View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11851_low_56 (Length: 289)

Name: NF11851_low_56
Description: NF11851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11851_low_56
NF11851_low_56
[»] chr7 (58 HSPs)
chr7 (18-199)||(4228872-4229053)
chr7 (242-289)||(43705617-43705664)
chr7 (242-289)||(1885316-1885363)
chr7 (242-289)||(3699822-3699869)
chr7 (242-289)||(10338181-10338228)
chr7 (242-289)||(10338388-10338435)
chr7 (242-289)||(18801209-18801256)
chr7 (242-289)||(32610678-32610725)
chr7 (242-289)||(33228841-33228888)
chr7 (242-289)||(37373528-37373575)
chr7 (242-289)||(40501227-40501274)
chr7 (242-289)||(43705460-43705507)
chr7 (242-289)||(47810214-47810261)
chr7 (243-289)||(18668758-18668804)
chr7 (243-289)||(35088037-35088083)
chr7 (243-289)||(43704603-43704649)
chr7 (242-286)||(21171289-21171333)
chr7 (245-289)||(48755623-48755667)
chr7 (242-289)||(6772722-6772769)
chr7 (242-289)||(6773465-6773512)
chr7 (242-289)||(8439760-8439807)
chr7 (242-289)||(29754761-29754808)
chr7 (246-289)||(32610885-32610928)
chr7 (242-289)||(33341292-33341339)
chr7 (246-289)||(37725877-37725920)
chr7 (242-289)||(40501530-40501577)
chr7 (242-289)||(47809484-47809531)
chr7 (243-289)||(1884235-1884281)
chr7 (243-289)||(7345909-7345955)
chr7 (243-289)||(38778972-38779018)
chr7 (20-61)||(5039541-5039582)
chr7 (244-289)||(41618574-41618619)
chr7 (242-286)||(28648284-28648328)
chr7 (18-61)||(19914823-19914866)
chr7 (18-61)||(22268150-22268193)
chr7 (242-289)||(35087472-35087518)
chr7 (242-289)||(35480202-35480249)
chr7 (246-289)||(37375169-37375212)
chr7 (246-289)||(38001502-38001545)
chr7 (19-61)||(14537811-14537853)
chr7 (243-289)||(19278348-19278394)
chr7 (18-60)||(27875208-27875250)
chr7 (243-289)||(33229608-33229654)
chr7 (20-58)||(34659174-34659212)
chr7 (243-289)||(36702772-36702818)
chr7 (243-277)||(38002601-38002635)
chr7 (243-289)||(41616619-41616665)
chr7 (19-61)||(43862094-43862136)
chr7 (18-60)||(43925458-43925500)
chr7 (18-60)||(48804629-48804671)
chr7 (19-64)||(39474881-39474926)
chr7 (19-60)||(43346901-43346942)
chr7 (246-286)||(1904098-1904138)
chr7 (18-54)||(9685691-9685727)
chr7 (246-286)||(21171564-21171604)
chr7 (245-289)||(30224051-30224095)
chr7 (245-289)||(34558376-34558420)
chr7 (245-289)||(43935182-43935226)
[»] chr2 (51 HSPs)
chr2 (242-289)||(15816741-15816788)
chr2 (242-289)||(27264648-27264695)
chr2 (242-289)||(5564053-5564100)
chr2 (242-289)||(5565220-5565267)
chr2 (242-289)||(14482166-14482213)
chr2 (242-289)||(17859341-17859388)
chr2 (242-289)||(43015533-43015580)
chr2 (243-289)||(10477586-10477632)
chr2 (243-289)||(15808075-15808121)
chr2 (243-289)||(21545144-21545190)
chr2 (242-289)||(6706920-6706967)
chr2 (243-286)||(17179329-17179372)
chr2 (242-289)||(17858659-17858706)
chr2 (242-289)||(27262707-27262754)
chr2 (243-289)||(15268376-15268422)
chr2 (242-284)||(17179054-17179096)
chr2 (18-60)||(21180435-21180477)
chr2 (18-60)||(38005345-38005387)
chr2 (243-289)||(41313342-41313388)
chr2 (245-286)||(30202690-30202731)
chr2 (244-289)||(42772434-42772479)
chr2 (246-286)||(30202961-30203001)
chr2 (242-289)||(3254850-3254897)
chr2 (242-289)||(3665218-3665265)
chr2 (242-289)||(7038407-7038454)
chr2 (242-289)||(11391866-11391913)
chr2 (242-289)||(11392031-11392078)
chr2 (242-289)||(11408527-11408574)
chr2 (242-289)||(11408692-11408739)
chr2 (242-285)||(17858452-17858495)
chr2 (242-289)||(21541055-21541102)
chr2 (18-61)||(26805256-26805299)
chr2 (242-277)||(33837842-33837877)
chr2 (18-57)||(37560119-37560158)
chr2 (242-289)||(41295099-41295146)
chr2 (242-289)||(42027187-42027234)
chr2 (18-60)||(7747217-7747259)
chr2 (18-60)||(8410074-8410116)
chr2 (243-289)||(12852881-12852927)
chr2 (243-289)||(12854179-12854225)
chr2 (243-289)||(14573883-14573929)
chr2 (18-60)||(18902651-18902693)
chr2 (18-60)||(20612657-20612699)
chr2 (243-289)||(42368383-42368428)
chr2 (244-289)||(2305536-2305581)
chr2 (18-63)||(2528462-2528507)
chr2 (19-60)||(12864167-12864208)
chr2 (19-60)||(23500803-23500844)
chr2 (244-289)||(43019321-43019366)
chr2 (257-289)||(10477351-10477383)
chr2 (242-286)||(20948396-20948440)
[»] chr1 (64 HSPs)
chr1 (242-289)||(27115527-27115574)
chr1 (242-289)||(47512159-47512206)
chr1 (242-289)||(31860533-31860580)
chr1 (244-289)||(4387989-4388034)
chr1 (242-289)||(25866747-25866794)
chr1 (242-289)||(50678360-50678407)
chr1 (242-289)||(51760033-51760080)
chr1 (243-289)||(52370978-52371024)
chr1 (19-64)||(33418238-33418283)
chr1 (242-289)||(1061527-1061574)
chr1 (242-289)||(3978038-3978085)
chr1 (242-289)||(14390252-14390299)
chr1 (242-289)||(20953282-20953329)
chr1 (242-289)||(25866155-25866202)
chr1 (242-289)||(28309756-28309803)
chr1 (242-289)||(29001197-29001244)
chr1 (242-289)||(33941311-33941358)
chr1 (246-289)||(42244502-42244545)
chr1 (242-289)||(52371184-52371231)
chr1 (246-289)||(52371859-52371902)
chr1 (18-60)||(5855466-5855508)
chr1 (243-289)||(27690704-27690750)
chr1 (243-289)||(30548491-30548537)
chr1 (247-289)||(31859590-31859632)
chr1 (243-289)||(37694648-37694694)
chr1 (243-289)||(47511362-47511408)
chr1 (242-283)||(9575312-9575353)
chr1 (246-286)||(25035356-25035396)
chr1 (246-286)||(25040569-25040609)
chr1 (242-289)||(2236807-2236854)
chr1 (242-289)||(2238053-2238100)
chr1 (242-289)||(13567160-13567207)
chr1 (242-289)||(14312769-14312816)
chr1 (242-289)||(20170761-20170808)
chr1 (242-289)||(20171237-20171284)
chr1 (242-289)||(27114884-27114931)
chr1 (242-289)||(28999834-28999881)
chr1 (242-289)||(32824209-32824256)
chr1 (242-289)||(46280846-46280893)
chr1 (242-289)||(47511952-47511999)
chr1 (242-289)||(48974481-48974528)
chr1 (246-284)||(1898002-1898040)
chr1 (251-289)||(4388112-4388150)
chr1 (18-60)||(11398010-11398052)
chr1 (243-289)||(25865949-25865995)
chr1 (18-56)||(32151044-32151082)
chr1 (243-289)||(32823453-32823499)
chr1 (243-289)||(33850297-33850343)
chr1 (243-289)||(33943635-33943681)
chr1 (243-289)||(35683050-35683096)
chr1 (243-289)||(51424246-51424292)
chr1 (243-289)||(51760747-51760793)
chr1 (18-63)||(8763932-8763977)
chr1 (19-60)||(10422732-10422773)
chr1 (18-63)||(12036866-12036911)
chr1 (20-61)||(17642128-17642169)
chr1 (22-59)||(41663982-41664019)
chr1 (19-60)||(48798193-48798234)
chr1 (18-62)||(15238228-15238272)
chr1 (245-289)||(26056222-26056266)
chr1 (245-289)||(27114680-27114724)
chr1 (18-62)||(31152658-31152702)
chr1 (246-286)||(38458084-38458124)
chr1 (245-289)||(39193578-39193622)
[»] chr5 (60 HSPs)
chr5 (242-289)||(32780157-32780204)
chr5 (242-289)||(6914887-6914934)
chr5 (243-286)||(8705850-8705893)
chr5 (243-289)||(5062261-5062307)
chr5 (243-289)||(7345465-7345511)
chr5 (243-289)||(28236968-28237014)
chr5 (18-63)||(41163580-41163625)
chr5 (245-289)||(2472505-2472549)
chr5 (245-289)||(16802364-16802408)
chr5 (242-286)||(32411958-32412002)
chr5 (242-289)||(1982706-1982753)
chr5 (242-289)||(2472324-2472371)
chr5 (243-286)||(3076818-3076861)
chr5 (242-289)||(5061022-5061069)
chr5 (242-289)||(6914709-6914756)
chr5 (242-289)||(12937957-12938004)
chr5 (242-289)||(12952108-12952155)
chr5 (246-289)||(12952809-12952852)
chr5 (246-289)||(18693696-18693739)
chr5 (243-286)||(19050744-19050787)
chr5 (242-289)||(21306585-21306632)
chr5 (242-289)||(21314423-21314470)
chr5 (242-289)||(21387631-21387678)
chr5 (246-289)||(37371055-37371098)
chr5 (242-289)||(37380374-37380421)
chr5 (242-284)||(15153871-15153913)
chr5 (243-289)||(16802196-16802242)
chr5 (243-289)||(20988685-20988731)
chr5 (18-60)||(23383592-23383634)
chr5 (18-60)||(26077085-26077127)
chr5 (242-284)||(38394783-38394825)
chr5 (19-60)||(18136402-18136443)
chr5 (245-289)||(1982913-1982957)
chr5 (18-62)||(5732041-5732085)
chr5 (246-286)||(19051017-19051057)
chr5 (21-60)||(1538375-1538414)
chr5 (242-289)||(4568049-4568096)
chr5 (18-61)||(9812815-9812858)
chr5 (18-61)||(12704957-12705000)
chr5 (242-289)||(15510338-15510385)
chr5 (242-289)||(20991724-20991771)
chr5 (242-289)||(21389216-21389263)
chr5 (18-61)||(28857071-28857114)
chr5 (18-61)||(30349522-30349565)
chr5 (18-61)||(39728330-39728373)
chr5 (18-60)||(6767172-6767214)
chr5 (18-60)||(19572668-19572710)
chr5 (22-56)||(25950707-25950741)
chr5 (18-60)||(28856921-28856963)
chr5 (18-60)||(35403633-35403675)
chr5 (244-289)||(12937785-12937830)
chr5 (242-279)||(24805285-24805322)
chr5 (22-63)||(38297089-38297130)
chr5 (246-286)||(641688-641728)
chr5 (246-286)||(3077062-3077102)
chr5 (246-286)||(10085923-10085963)
chr5 (245-289)||(15613502-15613546)
chr5 (18-62)||(20525780-20525824)
chr5 (245-289)||(21306792-21306835)
chr5 (245-289)||(21314630-21314673)
[»] chr4 (59 HSPs)
chr4 (242-289)||(26202461-26202508)
chr4 (242-286)||(53177096-53177140)
chr4 (242-289)||(26791499-26791546)
chr4 (242-286)||(30441603-30441647)
chr4 (242-289)||(12396949-12396996)
chr4 (242-289)||(15446745-15446792)
chr4 (242-289)||(23202234-23202281)
chr4 (242-289)||(23202830-23202877)
chr4 (246-289)||(23203037-23203080)
chr4 (243-286)||(26428651-26428694)
chr4 (242-289)||(28189372-28189419)
chr4 (242-289)||(28509948-28509995)
chr4 (242-289)||(56297754-56297801)
chr4 (243-289)||(15317697-15317743)
chr4 (243-289)||(15445431-15445477)
chr4 (243-289)||(30670989-30671035)
chr4 (18-60)||(38075381-38075423)
chr4 (18-62)||(3574567-3574611)
chr4 (242-286)||(8516930-8516974)
chr4 (246-286)||(26428923-26428963)
chr4 (18-61)||(1940895-1940938)
chr4 (246-289)||(2310857-2310900)
chr4 (18-61)||(2559254-2559297)
chr4 (17-60)||(26480069-26480112)
chr4 (247-286)||(28370461-28370500)
chr4 (242-289)||(29833366-29833413)
chr4 (242-289)||(30672139-30672186)
chr4 (242-289)||(31711086-31711133)
chr4 (242-289)||(36644940-36644987)
chr4 (18-61)||(38165974-38166017)
chr4 (243-278)||(52658906-52658941)
chr4 (242-289)||(53401526-53401573)
chr4 (18-61)||(55920981-55921024)
chr4 (242-289)||(56000281-56000328)
chr4 (18-60)||(1446774-1446816)
chr4 (18-60)||(6779159-6779201)
chr4 (22-60)||(8888970-8889008)
chr4 (18-60)||(19651566-19651608)
chr4 (18-60)||(24166398-24166440)
chr4 (243-289)||(29834507-29834553)
chr4 (18-60)||(29895735-29895777)
chr4 (243-289)||(32509040-32509086)
chr4 (243-289)||(34457643-34457689)
chr4 (18-60)||(34667723-34667765)
chr4 (18-60)||(41339516-41339558)
chr4 (18-60)||(52950030-52950072)
chr4 (18-60)||(53599008-53599050)
chr4 (243-289)||(56001343-56001389)
chr4 (242-283)||(15317908-15317949)
chr4 (242-279)||(33376212-33376249)
chr4 (242-286)||(3217687-3217731)
chr4 (242-278)||(3528191-3528227)
chr4 (18-54)||(13552068-13552104)
chr4 (22-62)||(14077892-14077932)
chr4 (242-286)||(19048898-19048942)
chr4 (246-278)||(23752014-23752046)
chr4 (246-286)||(28370719-28370759)
chr4 (242-286)||(33377442-33377486)
chr4 (242-289)||(44690930-44690978)
[»] chr3 (75 HSPs)
chr3 (242-289)||(19283728-19283775)
chr3 (242-289)||(51213445-51213492)
chr3 (243-289)||(12106582-12106628)
chr3 (242-289)||(7575553-7575600)
chr3 (242-289)||(11220733-11220780)
chr3 (242-289)||(12105353-12105400)
chr3 (242-289)||(13041941-13041988)
chr3 (242-289)||(13050018-13050065)
chr3 (242-289)||(33563943-33563990)
chr3 (242-289)||(46987319-46987366)
chr3 (242-289)||(51213652-51213699)
chr3 (243-289)||(7583705-7583751)
chr3 (243-289)||(7820385-7820431)
chr3 (243-289)||(23886901-23886947)
chr3 (243-289)||(30431370-30431416)
chr3 (243-289)||(44384371-44384417)
chr3 (243-289)||(46988544-46988590)
chr3 (243-289)||(51214241-51214287)
chr3 (243-289)||(54109491-54109537)
chr3 (244-289)||(12105560-12105605)
chr3 (244-289)||(46988340-46988385)
chr3 (243-287)||(5810203-5810247)
chr3 (242-289)||(383047-383094)
chr3 (242-289)||(23886110-23886157)
chr3 (242-289)||(23886694-23886741)
chr3 (242-289)||(30431949-30431996)
chr3 (242-289)||(30432687-30432734)
chr3 (242-289)||(47855413-47855460)
chr3 (242-289)||(48825806-48825853)
chr3 (18-61)||(54261168-54261211)
chr3 (18-60)||(10855327-10855369)
chr3 (18-60)||(13893869-13893911)
chr3 (243-289)||(29536709-29536755)
chr3 (243-289)||(30838337-30838383)
chr3 (18-60)||(48341963-48342005)
chr3 (249-286)||(42570013-42570050)
chr3 (242-279)||(51400209-51400246)
chr3 (242-286)||(2225102-2225146)
chr3 (245-289)||(35633224-35633268)
chr3 (242-289)||(13997252-13997299)
chr3 (18-61)||(15320128-15320171)
chr3 (18-61)||(29762277-29762320)
chr3 (242-289)||(30838545-30838592)
chr3 (18-61)||(32873670-32873713)
chr3 (242-289)||(32973133-32973180)
chr3 (242-289)||(34901646-34901693)
chr3 (242-289)||(39288514-39288561)
chr3 (246-289)||(40502290-40502333)
chr3 (242-289)||(46446363-46446410)
chr3 (242-289)||(52292588-52292635)
chr3 (242-289)||(53047891-53047938)
chr3 (242-277)||(53049124-53049159)
chr3 (242-289)||(55443625-55443672)
chr3 (247-289)||(381954-381996)
chr3 (18-60)||(11687231-11687273)
chr3 (243-289)||(19283936-19283982)
chr3 (243-289)||(19579369-19579415)
chr3 (243-289)||(20486008-20486054)
chr3 (18-60)||(25294903-25294945)
chr3 (18-60)||(26207923-26207965)
chr3 (18-60)||(29127862-29127904)
chr3 (243-289)||(32974298-32974344)
chr3 (18-60)||(35315899-35315941)
chr3 (18-60)||(45877397-45877439)
chr3 (18-60)||(46529992-46530034)
chr3 (243-289)||(48035399-48035445)
chr3 (243-289)||(54654041-54654087)
chr3 (18-63)||(39849012-39849057)
chr3 (19-60)||(51683077-51683118)
chr3 (244-289)||(53347073-53347118)
chr3 (249-289)||(1301033-1301073)
chr3 (245-289)||(5417123-5417167)
chr3 (243-279)||(26798991-26799027)
chr3 (20-60)||(41630636-41630676)
chr3 (242-286)||(42633964-42634008)
[»] scaffold0839 (2 HSPs)
scaffold0839 (242-289)||(19-66)
scaffold0839 (243-289)||(200-246)
[»] scaffold0007 (2 HSPs)
scaffold0007 (242-289)||(28126-28173)
scaffold0007 (242-289)||(28333-28380)
[»] chr8 (51 HSPs)
chr8 (242-289)||(3271892-3271939)
chr8 (242-289)||(3272100-3272147)
chr8 (242-285)||(15989349-15989392)
chr8 (242-289)||(29441610-29441657)
chr8 (242-289)||(30864530-30864577)
chr8 (242-289)||(39349514-39349561)
chr8 (242-289)||(40102215-40102262)
chr8 (243-289)||(3271155-3271201)
chr8 (243-289)||(21551917-21551963)
chr8 (243-289)||(21552963-21553009)
chr8 (242-286)||(41178748-41178792)
chr8 (245-289)||(45384237-45384281)
chr8 (18-61)||(6940504-6940547)
chr8 (18-61)||(15884676-15884719)
chr8 (242-289)||(15988998-15989045)
chr8 (242-289)||(40103013-40103060)
chr8 (242-289)||(45385869-45385916)
chr8 (18-60)||(44893399-44893441)
chr8 (244-289)||(24706287-24706332)
chr8 (245-289)||(15989141-15989185)
chr8 (17-61)||(24837188-24837232)
chr8 (18-61)||(2467239-2467282)
chr8 (242-289)||(3237715-3237762)
chr8 (242-289)||(3612246-3612293)
chr8 (246-289)||(3612658-3612701)
chr8 (242-289)||(4675953-4676000)
chr8 (243-286)||(7561794-7561837)
chr8 (243-286)||(8502078-8502121)
chr8 (242-289)||(21553576-21553623)
chr8 (246-289)||(21553783-21553826)
chr8 (242-289)||(24068324-24068371)
chr8 (242-289)||(30865200-30865247)
chr8 (242-289)||(39515193-39515240)
chr8 (242-289)||(40102420-40102467)
chr8 (243-289)||(6844648-6844694)
chr8 (242-284)||(7565366-7565408)
chr8 (18-60)||(8141049-8141091)
chr8 (18-60)||(10535524-10535566)
chr8 (19-61)||(13358968-13359010)
chr8 (18-60)||(17845680-17845722)
chr8 (18-60)||(22810027-22810069)
chr8 (18-60)||(24938683-24938725)
chr8 (18-60)||(34846761-34846803)
chr8 (18-60)||(38922535-38922577)
chr8 (26-63)||(27975835-27975872)
chr8 (26-63)||(28033104-28033141)
chr8 (246-289)||(3237415-3237459)
chr8 (245-289)||(13360350-13360394)
chr8 (246-286)||(19913490-19913530)
chr8 (242-278)||(41178474-41178510)
chr8 (242-278)||(43275744-43275780)
[»] chr6 (30 HSPs)
chr6 (242-289)||(21749877-21749924)
chr6 (243-289)||(5999658-5999704)
chr6 (243-289)||(19655053-19655099)
chr6 (242-289)||(8224413-8224460)
chr6 (242-289)||(11104452-11104499)
chr6 (242-289)||(12202191-12202238)
chr6 (242-289)||(12202367-12202414)
chr6 (246-289)||(33328373-33328416)
chr6 (243-289)||(12203346-12203392)
chr6 (19-61)||(14107480-14107522)
chr6 (243-289)||(17916544-17916590)
chr6 (18-60)||(19230678-19230720)
chr6 (244-289)||(27440250-27440295)
chr6 (245-289)||(28225421-28225465)
chr6 (242-289)||(2138712-2138759)
chr6 (18-61)||(2271422-2271465)
chr6 (18-61)||(8612095-8612138)
chr6 (18-61)||(9179857-9179900)
chr6 (246-289)||(17915707-17915750)
chr6 (242-289)||(17915910-17915957)
chr6 (242-289)||(18773648-18773695)
chr6 (246-289)||(21749289-21749332)
chr6 (18-60)||(3030739-3030781)
chr6 (243-289)||(19367712-19367758)
chr6 (243-289)||(19368593-19368639)
chr6 (18-60)||(21898595-21898637)
chr6 (243-289)||(26581948-26581994)
chr6 (18-56)||(32048402-32048440)
chr6 (19-60)||(8938658-8938699)
chr6 (20-60)||(21016874-21016914)
[»] scaffold0064 (2 HSPs)
scaffold0064 (242-284)||(20662-20704)
scaffold0064 (246-286)||(20389-20429)
[»] scaffold0016 (1 HSPs)
scaffold0016 (18-60)||(8831-8873)
[»] scaffold0003 (1 HSPs)
scaffold0003 (244-289)||(47066-47111)
[»] scaffold0316 (1 HSPs)
scaffold0316 (242-278)||(11857-11893)
[»] scaffold0038 (1 HSPs)
scaffold0038 (245-289)||(25919-25963)
[»] scaffold0029 (1 HSPs)
scaffold0029 (20-60)||(40990-41030)
[»] scaffold0630 (1 HSPs)
scaffold0630 (242-289)||(3127-3174)
[»] scaffold0178 (2 HSPs)
scaffold0178 (242-289)||(2340-2387)
scaffold0178 (243-279)||(1207-1243)
[»] scaffold0177 (1 HSPs)
scaffold0177 (242-289)||(1749-1796)
[»] scaffold0081 (1 HSPs)
scaffold0081 (242-289)||(2055-2102)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-61)||(68462-68505)
[»] scaffold0155 (1 HSPs)
scaffold0155 (242-284)||(5163-5205)
[»] scaffold0051 (1 HSPs)
scaffold0051 (245-286)||(39979-40020)


Alignment Details
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 4228872 - 4229053
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttgatattcaaactaattaatggatgacattttcatacaaattaggaacgaattaatc 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4228872 cttggaaggagctccttgccgctggagcccaaacaacttggtttgatattcaaactaattaatggatgacattttcatacaaattaggaacgaattaatc 4228971  T
Q  118 catctatttattttagatacaagcatagactaatttgatattattttgctatgagggaccgaatgaaaacacgaacaaatag 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4228972 catctatttattttagatacaagcatagactaatttgatattattttgctatgagtgaccgaatgaaaacacgaacaaatag 4229053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 43705664 - 43705617
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  43705664 aggcttaatacatgttttggtcccttaacttatttttgaatttcattt 43705617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 1885363 - 1885316
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  1885363 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 1885316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 3699869 - 3699822
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  3699869 aggcttaatacatgttttggtccctcaacttatttttgaatttcattt 3699822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 10338181 - 10338228
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10338181 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 10338228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 10338435 - 10338388
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10338435 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 10338388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 18801209 - 18801256
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  18801209 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 18801256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 32610678 - 32610725
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  32610678 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 32610725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 33228841 - 33228888
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33228841 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 33228888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 37373528 - 37373575
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  37373528 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 37373575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 40501227 - 40501274
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  40501227 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 40501274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 43705460 - 43705507
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43705460 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 43705507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 47810261 - 47810214
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  47810261 aggcttaatacatgttttggtcccttaacttatttttgaattacattt 47810214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 18668758 - 18668804
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  18668758 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 18668804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 35088083 - 35088037
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  35088083 ggcttaatacatgttttggtcccttaacttatttttgaattttattt 35088037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 43704603 - 43704649
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43704603 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 43704649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 21171289 - 21171333
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  21171289 aggcttaatacatgctttggtcccttaacttatttttgaatttca 21171333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 48755667 - 48755623
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  48755667 cttaatacatgctttggtcccttaacttatttttgaatttcattt 48755623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 6772722 - 6772769
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  6772722 aggcttaatacatgctttggtcccttaacttatttttgaattccattt 6772769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 6773512 - 6773465
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  6773512 aggcttaatacatactttggtcccttaacttatttttgaatttcattt 6773465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 8439760 - 8439807
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||    
T  8439760 aggcttaatacatgctttgatcccttaacttatttttgaatttcattt 8439807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 29754808 - 29754761
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  29754808 aggcttaatatatgctttggtcccttaacttatttttgaatttcattt 29754761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 32610928 - 32610885
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  32610928 ttaatacatgttttggtcccttgacttatttttgaatttcattt 32610885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 33341292 - 33341339
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  33341292 aggcttaatacatgatttggtctcttaacttatttttggattttattt 33341339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 37725877 - 37725920
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  37725877 ttaatacatgctttggtcccttaacttatttttgaatttcattt 37725920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 40501577 - 40501530
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  40501577 aggcttaatacatgctttagtcccttaacttatttttgaatttcattt 40501530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 47809484 - 47809531
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  47809484 aggcttaatacatgctttggtcccttaatttatttttgaatttcattt 47809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 1884235 - 1884281
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  1884235 ggcttaatacatgctttggtcccttaacttatttttgaattttattt 1884281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 7345909 - 7345955
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  7345909 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 7345955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 38778972 - 38779018
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  38778972 ggcttaatacatgctttggtcccttaacatatttttgaatttcattt 38779018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 5039541 - 5039582
Alignment:
Q  20 tggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  5039541 tggaaggagctccttgccactggagcccaaacaacttggttt 5039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 41618619 - 41618574
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||    
T  41618619 gcttaatacatgctttggtcccttaacttatttttggatttcattt 41618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 28648284 - 28648328
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||    
T  28648284 aggcttaatacatgttttggtcccttaacttaattttggatttca 28648328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19914823 - 19914866
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || ||||||||||| |||||||||||    
T  19914823 cttggaaggagctccttgccactggagcccaagcaacttggttt 19914866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 22268150 - 22268193
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  22268150 cttggaatgagctccttgccactggagcccaaacaacttggttt 22268193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 35087518 - 35087472
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  35087518 aggcttaatacatgctttggtc-ctcaacttatttttgaatttcattt 35087472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 35480202 - 35480249
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  35480202 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 35480249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 37375212 - 37375169
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| || ||||||||||||||||||||||    
T  37375212 ttaatacatgctttggtccctcaacttatttttgaatttcattt 37375169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 38001502 - 38001545
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||    
T  38001502 ttaatacatgctttggtcccttaacttattttcgaatttcattt 38001545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 14537853 - 14537811
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||  ||| |||||||||||||||||||||    
T  14537853 ttggaaggagctccttgtcgcgggagcccaaacaacttggttt 14537811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 19278348 - 19278394
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||||    
T  19278348 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 19278394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 27875208 - 27875250
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  27875208 cttggaaggagctacttgccactggagcccaaacaacttggtt 27875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 33229654 - 33229608
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  33229654 ggcttaatacatgctttggttccttaatttatttttgaatttcattt 33229608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 34659212 - 34659174
Alignment:
Q  20 tggaaggagctccttaccgctggagcccaaacaacttgg 58  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  34659212 tggaaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 36702772 - 36702818
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||||    
T  36702772 ggcttaatacatgctttggtcccttaacttatttttagatttcattt 36702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 38002635 - 38002601
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttt 277  Q
    ||||||||||||| |||||||||||||||||||||    
T  38002635 ggcttaatacatgctttggtctcttaacttatttt 38002601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 41616619 - 41616665
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  41616619 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 41616665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 43862094 - 43862136
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||| ||||||||| ||||| ||||||||||||||||||||    
T  43862094 ttggaaagagctccttgccgctagagcccaaacaacttggttt 43862136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 43925500 - 43925458
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  43925500 cttggaaggagctccttgccactggagcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 48804671 - 48804629
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  48804671 cttggaaggagctccttgccactggagcccaagcaacttggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 39474926 - 39474881
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtttgat 64  Q
    |||||| |||||||||||| || ||| |||||||||||||||||||    
T  39474926 ttggaaagagctccttaccactagagtccaaacaacttggtttgat 39474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 43346901 - 43346942
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||| || |||||| |||||||||||||||    
T  43346901 ttggaaggagctccttgccactggagtccaaacaacttggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 1904138 - 1904098
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  1904138 ttaatacatgctttggtcccttaacttatttttggatttca 1904098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 9685727 - 9685691
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaac 54  Q
    ||||||||||||||||| || ||||||||||||||||    
T  9685727 cttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 21171604 - 21171564
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  21171604 ttaatacatgctttggtcccttaacttatttttggatttca 21171564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 30224095 - 30224051
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| ||||||||||||| | |||||||||    
T  30224095 cttaatacatgctttggtcccttaacttattttcggatttcattt 30224051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 34558420 - 34558376
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| ||||||||||||| | |||||||||    
T  34558420 cttaatacatgctttggtcccttaacttattttcggatttcattt 34558376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 43935182 - 43935226
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||| ||| ||||||| ||||||||||||||| |||||||||    
T  43935182 cttaatatatgctttggtcccttaacttatttttggatttcattt 43935226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 15816788 - 15816741
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15816788 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 15816741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 27264695 - 27264648
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  27264695 aggcttaatacatgctttggtctcttaacttatttttgaatttcattt 27264648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 5564053 - 5564100
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5564053 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 5564100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 5565267 - 5565220
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5565267 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 5565220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 14482213 - 14482166
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  14482213 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 14482166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 17859388 - 17859341
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  17859388 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 17859341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 43015533 - 43015580
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43015533 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 43015580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 10477632 - 10477586
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  10477632 ggcttaatacatgttttggtcccttaacttatttttgaattttattt 10477586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 15808075 - 15808121
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||    
T  15808075 ggcttaattcatgttttggtcccttaacttatttttgaatttcattt 15808121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 21545190 - 21545144
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  21545190 ggcttaatacatgttttggtcccttaacttatttttggatttcattt 21545144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 6706920 - 6706967
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  6706920 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 6706967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 17179372 - 17179329
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  17179372 ggcttaatacatgctttggtcccttaacttatttttgaatttca 17179329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 17858706 - 17858659
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  17858706 aggcctaatacatgatttggtcccttaacttatttttgaatttcattt 17858659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 27262707 - 27262754
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  27262707 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 27262754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 15268376 - 15268422
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  15268376 ggcttaatacatgctttggtctcttaacttatttttggatttgattt 15268422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 17179054 - 17179096
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  17179054 aggcttaatacatgctttggtcccttaacttatttttgaattt 17179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 21180435 - 21180477
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  21180435 cttggaaggagctccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 38005387 - 38005345
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  38005387 cttggaaggagctccttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 41313388 - 41313342
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  41313388 ggcttaatacatgttttggtcccttaacttattttcgaattttattt 41313342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 286
Target Start/End: Original strand, 30202690 - 30202731
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  30202690 cttaatacatgctttggtcccttaacttatttttgaatttca 30202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 42772434 - 42772479
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||    
T  42772434 gcttaatacatgctttggttccttaacttatttttgaatttcattt 42772479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 30203001 - 30202961
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  30203001 ttaatacatgttttggtcccttaacttatttttggatttca 30202961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 3254850 - 3254897
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  3254850 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 3254897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 3665218 - 3665265
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  3665218 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 3665265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 7038454 - 7038407
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| ||||||||||||||| |||||||||    
T  7038454 aggcttaatacatcatttggtcccttaacttatttttggatttcattt 7038407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 11391866 - 11391913
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || ||||| |||||||||||||||||||    
T  11391866 aggcttaatacatgctttgatcccttaatttatttttgaatttcattt 11391913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 11392078 - 11392031
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  |||| || |||||||||||||||||||||||||    
T  11392078 aggcttaatacatactttgatcccttaacttatttttgaatttcattt 11392031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 11408527 - 11408574
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || ||||| |||||||||||||||||||    
T  11408527 aggcttaatacatgctttgatcccttaatttatttttgaatttcattt 11408574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 11408739 - 11408692
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  |||| || |||||||||||||||||||||||||    
T  11408739 aggcttaatacatactttgatcccttaacttatttttgaatttcattt 11408692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 17858452 - 17858495
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttc 285  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||    
T  17858452 aggcttaatacatgctttggtcccttaatttatttttgaatttc 17858495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 21541055 - 21541102
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||| ||||||| |||||||||    
T  21541055 aggcttaatacatgctttggtcccttaactaatttttggatttcattt 21541102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 26805299 - 26805256
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  26805299 cttggaaggagttccttgccgctggagcccaaacaacttagttt 26805256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 33837877 - 33837842
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttt 277  Q
    |||||||||||||||||||||| |||||||||||||    
T  33837877 aggcttaatacatgttttggtcccttaacttatttt 33837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 37560158 - 37560119
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttg 57  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  37560158 cttggaaggagcttcttaccactggagcccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 41295099 - 41295146
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||  |||||||||||||| |||||||||    
T  41295099 aggcttaatacatgctttggtcatttaacttatttttggatttcattt 41295146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 42027187 - 42027234
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| |||||||||||||||| ||||||||    
T  42027187 aggcttaatacatcgtttggtcccttaacttatttttgattttcattt 42027234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 7747259 - 7747217
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  7747259 cttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 8410116 - 8410074
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  8410116 cttggaaggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 12852881 - 12852927
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||| ||||| |||||||||    
T  12852881 ggcttaatacatgctttggtcccttaacttacttttggatttcattt 12852927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 12854225 - 12854179
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||  |||||||||    
T  12854225 ggcttaatacatgctttggtcccttaacttatttttagatttcattt 12854179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 14573929 - 14573883
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||| |||||||| |||||||||    
T  14573929 ggcttaatacatgctttggtcccttaacatatttttggatttcattt 14573883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 18902651 - 18902693
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  18902651 cttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 20612657 - 20612699
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  20612657 cttggaaggagctccttgccactggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 42368428 - 42368383
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  42368428 ggcttaatacatgatttggtc-cttaacttatttttggatttcattt 42368383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 2305536 - 2305581
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| |||| || ||||||||||||||| |||||||||    
T  2305536 gcttaatacatgctttgatcccttaacttatttttggatttcattt 2305581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 2528462 - 2528507
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttga 63  Q
    |||||||||||||| || || ||||||||||||||| |||||||||    
T  2528462 cttggaaggagctcattgccactggagcccaaacaatttggtttga 2528507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 12864208 - 12864167
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  12864208 ttggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 23500803 - 23500844
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  23500803 ttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 43019366 - 43019321
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| |||| |  |||||||||||||||||||||||||    
T  43019366 gcttaatacatgctttgattccttaacttatttttgaatttcattt 43019321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 289
Target Start/End: Original strand, 10477351 - 10477383
Alignment:
Q  257 tttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||||| |||||||||    
T  10477351 tttggtctcttaacttatttttggatttcattt 10477383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 20948396 - 20948440
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||  | ||||| ||||||||||||||||||||||    
T  20948396 aggcttaatacatactatggtcccttaacttatttttgaatttca 20948440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 27115574 - 27115527
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27115574 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 27115527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 47512206 - 47512159
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47512206 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 47512159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 31860580 - 31860533
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  31860580 aggcttaatacatgttttggtcccttaacttatttttgaatttcattt 31860533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 4387989 - 4388034
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  4387989 gcttaatacatgctttggtctcttaacttatttttgaatttcattt 4388034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 25866794 - 25866747
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  25866794 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 25866747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 50678360 - 50678407
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  50678360 aggcttaatacatgatttggtcccttaacttatttttgaatttcattt 50678407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 51760033 - 51760080
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  51760033 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 51760080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 52370978 - 52371024
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  52370978 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 52371024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 33418238 - 33418283
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtttgat 64  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  33418238 ttggaaggagctccttgccactggagcccaaacaacttggtttgat 33418283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 1061574 - 1061527
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||    
T  1061574 aggcttaatacatgctttgctctcttaacttatttttggatttcattt 1061527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 3978038 - 3978085
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  3978038 aggcttaatacatcatttggtcccttaacttatttttgaatttcattt 3978085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 14390252 - 14390299
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  14390252 aggcttaatacatgctttggtcccttaacttattttttaatttcattt 14390299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 20953282 - 20953329
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  20953282 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 20953329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 25866202 - 25866155
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  25866202 aggcttaatacatgctttggtcccttaaattatttttgaatttcattt 25866155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 28309756 - 28309803
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  28309756 aggcttaatacatgctttggtcccttaacttattttttaatttcattt 28309803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 29001244 - 29001197
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  29001244 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 29001197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 33941311 - 33941358
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  33941311 aggcttaatacatgctttggtcccttaacttatttttgaattttattt 33941358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 42244502 - 42244545
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  42244502 ttaatacatgttttggtcccttaacttatttttggatttcattt 42244545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 52371231 - 52371184
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||  |||||||||||||||||||||||||    
T  52371231 aggcttaatacatgctttggttccttaacttatttttgaatttcattt 52371184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 52371902 - 52371859
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  52371902 ttaatacatgctttggtcccttaacttatttttgaatttcattt 52371859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 5855508 - 5855466
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  5855508 cttggaaggagctccttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 27690750 - 27690704
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  27690750 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 27690704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 30548491 - 30548537
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  30548491 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 30548537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 31859590 - 31859632
Alignment:
Q  247 taatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  31859590 taatacatgttttggtcacttaacttatttttggatttcattt 31859632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 37694648 - 37694694
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||    
T  37694648 ggcttaatacatgttttggtccctcaacttatttttaaatttcattt 37694694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 47511362 - 47511408
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  47511362 ggcttaatatatgctttggtcccttaacttatttttgaatttcattt 47511408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 9575353 - 9575312
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatt 283  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  9575353 aggcttaatacatgctttgatctcttaacttatttttgaatt 9575312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 25035356 - 25035396
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  25035356 ttaatacatgctttggtcccttaacttatttttgaatttca 25035396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 25040569 - 25040609
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  25040569 ttaatacatgctttggtcccttaacttatttttgaatttca 25040609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 2236807 - 2236854
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  2236807 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 2236854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 2238100 - 2238053
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  2238100 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 2238053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 13567160 - 13567207
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||| |||||||||||||||||  |||||||||||||| |||||||||    
T  13567160 aggcataatacatgttttggtcctttaacttatttttggatttcattt 13567207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 14312769 - 14312816
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  14312769 aggcttaatacatgatttggtcccttaacttatttttggattttattt 14312816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 20170808 - 20170761
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||| ||||||| || ||||||||||||||||||||||    
T  20170808 aggcttaatatatgctttggtccctcaacttatttttgaatttcattt 20170761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 20171284 - 20171237
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  20171284 aggcttaatacatgctttggtcctttaacttatttttgaattttattt 20171237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 27114931 - 27114884
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| || ||||||||||||||||||||||    
T  27114931 aggcttaatacatactttggtccctcaacttatttttgaatttcattt 27114884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 28999834 - 28999881
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||  |||||||||||||||||||||||||    
T  28999834 aggcttaatacatcctttggttccttaacttatttttgaatttcattt 28999881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 32824256 - 32824209
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| || ||||||||||||||||||||||    
T  32824256 aggcttaatacatactttggtccctcaacttatttttgaatttcattt 32824209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 46280893 - 46280846
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  46280893 aggcttaatacatgctttggtcctttaacttatttttgaattttattt 46280846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 47511952 - 47511999
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||| ||||    
T  47511952 aggcttaatacatgctttggtccctcaacttatttttgaattttattt 47511999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 48974528 - 48974481
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  48974528 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 48974481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 284
Target Start/End: Original strand, 1898002 - 1898040
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  1898002 ttaatacatgctttggtcccttaacttatttttgaattt 1898040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 4388150 - 4388112
Alignment:
Q  251 acatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  4388150 acatgctttggtcccttaacttatttttgaatttcattt 4388112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 11398010 - 11398052
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  11398010 cttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 25865949 - 25865995
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||| |||| || |||||||||||||||||||||||||    
T  25865949 ggcttaatatatgctttgatcccttaacttatttttgaatttcattt 25865995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 32151044 - 32151082
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaactt 56  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  32151044 cttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 32823453 - 32823499
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  32823453 ggcttaatatatgctttggtcccttaacttatttttgaattttattt 32823499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 33850297 - 33850343
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  33850297 ggcttaatacatgctttggtcccttaacttatttttggattttattt 33850343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 33943681 - 33943635
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  33943681 ggcttaatacatgctttggtcccttaacttatttttggattttattt 33943635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 35683050 - 35683096
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  35683050 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 35683096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 51424246 - 51424292
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| | ||||||| ||||||||||||||| |||||||||    
T  51424246 ggcttaatacaagctttggtcccttaacttatttttggatttcattt 51424292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 51760793 - 51760747
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||  ||||||| || ||||||||||||||||||||||    
T  51760793 ggcttaatacatactttggtccctcaacttatttttgaatttcattt 51760747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 8763977 - 8763932
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttga 63  Q
    ||||||||||||||||| || | ||||||||| |||||||||||||    
T  8763977 cttggaaggagctccttgccacgggagcccaagcaacttggtttga 8763932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 10422773 - 10422732
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||| || ||| ||||||||||||||||||    
T  10422773 ttggaaggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 12036866 - 12036911
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttga 63  Q
    ||||||||||||| ||| || | |||||||||||||||||||||||    
T  12036866 cttggaaggagcttcttgccaccggagcccaaacaacttggtttga 12036911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 17642128 - 17642169
Alignment:
Q  20 tggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||||||||||||  | |||||||||||||||||||||||    
T  17642128 tggaaggagctccttgtcactggagcccaaacaacttggttt 17642169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 41663982 - 41664019
Alignment:
Q  22 gaaggagctccttaccgctggagcccaaacaacttggt 59  Q
    ||||||||||||| || |||||||||||||||||||||    
T  41663982 gaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 48798193 - 48798234
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||| || ||||||||| ||||||||||||    
T  48798193 ttggaaggagctccttgccactggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 15238228 - 15238272
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttg 62  Q
    ||||||||||||||||| ||  |||||||||| ||||||||||||    
T  15238228 cttggaaggagctccttgccattggagcccaagcaacttggtttg 15238272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 26056266 - 26056222
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||  ||||||| ||||||||||||||| |||||||||    
T  26056266 cttaatacatactttggtcccttaacttatttttggatttcattt 26056222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 27114680 - 27114724
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| || ||||||||||||||||| ||||    
T  27114680 cttaatacatgctttggtccctcaacttatttttgaattttattt 27114724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31152702 - 31152658
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttg 62  Q
    ||||||| ||||||||| || || |||||||||||||||||||||    
T  31152702 cttggaaagagctccttgccactagagcccaaacaacttggtttg 31152658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 38458084 - 38458124
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  38458084 ttaatacatgctttggtcccttaacttatttttggatttca 38458124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 39193578 - 39193622
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  39193578 cttaatacatgatttggtcccttaacttattttttaattttattt 39193622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 32780204 - 32780157
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  32780204 aggcttaatacatgttttggtcccttaacttatttttgaatttcattt 32780157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 6914934 - 6914887
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6914934 aggcttaatacatgatttggtcccttaacttatttttgaatttcattt 6914887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 8705850 - 8705893
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  8705850 ggcttaatacatgttttggtttcttaacttatttttgaatttca 8705893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 5062307 - 5062261
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5062307 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 5062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 7345511 - 7345465
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| || |||||||||||||||||||||||||    
T  7345511 ggcttaatacatgttttgatcccttaacttatttttgaatttcattt 7345465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 28237014 - 28236968
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28237014 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 28236968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 41163580 - 41163625
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttga 63  Q
    ||||||||||||||||| || |||||||||||||||||||||||||    
T  41163580 cttggaaggagctccttgccactggagcccaaacaacttggtttga 41163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 2472549 - 2472505
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  2472549 cttaatacatgctttggtcccttaacttatttttgaatttcattt 2472505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 16802408 - 16802364
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  16802408 cttaatacatgctttggtcccttaacttatttttgaatttcattt 16802364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 32411958 - 32412002
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  32411958 aggcttaatacatgttttggtcccttaacttatttttggatttca 32412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 1982706 - 1982753
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  1982706 aggcttaatacatgctttggtcccttaacttatttttgaattttattt 1982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 2472324 - 2472371
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||    
T  2472324 aggcttaatacatgctttgctcccttaacttatttttgaatttcattt 2472371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 3076818 - 3076861
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  3076818 ggcttaatacatgctttggtcccttaacttatttttgaatttca 3076861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 5061022 - 5061069
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  5061022 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 5061069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 6914709 - 6914756
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||||    
T  6914709 aggcttagtacatgctttggtcccttaacttatttttgaatttcattt 6914756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 12938004 - 12937957
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||    
T  12938004 aggcttaatacatgctttgatcccttaacttatttttgaatttcattt 12937957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 12952155 - 12952108
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||    
T  12952155 aggcttaatacatgctttgatcccttaacttatttttgaatttcattt 12952108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 12952852 - 12952809
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  12952852 ttaatacatgttttggtcccttaacttatttttaaatttcattt 12952809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 18693696 - 18693739
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  18693696 ttaatacatgttttggtcccttaacttatttttgaattttattt 18693739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 19050744 - 19050787
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  19050744 ggcttaatacatgttttggtcccttaacttatttttggatttca 19050787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 21306585 - 21306632
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||    
T  21306585 aggcttaatacatgctttgatcccttaacttatttttgaatttcattt 21306632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 21314423 - 21314470
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||    
T  21314423 aggcttaatacatgctttgatcccttaacttatttttgaatttcattt 21314470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 21387631 - 21387678
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| | ||||||| |||||||||||||||||||||||||    
T  21387631 aggcttaatacaagctttggtcccttaacttatttttgaatttcattt 21387678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 37371055 - 37371098
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  37371055 ttaatacatgctttggtcccttaacttatttttgaatttcattt 37371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 37380421 - 37380374
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  37380421 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 37380374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 15153871 - 15153913
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||||||| ||||||| ||||||||||||||||||||    
T  15153871 aggcttaatacatgctttggtcccttaacttatttttgaattt 15153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 16802196 - 16802242
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| || |||| |||||||||||||||||||||||||    
T  16802196 ggcttaatacatgcttgggtcccttaacttatttttgaatttcattt 16802242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 20988685 - 20988731
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  20988685 ggcttaatacatgctttggtcccttaacttattttcgaatttcattt 20988731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 23383634 - 23383592
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  23383634 cttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 26077127 - 26077085
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  26077127 cttggaatgagctccttaccactggagcccaaacaacttggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 38394825 - 38394783
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||| ||||||||||| ||||||||||||||||||||    
T  38394825 aggcttaatatatgttttggtcccttaacttatttttgaattt 38394783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 18136402 - 18136443
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  18136402 ttggaaggagctccttgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 1982957 - 1982913
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  1982957 cttaatacatgctttggtcccttaacttattttttaatttcattt 1982913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5732041 - 5732085
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttg 62  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||    
T  5732041 cttggaaggagctccttgccactggagcccaagcaacttggtttg 5732085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 19051057 - 19051017
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  19051057 ttaatacatgctttggtcccttaacttatttttgaatttca 19051017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 1538414 - 1538375
Alignment:
Q  21 ggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  1538414 ggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 4568096 - 4568049
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  4568096 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 4568049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 9812858 - 9812815
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || |||||| ||||||||||||||||    
T  9812858 cttggaaggagctccttgccactggagtccaaacaacttggttt 9812815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12705000 - 12704957
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || |||||| ||||||||||||||||    
T  12705000 cttggaaggagctccttgccactggagtccaaacaacttggttt 12704957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 15510385 - 15510338
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  15510385 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 15510338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 20991771 - 20991724
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||| || ||||||||||||| | |||||||||    
T  20991771 aggcttaatacatgttttgatcccttaacttattttcggatttcattt 20991724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 21389263 - 21389216
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||  ||||||||    
T  21389263 aggcttaatacatgctttggtcccttaacttatttttggttttcattt 21389216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 28857114 - 28857071
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || ||||||||||| |||||||||||    
T  28857114 cttggaaggagctccttgccactggagcccaagcaacttggttt 28857071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 30349565 - 30349522
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||||||| |||||| || |||||||||||||||||||||||    
T  30349565 cttggaaggaactccttgccactggagcccaaacaacttggttt 30349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 39728373 - 39728330
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  39728373 cttggaaagagctccttgccactggagcccaaacaacttggttt 39728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 6767172 - 6767214
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  6767172 cttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 19572710 - 19572668
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  19572710 cttggaaggagctccttgccactggagcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 25950707 - 25950741
Alignment:
Q  22 gaaggagctccttaccgctggagcccaaacaactt 56  Q
    |||||||||||||||| ||||||||||||||||||    
T  25950707 gaaggagctccttaccactggagcccaaacaactt 25950741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 28856963 - 28856921
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  28856963 cttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 35403633 - 35403675
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||| ||||||    
T  35403633 cttggaaggagctccttgccactggagcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 12937785 - 12937830
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  12937785 gcttaatacatgctttggtcccttaacttattttttaattttattt 12937830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 24805285 - 24805322
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttg 279  Q
    |||||||||||||  |||||||||||||||||||||||    
T  24805285 aggcttaatacatcatttggtctcttaacttatttttg 24805322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 38297089 - 38297130
Alignment:
Q  22 gaaggagctccttaccgctggagcccaaacaacttggtttga 63  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  38297089 gaaggagctccttgccactggagcccaaacaatttggtttga 38297130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 641688 - 641728
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  641688 ttaatacatactttggtcccttaacttatttttgaatttca 641728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 3077102 - 3077062
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||| ||| ||||||| ||||||||||||||||||||||    
T  3077102 ttaatatatgatttggtcccttaacttatttttgaatttca 3077062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 10085963 - 10085923
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  10085963 ttaatacatcatttggtcccttaacttatttttgaatttca 10085923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 15613502 - 15613546
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| |||| || ||||||||||||||| |||||||||    
T  15613502 cttaatacatgctttgatcccttaacttatttttggatttcattt 15613546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 20525824 - 20525780
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttg 62  Q
    |||| |||||||||||| || ||||||||||| ||||||||||||    
T  20525824 cttgaaaggagctccttgccactggagcccaagcaacttggtttg 20525780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 21306835 - 21306792
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||    
T  21306835 cttaatgcatgctttggtc-cttaacttatttttgaatttcattt 21306792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 21314673 - 21314630
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||| |||| ||||||| |||||||||||||||||||||||||    
T  21314673 cttaatgcatgctttggtc-cttaacttatttttgaatttcattt 21314630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 26202508 - 26202461
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  26202508 aggcttaatacatgttttggtcccttaacttatttttgaatttcattt 26202461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 53177140 - 53177096
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  53177140 aggcttaatacatgttttggtcccttaacttatttttgaatttca 53177096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 26791546 - 26791499
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||    
T  26791546 aggcttaatacatgttttggtctcttaacttatttttggattttattt 26791499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 30441603 - 30441647
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||    
T  30441603 aggcttaatacatgttttagtcccttaacttatttttgaatttca 30441647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 12396996 - 12396949
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||    
T  12396996 aggcttaatacatgttttggtcccttaacttattttcggatttcattt 12396949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 15446792 - 15446745
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  15446792 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 15446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 23202234 - 23202281
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  23202234 aggcttaatacatgctttggtcccttaatttatttttgaatttcattt 23202281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 23202830 - 23202877
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  23202830 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 23202877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 23203080 - 23203037
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  23203080 ttaatacatgctttggtcccttaacttatttttgaatttcattt 23203037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 26428651 - 26428694
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||    
T  26428651 ggcttaatacatgctttggtcccttaacttatttttgaatttca 26428694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 28189419 - 28189372
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  28189419 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 28189372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 28509995 - 28509948
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  28509995 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 28509948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 56297801 - 56297754
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| || |||| |||||||||||||||||||||||||    
T  56297801 aggcttaatacatgcttgggtcccttaacttatttttgaatttcattt 56297754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 15317697 - 15317743
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  15317697 ggcttaacacatgctttggtcccttaacttatttttgaatttcattt 15317743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 15445431 - 15445477
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  15445431 ggcttaatacatgctttggtcccttaacttatttttggatttcattt 15445477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 30670989 - 30671035
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||    
T  30670989 ggcttaatatatgttttggtctcttaacttattttcggatttcattt 30671035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 38075423 - 38075381
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  38075423 cttggaaggaactccttgccgctggagcccaaacaacttggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 3574567 - 3574611
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttg 62  Q
    ||||||||||||||||| || ||||||||||| ||||||||||||    
T  3574567 cttggaaggagctccttgccactggagcccaagcaacttggtttg 3574611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 8516974 - 8516930
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||    
T  8516974 aggcttaatacatactttggtcccttaacttatttttgaatttca 8516930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 26428963 - 26428923
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  26428963 ttaatacatgttttgctcccttaacttatttttgaatttca 26428923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1940895 - 1940938
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || || ||||||||||||||||||||    
T  1940895 cttggaaggagctccttgccactagagcccaaacaacttggttt 1940938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 2310900 - 2310857
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| ||||||||||||| |||||||||||    
T  2310900 ttaatacatgctttggtcccttaacttattttcgaatttcattt 2310857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2559297 - 2559254
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||||||||||| || || |||||||||||||||||||||||    
T  2559297 cttggaaggagctcgttgccactggagcccaaacaacttggttt 2559254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 26480069 - 26480112
Alignment:
Q  17 acttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||||| ||  |||||||||||||||||||||    
T  26480069 acttggaaggagctccttgccagtggagcccaaacaacttggtt 26480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 247 - 286
Target Start/End: Original strand, 28370461 - 28370500
Alignment:
Q  247 taatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  28370461 taatacatgttttggtcccttaatttatttttgaatttca 28370500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 29833366 - 29833413
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  29833366 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 29833413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 30672186 - 30672139
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  30672186 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 30672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 31711086 - 31711133
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| ||||||||||||||| |||||||||    
T  31711086 aggcttaatacatcatttggtcccttaacttatttttggatttcattt 31711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 36644987 - 36644940
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || || ||||||||||||||||||||||    
T  36644987 aggcttaatacatgctttgatccctcaacttatttttgaatttcattt 36644940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 38166017 - 38165974
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  38166017 cttggaaggagctccttgccagtggagcccaaacaacttggttt 38165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 52658906 - 52658941
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttattttt 278  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52658906 ggcttaatacatgttttggtcccttaacttattttt 52658941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 53401573 - 53401526
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  53401573 aggcttaatacatgctttggtcccttaacttatttttggattttattt 53401526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 55921024 - 55920981
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || ||||||||||| |||||||||||    
T  55921024 cttggaaggagctccttgccactggagcccaagcaacttggttt 55920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 56000281 - 56000328
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || |||||||||||||||| ||||||||    
T  56000281 aggcttaatacatgctttgatcccttaacttatttttgattttcattt 56000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 1446816 - 1446774
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  1446816 cttggaaggagctccttgccactggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 6779201 - 6779159
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||| |||||||| || ||||||||||||||||||||||    
T  6779201 cttggaagaagctccttgccactggagcccaaacaacttggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 8889008 - 8888970
Alignment:
Q  22 gaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  8889008 gaaggagctccttgccgctagagcccaaacaacttggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 19651566 - 19651608
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  19651566 cttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 24166440 - 24166398
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  24166440 cttggaaggagctccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 29834553 - 29834507
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  29834553 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 29834507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 29895777 - 29895735
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  29895777 cttggaaggagctccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 32509086 - 32509040
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||  | || |||||||||||||||||||    
T  32509086 ggcttaatacatgttttggtccttcaatttatttttgaatttcattt 32509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 34457689 - 34457643
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||||||||||| ||||| |||||||||||||| ||||    
T  34457689 ggcttaatatatgttttggtcccttaatttatttttgaattttattt 34457643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 34667723 - 34667765
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || || |||||||||||||||||||    
T  34667723 cttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 41339516 - 41339558
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || || |||||||||||||||||||    
T  41339516 cttggaaggagctccttgccactagagcccaaacaacttggtt 41339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 52950072 - 52950030
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || || |||||||||||||||||||    
T  52950072 cttggaaggagctccttgccactagagcccaaacaacttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 53599050 - 53599008
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| ||  |||||||||||||||||||||    
T  53599050 cttggaaggagctccttgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 56001389 - 56001343
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||| | ||||||||    
T  56001389 ggcttaatacatgctttggtcccttaacttattttttattttcattt 56001343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 15317949 - 15317908
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatt 283  Q
    |||||||||||||| ||||||| || ||||||||||||||||    
T  15317949 aggcttaatacatgctttggtccctcaacttatttttgaatt 15317908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 33376212 - 33376249
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttg 279  Q
    |||||||||||||  |||||||||||||||||||||||    
T  33376212 aggcttaatacatcatttggtctcttaacttatttttg 33376249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 3217731 - 3217687
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||  |||| || ||||||||||||||||||||||    
T  3217731 aggcttaatacattctttgatcccttaacttatttttgaatttca 3217687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 3528191 - 3528227
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttattttt 278  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  3528191 aggcttaatacatgctttggtcccttaacttattttt 3528227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 13552104 - 13552068
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaac 54  Q
    ||||||||||||||||| || ||||||||||||||||    
T  13552104 cttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 14077932 - 14077892
Alignment:
Q  22 gaaggagctccttaccgctggagcccaaacaacttggtttg 62  Q
    ||||||||||||| ||||| ||| |||||||||||||||||    
T  14077932 gaaggagctccttgccgctagagtccaaacaacttggtttg 14077892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Original strand, 19048898 - 19048942
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||| ||||||| ||||| ||||||||| ||||||    
T  19048898 aggcttaatacatgctttggtcccttaatttatttttggatttca 19048942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Original strand, 23752014 - 23752046
Alignment:
Q  246 ttaatacatgttttggtctcttaacttattttt 278  Q
    |||||||||||||||||| ||||||||||||||    
T  23752014 ttaatacatgttttggtcccttaacttattttt 23752046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 28370759 - 28370719
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||| ||||||| ||||||||||||||| ||||||    
T  28370759 ttaatacatgctttggtcccttaacttatttttggatttca 28370719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 33377486 - 33377442
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||  ||||||| |||||||||||||||| |||||    
T  33377486 aggcttaatacatcatttggtcccttaacttatttttgattttca 33377442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 44690978 - 44690930
Alignment:
Q  242 aggcttaatacatg-ttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||| ||||||||||||| | |||||||||    
T  44690978 aggcttaatacatgcttttggtcccttaacttattttcggatttcattt 44690930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 19283728 - 19283775
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  19283728 aggcttaatacatgttttggtcccttaacttatttttgaatttcattt 19283775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 51213445 - 51213492
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  51213445 aggcttaatacatgctttggtctcttaacttatttttgaatttcattt 51213492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 12106628 - 12106582
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  12106628 ggcttaatacatgctttggtctcttaacttatttttgaatttcattt 12106582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 7575600 - 7575553
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  7575600 aggcttaatacatgttttggttccttaacttatttttgaatttcattt 7575553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 11220780 - 11220733
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  11220780 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 11220733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 12105353 - 12105400
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  12105353 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 12105400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 13041941 - 13041988
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  13041941 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 13041988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 13050018 - 13050065
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  13050018 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 13050065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 33563943 - 33563990
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  33563943 aggcttaatacatgttttggtcccttaacttatttttggatttcattt 33563990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 46987319 - 46987366
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  46987319 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 46987366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 51213699 - 51213652
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||    
T  51213699 aggcttaatacatgttttagtcccttaacttatttttgaatttcattt 51213652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 7583705 - 7583751
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  7583705 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 7583751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 7820385 - 7820431
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  7820385 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 7820431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 23886947 - 23886901
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23886947 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 23886901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 30431370 - 30431416
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  30431370 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 30431416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 44384417 - 44384371
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  44384417 ggcttaatatatgttttggtcccttaacttatttttgaatttcattt 44384371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 46988590 - 46988544
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  46988590 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 46988544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 51214287 - 51214241
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  51214287 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 51214241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 54109491 - 54109537
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  54109491 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 54109537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 12105605 - 12105560
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||    
T  12105605 gcttaatacatgctttggtcccttaacttatttttgaatttcattt 12105560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 46988340 - 46988385
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||    
T  46988340 gcttaatacatgctttggtcccttaacttatttttgaatttcattt 46988385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 5810247 - 5810203
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcat 287  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||    
T  5810247 ggcttaatacatgatttggtcccttaacttatttttgaatttcat 5810203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 383094 - 383047
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  383094 aggcttaatacatgctttggtcccttaacttatttttgaattttattt 383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 23886110 - 23886157
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| |||||||||||||||||||||||||    
T  23886110 aggcttaatacatactttggtcccttaacttatttttgaatttcattt 23886157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 23886694 - 23886741
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  23886694 aggcttaatacatgctttggtcccttaacttattttttaatttcattt 23886741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 30431949 - 30431996
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  30431949 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 30431996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 30432734 - 30432687
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  30432734 aggcttaatacatgttttggtcctttaacttatttttaaatttcattt 30432687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 47855460 - 47855413
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  47855460 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 47855413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 48825806 - 48825853
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  48825806 aggcttaatacatgttttggtcccttaacttattttcgaattttattt 48825853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 54261211 - 54261168
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || |||||||||||||||||||||||    
T  54261211 cttggaaggagctccttgccactggagcccaaacaacttggttt 54261168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 10855369 - 10855327
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  10855369 cttggaaggagctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 13893911 - 13893869
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  13893911 cttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 29536709 - 29536755
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  29536709 ggcttaatacatgttttggtcccttgacttatttttggatttcattt 29536755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 30838337 - 30838383
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||    
T  30838337 ggcttaatacatgttttggtccctcaacttatttttgaattttattt 30838383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 48342005 - 48341963
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  48342005 cttggaaggagctccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 249 - 286
Target Start/End: Original strand, 42570013 - 42570050
Alignment:
Q  249 atacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  42570013 atacatgttttggtcccttaacttatttttgaatttca 42570050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 51400209 - 51400246
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttg 279  Q
    |||||||||||||||||||||| |||||||||||||||    
T  51400209 aggcttaatacatgttttggtcccttaacttatttttg 51400246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 2225146 - 2225102
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||    
T  2225146 aggcttaatacatgctttggtcccttaacttatttttggatttca 2225102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 35633224 - 35633268
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||||    
T  35633224 cttaatacatgctttggtcccttaacttatttttggatttcattt 35633268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 13997252 - 13997299
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||  | ||||||||||||||||||||||    
T  13997252 aggcttaatacatgctttggtccttcaacttatttttgaatttcattt 13997299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 15320171 - 15320128
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || |||||| ||||||||||||||||    
T  15320171 cttggaaggagctccttgccactggagtccaaacaacttggttt 15320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 29762277 - 29762320
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || ||||||||||| |||||||||||    
T  29762277 cttggaaggagctccttgccactggagcccaagcaacttggttt 29762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 30838592 - 30838545
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  30838592 aggcttaatatatgatttggtcccttaacttatttttgaattttattt 30838545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 32873670 - 32873713
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  32873670 cttggaatgagctccttgccactggagcccaaacaacttggttt 32873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 32973133 - 32973180
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  32973133 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 32973180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 34901646 - 34901693
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || ||||||||||||||| |||||||||    
T  34901646 aggcttaatacatgctttgatcccttaacttatttttggatttcattt 34901693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 39288561 - 39288514
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  39288561 aggcttaatacatgctttggtcacttaacttattttcggatttcattt 39288514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 40502333 - 40502290
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  40502333 ttaatacatgttttggtcccttaacttatttttggattttattt 40502290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 46446363 - 46446410
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||||||||| ||||||| |||||| ||||    
T  46446363 aggcttaatacatgctttggtctcttaatttattttcgaattttattt 46446410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 52292588 - 52292635
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  52292588 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 52292635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 53047891 - 53047938
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  53047891 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 53047938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 53049159 - 53049124
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttt 277  Q
    |||||||||||||||||||||| |||||||||||||    
T  53049159 aggcttaatacatgttttggtcccttaacttatttt 53049124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 55443672 - 55443625
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||||    
T  55443672 aggcttaatacatactttggtcccttaacttattttcgaatttcattt 55443625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 381954 - 381996
Alignment:
Q  247 taatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||    
T  381954 taatacatgctttggtcccttaacttatttttggatttcattt 381996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 11687231 - 11687273
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||| ||| || ||||||||||||||||||||||    
T  11687231 cttggaaggagcttcttgccactggagcccaaacaacttggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 19283982 - 19283936
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  19283982 ggcttaatacatgctttggtcctttaacttatttttgaattttattt 19283936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 19579415 - 19579369
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  19579415 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 19579369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 20486008 - 20486054
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||| |||||| ||||||  |||||||||||||||||||||||||    
T  20486008 ggcttattacatgctttggtaccttaacttatttttgaatttcattt 20486054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 25294945 - 25294903
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  25294945 cttggaaggagctccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 26207923 - 26207965
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  26207923 cttggaaggagctccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 29127904 - 29127862
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||| |||||| || ||||||||||||||||||||||    
T  29127904 cttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 32974344 - 32974298
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  32974344 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 32974298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 35315941 - 35315899
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  35315941 cttggaaggagctctttgccactggagcccaaacaacttggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 45877439 - 45877397
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||| ||||||| || ||||||||||||||||||||||    
T  45877439 cttggaaggggctccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 46529992 - 46530034
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||| |||||||||||| || ||||||||||||||||||||||    
T  46529992 cttgaaaggagctccttgccactggagcccaaacaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 48035445 - 48035399
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  48035445 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 48035399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 54654087 - 54654041
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||  ||||||| ||||||||||||||| |||||||||    
T  54654087 ggcttaatacatcatttggtcccttaacttatttttggatttcattt 54654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 39849057 - 39849012
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtttga 63  Q
    ||||||||||||||||| || ||||||||||| | |||||||||||    
T  39849057 cttggaaggagctccttgccactggagcccaagcgacttggtttga 39849012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 51683077 - 51683118
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||  || ||||||||||||||||||||||    
T  51683077 ttggaaggagctcctcgccactggagcccaaacaacttggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 53347118 - 53347073
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||| ||||||||||||| | |||||||||    
T  53347118 gcttaatacatgctttggtcccttaacttattttcggatttcattt 53347073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 1301033 - 1301073
Alignment:
Q  249 atacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||| ||||||||||||| |||||| ||||    
T  1301033 atacatgttttggtcccttaacttattttcgaattttattt 1301073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Complemental strand, 5417167 - 5417123
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||| |||||||||| ||||||||||||| | |||||||||    
T  5417167 cttaatacgtgttttggtcccttaacttattttcggatttcattt 5417123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 26799027 - 26798991
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttg 279  Q
    ||||||||||||  |||||||||||||||||||||||    
T  26799027 ggcttaatacatcatttggtctcttaacttatttttg 26798991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 41630636 - 41630676
Alignment:
Q  20 tggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||||  | ||||||||||||||||||||||    
T  41630636 tggaaggagctccttgtcactggagcccaaacaacttggtt 41630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 42634008 - 42633964
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||  ||||||| |||||||||||||||| |||||    
T  42634008 aggcttaatacatcatttggtcccttaacttatttttgattttca 42633964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 19 - 66
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19 aggcttaatacatgatttggtcccttaacttatttttgaatttcattt 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 246 - 200
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||| ||||| ||||    
T  246 ggcttaatacatgatttggtcccttaacttatttttaaatttaattt 200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 28126 - 28173
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  28126 aggcttaatacatgttttggtccctcaacttatttttgaatttcattt 28173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 28380 - 28333
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  28380 aggcttaatacatgctttggtccctcaacttatttttgaatttcattt 28333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 3271892 - 3271939
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  3271892 aggcttaatacatgatttggtcccttaacttatttttgaatttcattt 3271939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 3272147 - 3272100
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  3272147 aggcttaatacatgtttaggtcccttaacttatttttgaatttcattt 3272100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Complemental strand, 15989392 - 15989349
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttc 285  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  15989392 aggcttaatacatgttttggtcccttaacttatttttgaatttc 15989349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 29441610 - 29441657
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29441610 aggcttaatacatgctttggtctcttaacttatttttgaattttattt 29441657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 30864577 - 30864530
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  30864577 aggcttaatacatgatttggtcccttaacttatttttgaatttcattt 30864530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 39349561 - 39349514
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||    
T  39349561 aggcttaatacatattttggtcccttaacttatttttgaatttcattt 39349514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 40102215 - 40102262
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  40102215 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 40102262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 3271155 - 3271201
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  3271155 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 3271201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 21551917 - 21551963
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21551917 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 21551963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 21552963 - 21553009
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21552963 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 21553009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 41178792 - 41178748
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||    
T  41178792 aggcttaatacatgctttggtcccttaacttatttttgaatttca 41178748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 45384237 - 45384281
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  45384237 cttaatacatgctttggtcccttaacttatttttgaatttcattt 45384281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6940547 - 6940504
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  6940547 cttggaatgagctccttaccactggagcccaaacaacttggttt 6940504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15884676 - 15884719
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  15884676 cttggaaggagctccttaccactggagcccaatcaacttggttt 15884719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 15988998 - 15989045
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  15988998 aggcttaatacatgctttggtcccttaacttatttttaaatttcattt 15989045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 40103060 - 40103013
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||| ||||||||| ||||||| |||||||||||||||||||||||||    
T  40103060 aggcctaatacatgctttggtcccttaacttatttttgaatttcattt 40103013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 45385916 - 45385869
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  45385916 aggcttaatacatgctttggtcccttaacttatttttggatttcattt 45385869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 44893399 - 44893441
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  44893399 cttggaaggagctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 24706332 - 24706287
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||||    
T  24706332 gcttaatacatgctttggtcccttaacttatttttggatttcattt 24706287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 15989141 - 15989185
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||    
T  15989141 cttaatatatgatttggtcccttaacttatttttgaatttcattt 15989185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 24837232 - 24837188
Alignment:
Q  17 acttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||||||||||||||| || ||||||||||| |||||||||||    
T  24837232 acttggaaggagctccttgccactggagcccaagcaacttggttt 24837188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2467239 - 2467282
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || ||||||||||| |||||||||||    
T  2467239 cttggaaggagctccttgccactggagcccaagcaacttggttt 2467282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 3237762 - 3237715
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||  ||||||| ||||||||||||||| |||||||||    
T  3237762 aggcttaatacatcatttggtcccttaacttatttttggatttcattt 3237715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 3612293 - 3612246
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||| ||| || ||||||||||||||||||||||    
T  3612293 aggcttaatacatgctttagtccctcaacttatttttgaatttcattt 3612246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 3612701 - 3612658
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||    
T  3612701 ttaatacatgctttggtcccttaacttatttttgaattttattt 3612658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 4676000 - 4675953
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || ||||||||||||||||| ||||    
T  4676000 aggcttaatacatgctttggtccctcaacttatttttgaattttattt 4675953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 7561794 - 7561837
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  7561794 ggcttaatacatgctttggtcccttaacttatttttggatttca 7561837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 8502078 - 8502121
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||||    
T  8502078 ggcttaatacatgctttggtcccttaatttatttttgaatttca 8502121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 21553576 - 21553623
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || || |||||||||||||||||||    
T  21553576 aggcttaatacatgctttggtccctcaatttatttttgaatttcattt 21553623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 21553826 - 21553783
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| || ||||||||||||||||||||||    
T  21553826 ttaatacatgctttggtccctcaacttatttttgaatttcattt 21553783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 24068324 - 24068371
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||  ||||||||    
T  24068324 aggcttaatacatgctttggtcccttaacttatttttggttttcattt 24068371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 30865247 - 30865200
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  30865247 aggcttaatatatgctttggtcctttaacttatttttgaatttcattt 30865200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 39515193 - 39515240
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||||||    
T  39515193 aggcttaatgcatgttttggtcccttaacttatttttggttttcattt 39515240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 40102467 - 40102420
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  40102467 aggcttaatacatgattttgtcccttagcttatttttgaatttcattt 40102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 6844694 - 6844648
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  6844694 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 6844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 7565408 - 7565366
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||    
T  7565408 aggcttaatacatgctttggtcccttaacttatttttggattt 7565366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 8141091 - 8141049
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||| |||||||| || ||||||||||||||||||||||    
T  8141091 cttggaagcagctccttgccactggagcccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 10535524 - 10535566
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || |||||| |||||||||||||||    
T  10535524 cttggaaggagctccttgccactggagtccaaacaacttggtt 10535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 13359010 - 13358968
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  13359010 ttggaaggagctccttaccactgaagcccaagcaacttggttt 13358968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 17845722 - 17845680
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||||||||||| || || ||||||||||||||||||||||    
T  17845722 cttggaaggagctcattgccactggagcccaaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 22810069 - 22810027
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || || |||||||||||||||||||    
T  22810069 cttggaaggagctccttgccactagagcccaaacaacttggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 24938683 - 24938725
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    |||||| |||||||||| || ||||||||||||||||||||||    
T  24938683 cttggagggagctccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 34846803 - 34846761
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||| ||||||||| || ||||||||||||||||||||||    
T  34846803 cttggaatgagctccttgccactggagcccaaacaacttggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 38922535 - 38922577
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  38922535 cttggaaggagctccttgccactggagcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 27975872 - 27975835
Alignment:
Q  26 gagctccttaccgctggagcccaaacaacttggtttga 63  Q
    |||||||||||| || ||||||||||||||||||||||    
T  27975872 gagctccttaccactagagcccaaacaacttggtttga 27975835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 28033141 - 28033104
Alignment:
Q  26 gagctccttaccgctggagcccaaacaacttggtttga 63  Q
    |||||||||||| || ||||||||||||||||||||||    
T  28033141 gagctccttaccactagagcccaaacaacttggtttga 28033104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 3237415 - 3237459
Alignment:
Q  246 ttaatacatgtttt-ggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||    
T  3237415 ttaatacatgtttttggtcccttaacttatttttggatttcattt 3237459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 13360350 - 13360394
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| ||||||||||||||  |||||||||    
T  13360350 cttaatacatgctttggtcccttaacttatttttagatttcattt 13360394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 19913490 - 19913530
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttca 19913530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 41178474 - 41178510
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttattttt 278  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  41178474 aggcttaatatatgttttggtcccttaacttattttt 41178510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 43275744 - 43275780
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttattttt 278  Q
    |||||||||||||  ||||||||||||||||||||||    
T  43275744 aggcttaatacatcatttggtctcttaacttattttt 43275780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 21749924 - 21749877
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21749924 aggcttaatacatgctttggtcccttaacttatttttgaatttcattt 21749877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 5999704 - 5999658
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5999704 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 5999658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 19655099 - 19655053
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19655099 ggcttaatacatgctttggtcccttaacttatttttgaatttcattt 19655053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 8224460 - 8224413
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  8224460 aggcttaatacatgctttggtcccttaacttaattttgaatttcattt 8224413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 11104499 - 11104452
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||||||  ||||||||||||||||||||||||    
T  11104499 aggcttaatacatgctttggtcctttaacttatttttgaatttcattt 11104452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 12202191 - 12202238
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  12202191 aggcttaatacatgctttcgtcccttaacttatttttgaatttcattt 12202238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 12202414 - 12202367
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  12202414 aggcttaatacatgctttggtcccttaacttattttttaatttcattt 12202367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 33328373 - 33328416
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| |||||||||||||||||||||||||    
T  33328373 ttaatacatgctttggtcccttaacttatttttgaatttcattt 33328416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 12203392 - 12203346
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  12203392 ggcttaatacatgctttagtcccttaacttatttttgaatttcattt 12203346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 14107480 - 14107522
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  14107480 ttggaaggagctccttgccactggagcccaaacaacttggttt 14107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 17916590 - 17916544
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  17916590 ggcttaatatatgctttggtcccttaacttatttttgaatttcattt 17916544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 19230678 - 19230720
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  19230678 cttggaaggagctccttgccactggagcccaaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 27440295 - 27440250
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||    
T  27440295 gcttaatacatcatttggtcccttaacttatttttgaatttcattt 27440250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 28225421 - 28225465
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  28225421 cttaatacatgctttggtcccttaacttattttcgaatttcattt 28225465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 2138759 - 2138712
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||||||||||| ||||| ||||||||| |||| ||||    
T  2138759 aggcttaatacatgttttggtcccttaatttatttttggattttattt 2138712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2271422 - 2271465
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || ||||||||||| |||||||||||    
T  2271422 cttggaaggagctccttgccactggagcccaagcaacttggttt 2271465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8612095 - 8612138
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || |||||| ||||||||||||||||    
T  8612095 cttggaaggagctccttgccactggagtccaaacaacttggttt 8612138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 9179857 - 9179900
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||| ||||||||| || |||||||||||||||||||||||    
T  9179857 cttggaatgagctccttgccactggagcccaaacaacttggttt 9179900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Original strand, 17915707 - 17915750
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| ||||||| || ||||||||||||||||||||||    
T  17915707 ttaatacatgctttggtccctcaacttatttttgaatttcattt 17915750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 17915957 - 17915910
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||| ||||||| ||||||| || ||||||||||||||||||||||    
T  17915957 aggcttcatacatgctttggtccctcaacttatttttgaatttcattt 17915910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 18773648 - 18773695
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| |||| || ||||||||||||||| |||||||||    
T  18773648 aggcttaatacatgctttgatcccttaacttatttttggatttcattt 18773695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 21749332 - 21749289
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||| |||| || |||||||||||||||||||||||||    
T  21749332 ttaatacatgctttgatcccttaacttatttttgaatttcattt 21749289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 3030739 - 3030781
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||| ||||||||| || ||||||||||||||||||||||    
T  3030739 cttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 19367712 - 19367758
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||| ||| ||||||||||||| |||||||||||    
T  19367712 ggcttaatacatgctttcgtcccttaacttattttcgaatttcattt 19367758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 19368639 - 19368593
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  19368639 ggcttaatacatgctttggtcccttaacttattttcggatttcattt 19368593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 21898637 - 21898595
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  21898637 cttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 289
Target Start/End: Original strand, 26581948 - 26581994
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  26581948 ggcttagtacatgttttggtcccttaacttatttttggattttattt 26581994  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 32048440 - 32048402
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaactt 56  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  32048440 cttggaaggagctccttaccactggagtccaaacaactt 32048402  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 8938699 - 8938658
Alignment:
Q  19 ttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||  | ||||||||||||||||||||||    
T  8938699 ttggaaggagctccttgtcactggagcccaaacaacttggtt 8938658  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 21016874 - 21016914
Alignment:
Q  20 tggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||| || ||||||||||| ||||||||||    
T  21016874 tggaaggagctccttgccactggagcccaagcaacttggtt 21016914  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 20704 - 20662
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  20704 aggcttaatacatgttttggtcccttaacatatttttgaattt 20662  T

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Target: scaffold0064; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 286
Target Start/End: Original strand, 20389 - 20429
Alignment:
Q  246 ttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||||||| || ||||| ||||||||||||||||    
T  20389 ttaatacatgttttgatcccttaatttatttttgaatttca 20429  T

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Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 8831 - 8873
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  8831 cttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 289
Target Start/End: Original strand, 47066 - 47111
Alignment:
Q  244 gcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||    
T  47066 gcttaatacatcatttggtcccttaacttatttttgaatttcattt 47111  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Complemental strand, 11893 - 11857
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttattttt 278  Q
    |||||||||||||| ||||||||||||||||||||||    
T  11893 aggcttaatacatgctttggtctcttaacttattttt 11857  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 25919 - 25963
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||||||||| ||||||| ||||||||||||| |||||||||||    
T  25919 cttaatacatgctttggtcccttaacttattttcgaatttcattt 25963  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 41030 - 40990
Alignment:
Q  20 tggaaggagctccttaccgctggagcccaaacaacttggtt 60  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  41030 tggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

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Target: scaffold0630 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 3174 - 3127
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    ||||| |||||||| |||||||  ||||||||||||||||||||||||    
T  3174 aggctcaatacatgctttggtcctttaacttatttttgaatttcattt 3127  T

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Target: scaffold0178 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 2387 - 2340
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| |||||||||||||||  ||||||||    
T  2387 aggcttaatacatgctttggtcccttaacttatttttggttttcattt 2340  T

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Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Original strand, 1207 - 1243
Alignment:
Q  243 ggcttaatacatgttttggtctcttaacttatttttg 279  Q
    |||||||||||||||||| || |||||||||||||||    
T  1207 ggcttaatacatgttttgatcccttaacttatttttg 1243  T

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Target: scaffold0177 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Original strand, 1749 - 1796
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||||    
T  1749 aggcttaatacatgctttggtcccttaacttattttcggatttcattt 1796  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 2102 - 2055
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaatttcattt 289  Q
    |||||||||||||| ||||||| || |||||| |||||||||||||||    
T  2102 aggcttaatacatgctttggtccctcaacttaattttgaatttcattt 2055  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 68505 - 68462
Alignment:
Q  18 cttggaaggagctccttaccgctggagcccaaacaacttggttt 61  Q
    ||||||||||||||||| || || ||||||||||||||||||||    
T  68505 cttggaaggagctccttgccactagagcccaaacaacttggttt 68462  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 5163 - 5205
Alignment:
Q  242 aggcttaatacatgttttggtctcttaacttatttttgaattt 284  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||    
T  5163 aggcttaatacatgctttggtcccttaacttatttttggattt 5205  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 40020 - 39979
Alignment:
Q  245 cttaatacatgttttggtctcttaacttatttttgaatttca 286  Q
    ||||||||||  ||||||||||||||||||||||| ||||||    
T  40020 cttaatacattatttggtctcttaacttatttttggatttca 39979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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