View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11847_low_4 (Length: 620)
Name: NF11847_low_4
Description: NF11847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11847_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 558; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 558; E-Value: 0
Query Start/End: Original strand, 1 - 602
Target Start/End: Complemental strand, 32121349 - 32120748
Alignment:
| Q |
1 |
taccgacatttctaataaagctcaaatatataccttcagagaacttgcgacggcaacaaaaaactttagggatgaaacctttattgggcaaggtggattt |
100 |
Q |
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| T |
32121349 |
taccgacatttctaataaagctcaaatatttaccttcagagaacttgcgacggcaacaaaaaactttagggatgaaacctttattgggcaaggtggattt |
32121250 |
T |
|
| Q |
101 |
ggaactgtttacaaaggaaagctaggtagcactggtcaggtataattcaaaggatggtcgatttttacatgcttcttctttgaaatgcttataaactgat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |
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| T |
32121249 |
ggaactgtttacaaaggaaagctaggtagcactggtcaggtataattcaaaggatggacgatttttacatgcttcttctttgcaatgcttataaactgat |
32121150 |
T |
|
| Q |
201 |
ccgcaacacgatttaactattttattaaactaaaagatttggaacatttgatcaggctgtagctgttaaaagacttgatacaactggtttccaaggtgag |
300 |
Q |
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||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32121149 |
ccgcaacacaatttaactattttattaaactaaaaggtttggaacatttgatcaggctgtagctgttaaaagacttgatacaactggtttccaaggtgag |
32121050 |
T |
|
| Q |
301 |
aaagaatttttagtggaggttctcatgctctctcttctacaccatcccaaccttgttagtatgattggttactgcgcggaaggtgatcaacgacttcttg |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32121049 |
aaagaatttttagtggaggttctcatgctctctcttctacaccatcccaaccttgttagtatgattggttactgcgcggaaggtgatcaacgacttcttg |
32120950 |
T |
|
| Q |
401 |
tctatgaatacatgcctatgggatccttagaatctcatctccatggtaatgtaatgcaacatttagcnnnnnnnnacatcaaaatgttacttattactag |
500 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
32120949 |
tctatgaatacatgcctatgggatccttagaatctcatctccatggtaatgtaatgcaacatttagcttttttttacatcaaaatgttacttattactag |
32120850 |
T |
|
| Q |
501 |
ttactccatctatctacgctcataggaaatttatttgaaggctcaatctatctttccacttatattatactgtattagttacaattttgtcgggtcactt |
600 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32120849 |
ttactccatctatctacgctcataggaaatttatttgaaggctcaatctatctttccacttatattatactgtattagttacaattttgtcgggtcactt |
32120750 |
T |
|
| Q |
601 |
gc |
602 |
Q |
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|| |
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| T |
32120749 |
gc |
32120748 |
T |
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