View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11849_high_28 (Length: 242)
Name: NF11849_high_28
Description: NF11849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11849_high_28 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 51822145 - 51822369
Alignment:
| Q |
1 |
ttcgccttttgaatctctgaacttacggaaccttctaactgattcaattcaacatcaattacttgaacattgggtaatccccaaataccggaaggaacgg |
100 |
Q |
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| T |
51822145 |
ttcgctttttgaatctctgaactaacggaaccttctaactgattcaattcaacatcaattacttgaacattgggtaatccccaaataccggaaggaacgg |
51822244 |
T |
|
| Q |
101 |
tacctgagagcgagtttctactcactctgaatcgttctaaactcaaacaggtgctgtagctttccggtatcttacctgtgagattgttctgaagaagaag |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51822245 |
tacctgagagcgagtttctactcactctgaggcgttctaaactcaaacaggtgctgtagctttccggtatcttacctgtgagattgttctgaagaagaag |
51822344 |
T |
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| Q |
201 |
aagtgcgtacatttttcctttgttg |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
51822345 |
aagtgcgtacatttttcctttgttg |
51822369 |
T |
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