View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11849_high_27 (Length: 242)
Name: NF11849_high_27
Description: NF11849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11849_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 63 - 211
Target Start/End: Original strand, 38875137 - 38875285
Alignment:
| Q |
63 |
ctagtatgtattgtgtgtatatctattccaatattctatatagatgttgatcatagagcttaatgatcatgtgcagaacagcagtggcaatcacggatat |
162 |
Q |
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| T |
38875137 |
ctagtatgtattgtgtgtatatctattccaatattctatatagatgttgatcatagagcttaatgatcatgtgcagaacagcagtggcaatcacggatat |
38875236 |
T |
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| Q |
163 |
atggaggaacagaaagatattcctaacaacactatcccaaaccttcttt |
211 |
Q |
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| T |
38875237 |
atggaggaacagaaagatattcctaacaacactatcccaaaccttcttt |
38875285 |
T |
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