View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11849_low_31 (Length: 229)
Name: NF11849_low_31
Description: NF11849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11849_low_31 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 52296388 - 52296597
Alignment:
| Q |
1 |
ttgggaaatacatagtgcaacaatatgtggcagcaaccggtggacaaggtgcattgaattcattgcaaaacatgtatgcaatgggagaagttagaataca |
100 |
Q |
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| T |
52296388 |
ttgggaaatacatagtgcaacaatatgtggcagcaaccggtggacaaggtgcattgaattcattgcaaaacatgtatgcaatgggagaagttagaataca |
52296487 |
T |
|
| Q |
101 |
tggttcagagatgcgtcatggtgccgatgataacagcgttcattcaagaggcaaagctgaagtaggaggtttcgtgctatggcaaaacaatccagattta |
200 |
Q |
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| T |
52296488 |
tggttcagagatgcgtcatggtgccgatgataacagcgttcattcaagaggcaaagctgaagtaggaggtttcgtgctatggcaaaacaatccagattta |
52296587 |
T |
|
| Q |
201 |
tggtgcttgg |
210 |
Q |
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|||||||||| |
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| T |
52296588 |
tggtgcttgg |
52296597 |
T |
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