View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11849_high_33 (Length: 214)

Name: NF11849_high_33
Description: NF11849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11849_high_33
NF11849_high_33
[»] chr4 (38 HSPs)
chr4 (1-196)||(1151300-1151493)
chr4 (32-153)||(52691086-52691207)
chr4 (35-119)||(8693688-8693772)
chr4 (38-113)||(12878222-12878297)
chr4 (37-120)||(33463392-33463475)
chr4 (37-120)||(51697893-51697976)
chr4 (84-158)||(32545032-32545106)
chr4 (35-120)||(5271453-5271538)
chr4 (35-120)||(31273497-31273582)
chr4 (35-120)||(47574601-47574686)
chr4 (35-119)||(13522026-13522110)
chr4 (37-120)||(37264600-37264683)
chr4 (35-120)||(19906227-19906312)
chr4 (35-120)||(13059386-13059471)
chr4 (37-114)||(32082126-32082203)
chr4 (35-116)||(42758789-42758870)
chr4 (35-120)||(55251696-55251780)
chr4 (37-120)||(19106595-19106678)
chr4 (37-120)||(31269010-31269093)
chr4 (37-120)||(37259913-37259996)
chr4 (37-106)||(51696992-51697061)
chr4 (70-130)||(6070553-6070613)
chr4 (36-120)||(8030511-8030595)
chr4 (44-120)||(47244224-47244300)
chr4 (37-120)||(16421005-16421088)
chr4 (37-120)||(31765862-31765945)
chr4 (37-127)||(2819813-2819903)
chr4 (35-119)||(12823929-12824013)
chr4 (70-113)||(12874522-12874565)
chr4 (41-120)||(13065808-13065887)
chr4 (90-186)||(23093106-23093198)
chr4 (70-120)||(5928288-5928338)
chr4 (65-107)||(10120872-10120914)
chr4 (37-95)||(31729423-31729481)
chr4 (70-120)||(32221166-32221216)
chr4 (65-106)||(48276708-48276749)
chr4 (70-106)||(19541230-19541266)
chr4 (73-162)||(55149540-55149631)
[»] chr6 (16 HSPs)
chr6 (36-121)||(24589199-24589284)
chr6 (35-120)||(2700140-2700225)
chr6 (38-120)||(21309007-21309089)
chr6 (35-120)||(8747758-8747843)
chr6 (70-158)||(9751879-9751966)
chr6 (35-114)||(19674295-19674374)
chr6 (35-120)||(29892295-29892380)
chr6 (37-120)||(11570785-11570868)
chr6 (37-120)||(11614128-11614211)
chr6 (37-120)||(20748320-20748403)
chr6 (42-120)||(6407901-6407979)
chr6 (70-113)||(2882824-2882867)
chr6 (37-114)||(12688953-12689030)
chr6 (35-120)||(33687637-33687722)
chr6 (65-113)||(11534742-11534790)
chr6 (65-113)||(11560252-11560300)
[»] chr1 (22 HSPs)
chr1 (35-120)||(19799047-19799132)
chr1 (37-120)||(3094090-3094173)
chr1 (37-120)||(10140065-10140148)
chr1 (38-187)||(8900161-8900312)
chr1 (37-120)||(10135432-10135515)
chr1 (35-106)||(39588401-39588472)
chr1 (35-114)||(47451259-47451338)
chr1 (38-120)||(25855147-25855229)
chr1 (37-120)||(23192853-23192936)
chr1 (37-120)||(40165956-40166039)
chr1 (35-114)||(47455420-47455499)
chr1 (35-112)||(16035592-16035669)
chr1 (36-120)||(16649648-16649731)
chr1 (37-120)||(38620669-38620751)
chr1 (70-120)||(11806335-11806385)
chr1 (35-113)||(12259979-12260057)
chr1 (65-107)||(19422941-19422983)
chr1 (35-120)||(33301214-33301299)
chr1 (76-119)||(18784623-18784666)
chr1 (37-120)||(26927758-26927841)
chr1 (67-100)||(25266538-25266571)
chr1 (37-113)||(27761874-27761951)
[»] chr8 (29 HSPs)
chr8 (36-185)||(24673360-24673505)
chr8 (37-120)||(4243090-4243173)
chr8 (35-120)||(31449900-31449985)
chr8 (84-152)||(12820292-12820360)
chr8 (37-120)||(4238351-4238434)
chr8 (37-152)||(15875704-15875818)
chr8 (37-120)||(44925959-44926042)
chr8 (37-114)||(40125921-40125998)
chr8 (37-113)||(34118449-34118525)
chr8 (37-120)||(1807448-1807531)
chr8 (35-142)||(17953907-17954014)
chr8 (37-120)||(40130722-40130805)
chr8 (38-120)||(1911006-1911088)
chr8 (15-120)||(17025911-17026014)
chr8 (15-120)||(17556403-17556506)
chr8 (35-120)||(33416523-33416608)
chr8 (39-127)||(19166603-19166691)
chr8 (37-120)||(24090603-24090686)
chr8 (35-106)||(28564855-28564926)
chr8 (35-106)||(28572478-28572549)
chr8 (35-114)||(18876401-18876479)
chr8 (37-120)||(28559690-28559773)
chr8 (37-120)||(38182273-38182355)
chr8 (35-186)||(2965545-2965691)
chr8 (42-158)||(7902503-7902617)
chr8 (88-190)||(5883904-5884007)
chr8 (37-120)||(23548668-23548751)
chr8 (88-174)||(27415430-27415515)
chr8 (35-112)||(2355493-2355570)
[»] chr7 (24 HSPs)
chr7 (37-152)||(4579453-4579567)
chr7 (35-186)||(15642148-15642295)
chr7 (37-152)||(23246969-23247083)
chr7 (35-120)||(44510711-44510796)
chr7 (35-119)||(9651001-9651085)
chr7 (65-174)||(10388429-10388534)
chr7 (1-152)||(29150882-29151026)
chr7 (37-112)||(44423173-44423248)
chr7 (41-120)||(4930209-4930288)
chr7 (37-120)||(13314272-13314355)
chr7 (37-120)||(26341175-26341258)
chr7 (35-120)||(8268269-8268354)
chr7 (65-120)||(3357696-3357751)
chr7 (65-120)||(27238218-27238273)
chr7 (35-113)||(8076033-8076111)
chr7 (36-117)||(25543397-25543478)
chr7 (70-142)||(16372353-16372424)
chr7 (35-99)||(23866065-23866129)
chr7 (37-112)||(9008147-9008222)
chr7 (38-120)||(42627234-42627317)
chr7 (70-120)||(12254055-12254105)
chr7 (36-101)||(14782823-14782886)
chr7 (36-101)||(15232852-15232915)
chr7 (38-120)||(30256830-30256912)
[»] chr2 (27 HSPs)
chr2 (35-120)||(28603274-28603359)
chr2 (37-120)||(9180760-9180843)
chr2 (37-120)||(30650905-30650988)
chr2 (37-120)||(31326715-31326798)
chr2 (65-187)||(19094559-19094681)
chr2 (38-120)||(19892503-19892585)
chr2 (35-120)||(1935027-1935112)
chr2 (37-120)||(9189839-9189922)
chr2 (37-120)||(10160760-10160843)
chr2 (37-120)||(25478333-25478416)
chr2 (37-107)||(160030-160100)
chr2 (71-173)||(15444130-15444232)
chr2 (38-120)||(29677357-29677439)
chr2 (37-187)||(19578450-19578596)
chr2 (35-120)||(35601898-35601983)
chr2 (37-120)||(30658239-30658322)
chr2 (70-152)||(32079321-32079404)
chr2 (37-114)||(18344413-18344490)
chr2 (35-120)||(35639031-35639116)
chr2 (35-114)||(12796907-12796986)
chr2 (37-120)||(25497361-25497444)
chr2 (76-170)||(13291614-13291708)
chr2 (70-120)||(42926830-42926880)
chr2 (67-120)||(30631555-30631608)
chr2 (35-114)||(7737885-7737964)
chr2 (70-120)||(29677743-29677793)
chr2 (60-100)||(21207109-21207149)
[»] chr3 (28 HSPs)
chr3 (37-120)||(758404-758487)
chr3 (37-120)||(3033618-3033701)
chr3 (37-120)||(3672560-3672643)
chr3 (37-120)||(3692592-3692675)
chr3 (37-120)||(49971460-49971543)
chr3 (35-120)||(3657274-3657359)
chr3 (35-120)||(7571252-7571337)
chr3 (40-120)||(29715618-29715698)
chr3 (37-120)||(14438731-14438814)
chr3 (37-120)||(18467199-18467282)
chr3 (37-120)||(23666159-23666242)
chr3 (37-120)||(24038407-24038490)
chr3 (35-120)||(8069654-8069738)
chr3 (35-120)||(8883144-8883229)
chr3 (35-120)||(8887904-8887989)
chr3 (109-186)||(16013644-16013721)
chr3 (37-113)||(55431296-55431372)
chr3 (37-120)||(3418969-3419052)
chr3 (37-120)||(39775764-39775847)
chr3 (35-121)||(12971667-12971753)
chr3 (35-120)||(12112675-12112760)
chr3 (35-120)||(12965907-12965992)
chr3 (97-152)||(20507598-20507653)
chr3 (37-120)||(20520028-20520111)
chr3 (37-120)||(29350214-29350297)
chr3 (71-120)||(18471982-18472031)
chr3 (65-107)||(26962049-26962091)
chr3 (44-114)||(27708858-27708928)
[»] chr5 (29 HSPs)
chr5 (37-120)||(7451734-7451817)
chr5 (37-120)||(36942301-36942384)
chr5 (37-120)||(37652866-37652949)
chr5 (35-120)||(39523025-39523110)
chr5 (37-120)||(26667248-26667331)
chr5 (37-120)||(26938845-26938928)
chr5 (37-120)||(29168009-29168092)
chr5 (37-120)||(36937547-36937630)
chr5 (35-120)||(6155453-6155538)
chr5 (35-120)||(12045173-12045258)
chr5 (39-120)||(39518386-39518467)
chr5 (35-120)||(40147871-40147956)
chr5 (35-120)||(41587194-41587279)
chr5 (35-120)||(42001410-42001495)
chr5 (37-120)||(556671-556754)
chr5 (37-120)||(561443-561526)
chr5 (37-120)||(12103001-12103084)
chr5 (37-120)||(37248831-37248914)
chr5 (35-120)||(41996641-41996726)
chr5 (38-113)||(12501936-12502011)
chr5 (37-120)||(36423613-36423696)
chr5 (65-120)||(36428685-36428740)
chr5 (37-119)||(3665909-3665991)
chr5 (35-117)||(16116283-16116365)
chr5 (37-121)||(12102867-12102951)
chr5 (37-120)||(10759856-10759938)
chr5 (88-142)||(15148532-15148586)
chr5 (54-146)||(22974980-22975071)
chr5 (35-99)||(32461583-32461647)
[»] scaffold0352 (1 HSPs)
scaffold0352 (37-120)||(7080-7163)
[»] scaffold0182 (1 HSPs)
scaffold0182 (37-120)||(9923-10006)
[»] scaffold0045 (1 HSPs)
scaffold0045 (37-119)||(83043-83125)
[»] scaffold0184 (1 HSPs)
scaffold0184 (65-140)||(2265-2340)
[»] scaffold0002 (1 HSPs)
scaffold0002 (37-120)||(4050-4133)
[»] scaffold0011 (1 HSPs)
scaffold0011 (65-158)||(155559-155652)
[»] scaffold0240 (1 HSPs)
scaffold0240 (70-186)||(3904-4017)
[»] scaffold0054 (1 HSPs)
scaffold0054 (35-120)||(25375-25460)
[»] scaffold0012 (1 HSPs)
scaffold0012 (35-105)||(166120-166190)
[»] scaffold0057 (1 HSPs)
scaffold0057 (37-113)||(35617-35693)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 1151300 - 1151493
Alignment:
Q  1 tttatattggaggccgacgtgattgatagttatagtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacc 100  Q
    |||||| |||||| || |||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| |||||||||    
T  1151300 tttatactggagggcggcgtgattgatagtta--gtcttgcacaattttggatagtgtcatgaaacgtcttaaagagagtgatctgatcgcgactcaacc 1151397  T
Q  101 tagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaacaccatataaac 196  Q
    |||||| |||||||||| || |||||||||||||||||||||||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  1151398 tagtaacaacttcgataaataaaaattcattttcaaaatagactttgaaaatttaaatacaacaatttaaaaatccaaaaccaacaccatataaac 1151493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 52691086 - 52691207
Alignment:
Q  32 atagtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcatt 131  Q
    ||||||||||||||||||||  || ||||  | |||| |||||||||||||| |||||||||||||||||||| |||| || ||| ||||||||||||||    
T  52691086 atagtcttgcacaattttgggcagagtcacaaaacgtcttaaagagagcgatatgatcgtgactcaacctagttataattttgatggatgaaaattcatt 52691185  T
Q  132 ttcaaaatagactttggaaatt 153  Q
    ||||||||||| ||| ||||||    
T  52691186 ttcaaaatagatttttgaaatt 52691207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 35 - 119
Target Start/End: Complemental strand, 8693772 - 8693688
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    ||||||||||||||||| ||| | || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  8693772 gtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgataga 8693688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 12878297 - 12878222
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    ||||||||||||| | ||||||| || |||| ||||||||||||| ||||||||||||||||||||||| ||||||    
T  12878297 ttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacctagtaacaacttc 12878222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 33463392 - 33463475
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||| |||||| |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  33463392 cttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 33463475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 51697976 - 51697893
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||   |||||||||| |||| ||||| ||||||||||| ||||||||||||||||||| ||||||| |||||    
T  51697976 cttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggtcgtgactcaacctagtaacaacttcggtagat 51697893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 32545106 - 32545032
Alignment:
Q  84 ctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaat 158  Q
    ||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||| ||||||| |||||| ||||    
T  32545106 ctgatcgtgactcaacctagtaacaacttcagtagataaaaattcattttcaaaacagactttagaaattgaaat 32545032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 5271453 - 5271538
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  5271453 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 5271538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 31273582 - 31273497
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  31273582 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 31273497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 47574686 - 47574601
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||||| |||||||| || |||| ||||||||||||| ||||| ||||||||||||| ||| || |||| |||||    
T  47574686 gtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactcaacctaataacaaattcggtagat 47574601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 13522026 - 13522110
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  13522026 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtaga 13522110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 37264600 - 37264683
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||| ||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  37264600 cttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 37264683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 19906312 - 19906227
Alignment:
Q  35 gtcttgcacaattttggatagtgtca-tgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||| || ||||||| ||| |||| ||||| ||||||| ||||||||||||||||||| ||||||||||| |||||    
T  19906312 gtcttgcacaattttagacagtgtcactga-acgtcttaaaaagagcgacctgatcgtgactcaacctaataataacttcggtagat 19906227  T

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Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 13059471 - 13059386
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||    |||| || || |||| ||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  13059471 gtcttgcacaattttatgcagtgccacgaaacgtcttaaagagagcgatctggtcatgactcaacctagtaataacttcggtagat 13059386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 32082126 - 32082203
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||| |||| ||||| | || ||||| |||| |||||| ||||||||||||||||||| |||||||    
T  32082126 cttgcacaattttggacagtgccatgaaatgtcttaaaaagagtgatctggtcgtgactcaacctagtaacaacttcg 32082203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 42758789 - 42758870
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgat 116  Q
    |||||||||||||||||  |||| || || || | ||||||||||||| ||| ||||||||||||||||||| |||||||||    
T  42758789 gtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgat 42758870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 55251780 - 55251696
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||| |||| || || |||| ||||| ||||||| ||| ||||||||||||||||||| |||||| ||||||    
T  55251780 gtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcaatagat 55251696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 19106678 - 19106595
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  ||||  |||| |||| ||||||| ||||||||| | ||||||||||||||||| ||||||| |||||    
T  19106678 cttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactcaacctagtaacaacttcggtagat 19106595  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 31269093 - 31269010
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| |  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  31269093 cttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 31269010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 37259913 - 37259996
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  ||||| || || |||| ||||||| ||||| ||| ||||||||||||||||||| ||||||| |||||    
T  37259913 cttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgactcaacctagtaacaacttcggtagat 37259996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 51697061 - 51696992
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaa 106  Q
    |||||||||||||||  |||| ||||| |||| |||| |||||||| ||| |||||||||||||||||||    
T  51697061 cttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacctagtaa 51696992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 6070613 - 6070553
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcat 130  Q
    ||||||||||||||||| || |||||||| ||||||| ||||| | |||||||||||||||    
T  6070613 ttaaagagagcgatctggtcatgactcaatctagtaacaactttggtagatgaaaattcat 6070553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 8030511 - 8030595
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||||  |||| ||  | |||| ||||||||||||| ||||| |||| |||||||||||| ||||||| |||||    
T  8030511 tcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctgattgtgattcaacctagtaacaacttcggtagat 8030595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 47244300 - 47244224
Alignment:
Q  44 aattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||| | |||| || || |||| |||||||| |||| ||||||||||||||||||| ||| |||||||||||||    
T  47244300 aattttgaacagtgccacgaaacgtcttaaagagggcgacctgatcgtgactcaacctactaacaacttcgatagat 47244224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 16421088 - 16421005
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || | || |||| |||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  16421088 cttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 16421005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 31765945 - 31765862
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| |||||||||| || ||| | ||||||||||||||||| ||||||| |||||    
T  31765945 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgactcaacctagtaacaacttcggtagat 31765862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 2819903 - 2819813
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaatt 127  Q
    |||||||||||||||| |||  || || || | ||||||| | ||| ||| ||||||||||| ||||||| ||||||||||||| ||||||    
T  2819903 cttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaatctagtaacaacttcgatagataaaaatt 2819813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 12823929 - 12824013
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    |||||||||||||||||  |||| || || | || ||||||||||||| ||| || |||||||||||| ||| ||||||| ||||    
T  12823929 gtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactcaacctaataacaacttcggtaga 12824013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 12874565 - 12874522
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||    
T  12874565 ttaaagagagcgatctgattgtgactcaacctaataacaacttc 12874522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 13065808 - 13065887
Alignment:
Q  41 cacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||| |||||  |||| ||||| |||| |||||||||||||  |  ||||||||||||||||||| ||||||| |||||    
T  13065808 cacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaacaacttcggtagat 13065887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 186
Target Start/End: Complemental strand, 23093198 - 23093106
Alignment:
Q  90 gtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaaca 186  Q
    |||||||||| |||||| |||||||||| ||    |||| ||||||||||||| |||||||||  |||| |||||||||  |||| |||||| ||||    
T  23093198 gtgactcaacttagtaacaacttcgatatat----attctttttcaaaatagaatttggaaatccaaatacaacagttttgaaatccaaaactaaca 23093106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 5928288 - 5928338
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| ||| |||||||||||||| |||| ||||||| |||||    
T  5928288 ttaaagagagcgacctggtcgtgactcaacctggtaacaacttcggtagat 5928338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 10120872 - 10120914
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaat 107  Q
    |||| ||||||||||||| |||||||||||||||||| |||||    
T  10120872 acgtcttaaagagagcgacctgatcgtgactcaacctggtaat 10120914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 31729423 - 31729481
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgact 95  Q
    ||||||||||||||| ||||| || || |||| ||||||||||||| |||||| |||||    
T  31729423 cttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgact 31729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 32221166 - 32221216
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| ||| ||||||||||||||||||| || |||| |||||    
T  32221166 ttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagat 32221216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 48276708 - 48276749
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaa 106  Q
    |||| ||||||||||||| |||||||||| ||||||||||||    
T  48276708 acgtcttaaagagagcgacctgatcgtgattcaacctagtaa 48276749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 19541230 - 19541266
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaa 106  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  19541230 ttaaaaagaacgatctgatcgtgactcaacctagtaa 19541266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 55149631 - 55149540
Alignment:
Q  73 aagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagac--tttggaaatttaaatgcaa 162  Q
    ||||||| || ||| ||||||||||||||||| | || ||| ||||||||||| || ||||||| ||| ||  |||||||||  ||||||||    
T  55149631 aagagagtgaactggtcgtgactcaacctagtgacaatttcaatagatgaaaaatctttttcaatataaacagtttggaaatccaaatgcaa 55149540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 24589199 - 24589284
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatg 121  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  24589199 tcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactcaacttagtaacaacttcgatagatg 24589284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 2700140 - 2700225
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| | |||| || || |||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  2700140 gtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagat 2700225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 21309089 - 21309007
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  |||| ||||| |||| |||||||||||||| || | ||||||||||||||||| |||||||||||||    
T  21309089 ttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgatatggtagtgactcaacctagtaacaacttcgatagat 21309007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 8747843 - 8747758
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  ||||||| |  |||| ||||||||||||| ||| ||||||||||||||||||| |||||| ||||||    
T  8747843 gtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcaatagat 8747758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 9751879 - 9751966
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaat 158  Q
    ||||||||||||| ||  ||||||||||||||||| | ||||| | ||||||||||||| |||||||||||||||||| ||||| ||||    
T  9751879 ttaaagagagcga-ctattcgtgactcaacctagtgacaactttggtagatgaaaattccttttcaaaatagactttgaaaattcaaat 9751966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 19674374 - 19674295
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||||  |||| ||||| |||| |||||||||| || ||| ||||||||||||||||||| |||||||    
T  19674374 gtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcg 19674295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 29892295 - 29892380
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| ||  | || | ||||||||||||| |||| |||||||||||||||||| |||||||||||||    
T  29892295 gtcttgcacaattttgggcagtgccaccaaacttcttaaagagagcgacctgaccgtgactcaacctagtaacaacttcgatagat 29892380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 11570785 - 11570868
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| | ||||||||||||||||| ||||||| |||||    
T  11570785 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacctagtaacaacttcggtagat 11570868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 11614128 - 11614211
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||   |||| ||| | |||||||||||||| | | || |||||||||||||||||||| |||||||||||||    
T  11614128 cttgcacaattttgagcagtgccataaaacgttttaaagagaacaacctcatcgtgactcaacctagtaacaacttcgatagat 11614211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 20748320 - 20748403
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| |||  ||||| || | |||||||| |||| ||| ||||||||||||||||||| ||||| |||||||    
T  20748320 cttgcacaattttggacagtaccatgaaacatgttaaagagggcgacctggtcgtgactcaacctagtaacaactttgatagat 20748403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 120
Target Start/End: Original strand, 6407901 - 6407979
Alignment:
Q  42 acaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||  |||| || || |||| || |||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  6407901 acaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagat 6407979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 113
Target Start/End: Original strand, 2882824 - 2882867
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||||||||||||| || ||||||||||||||||||| ||||||    
T  2882824 ttaaagagagcgatatggtcgtgactcaacctagtaacaacttc 2882867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 12689030 - 12688953
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||  ||| |||  | |||| |||||||||| || ||| || |||||||||||||||| |||||||    
T  12689030 cttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactcaacctagtaacaacttcg 12688953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 33687637 - 33687722
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| | || |||||||||| ||| || |||| |||||    
T  33687637 gtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggtaactcaacctaataacaatttcggtagat 33687722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 11534742 - 11534790
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||| ||||||||||||| ||| || |||||||||||||||| ||||||    
T  11534742 acgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttc 11534790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 11560252 - 11560300
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||| ||||||||||||| ||| || |||||||||||||||| ||||||    
T  11560252 acgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttc 11560300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 2e-29; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 19799047 - 19799132
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19799047 gtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaacctagtaacaacttcgatagat 19799132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 3094173 - 3094090
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  3094173 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 3094090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 10140148 - 10140065
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  ||||| || || |||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  10140148 cttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgactcaacctagtaacaacttcggtagat 10140065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 8900312 - 8900161
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattc-attttcaa 136  Q
    |||||||| ||| || |||||||  | ||||||||||||||||||| || ||||||||||||||||||| ||||||| |||||     |||  |||| ||    
T  8900312 ttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggtcgtgactcaacctagtaacaacttcggtagatattctttctttttttaa 8900213  T
Q  137 aat-agactttggaaatttaaatgcaacagtttaaaaattcaaaaccaacac 187  Q
    ||| | | |||||||||| |||||||||||||| ||||| ||||| ||||||    
T  8900212 aataacaatttggaaattcaaatgcaacagtttgaaaatccaaaaacaacac 8900161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 10135515 - 10135432
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| | ||||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  10135515 cttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 10135432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 39588401 - 39588472
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaa 106  Q
    |||||||||||||||||| |||| || || |||| ||||||||||||| |||||||||||| ||||||||||    
T  39588401 gtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacctagtaa 39588472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 47451259 - 47451338
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    ||||||||||||||| |  |||| ||||| |||| ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  47451259 gtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaataatttcg 47451338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 25855229 - 25855147
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 25855147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 23192853 - 23192936
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||| ||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  23192853 cttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 23192936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 40166039 - 40165956
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| |||||||||||||  || ||||||||||||||||||| ||||||| |||||    
T  40166039 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagat 40165956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 47455420 - 47455499
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||||| | || || || |||| ||||||||||||| ||| ||||||||||||||| ||| |||||||    
T  47455420 gtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctaataacaacttcg 47455499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 16035669 - 16035592
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataactt 112  Q
    ||||||||||| |||||| |||| || || |||| |||||||| |||| ||| ||||||||||||||||||| |||||    
T  16035669 gtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactcaacctagtaacaactt 16035592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 16649648 - 16649731
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||||| |||| ||  | |||| ||||||||||||| ||| |||||||||||| |||||| ||||||| |||||    
T  16649648 tcttgcacaattttggacagtgccacaa-acgtcttaaagagagcgacctggtcgtgactcaacttagtaacaacttcggtagat 16649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 38620751 - 38620669
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| | || || || |||| |||||||||| |||||| ||| ||||||||||| ||||||||||| |||||    
T  38620751 cttgcacaattttggacaatg-cacgaaacgtcttaaagagagtgatctggtcgcgactcaacctaataataacttcggtagat 38620669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 11806385 - 11806335
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||||| | ||||||||||||| ||| |||||||||||||    
T  11806385 ttaaagagagcgatctggttgtgactcaacctaataacaacttcgatagat 11806335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 12260057 - 12259979
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||||||||||||||||  ||||||| || |||| |||||||||||||  || ||||| ||||||| ||||| ||||||    
T  12260057 gtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctcaaccaagtaacaacttc 12259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 107
Target Start/End: Original strand, 19422941 - 19422983
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaat 107  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  19422941 acgtcttaaagagagcgatctgatcgtgactcaacccagtaat 19422983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 33301214 - 33301299
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||| ||| ||| |||||| |||| ||||||| ||||| |||||||    
T  33301214 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgattcaagctagtaacaactttgatagat 33301299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 18784623 - 18784666
Alignment:
Q  76 agagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||    
T  18784623 agagcgacctgatcgtgactcaacctagtaacaacttcgctaga 18784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 26927758 - 26927841
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  | || || || |||| |||||||||||||  |  ||||||||||||||||||| ||||||| |||||    
T  26927758 cttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgacttagtcgtgactcaacctagtaacaacttcggtagat 26927841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 25266538 - 25266571
Alignment:
Q  67 gttttaaagagagcgatctgatcgtgactcaacc 100  Q
    ||||||||||||| ||||||||||||||||||||    
T  25266538 gttttaaagagagtgatctgatcgtgactcaacc 25266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 113
Target Start/End: Original strand, 27761874 - 27761951
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatc-gtgactcaacctagtaataacttc 113  Q
    |||||||||||||||| |||| || || ||||||||||||||| || ||  || | ||||||||||||||||| ||||    
T  27761874 cttgcacaattttggacagtgccacgaaacgttttaaagagagtgacctagtctgcgactcaacctagtaatatcttc 27761951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 9e-29; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 36 - 185
Target Start/End: Original strand, 24673360 - 24673505
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttca 135  Q
    ||||||| ||||||| | ||||||| || |||||||||| |||||||||||||||| |||||||||||||| ||||||||||    || ||||  ||| |    
T  24673360 tcttgcataattttgaacagtgtcacgaaacgttttaaaaagagcgatctgatcgtaactcaacctagtaacaacttcgata----aatattctctttta 24673455  T
Q  136 aaatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaac 185  Q
    ||||||| |||| ||| |||||| ||||||||||||||| ||||||||||    
T  24673456 aaatagaatttgaaaacttaaatacaacagtttaaaaatccaaaaccaac 24673505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 4243090 - 4243173
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  4243090 cttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 4243173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 31449900 - 31449985
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  31449900 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 31449985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 84 - 152
Target Start/End: Complemental strand, 12820360 - 12820292
Alignment:
Q  84 ctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaat 152  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||| |||||||||    
T  12820360 ctgatcgtgactcaacctagtaacaacctcggtagatgaaaattccttttcaaaatagattttggaaat 12820292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 4238351 - 4238434
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  4238351 cttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 4238434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 15875704 - 15875818
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaa 136  Q
    |||||||||||||||  |||| || || ||||  |||||||||||| ||| |||| ||||||  |||||| ||||||||||||||||||||  |||||||    
T  15875704 cttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactcaatttagtaacaacttcgatagatgaaaattacttttcaa 15875803  T
Q  137 aatagactttggaaat 152  Q
    |||||| |||||||||    
T  15875804 aataga-tttggaaat 15875818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 44925959 - 44926042
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  44925959 cttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 44926042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 40125921 - 40125998
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||  |||| || || |||| ||||||||||||||||| ||||||||||||||||||| |||||||    
T  40125921 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcg 40125998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 34118525 - 34118449
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||    
T  34118525 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 34118449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 1807531 - 1807448
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  ||||||| || |||| ||||||||||||| ||  ||||||||||||||||||| ||||||| |||||    
T  1807531 cttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactcaacctagtaacaacttcggtagat 1807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 17953907 - 17954014
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttc 134  Q
    |||||||||||||||||  |||| || || |||| ||||||| |||||  || |||| |||||||||||||| ||||||| |||||||||||   |||||    
T  17953907 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactcaacctagtaacaacttcggtagatgaaaatcatttttc 17954006  T
Q  135 aaaataga 142  Q
    ||||||||    
T  17954007 aaaataga 17954014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 40130722 - 40130805
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 40130805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 1911006 - 1911088
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||  ||||| || || |||| ||||||||||||| |||||||||||| |||||| ||| |||||||||||||    
T  1911006 ttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacctaataacaacttcgatagat 1911088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 17026014 - 17025911
Alignment:
Q  15 cgacgtgattgatagttatagtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    ||||||||||||||||    |||||||||||| ||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||    
T  17026014 cgacgtgattgatagtct--gtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 17025917  T
Q  115 atagat 120  Q
     |||||    
T  17025916 gtagat 17025911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 17556506 - 17556403
Alignment:
Q  15 cgacgtgattgatagttatagtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    ||||||||||||||||    |||||||||||| ||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||    
T  17556506 cgacgtgattgatagtct--gtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcg 17556409  T
Q  115 atagat 120  Q
     |||||    
T  17556408 gtagat 17556403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 33416608 - 33416523
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||| ||| ||| ||||||||||||||||||| ||||||| |||||    
T  33416608 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgactcaacctagtaacaacttcggtagat 33416523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 19166691 - 19166603
Alignment:
Q  39 tgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaatt 127  Q
    |||||||||||||  |||| || || |||| |||||||||||||  || ||||||||||||||||||| ||||||| ||||| ||||||    
T  19166691 tgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcggtagataaaaatt 19166603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 24090686 - 24090603
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||| |||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  24090686 cttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 24090603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 28564855 - 28564926
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaa 106  Q
    |||||| |||||||||   |||||||||| | |||||| ||||||||| |||||||||||||||||||||||    
T  28564855 gtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacctgatcgtgactcaacctagtaa 28564926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 106
Target Start/End: Original strand, 28572478 - 28572549
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaa 106  Q
    |||||| |||||||||   |||||||||| | |||||| ||||||||| |||||||||||||||||||||||    
T  28572478 gtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacctgatcgtgactcaacctagtaa 28572549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 18876401 - 18876479
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||||  |||| || || |||| ||||| ||||||| ||| ||||||||||||||||||| |||||||    
T  18876401 gtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcg 18876479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 28559690 - 28559773
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| |||| || || |||| ||| |||||||||  |  ||||||||||||||||||| ||||||| |||||    
T  28559690 cttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactcaacctagtaacaacttcggtagat 28559773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 38182273 - 38182355
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||| ||||  |||| || || |||||||||||||||||| ||| |||||||||||||| |||| ||||||| |||||    
T  38182273 cttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaacct-gtaacaacttcggtagat 38182355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 2965691 - 2965545
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttc 134  Q
    ||||||||||||||| |  |||| || || |||||||||||||||||| ||| ||||||||| ||||||||| || || | | |||    |||  |||||    
T  2965691 gtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactc-acctagtaacaaatttggtggat----atttcttttc 2965597  T
Q  135 aaaatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaaca 186  Q
    |||||||| |||||||||| |||| || ||||||  |||| ||||| |||||    
T  2965596 aaaatagaatttggaaattcaaatacagcagtttcgaaatccaaaaacaaca 2965545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 158
Target Start/End: Complemental strand, 7902617 - 7902503
Alignment:
Q  42 acaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatag 141  Q
    |||||||||| || ||||| || || |||||||||||||||  || ||||||||||| | | ||||||||| |  |||||||||||| |||| ||||| |    
T  7902617 acaattttgggtaatgtcacgaaacattttaaagagagcgacttggtcgtgactcaatc-aataataactttggcagatgaaaattc-tttttaaaatgg 7902520  T
Q  142 actttggaaatttaaat 158  Q
    ||||| |||||| ||||    
T  7902519 actttagaaattcaaat 7902503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 190
Target Start/End: Complemental strand, 5884007 - 5883904
Alignment:
Q  88 tcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaaaaattc-aaaaccaaca 186  Q
    ||||||||||||| ||||||||||| | |  |||||||||| |||| | |||||| | || ||||  |||| ||| ||||| ||||||| ||||||||||    
T  5884007 tcgtgactcaacccagtaataactttggtgaatgaaaattctttttgagaatagattctgaaaatccaaatacaatagtttgaaaattcaaaaaccaaca 5883908  T
Q  187 ccat 190  Q
    ||||    
T  5883907 ccat 5883904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 23548668 - 23548751
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||  | |||| || || |||| ||| ||||||||| | | ||||||||||||||||||| ||||||| |||||    
T  23548668 cttgcacaattttacacagtgccacgaaacgtcttatagagagcgaccaggtcgtgactcaacctagtaacaacttcggtagat 23548751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 27415515 - 27415430
Alignment:
Q  88 tcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaaaaat 174  Q
    ||||||||||||| | ||||||||||| | ||  ||||||| |||||||||||||||||| |||| ||||  ||| |||||| ||||    
T  27415515 tcgtgactcaaccaa-taataacttcggtggacaaaaattctttttcaaaatagactttgaaaatataaacacaatagtttagaaat 27415430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 2355493 - 2355570
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataactt 112  Q
    |||||||||||||||| | ||||||| || |||| ||||| |||| ||| || | ||||||||| ||||||| |||||    
T  2355493 gtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagtgatatggtggtgactcaatctagtaacaactt 2355570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 37 - 152
Target Start/End: Complemental strand, 4579567 - 4579453
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaa 136  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  4579567 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagatgaaaattatttttcaa 4579468  T
Q  137 aatagactttggaaat 152  Q
    |||||| |||||||||    
T  4579467 aataga-tttggaaat 4579453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 186
Target Start/End: Complemental strand, 15642295 - 15642148
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttc 134  Q
    ||||| ||||||||||||||||||||||| |||| ||||| ||||||| ||||||||||| |||    |||| ||||||| |||||    |||| |||||    
T  15642295 gtcttccacaattttggatagtgtcatgaaacgtcttaaaaagagcgacctgatcgtgacacaattctgtaacaacttcggtagat----attctttttc 15642200  T
Q  135 aaaatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaaca 186  Q
    |||||||| |||| ||||  |||| || |||||||||||| |||||| ||||    
T  15642199 aaaatagaatttgaaaatccaaatacagcagtttaaaaatccaaaacaaaca 15642148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 23246969 - 23247083
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaa 136  Q
    |||||||||||||||  |||| || || || | ||||||||||||| ||| ||||||||||| ||||||| ||||||| ||||||||||||  |||||||    
T  23246969 cttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaatctagtaacaacttcggtagatgaaaattatttttcaa 23247068  T
Q  137 aatagactttggaaat 152  Q
    ||| || |||||||||    
T  23247069 aattga-tttggaaat 23247083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 44510711 - 44510796
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||| |||| ||  | |||| ||||||||||| ||||| ||||||||||||||||||| ||||||| |||||    
T  44510711 gtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactcaacctagtaacaacttcggtagat 44510796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 9651001 - 9651085
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  9651001 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtaga 9651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 10388429 - 10388534
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaaca 164  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    |||| ||||||||||||| |||||||||  |||| |||||    
T  10388429 acgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat----attctttttcaaaatagaatttggaaatccaaatacaaca 10388524  T
Q  165 gtttaaaaat 174  Q
    | || |||||    
T  10388525 gcttgaaaat 10388534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 29151026 - 29150882
Alignment:
Q  1 tttatattggaggccgacgtgattgatagttatagtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacc 100  Q
    ||||| |||||||| |||||| |||||||||   | ||||||||||||||   ||||||| || |||| ||||| ||||||||||| |||||||||||||    
T  29151026 tttatcttggaggc-gacgtggttgatagttt--gccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaacc 29150930  T
Q  101 tagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaat 152  Q
    |||||| ||||||| || ||    |||| ||||||||||||| |||| ||||    
T  29150929 tagtaacaacttcggtatat----attctttttcaaaatagaatttgaaaat 29150882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 44423173 - 44423248
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataactt 112  Q
    |||| ||||||||||  |||| || || |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  44423173 cttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaacctagtaacaactt 44423248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 4930288 - 4930209
Alignment:
Q  41 cacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  4930288 cacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 4930209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 13314272 - 13314355
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||  || || |||| ||||||||||||||||| ||||||||||||||||||| |||| || |||||    
T  13314272 cttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaactacggtagat 13314355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 26341258 - 26341175
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || | || ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  26341258 cttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 26341175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 8268354 - 8268269
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||| |||| ||  | |||| ||||||||||||| ||| |||||||||||  |||||| ||||||| |||||    
T  8268354 gtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaacttcggtagat 8268269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 3357696 - 3357751
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  3357696 acgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 3357751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 27238273 - 27238218
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| |||||| ||||||    
T  27238273 acgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttccatagat 27238218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 8076111 - 8076033
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    ||||||||||||||| |  |||| || || |||| ||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  8076111 gtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacccagtaacaacttc 8076033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 25543397 - 25543478
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgata 117  Q
    |||||||||||||| |  |||  || || |||| |||||||| |||| ||||| ||||||||||||||||| ||||||||||    
T  25543397 tcttgcacaattttaggcagtaccacgaaacgtcttaaagagtgcgacctgattgtgactcaacctagtaacaacttcgata 25543478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 142
Target Start/End: Complemental strand, 16372424 - 16372353
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaataga 142  Q
    |||||||||||||  || ||||||||||||||||||| ||||||  ||||||||| ||  |||||||||||||    
T  16372424 ttaaagagagcgacttggtcgtgactcaacctagtaacaacttc-ttagatgaaagttatttttcaaaataga 16372353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 23866129 - 23866065
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaac 99  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||    
T  23866129 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 9008222 - 9008147
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataactt 112  Q
    ||||||||||||||  ||||||||  | |||| |||||||||| ||  || ||||||||||||||||||| |||||    
T  9008222 cttgcacaattttgagtagtgtcactaaacgtcttaaagagagggacatggtcgtgactcaacctagtaacaactt 9008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 42627234 - 42627317
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacct-agtaataacttcgatagat 120  Q
    |||||||||||||| | ||| || || |||| ||||||||||||| ||| |||||| ||||||| ||||| ||||||| |||||    
T  42627234 ttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacctaagtaacaacttcggtagat 42627317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 12254105 - 12254055
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| ||| ||| |||||||||| |||| |||||||||||||    
T  12254105 ttaaagagagcgacctggtcgcgactcaacctggtaacaacttcgatagat 12254055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 14782886 - 14782823
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacct 101  Q
    ||||||||||||||||||||||| | || | || ||||  |||||||||| |||||||||||||||    
T  14782886 tcttgcacaattttggatagtgttacgaaatgtcttaa--agagcgatctaatcgtgactcaacct 14782823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 15232915 - 15232852
Alignment:
Q  36 tcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacct 101  Q
    ||||||||||||||||||||||| | || | || ||||  |||||||||| |||||||||||||||    
T  15232915 tcttgcacaattttggatagtgttacgaaatgtcttaa--agagcgatctaatcgtgactcaacct 15232852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 30256912 - 30256830
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  |||| || || | || ||||| | ||||||||| |||||||||||||| |||| ||||||| |||||    
T  30256912 ttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggtcgtgactcaaccttgtaaaaacttcggtagat 30256830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 1e-24; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 28603359 - 28603274
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  28603359 gtcttgcacaattttggacagtgtcacgaaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 28603274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 9180760 - 9180843
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  9180760 cttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 9180843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 30650988 - 30650905
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  30650988 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagat 30650905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 31326798 - 31326715
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  31326798 cttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 31326715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 19094559 - 19094681
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaaca 164  Q
    ||||||||| |||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||  |||| |||||||| |||  ||    |||| |||||    
T  19094559 acgttttaaggagagcgacctgatcgtgactcaacctaataacaacttcggtagatgaaaattattttttaaaatagattttaaaatccaaaatacaaca 19094658  T
Q  165 gtttaaaaattcaaaaccaacac 187  Q
    ||||| |||| ||||| ||||||    
T  19094659 gtttagaaatccaaaaacaacac 19094681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 19892503 - 19892585
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||| |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  19892503 ttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 19892585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 1935027 - 1935112
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  1935027 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 1935112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 9189839 - 9189922
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| |||| || || |||| ||||||||||| | ||| ||||||||||||||||||| ||||||| |||||    
T  9189839 cttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagat 9189922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 10160760 - 10160843
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  10160760 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 10160843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 25478333 - 25478416
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  ||||||| || |||| ||||||||||||| ||| | ||||||||||||||||| ||||||| |||||    
T  25478333 cttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgactcaacctagtaacaacttcggtagat 25478416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 160100 - 160030
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaat 107  Q
    ||||||||||||||| ||||||| ||| |||| ||||||||||||| ||| ||||| ||||||||||||||    
T  160100 cttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacctagtaat 160030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 15444130 - 15444232
Alignment:
Q  71 taaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaa 170  Q
    ||||||||| ||| | |||||||||||||| || ||||||||||||| |||||||||  ||||||| |||||||||  ||||| ||||  |||||||| |    
T  15444130 taaagagagtgatataatcgtgactcaacccagaaataacttcgataaatgaaaattatttttcaatatagactttaaaaattcaaatataacagtttga 15444229  T
Q  171 aaa 173  Q
    |||    
T  15444230 aaa 15444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 29677439 - 29677357
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  |||| || || |||| |||||||||||||  |||||||||||||||||||||| ||||||| |||||    
T  29677439 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactcaacctagtaacaacttcgctagat 29677357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 19578450 - 19578596
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaa 136  Q
    ||||||||||||| | ||||| ||  | |||| ||||||||||||||||| ||||||||||||||| ||| ||||||| |||||    ||||  ||||||    
T  19578450 cttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaacctaataacaacttcggtagat----attctctttcaa 19578545  T
Q  137 aatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaacac 187  Q
    | |||| |||| ||||  |||| ||| |||||  |||| ||||||||||||    
T  19578546 agtagaatttgaaaatccaaatacaatagtttggaaatccaaaaccaacac 19578596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 35601983 - 35601898
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||| |||| || || |||| ||||| ||||||| ||| |||||| |||||||||||| ||||||| |||||    
T  35601983 gtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtgattcaacctagtaacaacttcggtagat 35601898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 30658322 - 30658239
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||  ||||| || || |||| ||||||||||||| ||| |||||||||||| |||||| ||||||| |||||    
T  30658322 cttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacatagtaacaacttcggtagat 30658239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 32079404 - 32079321
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaa-tagactttggaaat 152  Q
    ||||||||||| | |||||||||||||| || | ||||||||||| | ||||||||||| ||||||||| |||||||| |||||    
T  32079404 ttaaagagagcaacctgatcgtgactcagcccaataataacttcggtggatgaaaattctttttcaaaagtagactttagaaat 32079321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 18344490 - 18344413
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||| ||||||| |||||||    
T  18344490 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctagtaacaacttcg 18344413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 35639031 - 35639116
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||| ||||||| |||||||||| ||||| |||||| ||||||| |||||    
T  35639031 gtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagagcgacctgatcgtgattcaacttagtaacaacttcggtagat 35639116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 12796986 - 12796907
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||| ||||||||||  |||| ||  | |||| ||||||||||||||||| ||||||||||||||| ||| |||||||    
T  12796986 gtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaacctaataacaacttcg 12796907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 25497361 - 25497444
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||| |||||  ||||| | || |||| ||||||||||||| ||| ||||||||||||||||||| || |||| |||||    
T  25497361 cttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagat 25497444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 13291614 - 13291708
Alignment:
Q  76 agagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaa 170  Q
    ||||| |||||||| || || ||||| |||| ||||||||||||| |||||   ||||||| ||||||||| |||||| |||| ||||| |||||    
T  13291614 agagcaatctgatcatggcttaacctggtaacaacttcgatagataaaaataatttttcaatatagactttagaaattcaaatacaacaatttaa 13291708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 42926830 - 42926880
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||| |||||    
T  42926830 ttaaagagagcggcctgatcgtgactcaacctagtaacaacttcggtagat 42926880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 30631608 - 30631555
Alignment:
Q  67 gttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| || || |||||||||||||||||||| ||||||| |||||    
T  30631608 gttttaaagagagtgacctaatcgtgactcaacctagtaacaacttcggtagat 30631555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 7737885 - 7737964
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    |||||||||||||||||  |||| ||  | || | |||||||||||||  || ||||||||||||||||||| |||||||    
T  7737885 gtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgtgactcaacctagtaacaacttcg 7737964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 29677793 - 29677743
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||| |||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  29677793 ttaatgagagcgacctggtcgtgactcaacctagtaacaacttcgctagat 29677743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Complemental strand, 21207149 - 21207109
Alignment:
Q  60 atgacacgttttaaagagagcgatctgatcgtgactcaacc 100  Q
    |||| |||| ||||| |||||||||||||||||||||||||    
T  21207149 atgaaacgtattaaaaagagcgatctgatcgtgactcaacc 21207109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 758404 - 758487
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||| ||||| || || |||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  758404 cttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacctagtaacaacttcggtagat 758487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 3033701 - 3033618
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  3033701 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 3033618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 3672643 - 3672560
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  3672643 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 3672560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 3692675 - 3692592
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  3692675 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 3692592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 49971460 - 49971543
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||||||||| || || |||| ||||||||| ||| ||| ||||||||||||||||||| ||||||| |||||    
T  49971460 cttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactcaacctagtaacaacttcggtagat 49971543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 3657274 - 3657359
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| | |||| || || |||| |||||||||||||||| ||||||||||||| |||||| ||||||| |||||    
T  3657274 gtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctaatcgtgactcaacatagtaacaacttcggtagat 3657359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 7571252 - 7571337
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  7571252 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 7571337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 29715698 - 29715618
Alignment:
Q  40 gcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| ||||||| || |||| ||||| ||||||||||| ||||||||||||||| ||| ||||||| |||||    
T  29715698 gcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaacctaataacaacttcggtagat 29715618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 14438731 - 14438814
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||||| ||||| || || |||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||||    
T  14438731 cttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagat 14438814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 18467282 - 18467199
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  18467282 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 18467199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 23666159 - 23666242
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  23666159 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 23666242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 24038407 - 24038490
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  24038407 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 24038490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 8069738 - 8069654
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||| ||| |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  8069738 gtcttgcacaattt-ggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 8069654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 8883229 - 8883144
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||| ||||||||| ||||||| |||||    
T  8883229 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcgacctagtaacaacttcggtagat 8883144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 8887989 - 8887904
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||| ||||  |  | |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  8887989 gtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 8887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 16013721 - 16013644
Alignment:
Q  109 acttcgatagatgaaaattcattttcaaaatagactttggaaatttaaatgcaacagtttaaaaattcaaaaccaaca 186  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||  |||| |||||||||  |||| |||||||||||    
T  16013721 acttcggtagatgaaaattctttttcgaaatagactttggaaatccaaatacaacagtttggaaatccaaaaccaaca 16013644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 55431372 - 55431296
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||||| |||||| || ||||||| || |||| ||||||||||||| ||||||||||||||||||| ||| ||||||    
T  55431372 cttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacctaataacaacttc 55431296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 3419052 - 3418969
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| |||||||||||||  || ||||||||||||||||||| ||||||| |||||    
T  3419052 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcgtgactcaacctagtaacaacttcggtagat 3418969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 39775764 - 39775847
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||  ||||||| |||||    
T  39775764 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtagcaacttcggtagat 39775847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 12971667 - 12971753
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatg 121  Q
    |||||||||||||||||  | || || || |||| |||||||||| || ||| |||||| |||||||||||| ||||||||||||||    
T  12971667 gtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacctggtcgtgagtcaacctagtaacaacttcgatagatg 12971753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 12112675 - 12112760
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||| |||||| |||| || || |||| ||||||||||||| ||  |||||| |||||||||||| ||||||| |||||    
T  12112675 gtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtgattcaacctagtaacaacttcggtagat 12112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 12965907 - 12965992
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| ||| | |||| ||||||||||||| ||| | ||||||||| ||||||| ||||||| |||||    
T  12965907 gtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactcaatctagtaacaacttcggtagat 12965992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 20507653 - 20507598
Alignment:
Q  97 aacctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaat 152  Q
    |||| ||||||||||||  ||||||||||||| |||||||||||||||||| ||||    
T  20507653 aaccaagtaataacttcagtagatgaaaattctttttcaaaatagactttgaaaat 20507598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 20520111 - 20520028
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||| ||||  |||| || || |||| |||||||||| || ||| ||||||||||||||||||| ||||||| |||||    
T  20520111 cttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcgctagat 20520028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 29350297 - 29350214
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||| |||||  || ||||||||||||||||||| ||||||| |||||    
T  29350297 cttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactcaacctagtaacaacttcggtagat 29350214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 18472031 - 18471982
Alignment:
Q  71 taaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  18472031 taaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 18471982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 26962091 - 26962049
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaat 107  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||    
T  26962091 acgtcttaaagagagcgatctggtcgtgactcaacccagtaat 26962049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 27708928 - 27708858
Alignment:
Q  44 aattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcg 114  Q
    ||||||||  |||| || || |||| ||||||||| ||| ||| ||||||||||||||||||| |||||||    
T  27708928 aattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacctagtaacaacttcg 27708858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 7451817 - 7451734
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  7451817 cttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 7451734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 36942301 - 36942384
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  36942301 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 36942384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 37652866 - 37652949
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| | ||||| || |||| ||||||||||||| ||||||||||||||||||| ||| ||||||| |||||    
T  37652866 cttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaacctaataacaacttcggtagat 37652949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 39523110 - 39523025
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||   ||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  39523110 gtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 39523025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 26667331 - 26667248
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  26667331 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 26667248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 26938928 - 26938845
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  26938928 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 26938845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 29168009 - 29168092
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  29168009 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 29168092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 36937547 - 36937630
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||||| |||| ||||||||||||| ||| ||||||||||||||| ||| ||||||| |||||    
T  36937547 cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctaataacaacttcggtagat 36937630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 6155453 - 6155538
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||| | ||||||||| |||| || || |||| ||||||||||||| ||||||||||||||||||||||| || |||| |||||    
T  6155453 gtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgactcaacctagtaacaatttcggtagat 6155538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 12045173 - 12045258
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || |||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||||    
T  12045173 gtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaacctagtaacaacttcggtagat 12045258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 39518467 - 39518386
Alignment:
Q  39 tgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||   ||| || || |||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  39518467 tgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagat 39518386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 40147956 - 40147871
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||||  |||| || || || | ||||||||||||| |||||| |||||||||||| ||| |||||||||||||    
T  40147956 gtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactcaacctaataacaacttcgatagat 40147871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Original strand, 41587194 - 41587279
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||| | ||||||| || |||| ||||||||||| | ||| ||||||||||| ||||||| ||||||| |||||    
T  41587194 gtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggtcgtgactcaaactagtaacaacttcggtagat 41587279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 42001495 - 42001410
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||| |||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  42001495 gtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 42001410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 556754 - 556671
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||  | |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  556754 cttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 556671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 561526 - 561443
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||  | |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  561526 cttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 561443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 12103084 - 12103001
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| |||| |||||||||||||| ||||||| |||||    
T  12103084 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtaactcaacctagtaacaacttcggtagat 12103001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 37248831 - 37248914
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||||||||||| | ||||| || || | || ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  37248831 cttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 37248914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 41996726 - 41996641
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    ||||| |||||||||||  |||| || || |||| ||||||||||| | ||| ||||||||||||||||||| ||||||| |||||    
T  41996726 gtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgtgactcaacctagtaacaacttcggtagat 41996641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 113
Target Start/End: Original strand, 12501936 - 12502011
Alignment:
Q  38 ttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    ||||||||||||||  |||| || || |||| ||||||||||||| ||| || |||||||||||||||| ||||||    
T  12501936 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgactcaacctagtaacaacttc 12502011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 36423696 - 36423613
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| |  || |||| ||||||||||||| ||| ||| ||||||||||||||| ||||||| |||||    
T  36423696 cttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgactcaacctagtaacaacttcggtagat 36423613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 120
Target Start/End: Complemental strand, 36428740 - 36428685
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  36428740 acgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgttagat 36428685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 3665991 - 3665909
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    |||||||||||||||  |||| || || |||| || |||||||||| ||  ||||||||||||||||||| ||||||| ||||    
T  3665991 cttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactcaacctagtaacaacttcggtaga 3665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 16116283 - 16116365
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgata 117  Q
    |||||||||||||||||  ||||||| || ||||||||| |||||| | ||  |||||||| ||||||| || ||||||||||    
T  16116283 gtcttgcacaattttgggcagtgtcacgaaacgttttaaggagagcaacctagtcgtgacttaacctagcaacaacttcgata 16116365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 121
Target Start/End: Original strand, 12102867 - 12102951
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatg 121  Q
    |||||||||||||||  |||| ||  | | || ||||||||||||| ||  ||||||||||||||||||| ||||||| ||||||    
T  12102867 cttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactcaacctagtaacaacttcggtagatg 12102951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 10759856 - 10759938
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| ||  | |||| ||||| ||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  10759856 cttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgactcaacctagtaacaacttcggtagat 10759938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 15148586 - 15148532
Alignment:
Q  88 tcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaataga 142  Q
    ||||| ||||||| | ||||||||| | || ||||||||||||||||||||||||    
T  15148586 tcgtgtctcaacccaataataactttggtaaatgaaaattcattttcaaaataga 15148532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 146
Target Start/End: Complemental strand, 22975071 - 22974980
Alignment:
Q  54 agtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaatagacttt 146  Q
    |||||||| | |||| ||||| | |||||||||||||| |||||||||| ||| || |||  ||||| ||||||| ||||  |||||||||||    
T  22975071 agtgtcataaaacgtcttaaaaatagcgatctgatcgtaactcaacctactaacaatttcagtagataaaaattc-ttttttaaatagacttt 22974980  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 32461583 - 32461647
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaac 99  Q
    |||||||||||||||||  |||| ||  | |||| ||||||||||||| ||| ||||||||||||    
T  32461583 gtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 32461647  T

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Target: scaffold0352 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 7163 - 7080
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  7163 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 7080  T

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Target: scaffold0182 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 9923 - 10006
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  9923 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 10006  T

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Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Complemental strand, 83125 - 83043
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgataga 119  Q
    |||||| |||||||| | |||||| || |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| ||||    
T  83125 cttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtaga 83043  T

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Target: scaffold0184 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 65 - 140
Target Start/End: Complemental strand, 2340 - 2265
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttcaaaata 140  Q
    |||| ||||||||| ||| |||||| |||||||||||| ||| |||||||||| |||||||||| ||| |||||||    
T  2340 acgtattaaagagaacgacctgatcatgactcaacctaataacaacttcgataaatgaaaattcttttacaaaata 2265  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 4133 - 4050
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||  |||| || || | || ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||    
T  4133 cttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagat 4050  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 155559 - 155652
Alignment:
Q  65 acgttttaaagagagcgatctgatcgtgactca-acctagtaataacttcgatagatgaaaattcattttcaaaatagactttggaaatttaaat 158  Q
    |||| ||||||||| ||| ||| |||||| | | ||||| ||||||||||||||||||||||||  ||||||||||||| |||||||||| ||||    
T  155559 acgtcttaaagagaacgacctggtcgtgattgacacctattaataacttcgatagatgaaaattatttttcaaaataga-tttggaaattcaaat 155652  T

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Target: scaffold0240 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 4017 - 3904
Alignment:
Q  70 ttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagatgaaaattcattttc-aaaatagactttggaaatttaaatgcaacagttt 168  Q
    |||||||||||||| || ||||||||||||||||||| ||||||| |||||    |||| ||||| |||||||| |||| ||||| |||| | ||| |||    
T  4017 ttaaagagagcgatatggtcgtgactcaacctagtaacaacttcggtagat----attctttttcaaaaatagaatttgaaaattcaaatacgacaattt 3922  T
Q  169 aaaaattcaaaaccaaca 186  Q
     ||||| ||||| |||||    
T  3921 taaaatccaaaaacaaca 3904  T

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Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 25460 - 25375
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttcgatagat 120  Q
    |||||||||||||||    ||||||| |  |||| |||||||||| || || || ||||||||||||||||| |||||||||||||    
T  25460 gtcttgcacaattttacgcagtgtcacgtaacgtcttaaagagagtgacctaattgtgactcaacctagtaacaacttcgatagat 25375  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Original strand, 166120 - 166190
Alignment:
Q  35 gtcttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagta 105  Q
    ||||||||||||||| |  |||| || || |||| ||||||||||||| ||| | ||||||||||||||||    
T  166120 gtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaacctagta 166190  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 35693 - 35617
Alignment:
Q  37 cttgcacaattttggatagtgtcatgacacgttttaaagagagcgatctgatcgtgactcaacctagtaataacttc 113  Q
    |||||||||||||||  ||||||| || |||| ||||||||||||   || |||| ||| |||||||||| ||||||    
T  35693 cttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggcatggtcgtaacttaacctagtaacaacttc 35617  T

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