View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11845_high_10 (Length: 244)
Name: NF11845_high_10
Description: NF11845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11845_high_10 |
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Alignment Details
Target: chr6 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32404737 - 32404948
Alignment:
| Q |
1 |
tgcaaaatagaaatggaaccaaagcatataacttttttcagtcatgttatgttctgttttgctctgtatatgaactaaatgatttacaagactatataaa |
100 |
Q |
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| T |
32404737 |
tgcaaaatagaaatggaaccaaagcatataacttttttcagtcatgttatgttctgttttgctctgtatatgaactaaatgatttacaagactatataaa |
32404836 |
T |
|
| Q |
101 |
tttaagcaacatcaacatctcaacacacacataacttactatctggttcaaaatgcatgcgtatatgagtatgttggagctggacgtgggtggaatctat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |
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| T |
32404837 |
tttaagcaacatcaacatctcaacacacacataacttactatctggttcaaaatgcatgcg----------tgttggagctggac----gtggaatctat |
32404922 |
T |
|
| Q |
201 |
tagctactgcagtgcatgaagccgat |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32404923 |
tagctactgcagtgcatgaagccgat |
32404948 |
T |
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