View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11848_high_7 (Length: 285)
Name: NF11848_high_7
Description: NF11848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11848_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 272
Target Start/End: Original strand, 36884680 - 36884935
Alignment:
| Q |
17 |
agagacctctatcaccaataggaagnnnnnnngagagcataattagcattagaaatgaattcacagaaatattaatggcatcctaactcagtgaggtagc |
116 |
Q |
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| T |
36884680 |
agagacctctatcaccaataggaagaaaaaaagatagcatgattagcattagaaatgaattcacagaaatattaatggcatcctaactcagtgaggtagc |
36884779 |
T |
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| Q |
117 |
tagttgattattacacnnnnnnngtgaatttccaatacaatctcaaattcgtattatttttcaagattttatcaaggtcttctcagcaaaaatgacaaaa |
216 |
Q |
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|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36884780 |
tagttgattattacacaaaaaaagtgaatttcaaatacaatctcaaattcgtattatttttcaagattttatcaaggtcttctcagcaaaaatgacaaaa |
36884879 |
T |
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| Q |
217 |
acagattatagagtgcctcactatccatatgcttctctgtataaattacctgtgct |
272 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
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| T |
36884880 |
acagattatagagtgccttactatccatatgcttctctgtataaattacctatgct |
36884935 |
T |
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