View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11850_high_21 (Length: 253)
Name: NF11850_high_21
Description: NF11850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11850_high_21 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 3 - 243
Target Start/End: Complemental strand, 38930824 - 38930584
Alignment:
| Q |
3 |
gaaggacggccggaaaatgttcataccaatttcgtaatgtgaatatacatcaattgagttaaactccatatggaaatatataaaataatgtacttttaga |
102 |
Q |
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| T |
38930824 |
gaaggacggctggaaaatgttcataccaatttcgtaatgtgaatatacattaattgagttaaactccatatggaaatatataaaataatgtacttttaga |
38930725 |
T |
|
| Q |
103 |
gtctcataacaatgatctataaatgtttgatagaattaaaataccatagattgtgtcataagattgtgcaacttgttggctatatacgattcatgcttgc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38930724 |
gtctcataacaatgatctataaatgtttgatagaattaaaataccatagattgtgtcataagattgtgcaacttgttggctatatacgattcatgcttgc |
38930625 |
T |
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| Q |
203 |
atgaaattattcttgaagtaaatatgactatattcatctca |
243 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| |
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| T |
38930624 |
atgaaattattcttgaagtaaataagactatattcatctca |
38930584 |
T |
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