View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11843_high_12 (Length: 212)

Name: NF11843_high_12
Description: NF11843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11843_high_12
NF11843_high_12
[»] chr4 (48 HSPs)
chr4 (51-196)||(22365154-22365290)
chr4 (1-38)||(4700885-4700922)
chr4 (1-38)||(13564215-13564252)
chr4 (1-38)||(37935947-37935984)
chr4 (1-38)||(45312204-45312241)
chr4 (1-38)||(48569123-48569160)
chr4 (1-38)||(48949715-48949752)
chr4 (2-37)||(43905796-43905831)
chr4 (5-38)||(2222629-2222662)
chr4 (1-34)||(2629664-2629697)
chr4 (1-38)||(2688181-2688218)
chr4 (5-38)||(3036002-3036035)
chr4 (1-38)||(4590332-4590369)
chr4 (5-38)||(5304957-5304990)
chr4 (5-38)||(6371204-6371237)
chr4 (5-38)||(7686209-7686242)
chr4 (5-38)||(10141073-10141106)
chr4 (5-38)||(10402531-10402564)
chr4 (5-38)||(12581975-12582008)
chr4 (1-38)||(19963868-19963905)
chr4 (5-38)||(21380125-21380158)
chr4 (5-38)||(26919415-26919448)
chr4 (1-38)||(29356362-29356399)
chr4 (1-34)||(31852434-31852467)
chr4 (5-38)||(33530883-33530916)
chr4 (5-38)||(35948130-35948163)
chr4 (5-38)||(37719090-37719123)
chr4 (1-38)||(38228522-38228559)
chr4 (5-38)||(40051712-40051745)
chr4 (5-38)||(40994050-40994083)
chr4 (1-38)||(42218836-42218873)
chr4 (5-38)||(43147331-43147364)
chr4 (5-38)||(43596985-43597018)
chr4 (1-38)||(44602563-44602600)
chr4 (1-38)||(45126218-45126255)
chr4 (1-38)||(45849133-45849170)
chr4 (5-38)||(46774977-46775010)
chr4 (1-38)||(47934019-47934056)
chr4 (1-38)||(48744293-48744330)
chr4 (5-38)||(48950874-48950907)
chr4 (1-38)||(49447207-49447244)
chr4 (5-38)||(49757231-49757264)
chr4 (5-38)||(49901572-49901605)
chr4 (5-38)||(52731386-52731419)
chr4 (5-38)||(53634198-53634231)
chr4 (5-38)||(54015821-54015854)
chr4 (5-38)||(55536469-55536502)
chr4 (6-38)||(55853055-55853087)
[»] chr2 (29 HSPs)
chr2 (1-38)||(28692432-28692469)
chr2 (1-38)||(19612793-19612830)
chr2 (1-38)||(29772225-29772262)
chr2 (1-38)||(38387741-38387778)
chr2 (1-38)||(41566848-41566885)
chr2 (5-38)||(1260274-1260307)
chr2 (5-38)||(1309073-1309106)
chr2 (5-38)||(1844907-1844940)
chr2 (1-38)||(3287004-3287041)
chr2 (1-38)||(5613040-5613077)
chr2 (5-38)||(6331651-6331684)
chr2 (5-38)||(11190018-11190051)
chr2 (1-38)||(14215968-14216005)
chr2 (1-38)||(15069746-15069783)
chr2 (5-38)||(17499039-17499072)
chr2 (5-38)||(18694875-18694908)
chr2 (5-38)||(19281698-19281731)
chr2 (5-38)||(20296508-20296541)
chr2 (5-38)||(27449273-27449306)
chr2 (5-38)||(33228880-33228913)
chr2 (5-38)||(36005532-36005565)
chr2 (1-38)||(37063598-37063635)
chr2 (5-38)||(38400404-38400437)
chr2 (5-38)||(40535396-40535429)
chr2 (5-38)||(41509606-41509639)
chr2 (5-38)||(44822514-44822547)
chr2 (1-38)||(44857181-44857218)
chr2 (5-37)||(19253996-19254028)
chr2 (1-37)||(30390317-30390353)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-38)||(3961-3998)
[»] chr8 (46 HSPs)
chr8 (1-38)||(8265354-8265391)
chr8 (1-38)||(16432075-16432112)
chr8 (1-38)||(16449211-16449248)
chr8 (1-38)||(23178838-23178875)
chr8 (1-38)||(39169571-39169608)
chr8 (3-38)||(22274559-22274594)
chr8 (5-38)||(257629-257662)
chr8 (5-38)||(658258-658291)
chr8 (5-38)||(843994-844027)
chr8 (5-38)||(1937400-1937433)
chr8 (5-38)||(2787028-2787061)
chr8 (5-38)||(6659379-6659412)
chr8 (5-38)||(6739781-6739814)
chr8 (5-38)||(7816493-7816526)
chr8 (5-38)||(9187170-9187203)
chr8 (5-38)||(10568175-10568208)
chr8 (5-38)||(10736821-10736854)
chr8 (5-38)||(11127992-11128025)
chr8 (1-38)||(13647404-13647441)
chr8 (1-38)||(13747829-13747866)
chr8 (5-38)||(17027828-17027861)
chr8 (5-38)||(17072510-17072543)
chr8 (5-38)||(17558264-17558297)
chr8 (5-38)||(17575728-17575761)
chr8 (5-38)||(17698612-17698645)
chr8 (1-38)||(24458402-24458439)
chr8 (5-38)||(28420371-28420404)
chr8 (5-38)||(28909555-28909588)
chr8 (5-38)||(29514716-29514749)
chr8 (1-38)||(29729205-29729242)
chr8 (5-38)||(29733952-29733985)
chr8 (5-38)||(31450904-31450937)
chr8 (5-38)||(33838414-33838447)
chr8 (5-38)||(34266102-34266135)
chr8 (5-38)||(37717453-37717486)
chr8 (5-38)||(38219515-38219548)
chr8 (5-38)||(39587637-39587670)
chr8 (5-38)||(43186943-43186976)
chr8 (1-38)||(43656122-43656159)
chr8 (1-34)||(43847020-43847053)
chr8 (5-37)||(3189907-3189939)
chr8 (2-38)||(6280567-6280603)
chr8 (5-37)||(10761909-10761941)
chr8 (5-37)||(29260709-29260741)
chr8 (5-37)||(31152967-31152999)
chr8 (5-37)||(34894459-34894491)
[»] chr7 (34 HSPs)
chr7 (1-38)||(9697838-9697875)
chr7 (1-38)||(13720856-13720893)
chr7 (1-38)||(15238975-15239012)
chr7 (1-38)||(19331447-19331484)
chr7 (1-38)||(27424924-27424961)
chr7 (1-38)||(48119556-48119593)
chr7 (1-38)||(48719885-48719922)
chr7 (5-38)||(3062864-3062897)
chr7 (5-38)||(4960874-4960907)
chr7 (1-38)||(5804941-5804978)
chr7 (5-38)||(10244836-10244869)
chr7 (5-38)||(12640536-12640569)
chr7 (5-38)||(12772205-12772238)
chr7 (1-34)||(12935825-12935858)
chr7 (1-38)||(19752915-19752952)
chr7 (1-38)||(21066971-21067008)
chr7 (5-38)||(21762839-21762872)
chr7 (5-38)||(24781120-24781153)
chr7 (5-38)||(24880399-24880432)
chr7 (1-38)||(25833641-25833678)
chr7 (5-38)||(26801676-26801709)
chr7 (5-38)||(27510204-27510237)
chr7 (5-38)||(28547728-28547761)
chr7 (5-38)||(29617495-29617528)
chr7 (5-38)||(31026309-31026342)
chr7 (5-38)||(32619440-32619473)
chr7 (5-38)||(35645689-35645722)
chr7 (5-38)||(35950218-35950251)
chr7 (1-38)||(36469652-36469689)
chr7 (1-38)||(38889440-38889477)
chr7 (5-38)||(43119379-43119412)
chr7 (5-38)||(47255037-47255070)
chr7 (5-38)||(47999870-47999903)
chr7 (5-37)||(24508916-24508948)
[»] chr6 (36 HSPs)
chr6 (1-38)||(3795721-3795758)
chr6 (1-38)||(7425452-7425489)
chr6 (1-35)||(20729037-20729071)
chr6 (1-38)||(30253-30290)
chr6 (5-38)||(2816980-2817013)
chr6 (1-38)||(3012670-3012707)
chr6 (1-38)||(3640600-3640637)
chr6 (5-38)||(3794120-3794153)
chr6 (1-38)||(4408436-4408473)
chr6 (5-38)||(5052021-5052054)
chr6 (5-38)||(7207934-7207967)
chr6 (5-38)||(7328594-7328627)
chr6 (1-38)||(7414410-7414447)
chr6 (1-38)||(7418364-7418401)
chr6 (5-38)||(7581134-7581167)
chr6 (5-38)||(8857173-8857206)
chr6 (1-38)||(9435712-9435749)
chr6 (5-38)||(9704506-9704539)
chr6 (5-38)||(10517289-10517322)
chr6 (5-38)||(13116571-13116604)
chr6 (1-38)||(15963890-15963927)
chr6 (1-38)||(19892223-19892260)
chr6 (5-38)||(19953775-19953808)
chr6 (1-38)||(26347490-26347527)
chr6 (5-38)||(27218974-27219007)
chr6 (5-38)||(28148680-28148713)
chr6 (1-38)||(30496134-30496171)
chr6 (1-38)||(30885517-30885554)
chr6 (1-38)||(32166455-32166492)
chr6 (5-38)||(32611501-32611534)
chr6 (5-38)||(33573907-33573940)
chr6 (5-38)||(33646925-33646958)
chr6 (1-37)||(4661182-4661218)
chr6 (1-37)||(10913027-10913063)
chr6 (5-37)||(17441787-17441819)
chr6 (5-37)||(28842744-28842776)
[»] chr5 (29 HSPs)
chr5 (1-38)||(11188629-11188666)
chr5 (1-38)||(17545119-17545156)
chr5 (1-38)||(22569192-22569229)
chr5 (1-38)||(28308320-28308357)
chr5 (1-38)||(36735958-36735995)
chr5 (5-38)||(2301518-2301551)
chr5 (5-38)||(2848303-2848336)
chr5 (5-38)||(4745823-4745856)
chr5 (1-34)||(5908270-5908303)
chr5 (1-38)||(8478840-8478877)
chr5 (5-38)||(8968839-8968872)
chr5 (5-38)||(9835123-9835156)
chr5 (5-38)||(10404217-10404250)
chr5 (1-38)||(10905083-10905120)
chr5 (5-38)||(11795583-11795616)
chr5 (5-38)||(12463846-12463879)
chr5 (1-38)||(17064806-17064843)
chr5 (5-38)||(21749325-21749358)
chr5 (5-38)||(24033167-24033200)
chr5 (5-38)||(25400314-25400347)
chr5 (5-38)||(25648031-25648064)
chr5 (5-38)||(27765347-27765380)
chr5 (5-38)||(29691447-29691480)
chr5 (5-38)||(30641578-30641611)
chr5 (1-38)||(31700331-31700368)
chr5 (5-38)||(35515602-35515635)
chr5 (5-38)||(39919048-39919081)
chr5 (2-38)||(4238104-4238140)
chr5 (1-37)||(4238256-4238292)
[»] chr3 (48 HSPs)
chr3 (1-38)||(3748549-3748586)
chr3 (5-38)||(9176533-9176566)
chr3 (1-38)||(17218574-17218611)
chr3 (1-38)||(22501878-22501915)
chr3 (1-38)||(33606887-33606924)
chr3 (1-38)||(34757602-34757639)
chr3 (1-38)||(44764517-44764554)
chr3 (1-37)||(6488210-6488246)
chr3 (5-38)||(2523016-2523049)
chr3 (5-38)||(4139090-4139123)
chr3 (1-38)||(4541983-4542020)
chr3 (1-34)||(5173962-5173995)
chr3 (5-38)||(6919910-6919943)
chr3 (5-38)||(7270045-7270078)
chr3 (5-38)||(8964723-8964756)
chr3 (5-38)||(10482800-10482833)
chr3 (5-38)||(11206080-11206113)
chr3 (1-38)||(13638192-13638229)
chr3 (1-38)||(17608266-17608303)
chr3 (5-38)||(18194428-18194461)
chr3 (5-38)||(21324692-21324725)
chr3 (1-38)||(25938877-25938914)
chr3 (5-38)||(26942843-26942876)
chr3 (1-38)||(28689619-28689656)
chr3 (5-38)||(30555174-30555207)
chr3 (5-38)||(31327448-31327481)
chr3 (5-38)||(32828531-32828564)
chr3 (5-38)||(33706674-33706707)
chr3 (1-38)||(37447892-37447929)
chr3 (5-38)||(37488407-37488440)
chr3 (5-38)||(37800558-37800591)
chr3 (1-38)||(38819271-38819308)
chr3 (5-38)||(39720025-39720058)
chr3 (1-38)||(39966021-39966058)
chr3 (5-38)||(40548393-40548426)
chr3 (5-38)||(40933778-40933811)
chr3 (5-38)||(41936354-41936387)
chr3 (5-38)||(45701434-45701467)
chr3 (5-38)||(46795876-46795909)
chr3 (5-38)||(48251662-48251695)
chr3 (5-38)||(50496761-50496794)
chr3 (5-38)||(50675689-50675722)
chr3 (5-38)||(53163684-53163717)
chr3 (5-38)||(53432684-53432717)
chr3 (1-38)||(53752647-53752684)
chr3 (5-38)||(53906469-53906502)
chr3 (1-37)||(25716001-25716037)
chr3 (1-37)||(39425746-39425782)
[»] chr1 (43 HSPs)
chr1 (1-38)||(7166174-7166211)
chr1 (1-38)||(11215087-11215124)
chr1 (1-38)||(19011441-19011478)
chr1 (1-38)||(22563472-22563509)
chr1 (1-38)||(45333659-45333696)
chr1 (1-38)||(45517215-45517252)
chr1 (1-38)||(50899450-50899487)
chr1 (1-38)||(51050276-51050313)
chr1 (6-38)||(2352512-2352544)
chr1 (1-37)||(18467146-18467182)
chr1 (3-38)||(40520927-40520962)
chr1 (5-38)||(1570139-1570172)
chr1 (5-38)||(2277844-2277877)
chr1 (1-38)||(2556642-2556679)
chr1 (1-38)||(3269697-3269734)
chr1 (1-38)||(3560328-3560365)
chr1 (5-38)||(4482545-4482578)
chr1 (5-38)||(6438011-6438044)
chr1 (5-38)||(6702666-6702699)
chr1 (1-34)||(7491846-7491879)
chr1 (5-38)||(8984453-8984486)
chr1 (5-38)||(12048071-12048104)
chr1 (5-38)||(12502201-12502234)
chr1 (5-38)||(12650331-12650364)
chr1 (5-38)||(13773258-13773291)
chr1 (1-38)||(15390306-15390343)
chr1 (5-38)||(15819548-15819581)
chr1 (5-38)||(21265746-21265779)
chr1 (5-38)||(26584693-26584726)
chr1 (5-38)||(27818658-27818691)
chr1 (5-38)||(28564292-28564325)
chr1 (5-38)||(32594341-32594374)
chr1 (5-38)||(32995092-32995125)
chr1 (5-38)||(34058304-34058337)
chr1 (1-38)||(38851980-38852017)
chr1 (5-38)||(40519490-40519523)
chr1 (5-38)||(46965830-46965863)
chr1 (5-38)||(48643713-48643746)
chr1 (1-38)||(48897064-48897101)
chr1 (1-38)||(50119057-50119094)
chr1 (5-37)||(18534091-18534123)
chr1 (1-33)||(41620464-41620496)
chr1 (5-37)||(41709871-41709903)
[»] scaffold1213 (1 HSPs)
scaffold1213 (5-38)||(594-627)
[»] scaffold1185 (1 HSPs)
scaffold1185 (5-38)||(2340-2373)
[»] scaffold1088 (1 HSPs)
scaffold1088 (5-38)||(2908-2941)
[»] scaffold0690 (1 HSPs)
scaffold0690 (5-38)||(3756-3789)
[»] scaffold0275 (1 HSPs)
scaffold0275 (5-38)||(8910-8943)
[»] scaffold0187 (2 HSPs)
scaffold0187 (5-38)||(11067-11100)
scaffold0187 (5-38)||(21395-21428)
[»] scaffold0179 (1 HSPs)
scaffold0179 (1-38)||(6063-6100)
[»] scaffold0128 (1 HSPs)
scaffold0128 (5-38)||(17710-17743)
[»] scaffold0117 (1 HSPs)
scaffold0117 (5-38)||(18426-18459)
[»] scaffold0088 (1 HSPs)
scaffold0088 (5-38)||(10773-10806)
[»] scaffold0028 (1 HSPs)
scaffold0028 (5-38)||(112198-112231)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-38)||(12208-12241)
[»] scaffold0009 (1 HSPs)
scaffold0009 (5-38)||(266652-266685)
[»] scaffold0608 (1 HSPs)
scaffold0608 (5-37)||(9056-9088)
[»] scaffold0460 (1 HSPs)
scaffold0460 (5-37)||(12549-12581)
[»] scaffold0294 (1 HSPs)
scaffold0294 (5-37)||(17209-17241)
[»] scaffold0288 (1 HSPs)
scaffold0288 (1-37)||(21350-21386)


Alignment Details
Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 22365290 - 22365154
Alignment:
Q  51 atatgactagacttattaatctaatgatatatcatataagtgcaatactgtttactatttactatttacatgtgtaacatattaattagtcatgaggaag 150  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||||    
T  22365290 atatgacgaaacttattaatctaatgatatatcatataagtgcaatactgtttactatttac-------atgtgtaacatattaattagtcatgaagaag 22365198  T
Q  151 ggctacatttataaatatataaaaagtcgtcttccaccctttggag 196  Q
    |||||| |||||  ||||||| |||||||||||||| |||||||||    
T  22365197 ggctacttttat--atatatataaagtcgtcttccatcctttggag 22365154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4700922 - 4700885
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  4700922 atttaattgtgtgagctctagccactaggctacttgac 4700885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13564252 - 13564215
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13564252 atttaattgtgtgagctctagccactaggctacttgac 13564215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37935947 - 37935984
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  37935947 atttaattgtgtgagctctagccactaggctacttgac 37935984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45312241 - 45312204
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  45312241 atttaattgtgtgagctctagccaataggctacttgac 45312204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48569160 - 48569123
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48569160 atttaattgtgtgagctctagccactaggctacttgac 48569123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48949715 - 48949752
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48949715 atttaattgtgtgagctctagccaataggctacttgac 48949752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Original strand, 43905796 - 43905831
Alignment:
Q  2 tttaattgtgtgagctctagccagtaggctacttga 37  Q
    ||||||||||||||||||||||| ||||||||||||    
T  43905796 tttaattgtgtgagctctagccactaggctacttga 43905831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 2222629 - 2222662
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2222629 aattgtgtgagctctagccactaggctacttgac 2222662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 2629664 - 2629697
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  2629664 atttaattgtgtgagctctagccattaggctact 2629697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2688181 - 2688218
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  2688181 atttaaatgtgtgagctctagccactaggctacttgac 2688218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 3036035 - 3036002
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  3036035 aattgtgtgagctctagccactaggctacttgac 3036002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4590332 - 4590369
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  4590332 atttaattgtgtgagctttagccactaggctacttgac 4590369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 5304990 - 5304957
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  5304990 aattgtgtgagctctagccactaggctacttgac 5304957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 6371204 - 6371237
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  6371204 aattgtgtgagctctagccactaggctacttgac 6371237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 7686242 - 7686209
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  7686242 aattgtgtgagctctagccattaggctacttgac 7686209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 10141073 - 10141106
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10141073 aattgtgtgagctctagccactaggctacttgac 10141106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 10402531 - 10402564
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10402531 aattgtgtgagctctagccactaggctacttgac 10402564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12582008 - 12581975
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12582008 aattgtgtgagctctagccactaggctacttgac 12581975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19963868 - 19963905
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  19963868 atttaattgtgtgagctctagccattaggctatttgac 19963905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21380158 - 21380125
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21380158 aattgtgtgagctctagccattaggctacttgac 21380125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 26919448 - 26919415
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  26919448 aattgtgtgagctctagccactaggctacttgac 26919415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29356362 - 29356399
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  29356362 atttaattgtgtgagttctagccattaggctacttgac 29356399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31852434 - 31852467
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  31852434 atttaattgtgtgagctctagccactaggctact 31852467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 33530883 - 33530916
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33530883 aattgtgtgagctctagccactaggctacttgac 33530916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 35948163 - 35948130
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  35948163 aattgtgtgagctctagccactaggctacttgac 35948130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 37719090 - 37719123
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  37719090 aattgtgtgagctctagccactaggctacttgac 37719123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38228522 - 38228559
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  38228522 atttaattgtgtgagctctatccactaggctacttgac 38228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 40051712 - 40051745
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  40051712 aattgtgtgagctctagccactaggctacttgac 40051745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 40994083 - 40994050
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  40994083 aattgtgtgagctctagccactaggctacttgac 40994050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42218836 - 42218873
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  42218836 atttaattgtgtgagctttagccactaggctacttgac 42218873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 43147364 - 43147331
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  43147364 aattgtgtgagctctagccactaggctacttgac 43147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 43596985 - 43597018
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  43596985 aattgtgtgagctctagccactaggctacttgac 43597018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44602563 - 44602600
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  44602563 atttaattgtgtgagctctacccactaggctacttgac 44602600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45126218 - 45126255
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  45126218 atttaattgtgtgagctttagccactaggctacttgac 45126255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45849133 - 45849170
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  45849133 atttaattgtgtgagttctagccactaggctacttgac 45849170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 46775010 - 46774977
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  46775010 aattgtgtgagctctagccactaggctacttgac 46774977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47934056 - 47934019
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  47934056 atttaattgtgtgagctctagccactagactacttgac 47934019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48744293 - 48744330
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  48744293 atttaattgtgtgagttctagccactaggctacttgac 48744330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 48950874 - 48950907
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  48950874 aattgtgtgagctctagccactaggctacttgac 48950907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 49447207 - 49447244
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  49447207 atttaattgtgtgggctctagccactaggctacttgac 49447244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 49757264 - 49757231
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  49757264 aattgtgtgagctctagccactaggctacttgac 49757231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 49901572 - 49901605
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  49901572 aattgtgtgagctctagccactaggctacttgac 49901605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 52731419 - 52731386
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  52731419 aattgtgtgagctctagccactaggctacttgac 52731386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 53634231 - 53634198
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  53634231 aattgtgtgagctctagccactaggctacttgac 53634198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 54015821 - 54015854
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  54015821 aattgtgtgagctctagccactaggctacttgac 54015854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 55536469 - 55536502
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  55536469 aattgtgtgagctctagccactaggctacttgac 55536502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 55853087 - 55853055
Alignment:
Q  6 attgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||||| |||||||||||||    
T  55853087 attgtgtgagctctagccactaggctacttgac 55853055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28692469 - 28692432
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28692469 atttaattgtgtgagctctagccagtaggctacttgac 28692432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19612793 - 19612830
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19612793 atttaattgtgtgagctctagccattaggctacttgac 19612830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29772262 - 29772225
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29772262 atttaattgtgtgagctctagccactaggctacttgac 29772225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38387741 - 38387778
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  38387741 atttaattgtgtgagctctagccactaggctacttgac 38387778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41566848 - 41566885
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  41566848 atttaattgtgtgagctctagccactaggctacttgac 41566885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 1260274 - 1260307
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  1260274 aattgtgtgagctctagccactaggctacttgac 1260307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 1309106 - 1309073
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  1309106 aattgtgtgagctctagccactaggctacttgac 1309073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 1844907 - 1844940
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  1844907 aattgtgtgagctctagccactaggctacttgac 1844940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3287041 - 3287004
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  3287041 atttaattgtgtgagctctagccactagactacttgac 3287004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5613040 - 5613077
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  5613040 atttaattgtgtgagctctaaccactaggctacttgac 5613077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 6331651 - 6331684
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  6331651 aattgtgtgagctctagccactaggctacttgac 6331684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 11190018 - 11190051
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  11190018 aattgtgtgagctctagccattaggctacttgac 11190051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14215968 - 14216005
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  14215968 atttaattgtgtgagctctagcaattaggctacttgac 14216005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15069783 - 15069746
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  15069783 atttaattgtgtgagctctagcgaataggctacttgac 15069746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 17499039 - 17499072
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17499039 aattgtgtgagctctagccactaggctacttgac 17499072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 18694875 - 18694908
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  18694875 aattgtgtgagctctagccactaggctacttgac 18694908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 19281698 - 19281731
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  19281698 aattgtgtgagctctagccattaggctacttgac 19281731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 20296508 - 20296541
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  20296508 aattgtgtgagctctagccactaggctacttgac 20296541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 27449273 - 27449306
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  27449273 aattgtgtgagctctagccaataggctacttgac 27449306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 33228913 - 33228880
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33228913 aattgtgtgagctctagccactaggctacttgac 33228880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 36005532 - 36005565
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  36005532 aattgtgtgagctctagccaataggctacttgac 36005565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37063598 - 37063635
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  37063598 atttaattgtgtgagctctagccactagactacttgac 37063635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 38400404 - 38400437
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  38400404 aattgtgtgagctctagccactaggctacttgac 38400437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 40535429 - 40535396
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  40535429 aattgtgtgagctctagccactaggctacttgac 40535396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 41509606 - 41509639
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  41509606 aattgtgtgagctctagccactaggctacttgac 41509639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 44822514 - 44822547
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  44822514 aattgtgtgagctctagccactaggctacttgac 44822547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44857218 - 44857181
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  44857218 atttaattgtgtaagctctagccactaggctacttgac 44857181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 19253996 - 19254028
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  19253996 aattgtgtgagctctagccactaggctacttga 19254028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30390353 - 30390317
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  30390353 atttaattgtgtgagctctaaccactaggctacttga 30390317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3998 - 3961
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3998 atttaattgtgtgagctctagccactaggctacttgac 3961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8265354 - 8265391
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  8265354 atttaattgtgtgagctctagccactaggctacttgac 8265391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 16432112 - 16432075
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16432112 atttaattgtgtgagctctagccactaggctacttgac 16432075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 16449211 - 16449248
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16449211 atttaattgtgtgagctctagccactaggctacttgac 16449248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23178875 - 23178838
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  23178875 atttaattgtgtgagctctagccactaggctacttgac 23178838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39169571 - 39169608
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  39169571 atttaattgtgtgagctctagccactaggctacttgac 39169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 22274594 - 22274559
Alignment:
Q  3 ttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  22274594 ttaattgtgtgagctctagccactaggctacttgac 22274559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 257629 - 257662
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  257629 aattgtgtgagctctagccactaggctacttgac 257662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 658291 - 658258
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  658291 aattgtgtgagctctagccactaggctacttgac 658258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 844027 - 843994
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  844027 aattgtgtgagctctagccactaggctacttgac 843994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 1937400 - 1937433
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  1937400 aattgtgtgagctctagccactaggctacttgac 1937433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 2787061 - 2787028
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2787061 aattgtgtgagctctagccactaggctacttgac 2787028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 6659379 - 6659412
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||| ||||||||||||||||||||    
T  6659379 aattgtgtgagctttagccagtaggctacttgac 6659412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 6739781 - 6739814
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||| ||||||||||||||||||||    
T  6739781 aattgtgtgagctttagccagtaggctacttgac 6739814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 7816493 - 7816526
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  7816493 aattgtgtgagctctagccactaggctacttgac 7816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 9187203 - 9187170
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  9187203 aattgtgtgagctctagccactaggctacttgac 9187170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 10568175 - 10568208
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10568175 aattgtgtgagctctagccactaggctacttgac 10568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 10736854 - 10736821
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10736854 aattgtgtgagctctagccactaggctacttgac 10736821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 11127992 - 11128025
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  11127992 aattgtgtgagctctagccactaggctacttgac 11128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13647441 - 13647404
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  13647441 atttaattgtgtgagctctagccactagactacttgac 13647404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13747866 - 13747829
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  13747866 atttaattgtgtgagctctagccactagactacttgac 13747829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 17027861 - 17027828
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17027861 aattgtgtgagctctagccactaggctacttgac 17027828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 17072543 - 17072510
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17072543 aattgtgtgagctctagccactaggctacttgac 17072510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 17558297 - 17558264
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17558297 aattgtgtgagctctagccactaggctacttgac 17558264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 17575728 - 17575761
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17575728 aattgtgtgagctctagccactaggctacttgac 17575761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 17698612 - 17698645
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17698612 aattgtgtgagctctagccactaggctacttgac 17698645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24458402 - 24458439
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  24458402 atttaattgtgtgagctctagccactagactacttgac 24458439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 28420404 - 28420371
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  28420404 aattgtgtgagctctagccactaggctacttgac 28420371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 28909555 - 28909588
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  28909555 aattgtgtgagctctagccactaggctacttgac 28909588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 29514716 - 29514749
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  29514716 aattgtgtgagctctagccactaggctacttgac 29514749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29729205 - 29729242
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||||||| || |||||||||||||    
T  29729205 atttaattgtgtgagctctagtcactaggctacttgac 29729242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 29733985 - 29733952
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  29733985 aattgtgtgagctctagccactaggctacttgac 29733952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 31450937 - 31450904
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  31450937 aattgtgtgagctctagccactaggctacttgac 31450904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 33838414 - 33838447
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33838414 aattgtgtgagctctagccactaggctacttgac 33838447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 34266102 - 34266135
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  34266102 aattgtgtgagctctagccactaggctacttgac 34266135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 37717453 - 37717486
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  37717453 aattgtgtgagctctagccactaggctacttgac 37717486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 38219548 - 38219515
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  38219548 aattgtgtgagctctagccactaggctacttgac 38219515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 39587637 - 39587670
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  39587637 aattgtgtgagctctagccactaggctacttgac 39587670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 43186943 - 43186976
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  43186943 aattgtgtgagctctagccactaggctacttgac 43186976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43656122 - 43656159
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  43656122 atttaattgtgtgagctctagccactagactacttgac 43656159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43847020 - 43847053
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  43847020 atttaattgtgtgagctctagccactaggctact 43847053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 3189939 - 3189907
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  3189939 aattgtgtgagctctagccactaggctacttga 3189907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 6280567 - 6280603
Alignment:
Q  2 tttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||| |||| |||||||||||||    
T  6280567 tttaattgtgtgagctctggccactaggctacttgac 6280603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 10761909 - 10761941
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  10761909 aattgtgtgagctctagccactaggctacttga 10761941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 29260709 - 29260741
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  29260709 aattgtgtgagctctagccattaggctacttga 29260741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 31152999 - 31152967
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  31152999 aattgtgtgagctctagccattaggctacttga 31152967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 34894459 - 34894491
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  34894459 aattgtgtgagctctagccactaggctacttga 34894491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9697875 - 9697838
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9697875 atttaattgtgtgagctctagccactaggctacttgac 9697838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13720856 - 13720893
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  13720856 atttaattgtgtgagctctagccactaggctacttgac 13720893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15238975 - 15239012
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  15238975 atttaattgtgtgagctctagccactaggctacttgac 15239012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19331484 - 19331447
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19331484 atttaattgtgtgagctctagccactaggctacttgac 19331447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27424924 - 27424961
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  27424924 atttaattgtgtgagctctagccactaggctacttgac 27424961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48119556 - 48119593
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48119556 atttaattgtgtgagctctagccactaggctacttgac 48119593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48719885 - 48719922
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  48719885 atttaattgtgtgagctctagccactaggctacttgac 48719922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 3062864 - 3062897
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  3062864 aattgtgtgagctctagccactaggctacttgac 3062897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 4960874 - 4960907
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  4960874 aattgtgtgagctctagccactaggctacttgac 4960907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5804941 - 5804978
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| || ||||||||||    
T  5804941 atttaattgtgtgagctctagccactaagctacttgac 5804978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 10244869 - 10244836
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10244869 aattgtgtgagctctagccactaggctacttgac 10244836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12640569 - 12640536
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12640569 aattgtgtgagctctagccactaggctacttgac 12640536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 12772205 - 12772238
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12772205 aattgtgtgagctctagccactaggctacttgac 12772238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12935825 - 12935858
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  12935825 atttaattgtgtgagctctagccactaggctact 12935858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19752952 - 19752915
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  19752952 atttaattgtgtgagttctagccactaggctacttgac 19752915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21066971 - 21067008
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  21066971 atttaattgtgcgagctctagccactaggctacttgac 21067008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21762872 - 21762839
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21762872 aattgtgtgagctctagccactaggctacttgac 21762839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 24781120 - 24781153
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  24781120 aattgtgtgagctctagccactaggctacttgac 24781153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 24880432 - 24880399
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  24880432 aattgtgtgagctctagccaataggctacttgac 24880399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25833641 - 25833678
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  25833641 atttaattgtgtaagctctagccactaggctacttgac 25833678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 26801709 - 26801676
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  26801709 aattgtgtgagctctagccactaggctacttgac 26801676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 27510237 - 27510204
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  27510237 aattgtgtgagctctagccactaggctacttgac 27510204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 28547761 - 28547728
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  28547761 aattgtgtgagctctagccactaggctacttgac 28547728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 29617495 - 29617528
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  29617495 aattgtgtgagctctagccactaggctacttgac 29617528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 31026309 - 31026342
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  31026309 aattgtgtgagctctagccactaggctacttgac 31026342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 32619440 - 32619473
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  32619440 aattgtgtgagctctagccactaggctacttgac 32619473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 35645689 - 35645722
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  35645689 aattgtgtgagctctagccactaggctacttgac 35645722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 35950218 - 35950251
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  35950218 aattgtgtgagctctagccactaggctacttgac 35950251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36469689 - 36469652
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  36469689 atttaattgtgtgagcgctagccactaggctacttgac 36469652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38889477 - 38889440
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  38889477 atttaattgtgtgagctctatccactaggctacttgac 38889440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 43119412 - 43119379
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  43119412 aattgtgtgagctctagccactaggctacttgac 43119379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 47255070 - 47255037
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  47255070 aattgtgtgagctctagccactaggctacttgac 47255037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 47999870 - 47999903
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  47999870 aattgtgtgagctctagccattaggctacttgac 47999903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 24508916 - 24508948
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  24508916 aattgtgtgagctctagccactaggctacttga 24508948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3795758 - 3795721
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3795758 atttaattgtgtgagctctagccactaggctacttgac 3795721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7425452 - 7425489
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7425452 atttaattgtgtgagctctagccactaggctacttgac 7425489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20729037 - 20729071
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctactt 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  20729037 atttaattgtgtgagctctagccactaggctactt 20729071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30290 - 30253
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  30290 atttaattgtgtgagttctagccactaggctacttgac 30253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 2816980 - 2817013
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2816980 aattgtgtgagctctagccactaggctacttgac 2817013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3012707 - 3012670
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  3012707 atttaattgtgtgagctctagccattagactacttgac 3012670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3640600 - 3640637
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  3640600 atttaattgtgtgagctctagccactagactacttgac 3640637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 3794153 - 3794120
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  3794153 aattgtgtgagctctagccactaggctacttgac 3794120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4408436 - 4408473
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  4408436 atttaattgtgtgagctctggccactaggctacttgac 4408473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 5052054 - 5052021
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  5052054 aattgtgtgagctctagccactaggctacttgac 5052021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 7207934 - 7207967
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  7207934 aattgtgtgagctctagccactaggctacttgac 7207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 7328627 - 7328594
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  7328627 aattgtgtgagctctagccactaggctacttgac 7328594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7414410 - 7414447
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  7414410 atttaattgtgtgagctatagccactaggctacttgac 7414447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7418364 - 7418401
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  7418364 atttaattgtgtgagctctagccactcggctacttgac 7418401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 7581134 - 7581167
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  7581134 aattgtgtgagctctagccactaggctacttgac 7581167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 8857173 - 8857206
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  8857173 aattgtgtgagctctagccactaggctacttgac 8857206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9435712 - 9435749
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  9435712 atttaattgtgtgagctctagccattaggctatttgac 9435749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 9704506 - 9704539
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  9704506 aattgtgtgagctctagccactaggctacttgac 9704539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 10517289 - 10517322
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10517289 aattgtgtgagctctagccactaggctacttgac 10517322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 13116604 - 13116571
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  13116604 aattgtgtgagctctagccactaggctacttgac 13116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15963927 - 15963890
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  15963927 atttaattgtgtgagttctagccactaggctacttgac 15963890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19892260 - 19892223
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  19892260 atttaattgtgagagctctagccactaggctacttgac 19892223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 19953808 - 19953775
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  19953808 aattgtgtgagctctagccactaggctacttgac 19953775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26347490 - 26347527
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  26347490 atttaattgtgtgagctctagccactagactacttgac 26347527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 27218974 - 27219007
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  27218974 aattgtgtgagctctagccactaggctacttgac 27219007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 28148713 - 28148680
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  28148713 aattgtgtgagctctagccactaggctacttgac 28148680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30496134 - 30496171
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  30496134 atttaattgtgtgagccctagccactaggctacttgac 30496171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30885554 - 30885517
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  30885554 atttaattgtgtgaactctagccactaggctacttgac 30885517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32166455 - 32166492
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  32166455 atttaattgtgtgagctctagccactaggctgcttgac 32166492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 32611534 - 32611501
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  32611534 aattgtgtgagctctagccactaggctacttgac 32611501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 33573907 - 33573940
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33573907 aattgtgtgagctctagccactaggctacttgac 33573940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 33646925 - 33646958
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33646925 aattgtgtgagctctagccactaggctacttgac 33646958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4661182 - 4661218
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  4661182 atttatttgtgtgagctctagccactaggctacttga 4661218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10913063 - 10913027
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||||||| || |||||||||    
T  10913063 atttaattgtgtgagctctagccactaagctacttga 10913027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 17441819 - 17441787
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  17441819 aattgtgtgagctctagccactaggctacttga 17441787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 28842744 - 28842776
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  28842744 aattgtgtgagctctagccactaggctacttga 28842776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11188666 - 11188629
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11188666 atttaattgtgtgagctctagccactaggctacttgac 11188629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17545156 - 17545119
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17545156 atttaattgtgtgagctctagccactaggctacttgac 17545119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22569229 - 22569192
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22569229 atttaattgtgtgagctctagccactaggctacttgac 22569192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28308320 - 28308357
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28308320 atttaattgtgtgagctctagccactaggctacttgac 28308357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 36735958 - 36735995
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  36735958 atttaattgtgtgagctctagccactaggctacttgac 36735995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 2301551 - 2301518
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2301551 aattgtgtgagctctagccactaggctacttgac 2301518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 2848303 - 2848336
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2848303 aattgtgtgagctctagccactaggctacttgac 2848336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 4745856 - 4745823
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  4745856 aattgtgtgagctctagccactaggctacttgac 4745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5908303 - 5908270
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  5908303 atttaattgtgtgagctctagccactaggctact 5908270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8478877 - 8478840
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  8478877 atttaattgtgtgagctctagccactagactacttgac 8478840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 8968839 - 8968872
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  8968839 aattgtgtgagctctagccactaggctacttgac 8968872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 9835123 - 9835156
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  9835123 aattgtgtgagctctagccactaggctacttgac 9835156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 10404217 - 10404250
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10404217 aattgtgtgagctctagccactaggctacttgac 10404250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10905120 - 10905083
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  10905120 atttaattgtgcgagctctagccactaggctacttgac 10905083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 11795583 - 11795616
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  11795583 aattgtgtgagctctagccactaggctacttgac 11795616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 12463846 - 12463879
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12463846 aattgtgtgagctctagccactaggctacttgac 12463879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17064843 - 17064806
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  17064843 atttaattgtgtgagttctagccactaggctacttgac 17064806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21749358 - 21749325
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21749358 aattgtgtgagctctagccactaggctacttgac 21749325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 24033167 - 24033200
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  24033167 aattgtgtgagctctagccattaggctacttgac 24033200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 25400347 - 25400314
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  25400347 aattgtgtgagctctagccactaggctacttgac 25400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 25648064 - 25648031
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  25648064 aattgtgtgagctctagccactaggctacttgac 25648031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 27765347 - 27765380
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  27765347 aattgtgtgagctctagccactaggctacttgac 27765380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 29691447 - 29691480
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  29691447 aattgtgtgagctctagccactaggctacttgac 29691480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 30641578 - 30641611
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  30641578 aattgtgtgagctctagccattaggctacttgac 30641611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31700368 - 31700331
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||| | |||||||||||||    
T  31700368 atttaattgtgtgagctctagctattaggctacttgac 31700331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 35515602 - 35515635
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  35515602 aattgtgtgagctctagccactaggctacttgac 35515635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 39919081 - 39919048
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  39919081 aattgtgtgagctctagccactaggctacttgac 39919048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 4238140 - 4238104
Alignment:
Q  2 tttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||| |||||| |||||||||||||    
T  4238140 tttaattgtgtgagctttagccaataggctacttgac 4238104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4238292 - 4238256
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    ||||||||||||||||||||| || ||||||||||||    
T  4238292 atttaattgtgtgagctctagtcattaggctacttga 4238256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3748586 - 3748549
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  3748586 atttaattgtgtgagctctagccactaggctacttgac 3748549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 9176566 - 9176533
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||||||||||||||||||||    
T  9176566 aattgtgtgagctctagccagtaggctacttgac 9176533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17218574 - 17218611
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17218574 atttaattgtgtgagctctagccactaggctacttgac 17218611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22501915 - 22501878
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22501915 atttaattgtgtgagctctagccactaggctacttgac 22501878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33606924 - 33606887
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  33606924 atttaattgtgtgagctctagccactaggctacttgac 33606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34757602 - 34757639
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  34757602 atttaattgtgtgagctctagccactaggctacttgac 34757639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44764554 - 44764517
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  44764554 atttaattgtgtgagctctagccactaggctacttgac 44764517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6488210 - 6488246
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  6488210 atttaattgtgtgagctctagccactaggctacttga 6488246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 2523016 - 2523049
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2523016 aattgtgtgagctctagccactaggctacttgac 2523049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 4139090 - 4139123
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  4139090 aattgtgtgagctctagccactaggctacttgac 4139123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4541983 - 4542020
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  4541983 atttaattgtgtgaactctagccactaggctacttgac 4542020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5173995 - 5173962
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  5173995 atttaattgtgtgagctctagccactaggctact 5173962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 6919943 - 6919910
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  6919943 aattgtgtgagctctagccactaggctacttgac 6919910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 7270045 - 7270078
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  7270045 aattgtgtgagctctagccactaggctacttgac 7270078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 8964756 - 8964723
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  8964756 aattgtgtgagctctagccactaggctacttgac 8964723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 10482833 - 10482800
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10482833 aattgtgtgagctctagccactaggctacttgac 10482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 11206080 - 11206113
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  11206080 aattgtgtgagctctagccactaggctacttgac 11206113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13638229 - 13638192
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  13638229 atttaattgtgtgagctatagccactaggctacttgac 13638192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17608303 - 17608266
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  17608303 atttaattgtgtgagttctagccactaggctacttgac 17608266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 18194428 - 18194461
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  18194428 aattgtgtgagctctagccactaggctacttgac 18194461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21324725 - 21324692
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21324725 aattgtgtgagctctagccactaggctacttgac 21324692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25938914 - 25938877
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  25938914 atttaactgtgtgagctctagccactaggctacttgac 25938877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 26942843 - 26942876
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  26942843 aattgtgtgagctctagccattaggctacttgac 26942876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28689656 - 28689619
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  28689656 atttaattgtgtgagctctggccactaggctacttgac 28689619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 30555207 - 30555174
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  30555207 aattgtgtgagctctagccactaggctacttgac 30555174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 31327481 - 31327448
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  31327481 aattgtgtgagctctagccactaggctacttgac 31327448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 32828531 - 32828564
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  32828531 aattgtgtgagctctagccattaggctacttgac 32828564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 33706707 - 33706674
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  33706707 aattgtgtgagctctagccactaggctacttgac 33706674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37447892 - 37447929
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  37447892 atttaattgtgtgagctctaaccattaggctacttgac 37447929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 37488440 - 37488407
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  37488440 aattgtgtgagctctagccactaggctacttgac 37488407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 37800591 - 37800558
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  37800591 aattgtgtgagctctagccactaggctacttgac 37800558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38819308 - 38819271
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  38819308 atttaattgtgtgagctctagccactagactacttgac 38819271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 39720025 - 39720058
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  39720025 aattgtgtgagctctagccactaggctacttgac 39720058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39966058 - 39966021
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| || ||||||||||    
T  39966058 atttaattgtgtgagctctagccattatgctacttgac 39966021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 40548393 - 40548426
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  40548393 aattgtgtgagctctagccactaggctacttgac 40548426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 40933811 - 40933778
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  40933811 aattgtgtgagctctagccactaggctacttgac 40933778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 41936387 - 41936354
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  41936387 aattgtgtgagctctagccactaggctacttgac 41936354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 45701434 - 45701467
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  45701434 aattgtgtgagctctagccactaggctacttgac 45701467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 46795909 - 46795876
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  46795909 aattgtgtgagctctagccattaggctacttgac 46795876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 48251662 - 48251695
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  48251662 aattgtgtgagctctagccactaggctacttgac 48251695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 50496794 - 50496761
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  50496794 aattgtgtgagctctagccactaggctacttgac 50496761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 50675722 - 50675689
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  50675722 aattgtgtgagctctagccactaggctacttgac 50675689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 53163684 - 53163717
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  53163684 aattgtgtgagctctagccactaggctacttgac 53163717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 53432717 - 53432684
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  53432717 aattgtgtgagctctagccactaggctacttgac 53432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 53752684 - 53752647
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  53752684 atttaattgtgtgagttctagccactaggctacttgac 53752647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 53906469 - 53906502
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  53906469 aattgtgtgagctctagccactaggctacttgac 53906502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25716037 - 25716001
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  25716037 atttaattgtttgagctctagccactaggctacttga 25716001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39425782 - 39425746
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    ||||||||||||||||||||| || ||||||||||||    
T  39425782 atttaattgtgtgagctctaggcactaggctacttga 39425746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7166211 - 7166174
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7166211 atttaattgtgtgagctctagccactaggctacttgac 7166174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11215087 - 11215124
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  11215087 atttaattgtgtgagctctagccactaggctacttgac 11215124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19011441 - 19011478
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  19011441 atttaattgtgtgagctctagccactaggctacttgac 19011478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22563472 - 22563509
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  22563472 atttaattgtgtgagctctagccactaggctacttgac 22563509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45333696 - 45333659
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  45333696 atttaattgtgtgagctctagccactaggctacttgac 45333659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45517252 - 45517215
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  45517252 atttaattgtgtgagctctagccactaggctacttgac 45517215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 50899487 - 50899450
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  50899487 atttaattgtgtgagctctagccactaggctacttgac 50899450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51050276 - 51050313
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  51050276 atttaattgtgtgagctctagccactaggctacttgac 51050313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 2352544 - 2352512
Alignment:
Q  6 attgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||||||||||||    
T  2352544 attgtgtgagctctagccagtaggctacttgac 2352512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18467182 - 18467146
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  18467182 atttaattgtgtgagctctagccactaggctacttga 18467146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 40520927 - 40520962
Alignment:
Q  3 ttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  40520927 ttaattgtgtgagctctagccactaggctacttgac 40520962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 1570172 - 1570139
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  1570172 aattgtgtgagctctagccactaggctacttgac 1570139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 2277844 - 2277877
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2277844 aattgtgtgagctctagccactaggctacttgac 2277877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2556642 - 2556679
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  2556642 atttaattgtgtgaactctagccactaggctacttgac 2556679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3269697 - 3269734
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  3269697 atttaattgtgtgagttctagccactaggctacttgac 3269734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3560365 - 3560328
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  3560365 atttaattgtgtgagctctagccactagactacttgac 3560328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 4482578 - 4482545
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  4482578 aattgtgtgagctctagccactaggctacttgac 4482545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 6438044 - 6438011
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  6438044 aattgtgtgagctctagccactaggctacttgac 6438011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 6702666 - 6702699
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  6702666 aattgtgtgagctctagccattaggctacttgac 6702699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7491846 - 7491879
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctact 34  Q
    |||||||||||||||||||||||| |||||||||    
T  7491846 atttaattgtgtgagctctagccactaggctact 7491879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 8984486 - 8984453
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  8984486 aattgtgtgagctctagccactaggctacttgac 8984453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12048104 - 12048071
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12048104 aattgtgtgagctctagccactaggctacttgac 12048071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12502234 - 12502201
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12502234 aattgtgtgagctctagccactaggctacttgac 12502201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12650364 - 12650331
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12650364 aattgtgtgagctctagccactaggctacttgac 12650331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 13773258 - 13773291
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  13773258 aattgtgtgagctctagccactaggctacttgac 13773291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15390306 - 15390343
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  15390306 atttaattgtgtgagttctagccactaggctacttgac 15390343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 15819581 - 15819548
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  15819581 aattgtgtgagctctagccactaggctacttgac 15819548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 21265746 - 21265779
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21265746 aattgtgtgagctctagccactaggctacttgac 21265779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 26584726 - 26584693
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  26584726 aattgtgtgagctctagccactaggctacttgac 26584693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 27818658 - 27818691
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  27818658 aattgtgtgagctctagccactaggctacttgac 27818691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 28564325 - 28564292
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  28564325 aattgtgtgagctctagccactaggctacttgac 28564292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 32594341 - 32594374
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  32594341 aattgtgtgagctctagccactaggctacttgac 32594374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 32995092 - 32995125
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  32995092 aattgtgtgagctctagccactaggctacttgac 32995125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 34058304 - 34058337
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  34058304 aattgtgtgagctctagccattaggctacttgac 34058337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38852017 - 38851980
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  38852017 atttaattgtgtgagttctagccactaggctacttgac 38851980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 40519523 - 40519490
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  40519523 aattgtgtgagctctagccactaggctacttgac 40519490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 46965830 - 46965863
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  46965830 aattgtgtgagctctagccactaggctacttgac 46965863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 48643713 - 48643746
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  48643713 aattgtgtgagctctagccactaggctacttgac 48643746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48897101 - 48897064
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  48897101 atttaattgtgtgagctctaaccactaggctacttgac 48897064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50119057 - 50119094
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  50119057 atttaattgtgtgagctctagccactgggctacttgac 50119094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 18534091 - 18534123
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  18534091 aattgtgtgagctctagccactaggctacttga 18534123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41620464 - 41620496
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctac 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41620464 atttaattgtgtgagctctagccactaggctac 41620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 41709903 - 41709871
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  41709903 aattgtgtgagctctagccactaggctacttga 41709871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 594 - 627
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  594 aattgtgtgagctctagccactaggctacttgac 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1185 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1185
Description:

Target: scaffold1185; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 2373 - 2340
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2373 aattgtgtgagctctagccactaggctacttgac 2340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 2941 - 2908
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  2941 aattgtgtgagctctagccactaggctacttgac 2908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 3756 - 3789
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  3756 aattgtgtgagctctagccactaggctacttgac 3789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 8910 - 8943
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  8910 aattgtgtgagctctagccattaggctacttgac 8943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 11100 - 11067
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  11100 aattgtgtgagctctagccattaggctacttgac 11067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 21428 - 21395
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  21428 aattgtgtgagctctagccattaggctacttgac 21395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6063 - 6100
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  6063 atttaattgtgtgagctctaaccactaggctacttgac 6100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 17710 - 17743
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  17710 aattgtgtgagctctagccactaggctacttgac 17743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 18459 - 18426
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  18459 aattgtgtgagctctagccattaggctacttgac 18426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 10806 - 10773
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  10806 aattgtgtgagctctagccactaggctacttgac 10773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 112198 - 112231
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  112198 aattgtgtgagctctagccactaggctacttgac 112231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 12241 - 12208
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  12241 aattgtgtgagctctagccactaggctacttgac 12208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 266685 - 266652
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttgac 38  Q
    |||||||||||||||||||| |||||||||||||    
T  266685 aattgtgtgagctctagccactaggctacttgac 266652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 9056 - 9088
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  9056 aattgtgtgagctctagccactaggctacttga 9088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 12549 - 12581
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  12549 aattgtgtgagctctagccactaggctacttga 12581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 17241 - 17209
Alignment:
Q  5 aattgtgtgagctctagccagtaggctacttga 37  Q
    |||||||||||||||||||| ||||||||||||    
T  17241 aattgtgtgagctctagccactaggctacttga 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21350 - 21386
Alignment:
Q  1 atttaattgtgtgagctctagccagtaggctacttga 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  21350 atttatttgtgtgagctctagccactaggctacttga 21386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University