View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11851_low_19 (Length: 479)
Name: NF11851_low_19
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11851_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 11 - 399
Target Start/End: Original strand, 36290944 - 36291333
Alignment:
| Q |
11 |
cagagatgggtagagcttgctcaacatggactaatgaaagtgatgaatcatcacgttggttagcactaacagatgattttgtagtggttctctttgaagt |
110 |
Q |
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| T |
36290944 |
cagaaatgggtagagcttgctcaacatggactaatgaaagtgatgattcatcacgttggttagcactaacagaagattttgtagtggttctctttgaagt |
36291043 |
T |
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| Q |
111 |
cacaaccattttgaggacacagcacaagttatgacaatgatagaagaaagtgaatacaaaaagccttttgtgaggtttataagatgaatgaatgaataga |
210 |
Q |
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| T |
36291044 |
cacaaccattttgaggacacagcacaagttatgacaatgatagaagaaagtgaatacaaaaagccttttgtgaggtttataagatgaatgaatgaataga |
36291143 |
T |
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| Q |
211 |
ggtttagctgaaatgcatatttatagagtgcctaattaaggggaaaatgaaatgaagggaaagagggtcgattggtatcttgtagctaatggagtttagt |
310 |
Q |
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| T |
36291144 |
ggtttagctgaaatgcatatttatagagtgcctaattaaggggaaaatgaaatgaagggaaagagggtcgattggtatcttgtagttaatggagtttagt |
36291243 |
T |
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| Q |
311 |
tgaggtttacaggggaattggagttacaatttggcagttacttactagaagggtcttcaatgtttgag-aattgaaaggttcctcgctaa |
399 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36291244 |
tgaggtttacaggggaattggagttacaatttggcagttacttactaggagggtcttcaatgtttgagcaattgaaaggttcctcgctaa |
36291333 |
T |
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