View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11851_low_55 (Length: 290)
Name: NF11851_low_55
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11851_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 33596507 - 33596770
Alignment:
| Q |
17 |
cagaaggtccctatccattgattagggaattgccaccttgtgcatattacaccaccaatttgtaaatatcttgttctggaaccaaaact--gtctccgta |
114 |
Q |
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| T |
33596507 |
cagaaggtccctatccattgattagggaattgccaccttgtgcatattacaccaccaatttgtaaatatcttgttctggaaccaaaactttgtctctgta |
33596606 |
T |
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| Q |
115 |
atcagatcagtgataaccgctattattcaattgtttatataagcatgtggtgtatcatgaaaatgtcatgtgaagtaaggtacttgtatagtcagaataa |
214 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
33596607 |
atcagatcaatgataaccgctattattcaattgtttatataagcatgtggtgtatcatgaaaatgtcatgtgaagtgaggtacttgtatagtcagaataa |
33596706 |
T |
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| Q |
215 |
gtaagttctcattttattatagaaaagaaaatcggcaattcaactcttcactacttctcattct |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33596707 |
gtaagttctcattttattatagaaaagaaaatcggcaattcaactcttcactactactcattct |
33596770 |
T |
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