View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11851_low_35 (Length: 408)

Name: NF11851_low_35
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11851_low_35
NF11851_low_35
[»] chr4 (25 HSPs)
chr4 (151-364)||(54703525-54703742)
chr4 (151-363)||(43502267-43502483)
chr4 (151-365)||(36046888-36047092)
chr4 (151-364)||(52789283-52789500)
chr4 (151-326)||(54808986-54809165)
chr4 (152-364)||(34939342-34939558)
chr4 (151-321)||(42118906-42119079)
chr4 (151-364)||(33985431-33985649)
chr4 (151-321)||(37694494-37694667)
chr4 (151-235)||(51242828-51242915)
chr4 (159-364)||(52032692-52032882)
chr4 (167-253)||(47020065-47020154)
chr4 (159-214)||(45042999-45043054)
chr4 (151-214)||(779438-779501)
chr4 (331-364)||(21713331-21713364)
chr4 (331-364)||(31825895-31825928)
chr4 (327-367)||(51243872-51243912)
chr4 (329-364)||(38133031-38133066)
chr4 (323-364)||(12656348-12656389)
chr4 (323-364)||(49063140-49063181)
chr4 (328-365)||(50333979-50334016)
chr4 (328-364)||(18487172-18487208)
chr4 (332-364)||(21710700-21710732)
chr4 (215-271)||(27761180-27761235)
chr4 (285-364)||(47020004-47020084)
[»] chr7 (11 HSPs)
chr7 (151-364)||(4035134-4035351)
chr7 (151-364)||(37449890-37450107)
chr7 (151-364)||(39283877-39284094)
chr7 (151-269)||(14678288-14678409)
chr7 (151-235)||(3742352-3742439)
chr7 (151-331)||(40144765-40144943)
chr7 (323-364)||(39476416-39476457)
chr7 (169-256)||(8260876-8260966)
chr7 (331-364)||(23943806-23943839)
chr7 (61-102)||(4035044-4035085)
chr7 (62-102)||(37450155-37450195)
[»] chr1 (17 HSPs)
chr1 (151-364)||(33686526-33686743)
chr1 (151-366)||(12926713-12926932)
chr1 (151-364)||(43138631-43138848)
chr1 (151-364)||(10308361-10308577)
chr1 (151-309)||(7014756-7014917)
chr1 (154-269)||(22605422-22605540)
chr1 (154-304)||(41871681-41871833)
chr1 (323-364)||(18169182-18169223)
chr1 (151-254)||(15399068-15399174)
chr1 (159-250)||(49150547-49150641)
chr1 (331-369)||(48569441-48569479)
chr1 (331-364)||(46923665-46923698)
chr1 (285-366)||(15399006-15399088)
chr1 (334-364)||(23943687-23943717)
chr1 (331-365)||(39222589-39222623)
chr1 (331-364)||(30308266-30308299)
chr1 (215-279)||(3660227-3660290)
[»] chr2 (17 HSPs)
chr2 (151-364)||(41192365-41192582)
chr2 (151-363)||(6728507-6728723)
chr2 (151-364)||(5814517-5814735)
chr2 (151-363)||(1887807-1888023)
chr2 (151-364)||(34619883-34620081)
chr2 (151-364)||(21083656-21083872)
chr2 (151-363)||(4616620-4616836)
chr2 (151-253)||(32737854-32737959)
chr2 (151-266)||(5290683-5290800)
chr2 (167-269)||(26257773-26257879)
chr2 (151-269)||(37057183-37057304)
chr2 (154-304)||(29908451-29908603)
chr2 (326-365)||(32733933-32733972)
chr2 (331-365)||(42242118-42242152)
chr2 (61-102)||(34619793-34619834)
chr2 (331-364)||(43837507-43837540)
chr2 (61-97)||(41192275-41192311)
[»] chr6 (5 HSPs)
chr6 (151-364)||(11598907-11599124)
chr6 (159-364)||(30634105-30634314)
chr6 (152-269)||(3515201-3515321)
chr6 (331-364)||(5741178-5741211)
chr6 (61-102)||(11599167-11599208)
[»] chr5 (14 HSPs)
chr5 (151-364)||(1081870-1082086)
chr5 (151-356)||(2786628-2786837)
chr5 (151-344)||(34953956-34954153)
chr5 (151-364)||(18172117-18172334)
chr5 (151-309)||(12143990-12144151)
chr5 (151-253)||(7662186-7662291)
chr5 (151-322)||(40033983-40034158)
chr5 (152-269)||(43147409-43147529)
chr5 (285-364)||(7662272-7662352)
chr5 (323-365)||(2743925-2743967)
chr5 (331-365)||(8688103-8688137)
chr5 (331-365)||(20887940-20887974)
chr5 (323-365)||(34954968-34955010)
chr5 (217-298)||(1172988-1173068)
[»] chr3 (14 HSPs)
chr3 (151-364)||(49501514-49501731)
chr3 (151-267)||(41649932-41650051)
chr3 (151-361)||(49742081-49742295)
chr3 (151-253)||(49303208-49303313)
chr3 (151-304)||(23029596-23029752)
chr3 (151-250)||(2447597-2447699)
chr3 (237-365)||(53401545-53401672)
chr3 (154-279)||(48086816-48086943)
chr3 (285-364)||(2447533-2447613)
chr3 (325-363)||(2451961-2451999)
chr3 (327-365)||(32211061-32211099)
chr3 (331-364)||(37280603-37280636)
chr3 (331-364)||(39417960-39417993)
chr3 (328-365)||(41650997-41651034)
[»] chr8 (17 HSPs)
chr8 (151-364)||(35161495-35161710)
chr8 (151-361)||(4322587-4322801)
chr8 (215-364)||(15743238-15743388)
chr8 (167-365)||(4759206-4759408)
chr8 (151-364)||(1217679-1217896)
chr8 (151-269)||(5913098-5913219)
chr8 (151-269)||(9039649-9039770)
chr8 (169-365)||(42182547-42182747)
chr8 (151-214)||(15739689-15739752)
chr8 (151-208)||(2766845-2766902)
chr8 (323-365)||(5076331-5076373)
chr8 (331-365)||(9512532-9512566)
chr8 (168-214)||(23810856-23810901)
chr8 (61-102)||(4322850-4322891)
chr8 (331-364)||(43693731-43693764)
chr8 (215-259)||(23542793-23542836)
chr8 (331-363)||(37226988-37227020)
[»] scaffold0051 (1 HSPs)
scaffold0051 (151-269)||(20077-20198)
[»] scaffold0007 (1 HSPs)
scaffold0007 (333-367)||(256388-256422)
[»] scaffold0753 (1 HSPs)
scaffold0753 (169-256)||(3995-4085)


Alignment Details
Target: chr4 (Bit Score: 136; Significance: 8e-71; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 54703742 - 54703525
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||| ||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||   |||| ||||||| |||||||||| || ||||||    
T  54703742 cattaactaccgtccaagaaacgtttgttcttcagtttttaccaccgaccaacttgcgcaagttaactcgcacataggcccagtggtgcgcgacttaagt 54703643  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttga-aaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| ||||||||||| ||||||||| || ||||||||||||||||    
T  54703642 cacgcagagcttgtgaggtgcgtatgttaagtctcgctgcgttacttaactcacgcagggttatatttgaaaaaagtgcagggcgcgagcaaaatgtgca 54703543  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||||||||||||||    
T  54703542 gggtgaagagcagaattc 54703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 151 - 363
Target Start/End: Original strand, 43502267 - 43502483
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| || ||||||    
T  43502267 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcgcgacttaagt 43502366  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||| |||    |||| || || ||||||||||||     
T  43502367 cacgcagagcttgtgaggtgcgcatgttaaatctcgctgcgttacttaactcgcgcagagttatatttagaacggttgcagggcgcaagcaaaatgtgct 43502466  T
Q  347 gggtgaagagcagaatt 363  Q
    ||||| |||||||||||    
T  43502467 gggtgtagagcagaatt 43502483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 151 - 365
Target Start/End: Original strand, 36046888 - 36047092
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtttcgcgcataggctcagtggtgcgagatttaagtcac 250  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||           ||||||||||||||||| || |||||||||    
T  36046888 cattgactactgtccaagaaacgtttgtgtttcagtttttaccaccgaccaacttgcgc-----------ataggctcagtggtgcgcgacttaagtcac 36046976  T
Q  251 gcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttg-aaaaagtgcaaggtgcgagcaaaatgtgcaggg 349  Q
    ||| |||||||||||||  |||||||||| | ||||||||||||||||| ||||| |||||||| | |||||||||| || || ||||||||||||||||    
T  36046977 gcaaagcttgtgaggtgtacatgttaagtctcgctgcgttacttaactcacgcagggttatattcgaaaaaagtgcagggcgcaagcaaaatgtgcaggg 36047076  T
Q  350 tgaagagcagaattca 365  Q
    ||||||||||||||||    
T  36047077 tgaagagcagaattca 36047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 52789500 - 52789283
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||| || ||||||    
T  52789500 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagt 52789401  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||| ||||||||||||  ||||||||   ||| | | ||||||||| ||||   | |||||| ||||| ||||| || |||||| |||||| |     
T  52789400 cacgcagagtttgtgaggtgcgtgtgttaagtgacgctacttgacttaactcacgcaagatcatatttaaaaaatgtgcagggcgcgagcgaaatgttct 52789301  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||| ||||||||||    
T  52789300 gggtgaaaagcagaattc 52789283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 326
Target Start/End: Original strand, 54808986 - 54809165
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| | || ||||||    
T  54808986 cattgactaccgtccaagaaatgtttgtggttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgtgcgacttaagt 54809085  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgca 326  Q
    ||| || || || |||||||| |||||||| | | ||||||||||||||||| || || ||||||||| |||||||||||    
T  54809086 cacacatagattatgaggtgcacatgttaaatatcgctgcgttacttaactcacgtagggttatatttggaaaaagtgca 54809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 152 - 364
Target Start/End: Original strand, 34939342 - 34939558
Alignment:
Q  152 attgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtc 248  Q
    |||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||   |||||||||||||||||| |||| ||  ||||||    
T  34939342 attgaccaccgttcaagaaacgtttgtgctgcagtttttaccaccggccaacttgcggaagttaactcgcgcataggctcagtgttgcgtgacataagtc 34939441  T
Q  249 acgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaa-agtgcaaggtgcgagcaaaatgtgcag 347  Q
    | |||||||||||||||||||  ||||||||   ||| ||| ||||||||| ||||| || |||||||||||   |||| || |||||| |||||||| |    
T  34939442 atgcagagcttgtgaggtgcgtgtgttaagtcacgctacgtgacttaactcacgcagggtcatatttgaaaatcatgcagggcgcgagcgaaatgtgctg 34939541  T
Q  348 ggtgaagagcagaattc 364  Q
     |||||||||| |||||    
T  34939542 agtgaagagcaaaattc 34939558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 151 - 321
Target Start/End: Complemental strand, 42119079 - 42118906
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||   ||||| | ||||||||||||||| || ||||||    
T  42119079 cattgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtagaggctcagtggtgcgtgacttaagt 42118980  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa 321  Q
    |||||||| ||||||||||| |   |||||||   || |||| ||||||||| ||||| |||||||||||||||    
T  42118979 cacgcagaacttgtgaggtgtgtgagttaagtcacgcagcgtgacttaactcacgcagggttatatttgaaaaa 42118906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 33985431 - 33985649
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||  ||| |||| || ||||||    
T  33985431 cattgaccaccgtccaagaaacgtttgtgcttcagtttttactaccggccaacttgcgcaagttaactcgcgcagaggctttgtgttgcgtgacttaagt 33985530  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaagg-tgcgagcaaaatgtgc 345  Q
    ||||||||| ||||||||||||   |||||     | ||||| ||||||||| | ||  | ||||||||||||| ||||| || ||||||||||||||||    
T  33985531 cacgcagagtttgtgaggtgcgtgagttaaaccacgttgcgtgacttaactcacacaaaggtatatttgaaaaatgtgcagggatgcgagcaaaatgtgc 33985630  T
Q  346 agggtgaagagcagaattc 364  Q
     || |||||||||||||||    
T  33985631 tggatgaagagcagaattc 33985649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 321
Target Start/End: Original strand, 37694494 - 37694667
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| | ||||| | |||| | ||||||||||||||||||||||||||||||||||| |||   ||||| | ||||||||||||||| || ||||||    
T  37694494 cattgaccatcgtcccaaaaacgtctgtgcttcagtttttaccaccggccaacttgcgcaggttaactcgcgtagaggctcagtggtgcgtgacttaagt 37694593  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa 321  Q
    || |||||||||||||||||||   |||||||   ||||||| ||||||||| ||||| | |||||||| ||||    
T  37694594 catgcagagcttgtgaggtgcgtgagttaagtcacgctgcgtgacttaactcacgcaggggtatatttggaaaa 37694667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 51242915 - 51242828
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtg 235  Q
    ||||||||||||||||| |||| ||| |||||||||||| ||||||||||||||||||||||||   |||||||||||||||||||||    
T  51242915 cattgactaccgtccaaaaaacgtttatgcttcagttttgaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtg 51242828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 159 - 364
Target Start/End: Original strand, 52032692 - 52032882
Alignment:
Q  159 accgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgcaga 255  Q
    ||||||| | |||| ||||||||| ||||||||||||||||||| |||||||||||   |||||||||||||||||||||                   |    
T  52032692 accgtcccaaaaacgtttgtgctttagtttttaccaccggccaatttgcgcaagttaactcgcgcataggctcagtggtg-------------------a 52032772  T
Q  256 gcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaa-agtgcaaggtgcgagcaaaatgtgcagggtgaag 354  Q
    |||| |||||||||   ||||||| | ||||||| ||||||||| ||||| || | ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  52032773 gcttatgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagggtcaaatttgaaaaaagtgcaaggcgcgagtaaaatgtgcagggtgaag 52032872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 47020154 - 47020065
Alignment:
Q  167 agaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgca 253  Q
    |||||| ||| |||||||||||||||||||| ||||||||||||||||   ||||||| ||||||||||||||| || |||| |||||||    
T  47020154 agaaacgtttttgcttcagtttttaccaccgtccaacttgcgcaagttaactcgcgcagaggctcagtggtgcgtgacttaactcacgca 47020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 45042999 - 45043054
Alignment:
Q  159 accgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt 214  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||| ||||||||    
T  45042999 accgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttacgcaagtt 45043054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 779438 - 779501
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt 214  Q
    ||||||| ||||||| | |||| ||  ||||||| |||||||||||||||||||||||||||||    
T  779438 cattgaccaccgtcccaaaaacgttaatgcttcaatttttaccaccggccaacttgcgcaagtt 779501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 21713331 - 21713364
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||||||||||||||||||||||    
T  21713331 gcgagcaaaatgtgcagggtgaagagcagaattc 21713364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 31825895 - 31825928
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||||||||||||||||||||||    
T  31825895 gcgagcaaaatgtgcagggtgaagagcagaattc 31825928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 367
Target Start/End: Original strand, 51243872 - 51243912
Alignment:
Q  327 aggtgcgagcaaaatgtgcagggtgaagagcagaattcatt 367  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  51243872 aggtgcgagcaaaacgtgctgggtgaagagcagaattcatt 51243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 364
Target Start/End: Original strand, 38133031 - 38133066
Alignment:
Q  329 gtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38133031 gtgcgagcaaaatgtacagggtgaagagcagaattc 38133066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 12656389 - 12656348
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||| |||||||||||||||||||||||| ||||||| ||||    
T  12656389 tgcagggtgcgagcaaaatgtgcagggtggagagcaggattc 12656348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 49063181 - 49063140
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||| ||||||||||||||||||||| |||||||||| ||||    
T  49063181 tgcagggtgcgagcaaaatgtgcaggttgaagagcagtattc 49063140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 50334016 - 50333979
Alignment:
Q  328 ggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  50334016 ggtgcgagcaaaatgtgccgggtggagagcagaattca 50333979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 18487172 - 18487208
Alignment:
Q  328 ggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||| |||||||||||||||||| |||||||||||||    
T  18487172 ggtgtgagcaaaatgtgcagggtaaagagcagaattc 18487208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 364
Target Start/End: Complemental strand, 21710732 - 21710700
Alignment:
Q  332 cgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||||||||||||||||||||||||||| ||||    
T  21710732 cgagcaaaatgtgcagggtgaagagcagtattc 21710700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 27761180 - 27761235
Alignment:
Q  215 tcgcgcataggctcagtggtgcgagatttaagtcacgcagagcttgtgaggtgcgca 271  Q
    ||||||||||||| ||||||||| || ||||||||||||||| || | |||||||||    
T  27761180 tcgcgcataggct-agtggtgcgtgacttaagtcacgcagagattataaggtgcgca 27761235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 47020084 - 47020004
Alignment:
Q  285 tgcgttacttaactcgcgcagtgttatatttgaaaaag-tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||| ||||||||| ||||  |||||||||| ||||  |||| || |||||| |||||||| |||||||||||| |||||    
T  47020084 tgcgtgacttaactcacgcaaggttatatttggaaaacatgcagggcgcgagcgaaatgtgctgggtgaagagcaaaattc 47020004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 5e-66; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 4035134 - 4035351
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| || ||||||    
T  4035134 cattgactaccgtctaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagt 4035233  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttg-aaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||| | |||||||||||    ||||||| | ||||||| ||||||||| ||||| |||||||||| |||||||| | || ||||||||||||||||    
T  4035234 cacgcagggattgtgaggtgcatgagttaagtctcgctgcgtgacttaactcacgcagggttatatttgaaaaaagtgtagggcgcgagcaaaatgtgca 4035333  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||||||||||||||    
T  4035334 gggtgaagagcagaattc 4035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 37450107 - 37449890
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||   ||| |||||||||||||| |||| || ||||||    
T  37450107 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggtcaacttgcgcaagttaactcgtgcataggctcagtgatgcgcgacttaagt 37450008  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||| || || | |||||||||| |||||| |||| |||||||||||||||| ||| ||||||||| |||| |||||| |  ||||| |||||||||     
T  37450007 cacgcaaagattataaggtgcgcatattaagtattgcggcgttacttaactcgcacagagttatatttggaaacagtgcaggacgcgagtaaaatgtgct 37449908  T
Q  347 gggtgaagagcagaattc 364  Q
    || |||||||||||||||    
T  37449907 ggatgaagagcagaattc 37449890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 39284094 - 39283877
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||||| ||||||||||||| ||   ||||| | ||||||||||||||| || ||||||    
T  39284094 cattgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaaattaactcgcgtagaggctcagtggtgcgtgacttaagt 39283995  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttata-tttgaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||||||||| |||||||||   ||||||    ||||||| ||||||||| ||||  |||||| ||||||||  |||| || || ||| ||||||||     
T  39283994 cacgcagagcttatgaggtgcgtgagttaagccacgctgcgtgacttaactcacgcatggttatattttgaaaacatgcagggcgcaagcgaaatgtgct 39283895  T
Q  347 gggtgaagagcagaattc 364  Q
    |||||||||||| |||||    
T  39283894 gggtgaagagcaaaattc 39283877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 14678409 - 14678288
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||   || | || ||||||||||||||| || ||||||    
T  14678409 cattgaccaccgtccaagaaacgtttgtgctgcagtttttaccaccggccaacttgcgcaagttaactcacacagaggctcagtggtgcgtgacttaagt 14678310  T
Q  248 cacgcagagcttgtgaggtgcg 269  Q
    |||| |||| ||||||||||||    
T  14678309 cacgtagaggttgtgaggtgcg 14678288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 3742352 - 3742439
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtg 235  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||    
T  3742352 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcacgcataggctcagtggtg 3742439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 151 - 331
Target Start/End: Original strand, 40144765 - 40144943
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||| |||   |||| ||||| |||||||||||| || ||||||    
T  40144765 cattgactacggttcaaggaacgtttgtgcttcagtttttaccaccggccaacttgcgcaggttaagtcgcacatagactcagtggtgcgtgacttaagt 40144864  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttg--aaaaagtgcaaggtg 331  Q
    ||||| ||||       |||| |||||||||||| | ||||||| ||||||| || || ||||||||||  |||||||||| ||||    
T  40144865 cacgctgagc-------gtgctcatgttaagtttcgttgcgttatttaactcacgtagggttatatttggaaaaaagtgcagggtg 40144943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 39476457 - 39476416
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  39476457 tgcaaggcgcgagcaaaatgtgcagggtgaagagcagaattc 39476416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 8260966 - 8260876
Alignment:
Q  169 aaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgcagag 256  Q
    |||| ||||| | |||||| | ||||||||||||||||||  ||||   ||||||| ||||||||||||||| || |||||||||||||||    
T  8260966 aaacgtttgttcatcagttctgaccaccggccaacttgcgtgagttaactcgcgcaaaggctcagtggtgcgtgacttaagtcacgcagag 8260876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 23943806 - 23943839
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||||||||||||||||||||||    
T  23943806 gcgagcaaaatgtgcagggtgaagagcagaattc 23943839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 4035044 - 4035085
Alignment:
Q  61 tttttataggtggtatattgtatatggcacttaatgaagtcc 102  Q
    |||||||||||||||| | |||||||||||||||||| ||||    
T  4035044 tttttataggtggtatgtggtatatggcacttaatgaggtcc 4035085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 62 - 102
Target Start/End: Complemental strand, 37450195 - 37450155
Alignment:
Q  62 ttttataggtggtatattgtatatggcacttaatgaagtcc 102  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  37450195 ttttataggtggtataaggtatatggcacttaatgaggtcc 37450155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 5e-66; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 33686526 - 33686743
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||| || ||||||    
T  33686526 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttacgcaagttaactcgcgcataggctcagtggtgcgtgacttaagt 33686625  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||| |||||||||||||||   ||||||| | ||||||| ||||||||| |||||  |||||||| ||||||||||| |  ||||||||||||||||    
T  33686626 cacgcaaagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagaattatatttggaaaaagtgcaggacgcgagcaaaatgtgca 33686725  T
Q  347 gggtgaagagcagaattc 364  Q
    || |||||||||||||||    
T  33686726 ggatgaagagcagaattc 33686743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 151 - 366
Target Start/End: Complemental strand, 12926932 - 12926713
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||   |||||||||||||||||   ||||||||||||||||||||||  || ||||||    
T  12926932 cattaactactgtccaagaaacgtttgtgcttcagtttttaccattagccaacttgcgcaagttaactcgcgcataggctcagtggtgcatgacttaagt 12926833  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    | |||||||||||||||||||    ||||||| | ||||||| ||||||||| ||||| ||||||||| ||||||||||| || | ||||||||||||||    
T  12926832 cgcgcagagcttgtgaggtgcatgagttaagtctcgctgcgtgacttaactcacgcagggttatatttggaaaaagtgcagggcgggagcaaaatgtgca 12926733  T
Q  347 gggtgaagagcagaattcat 366  Q
    |||||||||||| |||||||    
T  12926732 gggtgaagagcaaaattcat 12926713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 43138631 - 43138848
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||   ||||||||||||||||||||||| || |||| |    
T  43138631 cattgactaccgtccaagaaacgtttgtgcttcagtttttatcaccggccaatttgcgcaagttaactcgcgcataggctcagtggtgcgcgacttaaat 43138730  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||| ||||| |||||| |  || | ||||||||||| ||||   |||||||| ||||||||||| ||  |||| |||||||||     
T  43138731 cacgcagagcttgtgaggtacgcatattaagtctcactacattacttaactcacgcatgattatatttagaaaaagtgcagggcacgagtaaaatgtgct 43138830  T
Q  347 gggtgaagagcagaattc 364  Q
     |||||||||||||||||    
T  43138831 aggtgaagagcagaattc 43138848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 10308577 - 10308361
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||   |||||  ||||||||||||| |||||||||||||||||||||||||||   || |||| | || |||||||||| || ||||||    
T  10308577 cattgactaccgttagagaaatgtttgtgcttcagtgtttaccaccggccaacttgcgcaagttaactcacgcacatgc-cagtggtgcgtgacttaagt 10308479  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||| || |||||||||||||||   ||||||| | ||||||| ||||||||| ||||| ||||||||| ||||| ||||| || ||||||||||||||||    
T  10308478 cacacaaagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagggttatatttagaaaatgtgcagggcgcgagcaaaatgtgca 10308379  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||||||||||||||    
T  10308378 gggtgaagagcagaattc 10308361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 7014756 - 7014917
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||| ||| ||||||||| || ||||||    
T  7014756 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcatatgcttagtggtgcgtgacttaagt 7014855  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgtt 309  Q
    |||| |||||||||||||||||   ||||||| | |||| || ||||||||| |||| ||||    
T  7014856 cacgtagagcttgtgaggtgcgtgagttaagtctcgctgtgtgacttaactcacgcaatgtt 7014917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 269
Target Start/End: Complemental strand, 22605540 - 22605422
Alignment:
Q  154 tgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcac 250  Q
    |||| ||||||||| |||| | | | |||||||||||||||||||| ||||||||||||||   ||| | | ||||||| ||||||| || |||||||||    
T  22605540 tgaccaccgtccaaaaaacgtatattcttcagtttttaccaccggctaacttgcgcaagttaactcgtgtagaggctcaatggtgcgtgacttaagtcac 22605441  T
Q  251 gcagagcttgtgaggtgcg 269  Q
    | |||||||||||||||||    
T  22605440 gtagagcttgtgaggtgcg 22605422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 304
Target Start/End: Complemental strand, 41871833 - 41871681
Alignment:
Q  154 tgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcac 250  Q
    |||| ||||||||| |||| ||||| |||||||| ||||||||||||||| ||||  ||||   |||||||||||| ||||||||||  | |||||||||    
T  41871833 tgaccaccgtccaaaaaacgtttgttcttcagttcttaccaccggccaacgtgcgtgagttaactcgcgcataggc-cagtggtgcgttacttaagtcac 41871735  T
Q  251 gcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgca 304  Q
     ||||| || | ||||||||| |||||||  ||| |||| |||||||| |||||    
T  41871734 acagaggttataaggtgcgcaagttaagtcatgcagcgtgacttaacttgcgca 41871681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 18169223 - 18169182
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  18169223 tgcagggtgcgagcaaaatgtgcagggtgaagagcagaattc 18169182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 151 - 254
Target Start/End: Complemental strand, 15399174 - 15399068
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| ||||||| | |||| ||||||||||| |||||||||||  |||||||||| |||||   ||||||| || ||| |||||||| || |||| |    
T  15399174 cattgacaaccgtcccataaacgtttgtgcttcaatttttaccaccatccaacttgcgtaagttaactcgcgcagagactcggtggtgcgtgacttaact 15399075  T
Q  248 cacgcag 254  Q
    |||||||    
T  15399074 cacgcag 15399068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 49150641 - 49150547
Alignment:
Q  159 accgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagt---ttcgcgcataggctcagtggtgcgagatttaagtcac 250  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||||| ||||||||||     |||||| ||||||||||||||| || |||| ||||    
T  49150641 accgtcccagaaacgtttatgcttaagtttttaccaccggccaatttgcgcaagtcaacgcgcgcagaggctcagtggtgcgtgacttaactcac 49150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 369
Target Start/End: Original strand, 48569441 - 48569479
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattcattca 369  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  48569441 gcgagcaaaatgtgcagggtgaagagcagaattctttca 48569479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 46923698 - 46923665
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||||||||||||||||||||||    
T  46923698 gcgagcaaaatgtgcagggtgaagagcagaattc 46923665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 366
Target Start/End: Complemental strand, 15399088 - 15399006
Alignment:
Q  285 tgcgttacttaactcgcgcagtgttatatttgaaaaag-tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattcat 366  Q
    ||||| ||||||||| |||||  ||||||||||||||  |||| || | |||| |||||||| |||||||||||| |||||||    
T  15399088 tgcgtgacttaactcacgcaggattatatttgaaaaacatgcagggcgtgagcgaaatgtgctgggtgaagagcaaaattcat 15399006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 23943687 - 23943717
Alignment:
Q  334 agcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||||||||||||||||||||||||||||||    
T  23943687 agcaaaatgtgcagggtgaagagcagaattc 23943717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 39222623 - 39222589
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    |||||||||||||||||||||||||||| ||||||    
T  39222623 gcgagcaaaatgtgcagggtgaagagcaaaattca 39222589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 30308299 - 30308266
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||||||||||||||| ||||||    
T  30308299 gcgagcaaaatgtgcagggtgaagagctgaattc 30308266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 3660227 - 3660290
Alignment:
Q  215 tcgcgcataggctcagtggtgcgagatttaagtcacgcagagcttgtgaggtgcgcatgttaagt 279  Q
    |||||||||||| || ||||||| || |||||||||||||||||| | ||||||||  |||||||    
T  3660227 tcgcgcataggc-caatggtgcgtgacttaagtcacgcagagcttataaggtgcgctagttaagt 3660290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 41192365 - 41192582
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||   |||| |||||||||||||||| | || ||||||    
T  41192365 cattgactaccgtccaagaaacgtttgtgctttagtttttaccaccggccaacttgcgcaagttaactcgcacataggctcagtggtgtgtgacttaagt 41192464  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||| ||||||||||||||||||   ||||||| | ||||||| ||||||||| ||||| ||||||||| ||||||||||| || |||| |||||||||||    
T  41192465 cacacagagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagggttatatttggaaaaagtgcagggcgcgaacaaaatgtgca 41192564  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||||||||||||||    
T  41192565 gggtgaagagcagaattc 41192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 363
Target Start/End: Complemental strand, 6728723 - 6728507
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||  |  ||||||    
T  6728723 cattgactaccgtccaagaaacgtctgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcacggcttaagt 6728624  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||| || || |||||||||||||||||||||| ||| |||||||||||||||  |||| ||||||||| |||||| |||| |  || |||||||||||      
T  6728623 cacacatagattgtgaggtgcgcatgttaagtgttgttgcgttacttaactcaagcagggttatatttggaaaaaatgcaggacgcaagcaaaatgtgat 6728524  T
Q  347 gggtgaagagcagaatt 363  Q
    |||||||||||| ||||    
T  6728523 gggtgaagagcaaaatt 6728507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 5814517 - 5814735
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgaga-tttaag 246  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||| ||||| || || |||    
T  5814517 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtataggctcagtagtgcgtgacttaaag 5814616  T
Q  247 tcacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttg-aaaaagtgcaaggtgcgagcaaaatgtgc 345  Q
    |||||||||||||||||||||||   ||||||| | ||||||| ||||||||| ||||| |||||||||| |||||||||| || || | |||||||||     
T  5814617 tcacgcagagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagggttatatttgaaaaaagtgcagggcgcaaacaaaatgtgt 5814716  T
Q  346 agggtgaagagcagaattc 364  Q
    ||||| || |||| |||||    
T  5814717 agggtaaaaagcaaaattc 5814735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 151 - 363
Target Start/End: Complemental strand, 1888023 - 1887807
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||   ||||||||| | ||||| | ||| || ||||||    
T  1888023 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgggcaacttgcgcaagttaactcgcgcatatgatcagttgggcgtgacttaagt 1887924  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||||||  ||||||||   | ||||| ||||||||| ||||   | |||||||||||| ||||||||  ||||| |||||||      
T  1887923 cacgcagagcttgtgaggtgcgtgtgttaagtgacgttgcgtgacttaactcacgcaagatcatatttgaaaaatgtgcaaggctcgagcgaaatgtgtt 1887824  T
Q  347 gggtgaagagcagaatt 363  Q
    |||||||||| ||||||    
T  1887823 gggtgaagaggagaatt 1887807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 34619883 - 34620081
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||   ||||||||||||||||| ||||| || ||||||    
T  34619883 cattgactaccgtccaagaaacgtttgtgcttcagtttttatcaccggccaacttgtgcaagttaactcgcgcataggctcagtagtgcgtgacttaagt 34619982  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||                   ||||| ||||||||| ||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  34619983 cacgcagagcttgtgagg-------------------tgcgtgacttaactcacgcagggttatatttggaaaaagtgcagggcgcgagcaaaatgtgca 34620063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 21083872 - 21083656
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||   | ||||| ||||||||| ||  | || ||||||    
T  21083872 cattgactaccgtccaagaaacgtttgtgcttcagtttt-accaccggccaacttgcgcaagttaacttgcgcagaggctcagttgtaagtgacttaagt 21083774  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||| ||||   ||||||| |  |||||| ||||||||| ||||| ||||||||||||||| ||| | || || |||||||| ||||    
T  21083773 cacgcagagcttgtgagatgcgtgagttaagtctcactgcgtgacttaactcacgcagggttatatttgaaaaatgtgtagggcgcaagcaaaatatgca 21083674  T
Q  347 gggtgaagagcagaattc 364  Q
    || |||| ||||||||||    
T  21083673 ggatgaatagcagaattc 21083656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 151 - 363
Target Start/End: Original strand, 4616620 - 4616836
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||   ||||| | ||||||||||| ||| || ||||||    
T  4616620 cattgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtagaggctcagtggggcgtgacttaagt 4616719  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||||||||||||| |||||   |||||||    | |||| ||||||||| | ||  |||||||||||||||  |||| || |||||| ||||||||     
T  4616720 cacgcagagcttgtgaagtgcgtgagttaagtcacacagcgtgacttaactcacacatggttatatttgaaaaacatgcagggcgcgagcgaaatgtgct 4616819  T
Q  347 gggtgaagagcagaatt 363  Q
    ||||||| |||| ||||    
T  4616820 gggtgaaaagcaaaatt 4616836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 32737854 - 32737959
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||   || |||| ||||||||||||||| || ||||||    
T  32737854 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccatcggccaacttgcgcaagttaactcacgcagaggctcagtggtgcgtgacttaagt 32737953  T
Q  248 cacgca 253  Q
    ||||||    
T  32737954 cacgca 32737959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 266
Target Start/End: Original strand, 5290683 - 5290800
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| |||||||| ||||| | |||| ||||||||||||||||| ||||||||||| ||||   || |||||||||||||||||||| || ||||||    
T  5290683 cattgaccaccgtcca-gaaacgtctgtgtttcagtttttaccaccgtccaacttgcgcgagttaactcacgcataggctcagtggtgcgtgacttaagt 5290781  T
Q  248 cacgcagagcttgtgaggt 266  Q
    ||||||||||||| |||||    
T  5290782 cacgcagagcttgagaggt 5290800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 26257773 - 26257879
Alignment:
Q  167 agaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtgg-tgcgagatttaagtcacgcagagcttgtg 262  Q
    |||||| |||||||||||||||||||||||| | ||||||||||||||   | ||||| ||||||||||| || | || ||||||||||||||| |||||    
T  26257773 agaaacgtttgtgcttcagtttttaccaccgtctaacttgcgcaagttaacttgcgcagaggctcagtggatgtgtgacttaagtcacgcagagtttgtg 26257872  T
Q  263 aggtgcg 269  Q
    |||||||    
T  26257873 aggtgcg 26257879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 37057304 - 37057183
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| ||||||| | |||| |||||||||||||||||||||||  | |||||||  |||||   ||||| | || || ||||||||| || ||||||    
T  37057304 cattgaccaccgtcccaaaaacgtttgtgcttcagtttttaccaccaactaacttgcataagttaactcgcgtaaagacttagtggtgcgtgacttaagt 37057205  T
Q  248 cacgcagagcttgtgaggtgcg 269  Q
    ||||||||||||||||||||||    
T  37057204 cacgcagagcttgtgaggtgcg 37057183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 304
Target Start/End: Complemental strand, 29908603 - 29908451
Alignment:
Q  154 tgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcac 250  Q
    |||| ||||||||| |||| ||||| |||||||| | ||||||||||||| |||   ||||   |||||||||||| |||||| ||| || |||||||||    
T  29908603 tgaccaccgtccaaaaaacgtttgttcttcagttctaaccaccggccaacgtgcatgagttaactcgcgcataggc-cagtggcgcgtgacttaagtcac 29908505  T
Q  251 gcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgca 304  Q
    |||||| || | ||||||||| |||||||   || |||| |||||||| |||||    
T  29908504 gcagaggttataaggtgcgcaagttaagtcacgcagcgtaacttaacttgcgca 29908451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 365
Target Start/End: Complemental strand, 32733972 - 32733933
Alignment:
Q  326 aaggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  32733972 aaggtgcgagcaaaatgtgcatggtgaagagcagaattca 32733933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 42242118 - 42242152
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||||||||||||||||||||||||| |||||    
T  42242118 gcgagcaaaatgtgcagggtgaagagcagtattca 42242152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 34619793 - 34619834
Alignment:
Q  61 tttttataggtggtatattgtatatggcacttaatgaagtcc 102  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  34619793 tttttataggtggtataaggtatatggcacttaatgaggtcc 34619834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 43837540 - 43837507
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||||||||||||||||||||||||| ||||    
T  43837540 gcgagcaaaatgtgcagggtgaagagcagtattc 43837507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 41192275 - 41192311
Alignment:
Q  61 tttttataggtggtatattgtatatggcacttaatga 97  Q
    |||||||||||||||||  ||||||||||||||||||    
T  41192275 tttttataggtggtataaggtatatggcacttaatga 41192311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 11599124 - 11598907
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||||| |||||||  || ||||||    
T  11599124 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcggtggtgcatgacttaagt 11599025  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||||||   ||||||| | || | || | ||||||| ||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  11599024 cacgcagagcttgtgaggtgcgtgagttaagtctcgcggtgtgagttaactcacgcagggttatatttggaaaaagtgcagggcgcgagcaaaatgtgca 11598925  T
Q  347 gggtgaagagcagaattc 364  Q
    |||||||||||| |||||    
T  11598924 gggtgaagagcaaaattc 11598907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 159 - 364
Target Start/End: Original strand, 30634105 - 30634314
Alignment:
Q  159 accgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgcaga 255  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||||||||||||   || || | ||||||||||||||| || |||||||||| |||    
T  30634105 accgtcccaaaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcacgtagaggctcagtggtgcgtgacttaagtcacgtaga 30634204  T
Q  256 gcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgcagggtgaag 354  Q
    ||||||||||||||   ||||||| | ||||||| ||||||||| ||||| ||||||||| ||||| ||||| || |||||| ||||||   ||||||||    
T  30634205 gcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagggttatatttggaaaatgtgcagggcgcgagcgaaatgtattgggtgaag 30634304  T
Q  355 agcagaattc 364  Q
    |||| |||||    
T  30634305 agcaaaattc 30634314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 3515201 - 3515321
Alignment:
Q  152 attgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtc 248  Q
    |||||| ||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||   ||||| | ||||||||||||||| || |||||||    
T  3515201 attgaccaccgtccgaaaaacgtttgtgctacagtttttaccaccggccaacttgcgcaagttaactcgcgtagaggctcagtggtgcgtgacttaagtc 3515300  T
Q  249 acgcagagcttgtgaggtgcg 269  Q
    ||||| ||||||||| |||||    
T  3515301 acgcaaagcttgtgaagtgcg 3515321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 5741211 - 5741178
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||||||||| |||||||||||||||||||||||    
T  5741211 gcgagcaaaaagtgcagggtgaagagcagaattc 5741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 11599208 - 11599167
Alignment:
Q  61 tttttataggtggtatattgtatatggcacttaatgaagtcc 102  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  11599208 tttttataggtggtataaagtatatggcacttaatgaggtcc 11599167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 7e-59; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 1081870 - 1082086
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||| || ||||||    
T  1081870 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccggtcaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagt 1081969  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||||||   ||||||| | ||||||| ||||||||| | ||| || | |||| ||||||||||| || |||| |||||||||||    
T  1081970 cacgcagagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacacagggtcaaatttggaaaaagtgcagggcgcga-caaaatgtgca 1082068  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||| ||||||||||    
T  1082069 gggtgaatagcagaattc 1082086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 151 - 356
Target Start/End: Complemental strand, 2786837 - 2786628
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||  || ||||||    
T  2786837 cattgactaccgtccaaaaaatatttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcatgacttaagt 2786738  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||||||   ||||||| | | ||||  ||||||||| ||||| ||| ||||| |||| ||||||  | ||||||||||||||||    
T  2786737 cacgcagagcttgtgaggtgcgtgagttaagtctcgttgcgcgacttaactcacgcagggttgtatttggaaagagtgcagagcgcgagcaaaatgtgca 2786638  T
Q  347 gggtgaagag 356  Q
    ||||||||||    
T  2786637 gggtgaagag 2786628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 151 - 344
Target Start/End: Complemental strand, 34954153 - 34953956
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||   ||||||||||||||||||||||  || ||||||    
T  34954153 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccagccaacttgtgcaagttaactcgcgcataggctcagtggtgcacgacttaagt 34954054  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttga-aaaagtgcaaggtgcgagcaaaatgtg 344  Q
    |||||| || |||||||||||||||||||||| ||||||| ||||||||||| || || ||| ||||||| ||||||||| || |||| |||||||||    
T  34954053 cacgcatagattgtgaggtgcgcatgttaagtgttgctgcattacttaactcacgtagggttgtatttgaaaaaagtgcagggcgcgaacaaaatgtg 34953956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 18172117 - 18172334
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||||||||||||| || ||||||    
T  18172117 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaagttaactcgcgcataagctcagtggtgcgtgacttaagt 18172216  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||||||||||||| |||||  ||||||||    |||||| ||||||||| ||||  || |||||| ||||| ||||| || |||| |||||||||||    
T  18172217 cacgcagagcttgtgatgtgcgtgtgttaagtgacactgcgtgacttaactcacgcaaggtcatatttaaaaaatgtgcagggcgcgaacaaaatgtgca 18172316  T
Q  347 gggtgaagagcagaattc 364  Q
     ||||||||||| |||||    
T  18172317 aggtgaagagcaaaattc 18172334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 12144151 - 12143990
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||   ||| ||||||||||||||||||| || ||||||    
T  12144151 cattgactaccgtccaagaaacgtttgtgcttcagtttttaacactgaccaacttgcgcaagttaactcgtgcataggctcagtggtgcgtgacttaagt 12144052  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgtt 309  Q
    |||||| |||||||||||||||   ||||||| | ||||||| ||||||||| |||||||||    
T  12144051 cacgcaaagcttgtgaggtgcgtgagttaagtctcgctgcgtgacttaactcacgcagtgtt 12143990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 7662186 - 7662291
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||| || |||| |    
T  7662186 cattgactaccgttcaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaaatcgcgcataggctcagtggtgcgtgacttaact 7662285  T
Q  248 cacgca 253  Q
    ||||||    
T  7662286 cacgca 7662291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 322
Target Start/End: Original strand, 40033983 - 40034158
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcag-tttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaag 246  Q
    ||||||| ||||||||| |||||||||| |||||| |||||||||||| ||||||||||| ||||   ||||| | ||||||||||||||| || |||||    
T  40033983 cattgaccaccgtccaaaaaacatttgttcttcagttttttaccaccgaccaacttgcgcgagttaactcgcgtagaggctcagtggtgcgtgacttaag 40034082  T
Q  247 tcacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaag 322  Q
    || |||||   |||| ||||||    |||||||   | ||||| |||||||||  |||| ||||||||||||||||    
T  40034083 tctcgcagtaattgtaaggtgcatgagttaagtcacgatgcgtgacttaactcatgcagggttatatttgaaaaag 40034158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 269
Target Start/End: Original strand, 43147409 - 43147529
Alignment:
Q  152 attgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtc 248  Q
    |||||| | ||| ||| ||| ||||||  ||||||||||||||||||||||||||||| ||||   ||| | | ||||||||||||||| || |||||||    
T  43147409 attgaccatcgttcaaaaaatatttgtttttcagtttttaccaccggccaacttgcgcgagttaactcgtgtagaggctcagtggtgcgtgacttaagtc 43147508  T
Q  249 acgcagagcttgtgaggtgcg 269  Q
    |||||||| ||||||| ||||    
T  43147509 acgcagagtttgtgagatgcg 43147529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 7662272 - 7662352
Alignment:
Q  285 tgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||| ||||||||| ||||  || |||||||||||| ||||| || ||||| ||||||| |||| |||||||||||||||    
T  7662272 tgcgtgacttaactcacgcaaggtcatatttgaaaaatgtgcagggcgcgagtaaaatgttcaggatgaagagcagaattc 7662352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 2743925 - 2743967
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    |||||||  |||||||||||||| |||||||||||||||||||    
T  2743925 tgcaaggcacgagcaaaatgtgctgggtgaagagcagaattca 2743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 365
Target Start/End: Complemental strand, 8688137 - 8688103
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||||||||| |||||||||||||||||||||    
T  8688137 gcgagcaaaatgtacagggtgaagagcagaattca 8688103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 20887940 - 20887974
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||||||||||||||||| |||||||||||||    
T  20887940 gcgagcaaaatgtgcagggtggagagcagaattca 20887974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 34954968 - 34955010
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    |||||||||||||| |||||||  |||||||||||||||||||    
T  34954968 tgcaaggtgcgagcgaaatgtgatgggtgaagagcagaattca 34955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 298
Target Start/End: Original strand, 1172988 - 1173068
Alignment:
Q  217 gcgcataggctcagtggtgcgagatttaagtcacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaact 298  Q
    |||||||||| ||||||||||  | ||||||||||||||| || | |||||||| ||||||||   ||||||| ||||||||    
T  1172988 gcgcataggc-cagtggtgcgtaacttaagtcacgcagaggttataaggtgcgcttgttaagtcacgctgcgtgacttaact 1173068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 151 - 364
Target Start/End: Original strand, 49501514 - 49501731
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||   || |||||| ||||||||||||| || ||||||    
T  49501514 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccaccgaccaacttgcgcaagttaactcacgcataagctcagtggtgcgtgacttaagt 49501613  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||||||   ||||||| | |||| || ||||||||| ||||| ||||||||| |||||| |||| |  |||| |||||||| ||    
T  49501614 cacgcagagcttgtgaggtgcgtgagttaagtctcgctgtgtgacttaactcacgcagggttatatttggaaaaaatgcaggacgcgaacaaaatgtaca 49501713  T
Q  347 gggtgaagagcagaattc 364  Q
    ||||||||||||||||||    
T  49501714 gggtgaagagcagaattc 49501731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 151 - 267
Target Start/End: Complemental strand, 41650051 - 41649932
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||| ||||| || ||||||    
T  41650051 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaaattaactcgcgcataggctcagtagtgcgtgacttaagt 41649952  T
Q  248 cacgcagagcttgtgaggtg 267  Q
    ||| ||||||||||||||||    
T  41649951 cacacagagcttgtgaggtg 41649932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 151 - 361
Target Start/End: Original strand, 49742081 - 49742295
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||  ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||   |||||||||| |||||||||||| || ||||||    
T  49742081 cattgactattgtccaagaaacgtttgtgcttcagtttctaccaccgggcaacttgcgcaagttaactcgcgcatagactcagtggtgcgtgacttaagt 49742180  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaag-tgcaaggtgcgagcaaaatgtgca 346  Q
    ||||||||||||||||||||||   |||||||   ||||||| |||||||| |||||  |  || ||||  |  | |||| |||||||| ||||||||||    
T  49742181 cacgcagagcttgtgaggtgcgtgagttaagtcacgctgcgtgacttaactagcgcaaggacatttttggcatggctgcagggtgcgagtaaaatgtgca 49742280  T
Q  347 gggtgaagagcagaa 361  Q
     ||||||||||||||    
T  49742281 tggtgaagagcagaa 49742295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 49303313 - 49303208
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||   ||||||| ||||||||||||| | || ||||||    
T  49303313 cattgattaccgtcctagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcgagttaactcgcgcagaggctcagtggtgtgtgacttaagt 49303214  T
Q  248 cacgca 253  Q
    ||||||    
T  49303213 cacgca 49303208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 23029752 - 23029596
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||| || |||||||| ||||||||||||||| | |||||||   || |||||||||||||||||||  || ||||||    
T  23029752 cattgactaccgtccaagaaacgtttctgtttcagtttctaccaccggccaactagggcaagttaactcccgcataggctcagtggtgcatgacttaagt 23029653  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgca 304  Q
    |||||| ||||| |||| ||||   |||||||   ||||||| |||||||| |||||    
T  23029652 cacgcaaagcttatgagatgcgtgagttaagtcacgctgcgtgacttaactagcgca 23029596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 2447699 - 2447597
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||   ||||||||||||| |||| |||| || |||| |    
T  2447699 cattgactaccgtccaagaaacgtttgtgcttcagtttttaccactggccaacttgcgccagttaactcgcgcataggcttagtgttgcgtgacttaact 2447600  T
Q  248 cac 250  Q
    |||    
T  2447599 cac 2447597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 237 - 365
Target Start/End: Original strand, 53401545 - 53401672
Alignment:
Q  237 gagatttaagtcacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttg-aaaaagtgcaaggtgcgag 335  Q
    |||| |||||||||||||||||| |||||||||   ||||||| | ||||||| ||||||||| ||||| || | ||||| ||||||||| ||| |||||    
T  53401545 gagacttaagtcacgcagagcttatgaggtgcgtgagttaagtctcgctgcgtaacttaactcacgcag-gtcaaatttgaaaaaagtgc-aggcgcgag 53401642  T
Q  336 caaaatgtgcagggtgaagagcagaattca 365  Q
    | ||||||| ||||||||||| ||||||||    
T  53401643 cgaaatgtgtagggtgaagaggagaattca 53401672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 279
Target Start/End: Complemental strand, 48086943 - 48086816
Alignment:
Q  154 tgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcac 250  Q
    |||| ||||||||| |||| |||||   |||||| | ||||||||||||| ||||  ||||   |||||||||||| |||||||||| || ||||||||     
T  48086943 tgaccaccgtccaaaaaacgtttgttagtcagttctgaccaccggccaacgtgcgtgagttaactcgcgcataggc-cagtggtgcgtgacttaagtcat 48086845  T
Q  251 gcagagcttgtgaggtgcgcatgttaagt 279  Q
    |||||| || | ||||||||| |||||||    
T  48086844 gcagaggttataaggtgcgcaagttaagt 48086816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 2447613 - 2447533
Alignment:
Q  285 tgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||| ||||||||| | ||| || | |||||||||| ||||| ||  ||||||||||||||| |||||||||||||||||    
T  2447613 tgcgtgacttaactcacacagggtcaaatttgaaaaaagtgcagggcacgagcaaaatgtgcaaggtgaagagcagaattc 2447533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 2451961 - 2451999
Alignment:
Q  325 caaggtgcgagcaaaatgtgcagggtgaagagcagaatt 363  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  2451961 caaggtgcgagcgaaatgtgctgggtgaagagcagaatt 2451999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 365
Target Start/End: Complemental strand, 32211099 - 32211061
Alignment:
Q  327 aggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  32211099 aggtgcgagcaaaatgtgctgggagaagagcagaattca 32211061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Complemental strand, 37280636 - 37280603
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||||| ||||||||||||||||||||||||||    
T  37280636 gcgagcagaatgtgcagggtgaagagcagaattc 37280603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 39417960 - 39417993
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||||||||||||| |||||||||||||||||||    
T  39417960 gcgagcaaaatgtggagggtgaagagcagaattc 39417993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 41650997 - 41651034
Alignment:
Q  328 ggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  41650997 ggtgcgagcgaaatgtgctgggtgaagagcagaattca 41651034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 35161710 - 35161495
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||||   ||||||||||||||||||||||| || | ||||    
T  35161710 cattgactaccgtctaagaaacgtttgtgcttcagtttt-accaccggtcaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgact-aagt 35161613  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgca 346  Q
    |||||||||||||||||||| |  |||||||| | ||||| | ||||||||| ||||  ||||||||| ||||| ||||| || ||||||||||||||||    
T  35161612 cacgcagagcttgtgaggtgggtgtgttaagtctcgctgcatgacttaactcacgcatggttatatttaaaaaaagtgcagggcgcgagcaaaatgtgca 35161513  T
Q  347 gggtgaagagcagaattc 364  Q
    |||||||||| |||||||    
T  35161512 gggtgaagagtagaattc 35161495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 361
Target Start/End: Complemental strand, 4322801 - 4322587
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||| ||  |||||    
T  4322801 cattggctatcgcccaagaaacatttgtgcttcagtttttaccaccggtcaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacctaagt 4322702  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
     ||||||| |||||||||||||   ||||||| | ||||||| | ||||||| | |||  ||||||||  |||||||||| || ||||||||||||||||    
T  4322701 tacgcagaacttgtgaggtgcgtgagttaagtctcgctgcgtgagttaactcacacaggattatatttaaaaaaagtgcagggcgcgagcaaaatgtgca 4322602  T
Q  347 gggtgaagagcagaa 361  Q
    | |||||||||||||    
T  4322601 gagtgaagagcagaa 4322587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 215 - 364
Target Start/End: Original strand, 15743238 - 15743388
Alignment:
Q  215 tcgcgcataggctcagtggtgcgagatttaagtcacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatt 314  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||   ||||||| ||||||||| ||||||||| | |||  |||||||    
T  15743238 tcgcgcataggctcagtggtgcgtgacttaagtcacgcagagcttgtgaggtgcgtgagttaagtcttgctgcgtgacttaactcacacaggattatatt 15743337  T
Q  315 t-gaaaaagtgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    | ||||||||||| || ||||||||||||||||||||||||||||||||||    
T  15743338 tggaaaaagtgcagggcgcgagcaaaatgtgcagggtgaagagcagaattc 15743388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 167 - 365
Target Start/End: Original strand, 4759206 - 4759408
Alignment:
Q  167 agaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgcagagcttgtga 263  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||   ||||||| ||||||||||||||  || ||||||||||||||||||||||    
T  4759206 agaaacgtttgtgcttcagtttttaccaccgtccaacttgcgcaagttaactcgcgcagaggctcagtggtgcatgacttaagtcacgcagagcttgtga 4759305  T
Q  264 ggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatatttgaaaaa-gtgcaaggtgcgagcaaaatgtgcagggtgaagagcagaat 362  Q
    ||||||  ||||||||   | ||||| ||||||||  ||||| |||||||||||||||  ||   || |||||||||||||||  ||||||||||| |||    
T  4759306 ggtgcgtgtgttaagtcacgttgcgtgacttaacttacgcagggttatatttgaaaaacatgttgggcgcgagcaaaatgtgctaggtgaagagcaaaat 4759405  T
Q  363 tca 365  Q
    |||    
T  4759406 tca 4759408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 151 - 364
Target Start/End: Complemental strand, 1217896 - 1217679
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagt---ttcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||| ||||||| |||||| |||||| |||||||||||||||||||||||||||||||||    ||||||| |||||| |||||||| || ||||||    
T  1217896 cattgaccaccgtcccagaaacgtttgtgtttcagtttttaccaccggccaacttgcgcaagtcaactcgcgcagaggctcggtggtgcgtgacttaagt 1217797  T
Q  248 cacgcagagcttgtgaggtgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgca 346  Q
    ||| || |||||||||||||||   |||||||   ||  ||| ||||||||| | ||| ||||||||| |||||  |||| || |||||| ||||||||     
T  1217796 cacacaaagcttgtgaggtgcgtgagttaagtcacgcaacgtgacttaactcacacagggttatatttggaaaacatgcagggcgcgagcgaaatgtgct 1217697  T
Q  347 gggtgaagagcagaattc 364  Q
    | |||||||||| |||||    
T  1217696 gagtgaagagcaaaattc 1217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 269
Target Start/End: Original strand, 5913098 - 5913219
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||   |||| || ||||||| ||||| | || ||||||    
T  5913098 cattggctaccgtcccagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcgagttaactcgcacagaggctcaatggtgtgtgacttaagt 5913197  T
Q  248 cacgcagagcttgtgaggtgcg 269  Q
    ||||||||||||||||||||||    
T  5913198 cacgcagagcttgtgaggtgcg 5913219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 9039770 - 9039649
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    ||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||   ||||||| ||| ||||||||| | || ||||||    
T  9039770 cattgactaccatccaagaaacgtttgtgctgtagtttttaccaccggccaacttgcgcaagttaactcgcgcagaggttcagtggtgtgtgacttaagt 9039671  T
Q  248 cacgcagagcttgtgaggtgcg 269  Q
    |||||| || ||||||||||||    
T  9039670 cacgcaaaggttgtgaggtgcg 9039649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 169 - 365
Target Start/End: Complemental strand, 42182747 - 42182547
Alignment:
Q  169 aaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgcagagcttgtgagg 265  Q
    |||| |||||||||||||||||||||||||||||||||||||||||   ||||| | || |||||||||||| || ||| |||||| ||||||||||||     
T  42182747 aaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagttaactcgcgtagagactcagtggtgcgtgacttaggtcacgtagagcttgtgaga 42182648  T
Q  266 tgcgcatgttaagttttgctgcgttacttaactcgcgcagtgttatattt-gaaaaagtgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    ||||   |||||||   || | || ||||||||| |||||  |||||||| |||||  |||| || |||||| |||||||  |||||||||||| |||||    
T  42182647 tgcgtgagttaagtcacgcagtgtgacttaactcacgcaggattatatttggaaaacatgcagggcgcgagcgaaatgtgttgggtgaagagcaaaattc 42182548  T
Q  365 a 365  Q
    |    
T  42182547 a 42182547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 15739689 - 15739752
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt 214  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15739689 cattgcctaccgtccaagaaacgtttgtgcttcagtttttaccaccggccaacttgcgcaagtt 15739752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 2766845 - 2766902
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcg 208  Q
    ||||||| ||||||||| |||| ||||| |||||||||| ||||| ||||||||||||    
T  2766845 cattgaccaccgtccaaaaaacgtttgttcttcagttttgaccactggccaacttgcg 2766902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 365
Target Start/End: Original strand, 5076331 - 5076373
Alignment:
Q  323 tgcaaggtgcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    ||||||| |||||||| |||||||||||| |||||||||||||    
T  5076331 tgcaaggcgcgagcaacatgtgcagggtggagagcagaattca 5076373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 365
Target Start/End: Original strand, 9512532 - 9512566
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattca 365  Q
    |||||||||| ||||||||||||||||||||||||    
T  9512532 gcgagcaaaaagtgcagggtgaagagcagaattca 9512566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 23810856 - 23810901
Alignment:
Q  168 gaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt 214  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  23810856 gaaacgtttgtgcttcagtttt-accaccgtccaacttgcgcaagtt 23810901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 4322891 - 4322850
Alignment:
Q  61 tttttataggtggtatattgtatatggcacttaatgaagtcc 102  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  4322891 tttttataggtggtataaggtatatggcacttaatgaggtcc 4322850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 364
Target Start/End: Original strand, 43693731 - 43693764
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaattc 364  Q
    |||||||||||||||||||||||||||| |||||    
T  43693731 gcgagcaaaatgtgcagggtgaagagcaaaattc 43693764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 23542793 - 23542836
Alignment:
Q  215 tcgcgcataggctcagtggtgcgagatttaagtcacgcagagctt 259  Q
    |||||||||||| |||||||||| || ||||||||||||||||||    
T  23542793 tcgcgcataggc-cagtggtgcgtgaattaagtcacgcagagctt 23542836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 37227020 - 37226988
Alignment:
Q  331 gcgagcaaaatgtgcagggtgaagagcagaatt 363  Q
    ||||||||||||||| |||||||||||||||||    
T  37227020 gcgagcaaaatgtgctgggtgaagagcagaatt 37226988  T

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Target: scaffold0051 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 269
Target Start/End: Complemental strand, 20198 - 20077
Alignment:
Q  151 cattgactaccgtccaagaaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagt 247  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||| || ||||||    
T  20198 cattgactaccgtccaagaaacgtttgtgcttcaatttttaccaccggccaacttgcgcaagttaactcgcgcataggctcagtggtgcgtgacttaagt 20099  T
Q  248 cacgcagagcttgtgaggtgcg 269  Q
    |||||| |||||||||||||||    
T  20098 cacgcaaagcttgtgaggtgcg 20077  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 333 - 367
Target Start/End: Complemental strand, 256422 - 256388
Alignment:
Q  333 gagcaaaatgtgcagggtgaagagcagaattcatt 367  Q
    |||||||||||||||||||||||||||||||||||    
T  256422 gagcaaaatgtgcagggtgaagagcagaattcatt 256388  T

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Target: scaffold0753 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0753
Description:

Target: scaffold0753; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 4085 - 3995
Alignment:
Q  169 aaacatttgtgcttcagtttttaccaccggccaacttgcgcaagtt---tcgcgcataggctcagtggtgcgagatttaagtcacgcagag 256  Q
    |||| ||||| |||||||| | |||||||| |||||||||  ||||   ||||| | ||||||||||||||| || |||||||||||||||    
T  4085 aaacgtttgttcttcagttctgaccaccggtcaacttgcgtgagttaactcgcggaaaggctcagtggtgcgtgacttaagtcacgcagag 3995  T

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