26763606 - 26763566
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatata 222  Q
    ||||||| ||||||||||||||||| | |||||||||||||    
T  26763606 ccgtgagcttagctcagttgataagaacaatgcataatata 26763566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 32874457 - 32874409
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| |||| ||||||||||||||| |||||  ||||||||||||||||    
T  32874457 tgttcccgtaagtttagctcagttggtaagggcaatgcataatatatgt 32874409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 34521251 - 34521211
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||| || ||| |||||||||||||||    
T  34521251 gtgagtttagctcagttggtatggacaatgcataatatatg 34521211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 34595868 - 34595912
Alignment:
Q  181 tccgtgagtttagctcagttga-taaggataatgcataatatatg 224  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||    
T  34595868 tccgtgagcttagttcagttgactaaggataatgcataatatatg 34595912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 34808624 - 34808584
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  34808624 gtgagcttagctcagttgttaaggacaatgcataatatatg 34808584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 47528510 - 47528470
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatata 222  Q
    ||||||| |||||||||||| |||||| |||||||||||||    
T  47528510 ccgtgagcttagctcagttggtaaggacaatgcataatata 47528470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 51127952 - 51127912
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||||||||||| ||| ||| ||||||||||||||    
T  51127952 cgtgagtttagctcagttaatatggacaatgcataatatat 51127912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 91626 - 91583
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||| |||||||||||| ||||||||||||||||||||||    
T  91626 tccgtgagcttagctcagttgttaaggataatgcataatatatg 91583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4450255 - 4450302
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||    
T  4450255 tgtttccgtgagcttagctcagttgataaagacaatgcataatatatg 4450302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 12073 - 12031
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  12073 ccgtgagtttagctcagttgatagagataatgcataatatatg 12031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 18256882 - 18256923
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  18256882 cgtgagcttagctcagttgataaggacaatgcataatatatg 18256923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 24623378 - 24623337
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||| ||| ||||||||||||||||    
T  24623378 gtgagtttagctcagttgatatggacaatgcataatatatgt 24623337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 22414509 - 22414469
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  22414509 gtgagtttagctcagttagtaaggataatgcataatatatg 22414469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 223
Target Start/End: Original strand, 9923240 - 9923279
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  9923240 gtgagtttagctcaattgataaggacaatgcataatatat 9923279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 8138520 - 8138478
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||||||||||||||| | ||||||||||||||||    
T  8138520 cgtgaatttagctcagttgataagaacaatgcataatatatgt 8138478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 10018399 - 10018440
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  10018399 cgtgagtttagctcagttggta-ggataatgcataatatatgt 10018440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 30639489 - 30639447
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||| || | |||||||||||||||||    
T  30639489 ccgtgagtttagctcagttggtaggaataatgcataatatatg 30639447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Original strand, 33824887 - 33824921
Alignment:
Q  190 ttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||||||||||||    
T  33824887 ttagctcagttgataaggacaatgcataatatatg 33824921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 6283932 - 6283977
Alignment:
Q  180 ttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||||    
T  6283932 ttccgtaagtttagctcaattgataagaacaatgcataatatatgt 6283977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 6470689 - 6470636
Alignment:
Q  172 aatagtgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| ||| |||||||| ||| |||||||||||| || ||||||||||||||||    
T  6470689 aatattgtctccgtgagcttaactcagttgataaagacaatgcataatatatgt 6470636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 8834929 - 8834970
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||| |||||||||||||||||||||||||| ||||    
T  8834929 cgtgagcttaactcagttgataaggataatgcataatgtatg 8834970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 22576160 - 22576201
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||||||||||| |||||| |||| |||||||||||    
T  22576160 gtgagtttagctcagttggtaaggacaatgaataatatatgt 22576201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 29069482 - 29069523
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| ||| |||||||||||||||    
T  29069482 cgtgagcttagctcagttgatagggacaatgcataatatatg 29069523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 32193921 - 32193880
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||| | |||||||||||||||    
T  32193921 cgtgagtttagctcagttggtaagaacaatgcataatatatg 32193880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 33608337 - 33608378
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||| ||||||||||||||| |||| |||||||||||    
T  33608337 gtgagtttatctcagttgataaggacaatgtataatatatgt 33608378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 9334048 - 9334000
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| |||| |||||| ||||||||| ||||| ||||||||||||||||    
T  9334048 tgttcccgtaagtttaactcagttgacaaggacaatgcataatatatgt 9334000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 20720849 - 20720801
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||| |||||| |||||||||||| || ||| ||||||||||||||||    
T  20720849 tgttttcgtgagcttagctcagttgttatggacaatgcataatatatgt 20720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 24248158 - 24248206
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| ||||||| ||||| |||||| |||||||||| ||||||||||||    
T  24248158 tgttcccgtgagcttagcacagttggtaaggataatacataatatatgt 24248206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 34181578 - 34181534
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||||| |||||||||||| |||| |||||| |||||||    
T  34181578 tccgtgagtttaactcagttgataacgatattgcatattatatgt 34181534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 18147719 - 18147758
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  18147719 tgagtttagctcagttgataaggacaatgcataatatatg 18147758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 19193607 - 19193560
Alignment:
Q  176 gtgtttccgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  19193607 gtgtttccgtgaggttagctcaggtgataaggacaatgcataatatat 19193560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 11017175 - 11017216
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  11017175 cgtgagtttagctcagttggtagggataatgcataatatatg 11017216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 12672303 - 12672262
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  12672303 cgtgagtttaactaagttgataaggataatgcataatatatg 12672262  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 40445982 - 40446023
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| ||||||||||||||| |||||||||||||||    
T  40445982 cgtgagtttaactcagttgataaggacaatgcataatatatg 40446023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 3671215 - 3671258
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||    
T  3671215 tccgtgagcttaactcagttgataaggataatgtataatatatg 3671258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 26998046 - 26998089
Alignment:
Q  179 tttccgtgagtttagctcagttgataaggataatgcataatata 222  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||    
T  26998046 tttccgtgaatttagttcagttgataaggacaatgcataatata 26998089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 4432119 - 4432157
Alignment:
Q  187 agtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  4432119 agtttaactcagttgataaggacaatgcataatatatgt 4432157  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 21308967 - 21309009
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||| |||||||| |||||| |||||||||||||||    
T  21308967 ccgtgagtttaactcagttggtaaggacaatgcataatatatg 21309009  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 21316880 - 21316922
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||| |||||||| |||||| |||||||||||||||    
T  21316880 ccgtgagtttaactcagttggtaaggacaatgcataatatatg 21316922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 22394034 - 22394076
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  22394034 cgtgagcttagctcagttgatatggacaatgcataatatatgt 22394076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 23118113 - 23118071
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||| ||| ||||||||||||||| ||||||||||||||||    
T  23118113 cgtgagcttaactcagttgataaggacaatgcataatatatgt 23118071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 27679496 - 27679538
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||    
T  27679496 ccgtgagcttagctcagttggtaaagataatgcataatatatg 27679538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 7713531 - 7713572
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| ||||||||||| | |||||||||||||||||    
T  7713531 cgtgagtttaactcagttgatatgaataatgcataatatatg 7713572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 8545051 - 8545010
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||| ||||||||||||||| |||||||||||||||    
T  8545051 cgtgagcttaactcagttgataaggacaatgcataatatatg 8545010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 16133127 - 16133086
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  16133127 cgtgagcttagctcagttggtaaggacaatgcataatatatg 16133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 17861978 - 17862019
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| || ||| |||||||||||||||    
T  17861978 cgtgagtttagctcagttggtagggacaatgcataatatatg 17862019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 36321556 - 36321515
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  36321556 cgtgagcttagctcagttggtaaggacaatgcataatatatg 36321515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 36623236 - 36623195
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||| ||||||||||||| |||||||||||||||||    
T  36623236 cgtgagcttaactcagttgataagaataatgcataatatatg 36623195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 224
Target Start/End: Complemental strand, 39610403 - 39610362
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||| ||||||||||||||| ||| |||||||||||||||    
T  39610403 cgtgagcttagctcagttgatatggacaatgcataatatatg 39610362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 13409553 - 13409589
Alignment:
Q  187 agtttagctcagttgataaggataatgcataatatat 223  Q
    |||||||||||||||||||| | ||||||||||||||    
T  13409553 agtttagctcagttgataagaacaatgcataatatat 13409589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 16094066 - 16094098
Alignment:
Q  193 gctcagttgataaggataatgcataatatatgt 225  Q
    |||||||||||| ||||||||||||||||||||    
T  16094066 gctcagttgatagggataatgcataatatatgt 16094098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 17672362 - 17672322
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| |||||||||||||||||||  |||||||||||||    
T  17672362 cgtgagcttagctcagttgataaggacgatgcataatatat 17672322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 20370192 - 20370152
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    |||||| |||||||||||| || ||||||||||||||||||    
T  20370192 cgtgagcttagctcagttggtagggataatgcataatatat 20370152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 26409250 - 26409294
Alignment:
Q  181 tccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||||||| |||||||||||| || ||| ||||||||||||||||    
T  26409250 tccgtgagcttagctcagttggtatggacaatgcataatatatgt 26409294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 33754024 - 33753984
Alignment:
Q  185 tgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    ||||||||||||||||||||| || |||| |||||||||||    
T  33754024 tgagtttagctcagttgataaagacaatgtataatatatgt 33753984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 48020 - 48061
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| ||||||||||||| |||||||||||||||||    
T  48020 cgtgagtttaactcagttgataagcataatgcataatatatg 48061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 224
Target Start/End: Original strand, 239806 - 239847
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  239806 cgtgagtttagctcagttggtaaggacaatgcataatatatg 239847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 10820 - 10778
Alignment:
Q  182 ccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||||||||||||| |||||| ||||||||| |||||    
T  10820 ccgtgagtttagctcagttggtaaggacaatgcataaaatatg 10778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 5908 - 5860
Alignment:
Q  177 tgtttccgtgagtttagctcagttgataaggataatgcataatatatgt 225  Q
    |||| ||||||| ||||||||||||| ||| |||||| |||||||||||    
T  5908 tgttcccgtgagcttagctcagttgaaaagaataatgtataatatatgt 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 15516 - 15476
Alignment:
Q  184 gtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||||||||| |||||| ||||||| |||||||||||||||    
T  15516 gtgagtttagttcagttaataaggacaatgcataatatatg 15476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 19387 - 19427
Alignment:
Q  183 cgtgagtttagctcagttgataaggataatgcataatatat 223  Q
    ||||||||||| ||||||| |||||| ||||||||||||||    
T  19387 cgtgagtttagatcagttggtaaggacaatgcataatatat 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 18285 - 18333
Alignment:
Q  176 gtgtttccgtgagtttagctcagttgataaggataatgcataatatatg 224  Q
    |||| |||||||| |||||||||||| |||||| |||| ||||||||||    
T  18285 gtgtctccgtgagcttagctcagttggtaaggacaatgtataatatatg 18333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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