View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11851_high_37 (Length: 378)
Name: NF11851_high_37
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11851_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 364
Target Start/End: Complemental strand, 32282332 - 32281987
Alignment:
| Q |
19 |
gttccaacggaaccaaacaccgaaaccccacaaatcctaagctcaatcctctcccaaagcagcctctgttactctgaagacacaaaatatctcatccgtg |
118 |
Q |
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| T |
32282332 |
gttccaacggaaccaaacaccaaaaccccgcaaatcctaagctcaatcctctcccaaagcagcctttgttactccgaagacacaaaatttctcatccgtg |
32282233 |
T |
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| Q |
119 |
accacctcctctctctcctcacaaactatccatcactcgaacctggaaccaacaccatgatttacaaaattagtcgccgcgccttcaacatagtccaagc |
218 |
Q |
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|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
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| T |
32282232 |
accacctcctctctctcctcacaaactatccaacactcaaacctggaaccaacaccatgatttacaaaattagtctcggcgccttcaacatagtccaagc |
32282133 |
T |
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| Q |
219 |
cgacggcactattcccatgacctacaaagctgtaacttaccatactccaatagttatttctctactggaatcttaccctcgtcaccctcctctagtctat |
318 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32282132 |
cgacagcactattcccatgacctacaaagctgtaacttaccatactccaatagttatttctctactggaatcttaccctcgtcaccctcctctagtctat |
32282033 |
T |
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| Q |
319 |
cttaaccctccaccatatttaaaaatcaaactccatcatccctatg |
364 |
Q |
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|||||||||||||||||||| |||||||||||||||||||| |||| |
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| T |
32282032 |
cttaaccctccaccatatttgaaaatcaaactccatcatccttatg |
32281987 |
T |
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